Galm (galactose mutarotase) - Rat Genome Database

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Gene: Galm (galactose mutarotase) Rattus norvegicus
Analyze
Symbol: Galm
Name: galactose mutarotase
RGD ID: 1359459
Description: Predicted to enable aldose 1-epimerase activity. Predicted to be involved in galactose catabolic process via UDP-galactose and glucose metabolic process. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in galactosemia. Orthologous to human GALM (galactose mutarotase); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: aldose 1-epimerase; galactose mutarotase (aldose 1-epimerase); MGC93738
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2614,837,540 - 14,889,484 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl614,837,548 - 14,889,310 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx615,135,882 - 15,187,744 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0615,458,146 - 15,509,901 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0614,954,424 - 15,006,178 (-)NCBIRnor_WKY
Rnor_6.062,808,988 - 2,860,742 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl62,808,841 - 2,860,744 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.062,785,889 - 2,837,635 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.463,024,123 - 3,078,720 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.163,024,122 - 3,078,719 (+)NCBI
Celera614,514,739 - 14,566,190 (-)NCBICelera
Cytogenetic Map6q11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
(-)-epigallocatechin 3-gallate  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4-dinitrotoluene  (EXP)
3-chloropropane-1,2-diol  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-\{[(5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)carbonyl]amino\}benzoic acid  (ISO)
acetamide  (EXP)
acrylamide  (EXP,ISO)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
benzoates  (ISO)
bisphenol A  (EXP,ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
calcitriol  (ISO)
carbon nanotube  (ISO)
CGP 52608  (ISO)
choline  (ISO)
cisplatin  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
dextran sulfate  (ISO)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP,ISO)
doxorubicin  (ISO)
endosulfan  (EXP)
epoxiconazole  (ISO)
fenthion  (ISO)
fenvalerate  (EXP)
flutamide  (EXP,ISO)
folic acid  (ISO)
genistein  (ISO)
gentamycin  (EXP)
glafenine  (EXP)
hydrogen peroxide  (ISO)
L-methionine  (ISO)
lipopolysaccharide  (ISO)
lithium atom  (EXP)
lithium hydride  (EXP)
menadione  (ISO)
methapyrilene  (EXP)
methylmercury chloride  (ISO)
N-methyl-4-phenylpyridinium  (EXP)
nefazodone  (EXP)
nickel atom  (ISO)
nimesulide  (EXP)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (ISO)
potassium chromate  (ISO)
progesterone  (ISO)
quercetin  (ISO)
rotenone  (EXP,ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
tert-butyl hydroperoxide  (ISO)
tetrachloromethane  (EXP,ISO)
thalidomide  (ISO)
thioacetamide  (EXP)
trichloroethene  (EXP)
Triptolide  (EXP)
valdecoxib  (EXP)
valproic acid  (ISO)
vancomycin  (ISO)
vinclozolin  (EXP)
Yessotoxin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
4. GOA pipeline RGD automated data pipeline
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
6. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
7. Identification and characterisation of human aldose 1-epimerase. Timson DJ and Reece RJ, FEBS Lett 2003 May 22;543(1-3):21-4.
Additional References at PubMed
PMID:15489334   PMID:19056867   PMID:23376485  


Genomics

Comparative Map Data
Galm
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2614,837,540 - 14,889,484 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl614,837,548 - 14,889,310 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx615,135,882 - 15,187,744 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0615,458,146 - 15,509,901 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0614,954,424 - 15,006,178 (-)NCBIRnor_WKY
Rnor_6.062,808,988 - 2,860,742 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl62,808,841 - 2,860,744 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.062,785,889 - 2,837,635 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.463,024,123 - 3,078,720 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.163,024,122 - 3,078,719 (+)NCBI
Celera614,514,739 - 14,566,190 (-)NCBICelera
Cytogenetic Map6q11NCBI
GALM
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38238,666,114 - 38,734,765 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl238,666,081 - 38,741,237 (+)EnsemblGRCh38hg38GRCh38
GRCh37238,893,256 - 38,961,907 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36238,746,743 - 38,815,049 (+)NCBINCBI36Build 36hg18NCBI36
Build 34238,804,889 - 38,873,176NCBI
Celera238,734,098 - 38,802,942 (+)NCBICelera
Cytogenetic Map2p22.1NCBI
HuRef238,632,684 - 38,700,744 (+)NCBIHuRef
CHM1_1238,823,545 - 38,892,563 (+)NCBICHM1_1
T2T-CHM13v2.0238,672,993 - 38,743,547 (+)NCBIT2T-CHM13v2.0
Galm
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391780,434,886 - 80,492,461 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1780,434,900 - 80,492,530 (+)EnsemblGRCm39 Ensembl
GRCm381780,127,458 - 80,185,032 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1780,127,471 - 80,185,101 (+)EnsemblGRCm38mm10GRCm38
MGSCv371780,526,811 - 80,584,372 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361780,035,797 - 80,093,358 (+)NCBIMGSCv36mm8
Celera1784,443,907 - 84,501,487 (+)NCBICelera
Cytogenetic Map17E3NCBI
Galm
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554416,330,410 - 6,403,219 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554416,330,520 - 6,399,522 (+)NCBIChiLan1.0ChiLan1.0
GALM
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A39,456,786 - 39,527,119 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A39,456,786 - 39,527,116 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A38,697,338 - 38,770,470 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
GALM
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11730,741,990 - 30,793,456 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1730,742,127 - 30,792,465 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1730,558,189 - 30,609,682 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01731,397,079 - 31,448,378 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1731,397,221 - 31,447,503 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11730,619,873 - 30,671,292 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01730,689,932 - 30,741,032 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01730,902,711 - 30,953,995 (+)NCBIUU_Cfam_GSD_1.0
LOC101967759
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629241,066,829 - 41,333,563 (-)NCBIHiC_Itri_2
SpeTri2.0NW_00493650812,495,438 - 12,502,236 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GALM
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3101,617,526 - 101,753,125 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13101,617,521 - 101,682,821 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23107,762,128 - 107,827,418 (-)NCBISscrofa10.2Sscrofa10.2susScr3
GALM
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11468,647,287 - 68,720,735 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1468,647,297 - 68,720,739 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604543,259,741 - 43,332,630 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Galm
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473820,163,901 - 20,235,256 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473820,164,179 - 20,236,151 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Galm
294 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:140
Count of miRNA genes:102
Interacting mature miRNAs:130
Transcripts:ENSRNOT00000009221
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
738023Alc17Alcohol consumption QTL 173.10.003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)6127574569Rat
1354616Despr12Despair related QTL 120.0012locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)6127574569Rat
1549905Stresp10Stress response QTL 106.830.0066stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)6127574569Rat
2300176Bmd51Bone mineral density QTL 5111.70.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)6127574569Rat
2300190Bmd52Bone mineral density QTL 5211.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)6127574569Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)6134235784Rat
1578758Tcas9Tongue tumor susceptibility QTL 93.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)6137618905Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6139036266Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6141223769Rat
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6141223769Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6141223769Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6141223769Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6142487980Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6142487980Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6142487980Rat
7411584Foco4Food consumption QTL 44.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6142838846Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6143394190Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat
2293706Bmd20Bone mineral density QTL 204.30.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)6507449719988050Rat
1300128Rf16Renal function QTL 163.89renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449734434305Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
1358190Ept1Estrogen-induced pituitary tumorigenesis QTL 14.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6984331220338915Rat
2292616Ept15Estrogen-induced pituitary tumorigenesis QTL 154.4pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)6984331220338915Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)61173566972593685Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)61173566972593685Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat

Markers in Region
RH129850  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2614,837,767 - 14,837,966 (-)MAPPERmRatBN7.2
Rnor_6.062,860,316 - 2,860,514NCBIRnor6.0
Rnor_5.062,837,209 - 2,837,407UniSTSRnor5.0
RGSC_v3.463,078,294 - 3,078,492UniSTSRGSC3.4
Celera614,514,967 - 14,515,165UniSTS
Cytogenetic Map6q11UniSTS
AA892666  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2614,838,019 - 14,838,207 (-)MAPPERmRatBN7.2
Rnor_6.062,860,075 - 2,860,262NCBIRnor6.0
Rnor_5.062,836,968 - 2,837,155UniSTSRnor5.0
RGSC_v3.463,078,053 - 3,078,240UniSTSRGSC3.4
Celera614,515,219 - 14,515,406UniSTS
RH 3.4 Map665.3UniSTS
Cytogenetic Map6q11UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 16 49 37 11 37 23 35 34 11
Low 27 8 4 8 4 8 11 51 7 8
Below cutoff

Sequence


Reference Sequences
RefSeq Acc Id: ENSRNOT00000009221   ⟹   ENSRNOP00000009221
RefSeq Status:
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl614,837,548 - 14,889,310 (-)Ensembl
Rnor_6.0 Ensembl62,808,841 - 2,860,744 (+)Ensembl
RefSeq Acc Id: NM_001007704   ⟹   NP_001007705
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2614,837,540 - 14,889,283 (-)NCBI
Rnor_6.062,808,988 - 2,860,742 (+)NCBI
Rnor_5.062,785,889 - 2,837,635 (+)NCBI
RGSC_v3.463,024,123 - 3,078,720 (+)RGD
Celera614,514,739 - 14,566,190 (-)RGD
Sequence:
RefSeq Acc Id: XR_005505502
RefSeq Status:
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2614,841,293 - 14,889,484 (-)NCBI
RefSeq Acc Id: XR_005505503
RefSeq Status:
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2614,839,589 - 14,889,484 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001007705 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH81876 (Get FASTA)   NCBI Sequence Viewer  
  EDM02781 (Get FASTA)   NCBI Sequence Viewer  
  Q66HG4 (Get FASTA)   NCBI Sequence Viewer  
Reference Sequences
RefSeq Acc Id: NP_001007705   ⟸   NM_001007704
- UniProtKB: Q66HG4 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSRNOP00000009221   ⟸   ENSRNOT00000009221

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q66HG4-F1-model_v2 AlphaFold Q66HG4 1-342 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694363
Promoter ID:EPDNEW_R4888
Type:multiple initiation site
Name:Galm_1
Description:galactose mutarotase
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.062,808,995 - 2,809,055EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1359459 AgrOrtholog
BioCyc Gene G2FUF-38520 BioCyc
Ensembl Genes ENSRNOG00000007023 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSRNOP00000009221 ENTREZGENE
  ENSRNOP00000009221.5 UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000009221 ENTREZGENE
  ENSRNOT00000009221.7 UniProtKB/TrEMBL
Gene3D-CATH 2.70.98.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7107751 IMAGE-MGC_LOAD
InterPro Ald1_epimerase_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Aldose_1-epimerase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Aldose_1/G6P_1-epimerase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Gal_mutarotase_sf_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GH-type_carb-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:313843 UniProtKB/Swiss-Prot
MGC_CLONE MGC:93738 IMAGE-MGC_LOAD
NCBI Gene 313843 ENTREZGENE
Pfam Aldose_epim UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Galm PhenoGen
PIRSF GALM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ALDOSE_1_EPIMERASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF74650 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8L2Q447_RAT UniProtKB/TrEMBL
  GALM_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-06-01 Galm  galactose mutarotase  Galm  galactose mutarotase (aldose 1-epimerase)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-10-17 Galm  galactose mutarotase (aldose 1-epimerase)  Galm  galactose mutarotase  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-11-17 Galm  galactose mutarotase      Name updated 1299863 APPROVED
2005-07-29 Galm  galactose mutarotase (aldose 1-epimerase)      Symbol and Name status set to provisional 70820 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
gene_other human homolog shows a preference for galactose over glucose 1556538