Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References FTP Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner
Aging & Age-Related Disease Cancer Cardiovascular Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Genetic Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: Foxn2 (forkhead box N2) Rattus norvegicus
Analyze
Symbol: Foxn2
Name: forkhead box N2
Description: Predicted to have DNA-binding transcription factor activity and sequence-specific DNA binding activity. Predicted to be involved in skeletal muscle cell differentiation. Predicted to localize to the nucleus. Orthologous to human FOXN2 (forkhead box N2); INTERACTS WITH 6-propyl-2-thiouracil; 2,3,7,8-tetrachlorodibenzodioxine (ortholog); 2-hydroxypropanoic acid (ortholog).
Type: protein-coding
RefSeq Status: MODEL
Also known as: forkhead box protein N2; LOC301676; RGD1562291; similar to Human T-cell leukemia virus enhancer factor (Forkhead box protein N2)
Orthologs:
Homo sapiens (human) : FOXN2 (forkhead box N2)  HGNC  Alliance
Mus musculus (house mouse) : Foxn2 (forkhead box N2)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Foxn2 (forkhead box N2)
Pan paniscus (bonobo/pygmy chimpanzee) : FOXN2 (forkhead box N2)
Canis lupus familiaris (dog) : FOXN2 (forkhead box N2)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Foxn2 (forkhead box N2)
Sus scrofa (pig) : FOXN2 (forkhead box N2)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0612,158,127 - 12,205,450 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0622,124,363 - 22,170,775 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4612,267,384 - 12,278,896 (+)NCBIRGSC3.4rn4RGSC3.4
Celera65,788,949 - 5,835,379 (-)NCBICelera
Cytogenetic Map6q12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
  
More on Foxn2
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1562291
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



Contact Us |  About Us |  License CC BY 4.0 |  Legal Disclaimer |  © Medical College of Wisconsin
NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.