Abhd1 (abhydrolase domain containing 1) - Rat Genome Database

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Gene: Abhd1 (abhydrolase domain containing 1) Rattus norvegicus
Analyze
Symbol: Abhd1
Name: abhydrolase domain containing 1
RGD ID: 1310988
Description: Predicted to enable acetylesterase activity and monoacylglycerol lipase activity. Predicted to be involved in medium-chain fatty acid biosynthetic process and medium-chain fatty acid catabolic process. Predicted to be located in membrane. Orthologous to human ABHD1 (abhydrolase domain containing 1); INTERACTS WITH (+)-schisandrin B; 2,2',4,4'-Tetrabromodiphenyl ether; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: abhydrolase domain-containing protein 1; alpha/beta hydrolase domain containing protein 1; alpha/beta hydrolase domain-containing protein 1; LOC313917; MGC105659
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8631,142,476 - 31,147,464 (-)NCBIGRCr8
mRatBN7.2625,422,526 - 25,427,514 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl625,422,526 - 25,427,514 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx625,722,841 - 25,727,828 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0626,038,705 - 26,043,692 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0625,517,888 - 25,522,871 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0626,787,807 - 26,792,795 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl626,784,058 - 26,792,808 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0636,603,422 - 36,608,410 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4625,405,493 - 25,410,481 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1625,408,445 - 25,413,434 (-)NCBI
Celera624,913,248 - 24,918,236 (-)NCBICelera
Cytogenetic Map6q14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (EXP)
1,2-dimethylhydrazine  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (EXP)
2,6-dinitrotoluene  (EXP)
3,4-methylenedioxymethamphetamine  (EXP,ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (EXP)
6-propyl-2-thiouracil  (EXP)
aflatoxin B1  (ISO)
amiodarone  (EXP)
arsenous acid  (ISO)
benzbromarone  (EXP)
benzo[a]pyrene  (ISO)
bisphenol A  (EXP,ISO)
cadmium dichloride  (EXP,ISO)
carbon nanotube  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
clofibrate  (EXP,ISO)
cocaine  (ISO)
Cuprizon  (EXP)
dexamethasone  (EXP)
diarsenic trioxide  (ISO)
dichloroacetic acid  (ISO)
ethylparaben  (ISO)
flutamide  (EXP)
fulvestrant  (ISO)
furan  (EXP)
gentamycin  (EXP)
glafenine  (EXP)
kojic acid  (ISO)
L-ethionine  (EXP)
leflunomide  (EXP)
levofloxacin  (EXP)
methotrexate  (ISO)
Muraglitazar  (EXP)
N-nitrosodiethylamine  (ISO)
nefazodone  (EXP)
niclosamide  (ISO)
omeprazole  (EXP)
p-toluidine  (EXP)
paracetamol  (EXP)
parathion  (ISO)
PCB138  (ISO)
perfluorooctanoic acid  (EXP)
permethrin  (ISO)
phenobarbital  (ISO)
pirinixic acid  (EXP,ISO)
resveratrol  (ISO)
rotenone  (EXP)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
sunitinib  (ISO)
Tesaglitazar  (EXP)
testosterone  (EXP)
tetrachloromethane  (EXP)
thioacetamide  (EXP)
trichloroethene  (EXP)
triphenyl phosphate  (EXP)
vancomycin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
membrane  (IEA)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. GOA pipeline RGD automated data pipeline
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
4. Comprehensive gene review and curation RGD comprehensive gene curation
Additional References at PubMed
PMID:12477932   PMID:15489334  


Genomics

Comparative Map Data
Abhd1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8631,142,476 - 31,147,464 (-)NCBIGRCr8
mRatBN7.2625,422,526 - 25,427,514 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl625,422,526 - 25,427,514 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx625,722,841 - 25,727,828 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0626,038,705 - 26,043,692 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0625,517,888 - 25,522,871 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0626,787,807 - 26,792,795 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl626,784,058 - 26,792,808 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0636,603,422 - 36,608,410 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4625,405,493 - 25,410,481 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1625,408,445 - 25,413,434 (-)NCBI
Celera624,913,248 - 24,918,236 (-)NCBICelera
Cytogenetic Map6q14NCBI
ABHD1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38227,123,815 - 27,130,812 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl227,123,789 - 27,130,812 (+)EnsemblGRCh38hg38GRCh38
GRCh37227,346,683 - 27,353,680 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36227,200,161 - 27,207,184 (+)NCBINCBI36Build 36hg18NCBI36
Build 34227,258,307 - 27,265,329NCBI
Celera227,192,963 - 27,199,985 (+)NCBICelera
Cytogenetic Map2p23.3NCBI
HuRef227,088,820 - 27,095,530 (+)NCBIHuRef
CHM1_1227,276,604 - 27,283,604 (+)NCBICHM1_1
T2T-CHM13v2.0227,165,161 - 27,172,457 (+)NCBIT2T-CHM13v2.0
Abhd1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39531,107,410 - 31,112,439 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl531,107,410 - 31,112,435 (+)EnsemblGRCm39 Ensembl
GRCm38530,950,066 - 30,955,095 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl530,950,066 - 30,955,091 (+)EnsemblGRCm38mm10GRCm38
MGSCv37531,252,439 - 31,257,468 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36531,226,653 - 31,231,672 (+)NCBIMGSCv36mm8
Celera528,429,859 - 28,434,894 (+)NCBICelera
Cytogenetic Map5B1NCBI
cM Map516.9NCBI
Abhd1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554699,092,051 - 9,100,652 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554699,092,074 - 9,097,635 (+)NCBIChiLan1.0ChiLan1.0
ABHD1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21299,384,754 - 99,391,967 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A99,388,722 - 99,395,935 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A27,122,572 - 27,129,787 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A27,211,963 - 27,219,013 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A27,211,963 - 27,219,013 (+)Ensemblpanpan1.1panPan2
ABHD1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11721,105,686 - 21,116,467 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1721,110,808 - 21,116,465 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1720,997,511 - 21,008,292 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01721,426,382 - 21,437,174 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1721,431,513 - 21,437,172 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11721,113,115 - 21,123,897 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01721,124,236 - 21,135,008 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01721,171,072 - 21,181,857 (+)NCBIUU_Cfam_GSD_1.0
Abhd1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629265,410,365 - 65,419,473 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364935,420,158 - 5,429,682 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364935,420,091 - 5,429,304 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ABHD1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl3111,996,142 - 112,002,132 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.13111,996,138 - 112,002,127 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23118,994,624 - 119,000,603 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ABHD1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11480,488,851 - 80,495,723 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1480,489,099 - 80,494,592 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604531,644,632 - 31,650,179 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Abhd1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247389,223,807 - 9,233,737 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247389,223,949 - 9,229,336 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Abhd1
24 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:34
Count of miRNA genes:31
Interacting mature miRNAs:34
Transcripts:ENSRNOT00000010403
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
8552962Pigfal16Plasma insulin-like growth factor 1 level QTL 169.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)6141223769Rat
1549905Stresp10Stress response QTL 106.830.0066stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)6127574569Rat
10401812Kidm54Kidney mass QTL 54kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1331743Uae28Urinary albumin excretion QTL 284.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)6134235784Rat
2292589Emca10Estrogen-induced mammary cancer QTL 100.048mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)61653614061536140Rat
10401800Kidm49Kidney mass QTL 49kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)61436878859368788Rat
1300164Rf15Renal function QTL 153.12renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449754641141Rat
9589129Insul24Insulin level QTL 2419.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)6141223769Rat
1578758Tcas9Tongue tumor susceptibility QTL 93.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)6137618905Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
7411603Foco13Food consumption QTL 135.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6141223769Rat
1598843Cm63Cardiac mass QTL 632.6heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)6139036266Rat
738024Sach5Saccharine consumption QTL 53.90.00039consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)6143394190Rat
7411542Bw127Body weight QTL 1275.50.001body mass (VT:0001259)body weight gain (CMO:0000420)6141223769Rat
9589048Scfw3Subcutaneous fat weight QTL 34.570.001subcutaneous adipose mass (VT:1000472)abdominal subcutaneous fat pad weight (CMO:0002069)6141223769Rat
738023Alc17Alcohol consumption QTL 173.10.003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)6127574569Rat
1354616Despr12Despair related QTL 120.0012locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)6127574569Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
2293709Bss23Bone structure and strength QTL 235.180.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)6142487980Rat
2293650Bss31Bone structure and strength QTL 315.050.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)6142487980Rat
7411584Foco4Food consumption QTL 44.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)6142838846Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)61173566972593685Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
2300176Bmd51Bone mineral density QTL 5111.70.0001femur mineral mass (VT:0010011)bone mineral density (CMO:0001226)6127574569Rat
1300128Rf16Renal function QTL 163.89renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)6507449734434305Rat
1641898Colcr4Colorectal carcinoma resistance QTL43.710.0007intestine integrity trait (VT:0010554)well differentiated malignant colorectal tumor surface area measurement (CMO:0002077)62033877762613667Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)61173566972593685Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat
2293656Bss28Bone structure and strength QTL 286.790.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)6142487980Rat
1359023Bp272Blood pressure QTL 2722.5arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)61653614027261739Rat
1354664Slep2Serum leptin concentration QTL 24.49blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)61653614071636405Rat
2300190Bmd52Bone mineral density QTL 5211.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)6127574569Rat

Markers in Region
RH136976  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2625,422,403 - 25,422,554 (+)MAPPERmRatBN7.2
Rnor_6.0626,787,685 - 26,787,835NCBIRnor6.0
Rnor_5.0636,603,300 - 36,603,450UniSTSRnor5.0
RGSC_v3.4625,405,371 - 25,405,521UniSTSRGSC3.4
Celera624,913,126 - 24,913,276UniSTS
RH 3.4 Map692.7UniSTS
Cytogenetic Map6q14UniSTS
BQ198731  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2625,425,964 - 25,426,167 (+)MAPPERmRatBN7.2
Rnor_6.0626,791,246 - 26,791,448NCBIRnor6.0
Rnor_5.0636,606,861 - 36,607,063UniSTSRnor5.0
RGSC_v3.4625,408,932 - 25,409,134UniSTSRGSC3.4
Celera624,916,687 - 24,916,889UniSTS
RH 3.4 Map6120.08UniSTS
Cytogenetic Map6q14UniSTS


Expression

RNA-SEQ Expression

alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31

Sequence


Ensembl Acc Id: ENSRNOT00000010403   ⟹   ENSRNOP00000009339
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl625,422,526 - 25,427,514 (-)Ensembl
Rnor_6.0 Ensembl626,784,058 - 26,792,808 (-)Ensembl
RefSeq Acc Id: NM_001008520   ⟹   NP_001008520
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8631,142,476 - 31,147,464 (-)NCBI
mRatBN7.2625,422,526 - 25,427,514 (-)NCBI
Rnor_6.0626,787,807 - 26,792,795 (-)NCBI
Rnor_5.0636,603,422 - 36,608,410 (-)NCBI
RGSC_v3.4625,405,493 - 25,410,481 (-)RGD
Celera624,913,248 - 24,918,236 (-)RGD
Sequence:
RefSeq Acc Id: XM_039112176   ⟹   XP_038968104
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8631,142,476 - 31,144,220 (-)NCBI
mRatBN7.2625,422,526 - 25,424,273 (-)NCBI
RefSeq Acc Id: XM_063261874   ⟹   XP_063117944
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8631,142,476 - 31,144,074 (-)NCBI
RefSeq Acc Id: NP_001008520   ⟸   NM_001008520
- UniProtKB: Q5RK23 (UniProtKB/Swiss-Prot),   A6HAA3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000009339   ⟸   ENSRNOT00000010403
RefSeq Acc Id: XP_038968104   ⟸   XM_039112176
- Peptide Label: isoform X1
- UniProtKB: A6HAA4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063117944   ⟸   XM_063261874
- Peptide Label: isoform X1
- UniProtKB: A6HAA4 (UniProtKB/TrEMBL)
Protein Domains
AB hydrolase-1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q5RK23-F1-model_v2 AlphaFold Q5RK23 1-412 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

Promoters
RGD ID:13694451
Promoter ID:EPDNEW_R4975
Type:initiation region
Name:Abhd1_1
Description:abhydrolase domain containing 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0626,792,792 - 26,792,852EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1310988 AgrOrtholog
BioCyc Gene G2FUF-38336 BioCyc
Ensembl Genes ENSRNOG00000025689 Ensembl, UniProtKB/Swiss-Prot
  ENSRNOG00055018844 UniProtKB/Swiss-Prot
  ENSRNOG00060011074 UniProtKB/Swiss-Prot
  ENSRNOG00065023212 UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000010403.5 UniProtKB/Swiss-Prot
  ENSRNOT00055032107 UniProtKB/Swiss-Prot
  ENSRNOT00060018743 UniProtKB/Swiss-Prot
  ENSRNOT00065039647 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.1820 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
IMAGE_CLONE IMAGE:7302778 IMAGE-MGC_LOAD
InterPro AB_hydrolase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AB_hydrolase_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AB_hydrolase_4_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABHD4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:313917 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGC_CLONE MGC:105659 IMAGE-MGC_LOAD
NCBI Gene 313917 ENTREZGENE
PANTHER ABHYDROLASE DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN ABHD1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Abhydrolase_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Abhd1 PhenoGen
PIRSF Ab_hydro_YheT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000025689 RatGTEx
  ENSRNOG00055018844 RatGTEx
  ENSRNOG00060011074 RatGTEx
  ENSRNOG00065023212 RatGTEx
Superfamily-SCOP alpha/beta-Hydrolases UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
UniProt A6HAA3 ENTREZGENE, UniProtKB/TrEMBL
  A6HAA4 ENTREZGENE, UniProtKB/TrEMBL
  ABHD1_RAT UniProtKB/Swiss-Prot, ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2005-12-06 Abhd1  abhydrolase domain containing 1  Abhd1_predicted  abhydrolase domain containing 1 (predicted)  Symbol and Name updated 1559027 APPROVED
2005-01-12 Abhd1_predicted  abhydrolase domain containing 1 (predicted)      Symbol and Name status set to approved 70820 APPROVED