| 2624 | Fn1 | fibronectin 1 | ENCODES a protein that exhibits mercury ion binding; protease binding; identical protein binding (ortholog); INVOLVED IN cell-matrix adhesion; cellular response to amyloid-beta; cellular response to angiotensin; PARTICIPATES IN syndecan signaling pathway; cell-extracellular matrix signaling pathway; Entamoebiasis pathway; ASSOCIATED WITH acute kidney failure; Binge Drinking; calcium oxalate nephrolithiasis; FOUND IN basement membrane; extracellular space; apical plasma membrane (ortholog); INTERACTS WITH (R)-lipoic acid; 1-(5-isoquinolinesulfonyl)-2-methylpiperazine; 17alpha-ethynylestradiol | 9 | 80645507 | 80714200 | Rat | 1016 | symbol , PhenoGen , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 10594 | Fn1 | fibronectin 1 | Enables peptidase activator activity and receptor ligand activity. Involved in negative regulation of monocyte activation and response to muscle activity. Acts upstream of or within several processes, including calcium-independent cell-matrix adhesion; integrin-mediated signaling pathway; and positi ve regulation of axon extension. Located in apical plasma membrane; basement membrane; and collagen-containing extracellular matrix. Is active in extracellular space. Is expressed in several structures, including alimentary system; cardiovascular system; egg cylinder; embryo mesenchyme; and genitourinary system. Human ortholog(s) of this gene implicated in calcium oxalate nephrolithiasis; membranoproliferative glomerulonephritis; and spondylometaphyseal dysplasia corner fracture type. Orthologous to human FN1 (fibronectin 1). [provided by Alliance of Genome Resources, Apr 2025] | 1 | 71624632 | 71692439 | Mouse | 1100 | symbol , PhenoGen , description , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 736627 | FN1 | fibronectin 1 | This gene encodes fibronectin, a glycoprotein present in a soluble dimeric form in plasma, and in a dimeric or multimeric form at the cell surface and in extracellular matrix. The encoded preproprotein is proteolytically processed to generate the mature protein. Fibronectin is involved in cell adhes ion and migration processes including embryogenesis, wound healing, blood coagulation, host defense, and metastasis. The gene has three regions subject to alternative splicing, with the potential to produce 20 different transcript variants, at least one of which encodes an isoform that undergoes proteolytic processing. The full-length nature of some variants has not been determined. [provided by RefSeq, Jan 2016] | 2 | 215360865 | 215436068 | Human | 1217 | symbol , COSMIC , Human Proteome Map , old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 12312137 | FN1 | fibronectin 1 | ENCODES a protein that exhibits mercury ion binding (ortholog); protease binding (ortholog); INVOLVED IN calcium-independent cell-matrix adhesion (ortholog); cell adhesion (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute kidney failure (o rtholog); Acute Otitis Media (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) | 37 | 22456854 | 22522410 | Dog | 160 | symbol , old_gene_symbol | gene, protein-coding, MODEL [RefSeq] |
| 733764 | Itgb1 | integrin beta 1 (fibronectin receptor beta) | Enables integrin binding activity involved in cell-matrix adhesion and signaling receptor activity. Contributes to laminin binding activity. Involved in several processes, including basement membrane organization; cellular response to low-density lipoprotein particle stimulus; and regulation of syna pse pruning. Acts upstream of or within with a negative effect on reactive gliosis and regulation of spontaneous synaptic transmission. Acts upstream of or within several processes, including circulatory system development; neuron projection morphogenesis; and regulation of transmembrane transport. Located in several cellular components, including intercalated disc; myelin sheath abaxonal region; and sarcolemma. Part of integrin alpha7-beta1 complex and integrin alpha9-beta1 complex. Is active in Schaffer collateral - CA1 synapse; cerebellar climbing fiber to Purkinje cell synapse; and synaptic membrane. Colocalizes with cytoplasmic vesicle; perinuclear region of cytoplasm; and plasma membrane. Is expressed in several structures, including alimentary system; brain; eye; genitourinary system; and heart. Used to study Hirschsprung's disease. Orthologous to human ITGB1 (integrin subunit beta 1). [provided by Alliance of Genome Resources, Apr 2025] | 8 | 129412135 | 129460060 | Mouse | 1067 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 8845050 | Fn1 | fibronectin 1 | ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); mercury ion binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); calcium-independent cell-matrix adhesion (ortholog); cell adhesion (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Acute Otitis Media; acute kidney failure (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basement membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) | NW_004955457 | 629599 | 694948 | Chinchilla | 204 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 11696213 | FN1 | fibronectin 1 | ENCODES a protein that exhibits mercury ion binding (ortholog); protease binding (ortholog); INVOLVED IN calcium-independent cell-matrix adhesion (ortholog); cell adhesion (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute kidney failure (o rtholog); Acute Otitis Media (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) | 2B | 102623568 | 102698747 | Bonobo | 212 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12568365 | Fn1 | fibronectin 1 | ENCODES a protein that exhibits mercury ion binding (ortholog); protease binding (ortholog); INVOLVED IN calcium-independent cell-matrix adhesion (ortholog); cell adhesion (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute kidney failure (o rtholog); Acute Otitis Media (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) | NW_004936586 | 1708803 | 1773372 | Squirrel | 212 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 13923809 | FN1 | fibronectin 1 | ENCODES a protein that exhibits mercury ion binding (ortholog); protease binding (ortholog); INVOLVED IN calcium-independent cell-matrix adhesion (ortholog); cell adhesion (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute kidney failure (o rtholog); Acute Otitis Media (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular space (ortholog); INTERACTS WITH 4-methylumbelliferone; anthra[1,9-cd]pyrazol-6(2H)-one; arecoline | | | | Pig | 223 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18339264 | FN1 | fibronectin 1 | ENCODES a protein that exhibits mercury ion binding (ortholog); protease binding (ortholog); INVOLVED IN calcium-independent cell-matrix adhesion (ortholog); cell adhesion (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute kidney failure (o rtholog); Acute Otitis Media (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) | | | | Green Monkey | 211 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18931009 | Fn1 | fibronectin 1 | ENCODES a protein that exhibits identical protein binding (ortholog); mercury ion binding (ortholog); peptidase activator activity (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); calcium-independent cell-matrix adhesion (ortholog); cell adhesion (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Otitis Media (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basement membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) | | | | Naked Mole-Rat | 213 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 155249705 | fn1 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 625865444 | Fn1 | fibronectin 1 | ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); mercury ion binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); calcium-independent cell-matrix adhesion (ortholog); cell adhesion (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Otitis Media (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basement membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) | | | | Black Rat | 203 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 14376732 | fne | | | | | | Fly | | symbol | gene, null |
| 14389323 | fng | | | | | | Fly | | symbol | gene, null |
| 1350348 | FN3K | fructosamine 3 kinase | A high concentration of glucose can result in non-enzymatic oxidation of proteins by reaction of glucose and lysine residues (glycation). Proteins modified in this way, fructosamines, are less active or functional. This gene encodes an enzyme which catalyzes the phosphorylation of fructosamines whic h may result in deglycation. [provided by RefSeq, Feb 2012] | 17 | 82735615 | 82751196 | Human | 128 | symbol , old_gene_name , COSMIC , Human Proteome Map | gene, protein-coding, VALIDATED [RefSeq] |
| 1557210 | Fn3k | fructosamine 3 kinase | Enables protein-fructosamine 3-kinase activity. Involved in peptidyl-lysine deglycation. Acts upstream of or within fructosamine metabolic process. Is active in cytosol. Orthologous to human FN3K (fructosamine 3 kinase). [provided by Alliance of Genome Resources , Jul 2025] | 11 | 121325779 | 121341316 | Mouse | 131 | symbol , old_gene_name , PhenoGen , description | gene, protein-coding, VALIDATED [RefSeq] |
| 1559983 | Fn3k | fructosamine 3 kinase | ENCODES a protein that exhibits protein-fructosamine 3-kinase activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fructosamine metabolic process (ortholog); peptidyl-lysine deglycation (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); INTERACTS WITH (+)-schi sandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol | 10 | 107198566 | 107214176 | Rat | 126 | symbol , PhenoGen , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 8865513 | Fn3k | fructosamine 3 kinase | ENCODES a protein that exhibits protein-fructosamine 3-kinase activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fructosamine metabolic process (ortholog); peptidyl-lysine deglycation (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) | NW_004955506 | 434613 | 451063 | Chinchilla | 11 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 11863185 | FN3K | fructosamine 3 kinase | ENCODES a protein that exhibits ATP binding (inferred); kinase activity (inferred); nucleotide binding (inferred); INVOLVED IN fructosamine metabolic process (ortholog); peptidyl-lysine deglycation (ortholog); protein deglycation (ortholog); FOUND IN cytosol (inferred); mitochondrion (inferred) | 17 | 77154014 | 77169903 | Bonobo | 15 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12055229 | FN3K | fructosamine 3 kinase | ENCODES a protein that exhibits ATP binding (inferred); kinase activity (inferred); nucleotide binding (inferred); INVOLVED IN fructosamine metabolic process (ortholog); peptidyl-lysine deglycation (ortholog); protein deglycation (ortholog); FOUND IN cytosol (inferred); mitochondrion (inferred) | | | | Dog | 15 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12486512 | Fn3k | fructosamine 3 kinase | ENCODES a protein that exhibits ATP binding (inferred); kinase activity (inferred); nucleotide binding (inferred); INVOLVED IN fructosamine metabolic process (ortholog); peptidyl-lysine deglycation (ortholog); protein deglycation (ortholog); FOUND IN cytosol (inferred); mitochondrion (inferred) | NW_004936923 | 223632 | 235176 | Squirrel | 15 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 14287743 | FN3K | fructosamine 3 kinase | ENCODES a protein that exhibits protein-fructosamine 3-kinase activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fructosamine metabolic process (ortholog); peptidyl-lysine deglycation (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); INTERACTS WITH deoxyniv alenol | | | | Pig | 32 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18399335 | FN3K | fructosamine 3 kinase | ENCODES a protein that exhibits protein-fructosamine 3-kinase activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fructosamine metabolic process (ortholog); peptidyl-lysine deglycation (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) | | | | Green Monkey | 11 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18925875 | Fn3k | fructosamine 3 kinase | ENCODES a protein that exhibits protein-fructosamine 3-kinase activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fructosamine metabolic process (ortholog); peptidyl-lysine deglycation (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) | | | | Naked Mole-Rat | 18 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 20865792 | FN3K | fructosamine 3 kinase | ENCODES a protein that exhibits protein-fructosamine 3-kinase activity (inferred); INVOLVED IN epithelial cell differentiation (inferred); fructosamine metabolic process (inferred); FOUND IN cytosol (inferred); mitochondrion (inferred) | | | | Green Monkey | 5 | symbol | gene, protein-coding |
| 155248581 | fn3k | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 626017202 | Fn3k | fructosamine 3 kinase | ENCODES a protein that exhibits protein-fructosamine 3-kinase activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fructosamine metabolic process (ortholog); peptidyl-lysine deglycation (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) | | | | Black Rat | 11 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 2625 | Fnta | farnesyltransferase, CAAX box, subunit alpha | ENCODES a protein that exhibits CAAX-protein geranylgeranyltransferase activity; heterocyclic compound binding; peptide binding; INVOLVED IN negative regulation of apoptotic process; positive regulation of cell cycle; positive regulation of cell population proliferation; FOUND IN CAAX-protein gerany lgeranyltransferase complex; microtubule associated complex (ortholog); protein farnesyltransferase complex (ortholog); INTERACTS WITH (+)-schisandrin B; (S)-(-)-perillyl alcohol; 2,4-dinitrotoluene | 16 | 72767864 | 72786193 | Rat | 173 | symbol , PhenoGen | gene, protein-coding, PROVISIONAL [RefSeq] |
| 10595 | Fnta | farnesyltransferase, CAAX box, alpha | Enables Rab geranylgeranyltransferase activity; protein farnesyltransferase activity; and receptor tyrosine kinase binding activity. Involved in enzyme-linked receptor protein signaling pathway; positive regulation of Rac protein signal transduction; and positive regulation of skeletal muscle acetyl choline-gated channel clustering. Acts upstream of or within Rac protein signal transduction. Predicted to be part of CAAX-protein geranylgeranyltransferase complex; microtubule associated complex; and protein farnesyltransferase complex. Predicted to be active in cytoplasm. Is expressed in several structures, including adipose tissue; alimentary system; brain; hemolymphoid system gland; and reproductive system. Orthologous to human FNTA (farnesyltransferase, CAAX box, subunit alpha). [provided by Alliance of Genome Resources, Jul 2025] | 8 | 26488716 | 26505638 | Mouse | 184 | symbol , PhenoGen , description | gene, protein-coding, VALIDATED [RefSeq] |
| 730816 | FNTA | farnesyltransferase, CAAX box, subunit alpha | Prenyltransferases can attach either a farnesyl group or a geranylgeranyl group in thioether linkage to the cysteine residue of proteins with a C-terminal CAAX box. CAAX geranylgeranyltransferase and CAAX farnesyltransferase are heterodimers that share the same alpha subunit but have different beta subunits. This gene encodes the alpha subunit of these transferases. Alternative splicing results in multiple transcript variants. Related pseudogenes have been identified on chromosomes 11 and 13. [provided by RefSeq, May 2010] | 8 | 43056323 | 43085785 | Human | 145 | symbol , COSMIC , Human Proteome Map | gene, protein-coding, REVIEWED [RefSeq] |
| 8833897 | Fnta | farnesyltransferase, CAAX box, subunit alpha | ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); alpha-tubulin binding (ortholog); CAAX-protein geranylgeranyltransferase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); enzyme-linked receptor protein signaling pathway (ortholog); negative reg ulation of apoptotic process (ortholog); FOUND IN CAAX-protein geranylgeranyltransferase complex (ortholog); microtubule associated complex (ortholog); protein farnesyltransferase complex (ortholog) | NW_004955457 | 13260825 | 13294025 | Chinchilla | 65 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 11917182 | FNTA | farnesyltransferase, CAAX box, subunit alpha | ENCODES a protein that exhibits CAAX-protein geranylgeranyltransferase activity (ortholog); heterocyclic compound binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); enzyme-linked receptor protein signaling pathway (ortholog); negative regul ation of apoptotic process (ortholog); FOUND IN CAAX-protein geranylgeranyltransferase complex (ortholog) | 8 | 42303987 | 42333743 | Bonobo | 68 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12348492 | FNTA | farnesyltransferase, CAAX box, subunit alpha | ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); alpha-tubulin binding (ortholog); CAAX-protein geranylgeranyltransferase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); enzyme-linked receptor protein signaling pathway (ortholog); negative reg ulation of apoptotic process (ortholog); FOUND IN CAAX-protein geranylgeranyltransferase complex (ortholog); microtubule associated complex (ortholog); protein farnesyltransferase complex (ortholog) | 16 | 22739070 | 22767942 | Dog | 74 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12471474 | Fnta | farnesyltransferase, CAAX box, subunit alpha | ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); alpha-tubulin binding (ortholog); CAAX-protein geranylgeranyltransferase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); enzyme-linked receptor protein signaling pathway (ortholog); negative reg ulation of apoptotic process (ortholog); FOUND IN CAAX-protein geranylgeranyltransferase complex (ortholog); microtubule associated complex (ortholog) | NW_004936570 | 362655 | 389649 | Squirrel | 69 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 14278768 | FNTA | farnesyltransferase, CAAX box, subunit alpha | ENCODES a protein that exhibits heterocyclic compound binding (ortholog); molecular adaptor activity (ortholog); peptide binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of cell cycle (ortholog); positive regulation of cell population prolifera tion (ortholog); FOUND IN CAAX-protein geranylgeranyltransferase complex (ortholog) | | | | Pig | 82 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 14383773 | Fnta | | | | | | Fly | | symbol | gene, null |
| 18490473 | FNTA | farnesyltransferase, CAAX box, subunit alpha | ENCODES a protein that exhibits heterocyclic compound binding (ortholog); molecular adaptor activity (ortholog); peptide binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of cell cycle (ortholog); positive regulation of cell population prolifera tion (ortholog); FOUND IN CAAX-protein geranylgeranyltransferase complex (ortholog) | | | | Green Monkey | 67 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 155251651 | fnta | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 626101911 | Fnta | farnesyltransferase, CAAX box, subunit alpha | ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); alpha-tubulin binding (ortholog); CAAX-protein geranylgeranyltransferase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); enzyme-linked receptor protein signaling pathway (ortholog); negative reg ulation of apoptotic process (ortholog); FOUND IN CAAX-protein geranylgeranyltransferase complex (ortholog); microtubule associated complex (ortholog); protein farnesyltransferase complex (ortholog) | | | | Black Rat | 65 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 620119 | Fntb | farnesyltransferase, CAAX box, subunit beta | ENCODES a protein that exhibits peptide binding; protein farnesyltransferase activity; acetyltransferase activator activity (ortholog); INVOLVED IN positive regulation of cell cycle; positive regulation of cell population proliferation; CAAX-box protein maturation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN microtubule associated complex (ortholog); protein farnesyltransferase complex (ortholog); INTERACTS WITH (S)-(-)-perillyl alcohol; 1,2,4-trimethylbenzene; 17beta-estradiol | 6 | 101269657 | 101352716 | Rat | 134 | symbol , PhenoGen | gene, protein-coding, PROVISIONAL [RefSeq] |
| 732388 | Fntb | farnesyltransferase, CAAX box, beta | Enables geranylgeranyl diphosphate synthase activity. Acts upstream of or within negative regulation of cell population proliferation; positive regulation of fibroblast proliferation; and wound healing. Predicted to be part of microtubule associated complex and protein farnesyltransferase complex. H uman ortholog(s) of this gene implicated in anxiety disorder. Orthologous to several human genes including FNTB (farnesyltransferase, CAAX box, subunit beta). [provided by Alliance of Genome Resources, Jul 2025] | 12 | 76884014 | 76968188 | Mouse | 160 | symbol , PhenoGen , description | gene, protein-coding, VALIDATED [RefSeq] |
| 736901 | FNTB | farnesyltransferase, CAAX box, subunit beta | Enables acetyltransferase activator activity; enzyme binding activity; and zinc ion binding activity. Contributes to protein farnesyltransferase activity. Involved in protein farnesylation and regulation of microtubule-based movement. Part of microtubule associated complex and protein farnesyltransf erase complex. Implicated in anxiety disorder. [provided by Alliance of Genome Resources, Jul 2025] | 14 | 64986895 | 65062650 | Human | 115 | symbol , COSMIC , Human Proteome Map | gene, protein-coding, VALIDATED [RefSeq] |
| 8896025 | Fntb | farnesyltransferase, CAAX box, subunit beta | ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); enzyme binding (ortholog); geranylgeranyl diphosphate synthase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); negative regulation of cell population proliferation (ortholog); positive regulatio n of cell cycle (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN microtubule associated complex (ortholog); protein farnesyltransferase complex (ortholog) | NW_004955466 | 4858628 | 4940247 | Chinchilla | 37 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 11821861 | FNTB | farnesyltransferase, CAAX box, subunit beta | ENCODES a protein that exhibits geranylgeranyl diphosphate synthase activity (ortholog); peptide binding (ortholog); protein farnesyltransferase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); negative regulation of cell population proliferation (ortholog); positive regulati on of cell cycle (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN microtubule associated complex (inferred); protein farnesyltransferase complex (inferred) | 14 | 45568511 | 45643952 | Bonobo | 49 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12406892 | FNTB | farnesyltransferase, CAAX box, beta | ENCODES a protein that exhibits geranylgeranyl diphosphate synthase activity (ortholog); peptide binding (ortholog); protein farnesyltransferase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); negative regulation of cell population proliferation (ortholog); positive regulati on of cell cycle (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN microtubule associated complex (inferred); protein farnesyltransferase complex (inferred) | 8 | 39364067 | 39429129 | Dog | 48 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 13976039 | FNTB | farnesyltransferase, CAAX box, beta | ENCODES a protein that exhibits geranylgeranyl diphosphate synthase activity (ortholog); peptide binding (ortholog); protein farnesyltransferase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); negative regulation of cell population proliferation (ortholog); positive regulati on of cell cycle (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN microtubule associated complex (inferred); protein farnesyltransferase complex (inferred) | | | | Pig | 49 | symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 18578489 | FNTB | farnesyltransferase, CAAX box, subunit beta | ENCODES a protein that exhibits geranylgeranyl diphosphate synthase activity (ortholog); peptide binding (ortholog); protein farnesyltransferase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); negative regulation of cell population proliferation (ortholog); positive regulati on of cell cycle (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN microtubule associated complex (inferred); protein farnesyltransferase complex (inferred) | | | | Green Monkey | 49 | symbol , ensembl_gene_symbol | gene, protein-coding, MODEL [RefSeq] |
| 18929390 | Fntb | farnesyltransferase, CAAX box, subunit beta | ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); enzyme binding (ortholog); geranylgeranyl diphosphate synthase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); negative regulation of cell population proliferation (ortholog); positive regulatio n of cell cycle (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN microtubule associated complex (ortholog) | | | | Naked Mole-Rat | 49 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 155246182 | fntb | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 626091130 | Fntb | farnesyltransferase, CAAX box, subunit beta | ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); enzyme binding (ortholog); geranylgeranyl diphosphate synthase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); negative regulation of cell population proliferation (ortholog); positive regulatio n of cell cycle (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); FOUND IN microtubule associated complex (ortholog); protein farnesyltransferase complex (ortholog) | | | | Black Rat | 36 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 155250642 | fn1.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 155242412 | fn1.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 621350 | Fnbp1 | formin binding protein 1 | ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN nervous system development; FOUND IN plasma membrane (ortholog); INTERACTS WITH 1,3-dinitrobenzene; 3-chloropropane-1,2-diol; 4-amino-2,6-dinitrotoluene | 3 | 34706814 | 34826770 | Rat | 142 | symbol , PhenoGen | gene, protein-coding, VALIDATED [RefSeq] |
| 731302 | Fnbp1 | formin binding protein 1 | Predicted to enable identical protein binding activity. Predicted to be involved in nervous system development. Predicted to be located in intracellular membrane-bounded organelle and plasma membrane. Is expressed in bladder; central nervous system; dorsal root ganglion; and gut. Orthologous to huma n FNBP1 (formin binding protein 1). [provided by Alliance of Genome Resources, Apr 2025] | 2 | 30916218 | 31032046 | Mouse | 140 | symbol , PhenoGen , description | gene, protein-coding, VALIDATED [RefSeq] |
| 1350700 | FNBP1 | formin binding protein 1 | The protein encoded by this gene is a member of the formin-binding-protein family. The protein contains an N-terminal Fer/Cdc42-interacting protein 4 (CIP4) homology (FCH) domain followed by a coiled-coil domain, a proline-rich motif, a second coiled-coil domain, a Rho family protein-binding domain (RBD), and a C-terminal SH3 domain. This protein binds sorting nexin 2 (SNX2), tankyrase (TNKS), and dynamin; an interaction between this protein and formin has not been demonstrated yet in human. [provided by RefSeq, Jul 2008] | 9 | 129887187 | 130053879 | Human | 142 | symbol , COSMIC , Human Proteome Map | gene, protein-coding, REVIEWED [RefSeq] |
| 8795844 | Fnbp1 | formin binding protein 1 | ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN nervous system development (ortholog); FOUND IN plasma membrane (ortholog) | NW_004955513 | 86004 | 137631 | Chinchilla | 15 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 11915819 | FNBP1 | formin binding protein 1 | ENCODES a protein that exhibits identical protein binding (inferred); lipid binding (inferred); INVOLVED IN nervous system development (ortholog); FOUND IN cell cortex (inferred); cytoskeleton (inferred); plasma membrane (inferred) | 9 | 101014402 | 101171302 | Bonobo | 22 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12350682 | FNBP1 | formin binding protein 1 | ENCODES a protein that exhibits identical protein binding (inferred); lipid binding (inferred); INVOLVED IN nervous system development (ortholog); FOUND IN cell cortex (inferred); cytoskeleton (inferred); plasma membrane (inferred) | 9 | 53809865 | 53962685 | Dog | 22 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12582178 | Fnbp1 | formin binding protein 1 | ENCODES a protein that exhibits identical protein binding (inferred); lipid binding (inferred); INVOLVED IN nervous system development (ortholog); FOUND IN cell cortex (inferred); cytoskeleton (inferred); plasma membrane (inferred) | NW_004936487 | 17078653 | 17142293 | Squirrel | 22 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 14229421 | FNBP1 | formin binding protein 1 | ENCODES a protein that exhibits identical protein binding (inferred); lipid binding (inferred); INVOLVED IN nervous system development (ortholog); FOUND IN cell cortex (inferred); cytoskeleton (inferred); plasma membrane (inferred) | | | | Pig | 22 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18790247 | FNBP1 | formin binding protein 1 | ENCODES a protein that exhibits identical protein binding (inferred); lipid binding (inferred); INVOLVED IN nervous system development (ortholog); FOUND IN cell cortex (inferred); cytoskeleton (inferred); plasma membrane (inferred) | | | | Green Monkey | 22 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18930664 | Fnbp1 | formin binding protein 1 | ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN nervous system development (ortholog); FOUND IN cell cortex (inferred); cytoskeleton (inferred); plasma membrane (inferred) | | | | Naked Mole-Rat | 21 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 155248560 | fnbp1 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 625934139 | Fnbp1 | formin binding protein 1 | ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN nervous system development (ortholog); FOUND IN plasma membrane (ortholog) | | | | Black Rat | 15 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 1309238 | Fnbp4 | formin binding protein 4 | FOUND IN nucleoplasm (ortholog); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene | 3 | 97188852 | 97218916 | Rat | 104 | symbol , PhenoGen | gene, protein-coding, VALIDATED [RefSeq] |
| 1319467 | FNBP4 | formin binding protein 4 | This gene encodes a protein containing two tryptophan-rich WW domains that binds the proline-rich formin homology 1 domains of formin family proteins, suggesting a role in the regulation of cytoskeletal dynamics during cell division and migration. It also binds intersectin family proteins suggesting a role in the maintenance of membrane curvature at sites of nascent vesicle formation. Naturally occurring mutations in this gene are associated with Waardenburg anophthalmia syndrome. [provided by RefSeq, Apr 2017] | 11 | 47716494 | 47767341 | Human | 103 | symbol , COSMIC , Human Proteome Map | gene, protein-coding, REVIEWED [RefSeq] |
| 1319468 | Fnbp4 | formin binding protein 4 | Predicted to be located in nucleoplasm. Is expressed in endolymphatic appendage and otocyst. Orthologous to human FNBP4 (formin binding protein 4). [provided by Alliance of Genome Resources, Jul 2025] | 2 | 90575793 | 90611365 | Mouse | 103 | symbol , PhenoGen , description , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 8728744 | Fnbp4 | formin binding protein 4 | FOUND IN nucleoplasm (ortholog) | NW_004955422 | 613817 | 641691 | Chinchilla | 4 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 11965614 | FNBP4 | formin binding protein 4 | FOUND IN nucleoplasm (inferred) | 11 | 47670537 | 47722068 | Bonobo | 4 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12132572 | FNBP4 | formin binding protein 4 | FOUND IN nucleoplasm (inferred) | 18 | 41913548 | 41958732 | Dog | 4 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12618675 | Fnbp4 | formin binding protein 4 | FOUND IN nucleoplasm (inferred) | NW_004936562 | 1513236 | 1554984 | Squirrel | 4 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 13951052 | FNBP4 | formin binding protein 4 | FOUND IN nucleoplasm (inferred); INTERACTS WITH deoxynivalenol | | | | Pig | 5 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18485401 | FNBP4 | formin binding protein 4 | FOUND IN nucleoplasm (inferred) | | | | Green Monkey | 4 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18915490 | Fnbp4 | formin binding protein 4 | FOUND IN nucleoplasm (ortholog) | | | | Naked Mole-Rat | 4 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 285276070 | fnbp4 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 625913197 | Fnbp4 | formin binding protein 4 | FOUND IN nucleoplasm (ortholog) | | | | Black Rat | 4 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 1310640 | Fndc1 | fibronectin type III domain containing 1 | INVOLVED IN cellular response to hypoxia; positive regulation of cardiac muscle cell apoptotic process; positive regulation of protein phosphorylation; FOUND IN cell-cell junction; cytoplasm; mitochondrial membrane; INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; 2,3,7,8-tetrachlorodib enzodioxine | 1 | 49686856 | 49769263 | Rat | 100 | symbol , PhenoGen | gene, protein-coding, VALIDATED [RefSeq] |
| 1321663 | FNDC1 | fibronectin type III domain containing 1 | Predicted to act upstream of or within several processes, including cellular response to hypoxia; positive regulation of cardiac muscle cell apoptotic process; and positive regulation of protein phosphorylation. Predicted to be located in cell-cell junction; mitochondrial membrane; and plasma membra ne. [provided by Alliance of Genome Resources, Jul 2025] | 6 | 159169400 | 159272108 | Human | 100 | symbol , COSMIC , Human Proteome Map , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1321664 | Fndc1 | fibronectin type III domain containing 1 | Predicted to act upstream of or within several processes, including cellular response to hypoxia; positive regulation of cardiac muscle cell apoptotic process; and positive regulation of protein phosphorylation. Predicted to be located in cell-cell junction; mitochondrial membrane; and plasma membra ne. Is expressed in alimentary system; dermis; embryo mesenchyme; eye; and salivary gland primordium. Orthologous to human FNDC1 (fibronectin type III domain containing 1). [provided by Alliance of Genome Resources, Jul 2025] | 17 | 7957401 | 8046158 | Mouse | 101 | symbol , PhenoGen , description | gene, protein-coding, VALIDATED [RefSeq] |
| 8863930 | Fndc1 | fibronectin type III domain containing 1 | INVOLVED IN cellular response to hypoxia (ortholog); positive regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of protein phosphorylation (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); mitochondrial membrane (ortholog) | NW_004955439 | 3251851 | 3356679 | Chinchilla | 8 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 11697384 | FNDC1 | fibronectin type III domain containing 1 | INVOLVED IN cellular response to hypoxia (ortholog); positive regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of protein phosphorylation (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); mitochondrial membrane (ortholog) | 6 | 157057862 | 157160066 | Bonobo | 9 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12311852 | FNDC1 | fibronectin type III domain containing 1 | INVOLVED IN cellular response to hypoxia (ortholog); positive regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of protein phosphorylation (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); mitochondrial membrane (ortholog) | 1 | 48501657 | 48602962 | Dog | 9 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12678496 | Fndc1 | fibronectin type III domain containing 1 | INVOLVED IN cellular response to hypoxia (ortholog); positive regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of protein phosphorylation (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); mitochondrial membrane (ortholog) | NW_004936489 | 10760209 | 10820377 | Squirrel | 9 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 14283889 | FNDC1 | fibronectin type III domain containing 1 | INVOLVED IN cellular response to hypoxia (ortholog); positive regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of protein phosphorylation (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); mitochondrial membrane (ortholog) | | | | Pig | 9 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18550806 | FNDC1 | fibronectin type III domain containing 1 | INVOLVED IN cellular response to hypoxia (ortholog); positive regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of protein phosphorylation (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); mitochondrial membrane (ortholog) | | | | Green Monkey | 9 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18915015 | Fndc1 | fibronectin type III domain containing 1 | INVOLVED IN cellular response to hypoxia (ortholog); positive regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of protein phosphorylation (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); mitochondrial membrane (ortholog) | | | | Naked Mole-Rat | 9 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 284148104 | fndc1 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 625854197 | Fndc1 | fibronectin type III domain containing 1 | INVOLVED IN cellular response to hypoxia (ortholog); positive regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of protein phosphorylation (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); mitochondrial membrane (ortholog) | | | | Black Rat | 8 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 1345842 | FNDC4 | fibronectin type III domain containing 4 | Involved in response to transforming growth factor beta. Predicted to be located in endoplasmic reticulum; extracellular space; and plasma membrane. [provided by Alliance of Genome Resources, Jul 2025] | 2 | 27491883 | 27495200 | Human | 92 | symbol , COSMIC , Human Proteome Map | gene, protein-coding, VALIDATED [RefSeq] |
| 1619201 | Fndc4 | fibronectin type III domain containing 4 | Involved in negative regulation of inflammatory response. Located in endoplasmic reticulum; extracellular space; and plasma membrane. Is expressed in several structures, including brain; genitourinary system; liver; lung; and spleen. Orthologous to human FNDC4 ( fibronectin type III domain containing 4). [provided by Alliance of Genome Resources, Jul 2025] | 5 | 31449589 | 31453279 | Mouse | 99 | symbol , PhenoGen , description , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 6496095 | Fndc4 | fibronectin type III domain containing 4 | INVOLVED IN negative regulation of inflammatory response (ortholog); response to transforming growth factor beta (ortholog); ASSOCIATED WITH lipid storage disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); plasma membrane (ortholog); INTERACTS WITH 17beta- estradiol; bisphenol A; (1->4)-beta-D-glucan (ortholog) | 6 | 30797102 | 30800782 | Rat | 91 | symbol , PhenoGen | gene, protein-coding, VALIDATED [RefSeq] |
| 8972946 | Fndc4 | fibronectin type III domain containing 4 | INVOLVED IN negative regulation of inflammatory response (ortholog); response to transforming growth factor beta (ortholog); ASSOCIATED WITH lipid storage disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); plasma membrane (ortholog) | NW_004955469 | 9456964 | 9459721 | Chinchilla | 6 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 11704197 | FNDC4 | fibronectin type III domain containing 4 | INVOLVED IN negative regulation of inflammatory response (inferred); response to transforming growth factor beta (inferred); ASSOCIATED WITH lipid storage disease (ortholog); FOUND IN endoplasmic reticulum (inferred); extracellular region (inferred); extracellular space (inferred) | 2A | 27494396 | 27497747 | Bonobo | 11 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12142650 | FNDC4 | fibronectin type III domain containing 4 | INVOLVED IN negative regulation of inflammatory response (inferred); response to transforming growth factor beta (inferred); ASSOCIATED WITH lipid storage disease (ortholog); FOUND IN endoplasmic reticulum (inferred); extracellular region (inferred); extracellular space (inferred) | 17 | 21428771 | 21431813 | Dog | 11 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12680748 | Fndc4 | fibronectin type III domain containing 4 | INVOLVED IN negative regulation of inflammatory response (inferred); response to transforming growth factor beta (inferred); ASSOCIATED WITH lipid storage disease (ortholog); FOUND IN endoplasmic reticulum (inferred); extracellular region (inferred); extracellular space (inferred) | NW_004936493 | 5103613 | 5106755 | Squirrel | 11 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 14209242 | FNDC4 | fibronectin type III domain containing 4 | INVOLVED IN negative regulation of inflammatory response (inferred); response to transforming growth factor beta (inferred); ASSOCIATED WITH lipid storage disease (ortholog); FOUND IN endoplasmic reticulum (inferred); extracellular region (inferred); extracellular space (inferred); INTERACTS WITH de oxynivalenol; zearalenone | | | | Pig | 13 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18564928 | FNDC4 | fibronectin type III domain containing 4 | INVOLVED IN negative regulation of inflammatory response (inferred); response to transforming growth factor beta (inferred); ASSOCIATED WITH lipid storage disease (ortholog); FOUND IN endoplasmic reticulum (inferred); extracellular region (inferred); extracellular space (inferred) | | | | Green Monkey | 11 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18919323 | Fndc4 | fibronectin type III domain containing 4 | INVOLVED IN response to transforming growth factor beta (ortholog); ASSOCIATED WITH lipid storage disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog) | | | | Naked Mole-Rat | 9 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 20866633 | FNDC4 | fibronectin type III domain containing 4 | | | | | Green Monkey | | symbol | gene, protein-coding |
| 155245165 | fndc4 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 626067534 | Fndc4 | fibronectin type III domain containing 4 | INVOLVED IN negative regulation of inflammatory response (ortholog); response to transforming growth factor beta (ortholog); ASSOCIATED WITH lipid storage disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); plasma membrane (ortholog) | | | | Black Rat | 6 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 708525 | Fndc5 | fibronectin type III domain containing 5 | ENCODES a protein that exhibits hormone activity (inferred); INVOLVED IN positive regulation of brown fat cell differentiation (ortholog); response to muscle activity (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); endomyocardial fibrosis (ortholog); hypertension (ortholog); FOUND IN endoplasmi c reticulum (ortholog); extracellular region (ortholog); plasma membrane (ortholog); INTERACTS WITH (R)-noradrenaline; 17beta-estradiol; 17beta-estradiol 3-benzoate | 5 | 146765951 | 146775611 | Rat | 147 | symbol , PhenoGen | gene, protein-coding, VALIDATED [RefSeq] |
| 1348160 | FNDC5 | fibronectin type III domain containing 5 | This gene encodes a secreted protein that is released from muscle cells during exercise. The encoded protein may participate in the development of brown fat. Translation of the precursor protein initiates at a non-AUG start codon at a position that is conserved as an AUG start codon in other organis ms. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jun 2013] | 1 | 32862268 | 32872484 | Human | 144 | symbol , COSMIC , Human Proteome Map | gene, protein-coding, REVIEWED [RefSeq] |
| 1557788 | Fndc5 | fibronectin type III domain containing 5 | This gene encodes a type I transmembrane protein containing fibronectin type III repeat. The encoded transmembrane protein undergoes proteolytic processing to generate a soluble hormone named irisin that is secreted into the bloodstream. The expression of this gene followed by the secretion of irisi n from skeletal muscle is induced by exercise. The ectopic expression of the encoded protein in mice causes an elevation of irisin in blood and improves metabolic health. [provided by RefSeq, Jul 2016] | 4 | 129030672 | 129038386 | Mouse | 159 | symbol , PhenoGen | gene, protein-coding, VALIDATED [RefSeq] |
| 8975191 | Fndc5 | fibronectin type III domain containing 5 | INVOLVED IN positive regulation of brown fat cell differentiation (ortholog); response to muscle activity (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); endomyocardial fibrosis (ortholog); hypertension (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); plas ma membrane (ortholog) | NW_004955452 | 11120823 | 11127010 | Chinchilla | 11 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 11759410 | FNDC5 | fibronectin type III domain containing 5 | INVOLVED IN response to muscle activity (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); endomyocardial fibrosis (ortholog); hypertension (ortholog); FOUND IN endoplasmic reticulum (ortholog) | 1 | 32152828 | 32161447 | Bonobo | 13 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12083307 | FNDC5 | fibronectin type III domain containing 5 | INVOLVED IN response to muscle activity (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); endomyocardial fibrosis (ortholog); hypertension (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) | 2 | 68485941 | 68493491 | Dog | 14 | symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 12541518 | Fndc5 | fibronectin type III domain containing 5 | INVOLVED IN response to muscle activity (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); endomyocardial fibrosis (ortholog); hypertension (ortholog); FOUND IN endoplasmic reticulum (ortholog) | NW_004936474 | 15765169 | 15776452 | Squirrel | 13 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 14005751 | FNDC5 | fibronectin type III domain containing 5 | ENCODES a protein that exhibits aminoacyl-tRNA ligase activity (inferred); ATP binding (inferred); ligase activity (inferred); INVOLVED IN response to muscle activity (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); endomyocardial fibrosis (ortholog); hypertension (ortholog); FOUND IN endoplasmi c reticulum (ortholog); plasma membrane (ortholog) | | | | Pig | 33 | symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 18351258 | FNDC5 | fibronectin type III domain containing 5 | INVOLVED IN positive regulation of brown fat cell differentiation (ortholog); response to muscle activity (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); endomyocardial fibrosis (ortholog); hypertension (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); plas ma membrane (ortholog) | | | | Green Monkey | 11 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18903119 | Fndc5 | fibronectin type III domain containing 5 | INVOLVED IN response to muscle activity (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); endomyocardial fibrosis (ortholog); hypertension (ortholog); FOUND IN endoplasmic reticulum (ortholog) | | | | Naked Mole-Rat | 13 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 20865679 | FNDC5 | fibronectin type III domain containing 5 | INVOLVED IN positive regulation of brown fat cell differentiation (inferred); FOUND IN extracellular region (inferred); membrane (inferred); plasma membrane (inferred) | | | | Green Monkey | 5 | symbol | gene, protein-coding |
| 625928581 | Fndc5 | fibronectin type III domain containing 5 | INVOLVED IN positive regulation of brown fat cell differentiation (ortholog); response to muscle activity (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); endomyocardial fibrosis (ortholog); hypertension (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); plas ma membrane (ortholog) | | | | Black Rat | 11 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 1309189 | Fndc7 | fibronectin type III domain containing 7 | INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; alpha-Zearalanol; bisphenol A | 2 | 199189029 | 199226425 | Rat | 30 | symbol , PhenoGen | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1551490 | Fndc7 | fibronectin type III domain containing 7 | Predicted to be located in extracellular region. Is expressed in adrenal gland; genitourinary system; gut; thymus; and trachea. Orthologous to human FNDC7 (fibronectin type III domain containing 7). [provided by Alliance of Genome Resources, Jul 2025] | 3 | 108760898 | 108797324 | Mouse | 37 | symbol , PhenoGen , description | gene, protein-coding, VALIDATED [RefSeq] |
| 1604516 | FNDC7 | fibronectin type III domain containing 7 | Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Jul 2025] | 1 | 108712908 | 108742749 | Human | 31 | symbol , COSMIC , Human Proteome Map | gene, protein-coding, VALIDATED [RefSeq] |
| 8710719 | Fndc7 | fibronectin type III domain containing 7 | | NW_004955435 | 12185187 | 12213242 | Chinchilla | | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12027790 | FNDC7 | fibronectin type III domain containing 7 | | 1 | 111085903 | 111107599 | Bonobo | | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12219683 | FNDC7 | fibronectin type III domain containing 7 | | 6 | 43002942 | 43032370 | Dog | | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12554258 | Fndc7 | fibronectin type III domain containing 7 | | NW_004936704 | 300128 | 325028 | Squirrel | | symbol | gene, protein-coding, MODEL [RefSeq] |
| 14090768 | FNDC7 | fibronectin type III domain containing 7 | INTERACTS WITH deoxynivalenol | | | | Pig | 1 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18549338 | FNDC7 | fibronectin type III domain containing 7 | | | | | Green Monkey | | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18911110 | Fndc7 | fibronectin type III domain containing 7 | | | | | Naked Mole-Rat | | symbol | gene, protein-coding, MODEL [RefSeq] |
| 152178152 | FNDC7 | fibronectin type III domain containing 7 | | | | | Naked Mole-Rat | | symbol | gene, protein-coding |
| 155255471 | fndc7 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 625881937 | Fndc7 | fibronectin type III domain containing 7 | | | | | Black Rat | | symbol | gene, protein-coding, MODEL [RefSeq] |
| 1310708 | Fndc8 | fibronectin type III domain containing 8 | ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); INTERACTS WITH bisphenol A; C60 fullerene; furan | 10 | 68323500 | 68331638 | Rat | 20 | symbol , PhenoGen | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1332331 | Fndc8 | fibronectin type III domain containing 8 | Orthologous to human FNDC8 (fibronectin type III domain containing 8). [provided by Alliance of Genome Resources, Jul 2025] | 11 | 82782971 | 82791563 | Mouse | 22 | symbol , PhenoGen , description | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1603304 | FNDC8 | fibronectin type III domain containing 8 | Located in nucleus. [provided by Alliance of Genome Resources, Jul 2025] | 17 | 35121615 | 35130732 | Human | 21 | symbol , COSMIC , Human Proteome Map | gene, protein-coding, VALIDATED [RefSeq] |
| 8789846 | Fndc8 | fibronectin type III domain containing 8 | ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) | NW_004955481 | 9812402 | 9820070 | Chinchilla | 3 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 11943909 | FNDC8 | fibronectin type III domain containing 8 | ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleus (inferred) | 17 | 21655487 | 21665633 | Bonobo | 4 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12169932 | FNDC8 | fibronectin type III domain containing 8 | ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) | 9 | 38232116 | 38240791 | Dog | 3 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12600187 | Fndc8 | fibronectin type III domain containing 8 | ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleus (inferred) | NW_004936538 | 110569 | 117961 | Squirrel | 4 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 13914216 | FNDC8 | fibronectin type III domain containing 8 | ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) | | | | Pig | 3 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18563327 | FNDC8 | fibronectin type III domain containing 8 | ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleus (inferred) | | | | Green Monkey | 4 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18901865 | Fndc8 | fibronectin type III domain containing 8 | ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleus (inferred) | | | | Naked Mole-Rat | 4 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 626093981 | Fndc8 | fibronectin type III domain containing 8 | ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) | | | | Black Rat | 3 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 1606861 | FNDC9 | fibronectin type III domain containing 9 | Predicted to be located in membrane. [provided by Alliance of Genome Resources, Jul 2025] | 5 | 157341598 | 157345677 | Human | 19 | symbol , COSMIC , Human Proteome Map | gene, protein-coding, VALIDATED [RefSeq] |
| 1621243 | Fndc9 | fibronectin type III domain containing 9 | Predicted to be located in membrane. Orthologous to human FNDC9 (fibronectin type III domain containing 9). [provided by Alliance of Genome Resources, Jul 2025] | 11 | 46126384 | 46130698 | Mouse | 35 | symbol , PhenoGen , description | gene, protein-coding, VALIDATED [RefSeq] |
| 2318580 | Fndc9 | fibronectin type III domain containing 9 | INTERACTS WITH 17beta-estradiol; 17beta-estradiol 3-benzoate; testosterone | 10 | 31166051 | 31170964 | Rat | 18 | symbol , PhenoGen | gene, protein-coding, VALIDATED [RefSeq] |
| 8983031 | Fndc9 | fibronectin type III domain containing 9 | | NW_004955408 | 11540165 | 11544681 | Chinchilla | 1 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 11925193 | FNDC9 | fibronectin type III domain containing 9 | | 5 | 152742642 | 152746865 | Bonobo | 1 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12237349 | FNDC9 | fibronectin type III domain containing 9 | | 4 | 52818233 | 52823205 | Dog | 1 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12658024 | Fndc9 | fibronectin type III domain containing 9 | | NW_004936515 | 5800408 | 5805310 | Squirrel | 1 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 13865973 | FNDC9 | fibronectin type III domain containing 9 | | | | | Pig | 1 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18659206 | FNDC9 | fibronectin type III domain containing 9 | | | | | Green Monkey | 1 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18900904 | Fndc9 | fibronectin type III domain containing 9 | | | | | Naked Mole-Rat | 1 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 625904471 | Fndc9 | fibronectin type III domain containing 9 | | | | | Black Rat | 1 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 626469722 | fndc9 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 1312177 | Fnip1 | folliculin interacting protein 1 | Predicted to enable several functions, including ATPase inhibitor activity; enzyme activator activity; and protein-folding chaperone binding activity. Acts upstream of or within with a positive effect on negative regulation of cell population proliferation. Acts upstream of or within several process es, including immature B cell differentiation; negative regulation of TOR signaling; and positive regulation of B cell apoptotic process. Located in cytoplasm. Human ortholog(s) of this gene implicated in immunodeficiency 93. Orthologous to human FNIP1 (folliculin interacting protein 1). [provided by Alliance of Genome Resources, Jul 2025] | 11 | 54328071 | 54409067 | Mouse | 252 | symbol , PhenoGen , description | gene, protein-coding, VALIDATED [RefSeq] |
| 1606476 | FNIP1 | folliculin interacting protein 1 | This gene encodes a protein that binds to the tumor suppressor protein folliculin and to AMP-activated protein kinase (AMPK). The encoded protein participates in the regulation of cellular metabolism and nutrient sensing by modulating the AMPK and target of rapamycin signaling pathways. This gene ha s a closely related paralog that encodes a protein with similar binding activities. Both related proteins also associate with the molecular chaperone heat shock protein-90 (Hsp90) and negatively regulate its ATPase activity and facilitate its association with folliculin. [provided by RefSeq, Jul 2017] | 5 | 131641714 | 131797017 | Human | 157 | symbol , COSMIC , Human Proteome Map | gene, protein-coding, REVIEWED [RefSeq] |
| 2318339 | Fnip1 | folliculin interacting protein 1 | ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cellular response to starvation (ortholog); immature B cell differentiation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH genetic disease (ortholog); immunodeficiency 93 (ortholog); Wolff-Parkinson-White syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); FNIP-folliculin RagC/D GAP (ortholog); INTERACTS WITH 17beta-estradiol; acetamide; amitrole | 10 | 39068432 | 39151552 | Rat | 140 | symbol , PhenoGen , description | gene, protein-coding, VALIDATED [RefSeq] |
| 8965590 | Fnip1 | folliculin interacting protein 1 | ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cellular response to starvation (ortholog); immature B cell differentiation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH genetic disease (ortholog); immunodeficiency 93 (ortholog); Wolff-Parkinson-White syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); FNIP-folliculin RagC/D GAP (ortholog) | NW_004955408 | 3117258 | 3238223 | Chinchilla | 36 | symbol , description | gene, protein-coding, MODEL [RefSeq] |
| 11870364 | FNIP1 | folliculin interacting protein 1 | ENCODES a protein that exhibits ATPase inhibitor activity (inferred); enzyme activator activity (inferred); enzyme binding (inferred); INVOLVED IN cellular response to starvation (ortholog); immature B cell differentiation (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH genetic disease (ortholog); immunodeficiency 93 (ortholog); Wolff-Parkinson-White syndrome (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); FNIP-folliculin RagC/D GAP (inferred) | 5 | 127070906 | 127219548 | Bonobo | 41 | symbol , description | gene, protein-coding, MODEL [RefSeq] |
| 12150326 | FNIP1 | folliculin interacting protein 1 | ENCODES a protein that exhibits ATPase inhibitor activity (inferred); enzyme activator activity (inferred); enzyme binding (inferred); INVOLVED IN cellular response to starvation (ortholog); immature B cell differentiation (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH genetic disease (ortholog); immunodeficiency 93 (ortholog); Wolff-Parkinson-White syndrome (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); FNIP-folliculin RagC/D GAP (inferred) | 11 | 19979294 | 20134341 | Dog | 41 | symbol , description | gene, protein-coding, MODEL [RefSeq] |
| 12719853 | Fnip1 | folliculin interacting protein 1 | ENCODES a protein that exhibits ATPase inhibitor activity (inferred); enzyme activator activity (inferred); enzyme binding (inferred); INVOLVED IN cellular response to starvation (ortholog); immature B cell differentiation (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH genetic disease (ortholog); immunodeficiency 93 (ortholog); Wolff-Parkinson-White syndrome (ortholog); FOUND IN cytoplasm (ortholog) | NW_004936647 | 3329097 | 3428170 | Squirrel | 48 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 14067865 | FNIP1 | folliculin interacting protein 1 | ENCODES a protein that exhibits ATPase inhibitor activity (inferred); enzyme activator activity (inferred); enzyme binding (inferred); INVOLVED IN cellular response to starvation (ortholog); immature B cell differentiation (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH genetic disease (ortholog); immunodeficiency 93 (ortholog); Wolff-Parkinson-White syndrome (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); FNIP-folliculin RagC/D GAP (inferred); INTERACTS WITH ammonia | | | | Pig | 42 | symbol , description | gene, protein-coding, MODEL [RefSeq] |
| 18495862 | FNIP1 | folliculin interacting protein 1 | ENCODES a protein that exhibits ATPase inhibitor activity (inferred); enzyme activator activity (inferred); enzyme binding (inferred); INVOLVED IN cellular response to starvation (ortholog); immature B cell differentiation (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH genetic disease (ortholog); immunodeficiency 93 (ortholog); Wolff-Parkinson-White syndrome (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); FNIP-folliculin RagC/D GAP (inferred) | | | | Green Monkey | 41 | symbol , description | gene, protein-coding, MODEL [RefSeq] |
| 18931017 | Fnip1 | folliculin interacting protein 1 | ENCODES a protein that exhibits enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cellular response to starvation (ortholog); immature B cell differentiation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH genetic dise ase (ortholog); immunodeficiency 93 (ortholog); Wolff-Parkinson-White syndrome (ortholog); FOUND IN cytosol (ortholog); FNIP-folliculin RagC/D GAP (ortholog) | | | | Naked Mole-Rat | 38 | symbol , description | gene, protein-coding, MODEL [RefSeq] |
| 155245176 | fnip1 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 626122476 | Fnip1 | folliculin interacting protein 1 | ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cellular response to starvation (ortholog); immature B cell differentiation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH genetic disease (ortholog); immunodeficiency 93 (ortholog); Wolff-Parkinson-White syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); FNIP-folliculin RagC/D GAP (ortholog) | | | | Black Rat | 36 | symbol , description | gene, protein-coding, MODEL [RefSeq] |
| 1562174 | Fnip2 | folliculin interacting protein 2 | ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of transcri ption by RNA polymerase II (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Leukoencephalopathies (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytosol (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; 2,3,4,7,8-Pentachlorodibenzofuran | 2 | 166894726 | 167006490 | Rat | 118 | symbol , PhenoGen | gene, protein-coding, VALIDATED [RefSeq] |
| 1609892 | Fnip2 | folliculin interacting protein 2 | Predicted to enable ATPase inhibitor activity and protein-folding chaperone binding activity. Involved in intrinsic apoptotic signaling pathway in response to DNA damage. Acts upstream of or within with a positive effect on negative regulation of cell population proliferation. Located in cytoplasm. Orthologous to human FNIP2 (folliculin interacting protein 2). [provided by Alliance of Genome Resources, Jul 2025] | 3 | 79363556 | 79475458 | Mouse | 132 | symbol , old_gene_name , PhenoGen , description | gene, protein-coding, VALIDATED [RefSeq] |
| 2292121 | FNIP2 | folliculin interacting protein 2 | This gene encodes a protein that binds to the tumor suppressor folliculin and to AMP-activated protein kinase (AMPK), and may play a role cellular metabolism and nutrient sensing by regulating the AMPK-mechanistic target of rapamycin signaling pathway. The encoded protein may also be involved in reg ulating the O6-methylguanine-induced apoptosis signaling pathway. This gene has a closely related paralog that encodes a protein with similar binding activities. Both related proteins also associate with the molecular chaperone heat shock protein-90 (Hsp90) and negatively regulate its ATPase activity and facilitate its association with folliculin. [provided by RefSeq, Jul 2017] | 4 | 158769026 | 158908050 | Human | 122 | symbol , old_gene_name , COSMIC , Human Proteome Map , old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 8894819 | Fnip2 | folliculin interacting protein 2 | ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of transcri ption by RNA polymerase II (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Leukoencephalopathies (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytosol (ortholog) | NW_004955471 | 12329686 | 12444782 | Chinchilla | 21 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 11883911 | FNIP2 | folliculin interacting protein 2 | ENCODES a protein that exhibits ATPase inhibitor activity (inferred); protein-folding chaperone binding (inferred); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Leukoencephalopathies (ortholog); FOUND IN centriolar satellite (inferred); cytoplasm (inferred); cytosol (inferred) | 4 | 151086854 | 151224192 | Bonobo | 25 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12121120 | FNIP2 | folliculin interacting protein 2 | ENCODES a protein that exhibits ATPase inhibitor activity (inferred); protein-folding chaperone binding (inferred); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Leukoencephalopathies; FOUND IN centriolar satellite (inferred); cytoplasm (inferred); cytosol (inferred) | 15 | 55871782 | 55962676 | Dog | 25 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12661327 | Fnip2 | folliculin interacting protein 2 | ENCODES a protein that exhibits ATPase inhibitor activity (inferred); protein-folding chaperone binding (inferred); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of transcri ption by RNA polymerase II (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Leukoencephalopathies (ortholog); FOUND IN cytoplasm (ortholog) | NW_004936576 | 5221619 | 5335133 | Squirrel | 28 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 14129694 | FNIP2 | folliculin interacting protein 2 | ENCODES a protein that exhibits ATPase inhibitor activity (inferred); protein-folding chaperone binding (inferred); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Leukoencephalopathies (ortholog); FOUND IN centriolar satellite (inferred); cytoplasm (inferred); cytosol (inferred); INTERACTS WITH deoxynivalenol | | | | Pig | 26 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18431325 | FNIP2 | folliculin interacting protein 2 | ENCODES a protein that exhibits ATPase inhibitor activity (inferred); protein-folding chaperone binding (inferred); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Leukoencephalopathies (ortholog); FOUND IN centriolar satellite (inferred); cytoplasm (inferred); cytosol (inferred) | | | | Green Monkey | 25 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18911491 | Fnip2 | folliculin interacting protein 2 | ENCODES a protein that exhibits ATPase inhibitor activity (inferred); protein-folding chaperone binding (inferred); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of transcri ption by RNA polymerase II (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Leukoencephalopathies (ortholog); FOUND IN centriolar satellite (ortholog); cytosol (ortholog); FNIP-folliculin RagC/D GAP (ortholog) | | | | Naked Mole-Rat | 23 | symbol , description | gene, protein-coding, MODEL [RefSeq] |
| 155235681 | fnip2 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 626022068 | Fnip2 | folliculin interacting protein 2 | ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of transcri ption by RNA polymerase II (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Leukoencephalopathies (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytosol (ortholog) | | | | Black Rat | 21 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 38605219 | FN1-DT | FN1 divergent transcript | | 2 | 215435691 | 215438945 | Human | | symbol , GTEx , COSMIC , name , Human Proteome Map | gene, ncrna, VALIDATED [RefSeq] |
| 155248890 | fn3k.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 1304570 | Fn3krp | fructosamine-3-kinase-related protein | ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); sequence-specific DNA binding (inferred); INVOLVED IN positive regulation of DNA-templated transcription (inferred); regulation of DNA-templated transcription (inferred); regulation of trans cription by RNA polymerase II (inferred); FOUND IN nucleus (inferred); INTERACTS WITH (+)-schisandrin B; 2,2',5,5'-tetrachlorobiphenyl; bisphenol A | 10 | 107186695 | 107195419 | Rat | 70 | symbol , PhenoGen | gene, protein-coding, VALIDATED [RefSeq] |
| 1312085 | Fn3krp | fructosamine 3 kinase related protein | Predicted to enable kinase activity and protein-ribulosamine 3-kinase activity. Predicted to be involved in peptidyl-lysine deglycation. Predicted to be active in cytosol. Is expressed in liver. Orthologous to human FN3KRP (fructosamine 3 kinase related protein) . [provided by Alliance of Genome Resources, Jul 2025] | 11 | 121312199 | 121322114 | Mouse | 73 | symbol , old_gene_name , PhenoGen , description , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1606224 | FN3KRP | fructosamine 3 kinase related protein | A high concentration of glucose can result in non-enzymatic oxidation of proteins by reaction of glucose and lysine residues (glycation). Proteins modified in this way are less active or functional. This gene encodes an enzyme which catalyzes the phosphorylation of psicosamines and ribulosamines com pared to the neighboring gene which encodes a highly similar enzyme, fructosamine-3-kinase, which has different substrate specificity. The activity of both enzymes may result in deglycation of proteins to restore their function. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2012] | 17 | 82716706 | 82728013 | Human | 74 | symbol , old_gene_name , COSMIC , Human Proteome Map , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 9010237 | Fn3krp | fructosamine 3 kinase related protein | | NW_004955506 | 451455 | 461073 | Chinchilla | | symbol | gene, protein-coding, MODEL [RefSeq] |
| 11758565 | FN3KRP | fructosamine 3 kinase related protein | ENCODES a protein that exhibits ATP binding (inferred); kinase activity (inferred); nucleotide binding (inferred); FOUND IN cytoplasm (inferred); cytosol (inferred) | 17 | 77134273 | 77145543 | Bonobo | 7 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12050305 | FN3KRP | fructosamine 3 kinase related protein | ENCODES a protein that exhibits ATP binding (inferred); kinase activity (inferred); nucleotide binding (inferred); FOUND IN cytosol (inferred) | | | | Dog | 7 | symbol | gene, protein-coding, INFERRED [RefSeq] |
| 12535172 | Fn3krp | fructosamine 3 kinase related protein | ENCODES a protein that exhibits kinase activity (inferred); transferase activity (inferred) | NW_004936923 | 213884 | 219089 | Squirrel | 3 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 14252713 | FN3KRP | fructosamine 3 kinase related protein | ENCODES a protein that exhibits ATP binding (inferred); kinase activity (inferred); nucleotide binding (inferred); FOUND IN cytosol (inferred) | | | | Pig | 7 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18355580 | FN3KRP | fructosamine 3 kinase related protein | ENCODES a protein that exhibits ATP binding (inferred); kinase activity (inferred); nucleotide binding (inferred); FOUND IN cytosol (inferred) | | | | Green Monkey | 6 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18922280 | Fn3krp | fructosamine 3 kinase related protein | ENCODES a protein that exhibits ATP binding (inferred); kinase activity (inferred); nucleotide binding (inferred); FOUND IN cytosol (inferred) | | | | Naked Mole-Rat | 6 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 155258752 | fn3krp | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 625939453 | Fn3krp | fructosamine 3 kinase related protein | ENCODES a protein that exhibits kinase activity (inferred) | | | | Black Rat | 1 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 1305386 | Fnbp1l | formin binding protein 1-like | ENCODES a protein that exhibits GTPase binding (ortholog); INVOLVED IN cilium assembly (ortholog); clathrin-dependent endocytosis (ortholog); membrane invagination (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ort holog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acrylamide | 2 | 213331871 | 213432821 | Rat | 150 | symbol , PhenoGen | gene, protein-coding, VALIDATED [RefSeq] |
| 1346897 | FNBP1L | formin binding protein 1 like | The protein encoded by this gene binds to both CDC42 and N-WASP. This protein promotes CDC42-induced actin polymerization by activating the N-WASP-WIP complex and, therefore, is involved in a pathway that links cell surface signals to the actin cytoskeleton. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008] | 1 | 93448118 | 93554661 | Human | 143 | symbol , COSMIC , Human Proteome Map | gene, protein-coding, REVIEWED [RefSeq] |
| 1550269 | Fnbp1l | formin binding protein 1-like | Predicted to enable GTPase binding activity. Predicted to be involved in several processes, including plasma membrane tubulation; positive regulation of filopodium assembly; and vesicle transport along actin filament. Predicted to act upstream of or within cilium assembly. Predicted to be located in cytoplasmic vesicle and cytosol. Is expressed in central nervous system; dorsal root ganglion; gut; male reproductive gland or organ; and neural retina. Orthologous to human FNBP1L (formin binding protein 1 like). [provided by Alliance of Genome Resources, Jul 2025] | 3 | 122332368 | 122413363 | Mouse | 144 | symbol , PhenoGen , description | gene, protein-coding, VALIDATED [RefSeq] |
| 8968235 | Fnbp1l | formin binding protein 1 like | ENCODES a protein that exhibits GTPase binding (ortholog); INVOLVED IN cilium assembly (ortholog); clathrin-dependent endocytosis (ortholog); membrane invagination (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ort holog) | NW_004955423 | 1115828 | 1220316 | Chinchilla | 19 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 11942986 | FNBP1L | formin binding protein 1 like | ENCODES a protein that exhibits GTPase binding (inferred); lipid binding (inferred); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cell cortex (inferred); cytoplasm (inferred); cytoplasmic vesicle (inferred) | 1 | 96117160 | 96223362 | Bonobo | 28 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12166974 | FNBP1L | formin binding protein 1 like | ENCODES a protein that exhibits GTPase binding (inferred); lipid binding (inferred); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cell cortex (inferred); cytoplasm (inferred); cytoplasmic vesicle (inferred) | 6 | 55533270 | 55642622 | Dog | 28 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12662938 | Fnbp1l | formin binding protein 1 like | ENCODES a protein that exhibits GTPase binding (inferred); lipid binding (inferred); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cell cortex (inferred); cytoplasm (inferred); cytoplasmic vesicle (inferred) | NW_004936537 | 5671517 | 5789480 | Squirrel | 28 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 13891345 | FNBP1L | formin binding protein 1 like | ENCODES a protein that exhibits GTPase binding (inferred); lipid binding (inferred); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cell cortex (inferred); cytoplasm (inferred); cytoplasmic vesicle (inferred) | | | | Pig | 28 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18646030 | FNBP1L | formin binding protein 1 like | ENCODES a protein that exhibits GTPase binding (inferred); lipid binding (inferred); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cell cortex (inferred); cytoplasm (inferred); cytoplasmic vesicle (inferred) | | | | Green Monkey | 28 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18912120 | Fnbp1l | formin binding protein 1 like | ENCODES a protein that exhibits GTPase binding (ortholog); INVOLVED IN cilium assembly (ortholog); clathrin-dependent endocytosis (ortholog); membrane invagination (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) | | | | Naked Mole-Rat | 27 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 155243715 | fnbp1l | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 625978375 | Fnbp1l | formin binding protein 1 like | ENCODES a protein that exhibits GTPase binding (ortholog); INVOLVED IN cilium assembly (ortholog); clathrin-dependent endocytosis (ortholog); membrane invagination (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ort holog) | | | | Black Rat | 19 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 14383555 | fnci-1 | | | | | | Roundworm | | symbol | gene, null |
| 1614039 | Fnd3c2 | fibronectin type III domain containing 3C2 | FOUND IN membrane (inferred); INTERACTS WITH 1,2-dimethylhydrazine; 4,4'-sulfonyldiphenol; bisphenol A | X | 105278852 | 105298978 | Mouse | 12 | symbol , PhenoGen | gene, protein-coding, VALIDATED [RefSeq] |
| 14373262 | fndc-1 | | | | | | Roundworm | | symbol | gene, null |
| 1589420 | Fndc10 | fibronectin type III domain containing 10 | FOUND IN membrane (inferred); INTERACTS WITH 17beta-estradiol; bisphenol A; ochratoxin A | 5 | 171581960 | 171584519 | Rat | 36 | symbol , PhenoGen | gene, protein-coding, VALIDATED [RefSeq] |
| 1617352 | Fndc10 | fibronectin type III domain containing 10 | Predicted to be located in membrane. Orthologous to human FNDC10 (fibronectin type III domain containing 10). [provided by Alliance of Genome Resources, Jul 2025] | 4 | 155778775 | 155780942 | Mouse | 39 | symbol , PhenoGen , description | gene, protein-coding, VALIDATED [RefSeq] |
| 6480141 | FNDC10 | fibronectin type III domain containing 10 | Predicted to be located in membrane. [provided by Alliance of Genome Resources, Jul 2025] | 1 | 1598012 | 1600135 | Human | 36 | symbol , COSMIC , Human Proteome Map | gene, protein-coding, VALIDATED [RefSeq] |
| 8898370 | Fndc10 | fibronectin type III domain containing 10 | | NW_004955486 | 9301802 | 9303246 | Chinchilla | | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12023302 | FNDC10 | fibronectin type III domain containing 10 | | 1 | 359080 | 361223 | Bonobo | | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12076375 | FNDC10 | fibronectin type III domain containing 10 | | 5 | 56660721 | 56662696 | Dog | | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12725337 | Fndc10 | fibronectin type III domain containing 10 | | NW_004936737 | 1658932 | 1668081 | Squirrel | | symbol | gene, protein-coding, MODEL [RefSeq] |
| 13893552 | FNDC10 | fibronectin type III domain containing 10 | | | | | Pig | | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18689341 | FNDC10 | fibronectin type III domain containing 10 | | | | | Green Monkey | | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18918567 | Fndc10 | fibronectin type III domain containing 10 | | | | | Naked Mole-Rat | | symbol | gene, protein-coding, MODEL [RefSeq] |
| 19259638 | FNDC10 | fibronectin type III domain containing 10 | | | | | Dog | | symbol | gene, pseudogene |
| 405858215 | fndc10 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 405858905 | fndc10 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 405861428 | fndc10 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 405864439 | fndc10 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 598152001 | fndc10 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 598153204 | fndc10 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 625995351 | Fndc10 | fibronectin type III domain containing 10 | | | | | Black Rat | | symbol | gene, protein-coding, MODEL [RefSeq] |
| 1564340 | Fndc11 | fibronectin type III domain containing 11 | ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog); INTERACTS WITH bisphenol A; 17beta-estradiol (ortholog); acrylamide (ortholog) | 3 | 188708045 | 188710670 | Rat | 34 | symbol , PhenoGen | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1601971 | FNDC11 | fibronectin type III domain containing 11 | INTERACTS WITH 17beta-estradiol; acrylamide; arsenite(3-) | 20 | 63553020 | 63556708 | Human | 36 | symbol , COSMIC , Human Proteome Map | gene, protein-coding, VALIDATED [RefSeq] |
| 1614037 | Fndc11 | fibronectin type III domain containing 11 | Orthologous to human FNDC11 (fibronectin type III domain containing 11). [provided by Alliance of Genome Resources, Jul 2025] | 2 | 180854385 | 180864649 | Mouse | 40 | symbol , PhenoGen , description | gene, protein-coding, VALIDATED [RefSeq] |
| 9048564 | Fndc11 | fibronectin type III domain containing 11 | ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog) | NW_004955528 | 670563 | 672995 | Chinchilla | 5 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 11892531 | FNDC11 | fibronectin type III domain containing 11 | ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog) | | | | Bonobo | 5 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12134686 | FNDC11 | fibronectin type III domain containing 11 | ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog) | 24 | 47142804 | 47145305 | Dog | 5 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12641903 | Fndc11 | fibronectin type III domain containing 11 | ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog) | NW_004936514 | 10847406 | 10848415 | Squirrel | 5 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 14005734 | FNDC11 | fibronectin type III domain containing 11 | ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog) | | | | Pig | 5 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18569418 | FNDC11 | fibronectin type III domain containing 11 | ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog) | | | | Green Monkey | 5 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18922767 | Fndc11 | fibronectin type III domain containing 11 | ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog) | | | | Naked Mole-Rat | 5 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 625957239 | Fndc11 | fibronectin type III domain containing 11 | | | | | Black Rat | 4 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 626186316 | fndc11 | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 1304736 | Fndc3a | fibronectin type III domain containing 3a | INVOLVED IN cell-cell adhesion (ortholog); fertilization (ortholog); Sertoli cell development (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; 17beta-estradiol; acetamide | 15 | 54099510 | 54276963 | Rat | 99 | symbol , PhenoGen , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1354235 | FNDC3A | fibronectin type III domain containing 3A | Enables RNA binding activity. Predicted to be involved in spermatid development. Predicted to act upstream of or within Sertoli cell development; cell-cell adhesion; and fertilization. Located in Golgi apparatus. [provided by Alliance of Genome Resources, Jul 2025] | 13 | 48975291 | 49209779 | Human | 99 | symbol , COSMIC , Human Proteome Map , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1551997 | Fndc3a | fibronectin type III domain containing 3A | Acts upstream of or within several processes, including Sertoli cell development; fertilization; and spermatid development. Located in acrosomal vesicle; cytosol; and vesicle membrane. Is expressed in brain; inner ear; limb; and submandibular gland primordium. Orthologous to human FN weight:700;'>FNDC3A (fibronectin type III domain containing 3A). [provided by Alliance of Genome Resources, Jul 2025] | 14 | 72775388 | 72948141 | Mouse | 124 | symbol , PhenoGen , description , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 8965498 | Fndc3a | fibronectin type III domain containing 3A | INVOLVED IN cell-cell adhesion (ortholog); fertilization (ortholog); Sertoli cell development (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) | NW_004955431 | 2553311 | 2696596 | Chinchilla | 10 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12046820 | FNDC3A | fibronectin type III domain containing 3A | INVOLVED IN cell-cell adhesion (ortholog); fertilization (ortholog); Sertoli cell development (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) | 13 | 30119740 | 30347544 | Bonobo | 17 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12074823 | FNDC3A | fibronectin type III domain containing 3A | INVOLVED IN cell-cell adhesion (ortholog); fertilization (ortholog); Sertoli cell development (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) | 22 | 2524173 | 2700223 | Dog | 16 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12492668 | Fndc3a | fibronectin type III domain containing 3A | INVOLVED IN cell-cell adhesion (ortholog); fertilization (ortholog); Sertoli cell development (ortholog); FOUND IN acrosomal vesicle (inferred); cytoplasm (inferred); cytoplasmic vesicle (inferred) | NW_004936565 | 2154672 | 2312670 | Squirrel | 16 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 14276499 | FNDC3A | fibronectin type III domain containing 3A | INVOLVED IN cell-cell adhesion (ortholog); fertilization (ortholog); Sertoli cell development (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) | | | | Pig | 16 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18480150 | FNDC3A | fibronectin type III domain containing 3A | INVOLVED IN cell-cell adhesion (ortholog); fertilization (ortholog); Sertoli cell development (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) | | | | Green Monkey | 16 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18909729 | Fndc3a | fibronectin type III domain containing 3A | INVOLVED IN cell-cell adhesion (ortholog); fertilization (ortholog); Sertoli cell development (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) | | | | Naked Mole-Rat | 16 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 285145168 | fndc3a | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 626060716 | Fndc3a | fibronectin type III domain containing 3A | INVOLVED IN cell-cell adhesion (ortholog); fertilization (ortholog); Sertoli cell development (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) | | | | Black Rat | 10 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 1311673 | Fndc3b | fibronectin type III domain containing 3B | INVOLVED IN cell migration (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); keratoconus (ortholog) ; FOUND IN endoplasmic reticulum (ortholog); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol | 2 | 112240108 | 112546113 | Rat | 152 | symbol , PhenoGen | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1343110 | FNDC3B | fibronectin type III domain containing 3B | Enables RNA binding activity. Predicted to act upstream of or within several processes, including negative regulation of osteoblast differentiation; substrate adhesion-dependent cell spreading; and type II pneumocyte differentiation. Predicted to be located in endoplasmic reticulum. [provided by All iance of Genome Resources, Jul 2025] | 3 | 172039578 | 172401669 | Human | 157 | symbol , COSMIC , Human Proteome Map | gene, protein-coding, VALIDATED [RefSeq] |
| 1551864 | Fndc3b | fibronectin type III domain containing 3B | Acts upstream of or within several processes, including negative regulation of osteoblast differentiation; substrate adhesion-dependent cell spreading; and type II pneumocyte differentiation. Located in endoplasmic reticulum. Is expressed in several structures, including adipose tissue; alimentary s ystem; genitourinary system; nervous system; and respiratory system. Orthologous to human FNDC3B (fibronectin type III domain containing 3B). [provided by Alliance of Genome Resources, Jul 2025] | 3 | 27470284 | 27765469 | Mouse | 172 | symbol , PhenoGen , description | gene, protein-coding, VALIDATED [RefSeq] |
| 8734711 | Fndc3b | fibronectin type III domain containing 3B | INVOLVED IN cell migration (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); keratoconus (ortholog) ; FOUND IN endoplasmic reticulum (ortholog) | NW_004955420 | 2173804 | 2435324 | Chinchilla | 14 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 11819705 | FNDC3B | fibronectin type III domain containing 3B | INVOLVED IN cell migration (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); keratoconus (ortholog) ; FOUND IN endoplasmic reticulum (ortholog) | 3 | 169047205 | 169408664 | Bonobo | 17 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12093968 | FNDC3B | fibronectin type III domain containing 3B | INVOLVED IN cell migration (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); keratoconus (ortholog) ; FOUND IN endoplasmic reticulum (ortholog) | 34 | 36373966 | 36640851 | Dog | 17 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 12558088 | Fndc3b | fibronectin type III domain containing 3B | INVOLVED IN cell migration (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); keratoconus (ortholog) ; FOUND IN endoplasmic reticulum (ortholog) | NW_004936593 | 311245 | 638625 | Squirrel | 17 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 13948113 | FNDC3B | fibronectin type III domain containing 3B | INVOLVED IN cell migration (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); keratoconus (ortholog) ; FOUND IN endoplasmic reticulum (ortholog) | | | | Pig | 17 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18605570 | FNDC3B | fibronectin type III domain containing 3B | INVOLVED IN cell migration (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); keratoconus (ortholog) ; FOUND IN endoplasmic reticulum (ortholog) | | | | Green Monkey | 17 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 18912790 | Fndc3b | fibronectin type III domain containing 3B | INVOLVED IN cell migration (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); keratoconus (ortholog) ; FOUND IN endoplasmic reticulum (ortholog) | | | | Naked Mole-Rat | 17 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 155255047 | fndc3b | | | | | | Tropical Clawed Frog | | symbol | gene, null |
| 625854982 | Fndc3b | fibronectin type III domain containing 3B | INVOLVED IN cell migration (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); keratoconus (ortholog) ; FOUND IN endoplasmic reticulum (ortholog) | | | | Black Rat | 14 | symbol | gene, protein-coding, MODEL [RefSeq] |
| 14383772 | fnta-1 | | | | | | Roundworm | | symbol | gene, null |
| 155238213 | fnta.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 596933730 | fnta.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 596933975 | fnta.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 596936028 | fnta.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 596936098 | fnta.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 155251650 | fnta.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 1350008 | FNTAP1 | farnesyltransferase, CAAX box, alpha pseudogene 1 | | 11 | 86195131 | 86196771 | Human | | symbol , GTEx , COSMIC , Human Proteome Map , old_gene_symbol | gene, pseudo, INFERRED [RefSeq] |
| 1348177 | FNTAP2 | farnesyltransferase, CAAX box, alpha pseudogene 2 | | 13 | 21530686 | 21531834 | Human | | symbol , COSMIC , Human Proteome Map , old_gene_symbol | gene, pseudo, INFERRED [RefSeq] |
| 14374418 | fntb-1 | | | | | | Roundworm | | symbol | gene, null |
| 155249130 | fntb.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 155247314 | fntb.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 155248559 | fnbp1.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 7174910 | FNBP1P1 | formin binding protein 1 pseudogene 1 | ASSOCIATED WITH anthracosis; INTERACTS WITH aristolochic acid A; GSK-J4 | 2 | 74120519 | 74121816 | Human | 3 | symbol , COSMIC , Human Proteome Map | gene, pseudo, INFERRED [RefSeq] |
| 7174903 | FNBP1P2 | formin binding protein 1 pseudogene 2 | | 3 | 30808678 | 30809696 | Human | | symbol , GTEx , COSMIC , Human Proteome Map | gene, pseudo, INFERRED [RefSeq] |
| 288083079 | fnbp4.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 285385708 | fndc1.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 284538534 | fndc1.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 2294491 | Fndc10l | ibronectin type III domain containing 10 like | | 2 | 149198568 | 149199585 | Mouse | | symbol , PhenoGen | gene, pseudo, INFERRED [RefSeq] |
| 1563846 | Fndc3c1 | fibronectin type III domain containing 3C1 | FOUND IN membrane (inferred); INTERACTS WITH 17beta-estradiol; 2,3,7,8-Tetrachlorodibenzofuran; 2-methoxyethanol | X | 75562242 | 75630812 | Rat | 12 | symbol , PhenoGen | gene, protein-coding, INFERRED [RefSeq] |
| 1617963 | Fndc3c1 | fibronectin type III domain containing 3C1 | Predicted to be located in membrane. Is expressed in embryo; embryo endoderm; and extraembryonic ectoderm. [provided by Alliance of Genome Resources, Jul 2025] | X | 105463647 | 105529436 | Mouse | 6 | symbol , PhenoGen , old_gene_symbol | gene, protein-coding, PROVISIONAL [RefSeq] |
| 4889207 | FNDC3CP | fibronectin type III domain containing 3C, pseudogene | | X | 78165696 | 78170137 | Human | | symbol , COSMIC , Human Proteome Map | gene, pseudo, INFERRED [RefSeq] |
| 155256387 | fndc4.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 155259752 | fndc4.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 155242128 | fndc7.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 405856090 | fndc7.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 405861476 | fndc7.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 405861927 | fndc7.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 405862864 | fndc7.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 626469284 | fndc7.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 155245175 | fnip1.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 155248386 | fnip1.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 155249575 | fnip2.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 155244307 | fnip2.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 155241539 | fn3krp.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 155243714 | fnbp1l.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 155256372 | fnbp1l.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 405856981 | fndc10.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 405857740 | fndc10.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 405858216 | fndc10.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 405864438 | fndc10.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 626173978 | fndc10.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 405857559 | fndc10.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 405858906 | fndc10.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 405861427 | fndc10.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 405862880 | fndc10.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 626178075 | fndc10.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 285142992 | fndc3a.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 288083109 | fndc3a.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 155254766 | fndc3b.L | | | | | | African Clawed Frog | | symbol | gene, null |
| 155232346 | fndc3b.S | | | | | | African Clawed Frog | | symbol | gene, null |
| 38627293 | FNDC1-AS1 | FNDC1 antisense RNA 1 | | 6 | 159165899 | 159170007 | Human | | symbol , COSMIC , name , Human Proteome Map | gene, ncrna, VALIDATED [RefSeq] |
| 6481027 | FNDC1-IT1 | FNDC1 intronic transcript 1 | | 6 | 159240752 | 159243329 | Human | | symbol , COSMIC , name , Human Proteome Map | gene, ncrna, VALIDATED [RefSeq] |
| 5507996 | CHURC1-FNTB | CHURC1-FNTB readthrough | This locus represents naturally occurring read-through transcription between the neighboring CHURC1 (churchill domain containing 1) and FNTB (farnesyltransferase, CAAX box, beta) on chromosome 14. The read-through transcript produces a fusion protein that shares sequence identity with each individual gene product. [provided by RefSeq, Feb 2011] | 14 | 64914361 | 65062655 | Human | 43 | symbol , ensembl_gene_symbol , COSMIC , name , description , Human Proteome Map , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1352384 | ALX3 | ALX homeobox 3 | This gene encodes a nuclear protein with a homeobox DNA-binding domain that functions as a transcriptional regulator involved in cell-type differentiation and development. Preferential methylation of this gene's promoter is associated with advanced-stage neuroblastoma tumors. [provided by RefSeq, Ju l 2008] | 1 | 110059870 | 110070672 | Human | 182 | old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 62039 | Plk3 | polo-like kinase 3 | ENCODES a protein that exhibits p53 binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); DNA damage response (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN tuberculosis pathway; ASSOCIATED WITH breast carcinoma (ortholog); COVID-19 (ortholog); ovary epithelial cancer (ortholog); FOUND IN dendrite; neuronal cell body; centrosome (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 4-amino-2,6-dinitrotoluene | 5 | 135843725 | 135848900 | Rat | 307 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 62331 | Plk3 | polo like kinase 3 | This gene encodes a member of the highly conserved polo-like kinase family of serine/threonine kinases. Members of this family are characterized by an amino-terminal catalytic domain and a carboxy-terminal bipartite polo box domain that functions as a substrate-binding motif and a cellular localizat ion signal. Polo-like kinases have primarily been implicated in cell cycle regulation. In mouse, this protein that has been reported to localize to the nucleolus during interphase but is undetectable during mitosis, following nucleolus dissociation during prophase. The protein relocalizes to the nucleolus just prior to cytokinesis and peak levels are detected during G1 of interphase. This gene has been implicated in regulation of entry into S phase, with RNAi-induced depletion resulting in failure to re-enter the cell cycle. Mice deficient for this gene exhibit increased weight and tumor development at advanced age. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2015] | 4 | 116985852 | 116991244 | Mouse | 286 | old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 1350781 | PLK3 | polo like kinase 3 | The protein encoded by this gene is a member of the highly conserved polo-like kinase family of serine/threonine kinases. Members of this family are characterized by an amino-terminal kinase domain and a carboxy-terminal bipartite polo box domain that functions as a substrate-binding motif and a cel lular localization signal. Polo-like kinases are important regulators of cell cycle progression. This gene has also been implicated in stress responses and double-strand break repair. In human cell lines, this protein is reported to associate with centrosomes in a microtubule-dependent manner, and during mitosis, the protein becomes localized to the mitotic apparatus. Expression of a kinase-defective mutant results in abnormal cell morphology caused by changes in microtubule dynamics and mitotic arrest followed by apoptosis. [provided by RefSeq, Sep 2015] | 1 | 44800377 | 44805990 | Human | 284 | old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 1322845 | Prpf40a | pre-mRNA processing factor 40A | Enables proline-rich region binding activity. Predicted to be involved in several processes, including mRNA splicing, via spliceosome; regulation of cell shape; and regulation of cytokinesis. Located in nuclear matrix. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; respiratory system; and sensory organ. Orthologous to human PRPF40A (pre-mRNA processing factor 40 homolog A). [provided by Alliance of Genome Resources, Jul 2025] | 2 | 53024714 | 53081450 | Mouse | 118 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1319742 | Smco4 | single-pass membrane protein with coiled-coil domains 4 | Predicted to be located in membrane. Orthologous to human SMCO4 (single-pass membrane protein with coiled-coil domains 4). [provided by Alliance of Genome Resources, Jul 2025] | 9 | 15379736 | 15456556 | Mouse | 71 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1601987 | SMCO4 | single-pass membrane protein with coiled-coil domains 4 | Predicted to be located in membrane. [provided by Alliance of Genome Resources, Jul 2025] | 11 | 93478472 | 93553979 | Human | 68 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1614456 | Srgap2 | SLIT-ROBO Rho GTPase activating protein 2 | Enables GTPase activator activity; protein homodimerization activity; and small GTPase binding activity. Involved in several processes, including filopodium assembly; nervous system development; and positive regulation of GTPase activity. Located in cytosol; phagocytic vesicle; and postsynaptic memb rane. Is active in dendritic spine; glutamatergic synapse; and postsynaptic density. Is expressed in several structures, including central nervous system; dorsal root ganglion; heart; and sensory organ. Orthologous to human SRGAP2 (SLIT-ROBO Rho GTPase activating protein 2). [provided by Alliance of Genome Resources, Jul 2025] | 1 | 131212989 | 131455269 | Mouse | 170 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1550230 | Tnfrsf12a | tumor necrosis factor receptor superfamily, member 12a | Involved in regulation of angiogenesis. Acts upstream of or within extrinsic apoptotic signaling pathway; positive regulation of axon extension; and substrate-dependent cell migration, cell attachment to substrate. Located in cell surface; plasma membrane; and ruffle. Is expressed in several structu res, including adrenal medulla; alimentary system; genitourinary system; heart; and limb long bone. Orthologous to human TNFRSF12A (TNF receptor superfamily member 12A). [provided by Alliance of Genome Resources, Jul 2025] | 17 | 23894419 | 23896423 | Mouse | 321 | old_gene_name , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1557749 | Zfp1 | zinc finger protein 1 | Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in several structures, including central nervous system; hemolymphoid system gland; liver; reproductive system; and urinary system. Orthologous to human ZFP1 (ZFP1 zinc finger protein). [provided by Alliance of Genome Resources, Apr 2025] | 8 | 112366606 | 112397740 | Mouse | 55 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1558434 | Zfp2 | zinc finger protein 2 | Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is expressed in several structures, incl uding nervous system; urinary system; and vertebral pre-cartilage condensation. Orthologous to human ZFP2 (ZFP2 zinc finger protein). [provided by Alliance of Genome Resources, Jul 2025] | 11 | 50788092 | 50807043 | Mouse | 46 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1619034 | Zfp3 | zinc finger protein 3 | Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II; regulation of cytokine production; a nd regulation of immune system process. Predicted to be located in nucleus. Predicted to be active in nucleoplasm. Is expressed in central nervous system and genitourinary system. Orthologous to human ZFP3 (ZFP3 zinc finger protein). [provided by Alliance of Genome Resources, Jul 2025] | 11 | 70655273 | 70663754 | Mouse | 47 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 732877 | ALX1 | ALX homeobox 1 | The specific function of this gene has yet to be determined in humans; however, in rodents, it is necessary for survival of the forebrain mesenchyme and may also be involved in development of the cervix. Mutations in the mouse gene lead to neural tube defects such as acrania and meroanencephaly. [provided by RefSeq, Jul 2008] | 12 | 85280220 | 85301784 | Human | 201 | old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 1320963 | ALX4 | ALX homeobox 4 | This gene encodes a paired-like homeodomain transcription factor expressed in the mesenchyme of developing bones, limbs, hair, teeth, and mammary tissue. Mutations in this gene cause parietal foramina 2 (PFM2); an autosomal dominant disease characterized by deficient ossification of the parietal bon es. Mutations in this gene also cause a form of frontonasal dysplasia with alopecia and hypogonadism; suggesting a role for this gene in craniofacial development, mesenchymal-epithelial communication, and hair follicle development. Deletion of a segment of chromosome 11 containing this gene, del(11)(p11p12), causes Potocki-Shaffer syndrome (PSS); a syndrome characterized by craniofacial anomalies, cognitive disability, multiple exostoses, and genital abnormalities in males. In mouse, this gene has been shown to use dual translation initiation sites located 16 codons apart. [provided by RefSeq, Oct 2009] | 11 | 44260440 | 44310139 | Human | 299 | old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 1620059 | Fmnl1 | formin-like 1 | Enables several functions, including GTPase activating protein binding activity; profilin binding activity; and small GTPase binding activity. Involved in actin filament severing. Acts upstream of or within substrate-dependent cell migration. Located in cytosol; phagocytic vesicle; and plasma membra ne. Is expressed in several structures, including gut; heart; immune system; liver; and lung. Orthologous to human FMNL1 (formin like 1). [provided by Alliance of Genome Resources, Jul 2025] | 11 | 103061401 | 103089727 | Mouse | 89 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1623828 | Il20rb | interleukin 20 receptor beta | Enables interleukin-20 binding activity. Acts upstream of or within several processes, including CD8-positive, alpha-beta T cell homeostasis; negative regulation of type IV hypersensitivity; and regulation of cytokine production. Predicted to be active in plasma membrane. Is expressed in foregut; ma le reproductive gland or organ; metanephros; skin; and thymus. Orthologous to human IL20RB (interleukin 20 receptor subunit beta). [provided by Alliance of Genome Resources, Jul 2025] | 9 | 100339772 | 100368526 | Mouse | 126 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 10817 | Itga5 | integrin alpha 5 (fibronectin receptor alpha) | The product of this gene belongs to the integrin alpha chain family. Integrins are heterodimeric integral membrane proteins composed of an alpha chain and a beta chain. This gene encodes the integrin alpha 5 chain, which is proteolytically processed to generate light and heavy chains that join with beta 1 to form a fibronectin receptor. In addition to adhesion, integrins are known to participate in cell-surface mediated signaling. Integrin alpha 5 and integrin alpha V chains are produced by distinct genes. Homozygous knockout mice for this gene exhibit embryonic lethality. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2015] | 15 | 103252713 | 103275218 | Mouse | 343 | old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 1351478 | ITGA5 | integrin subunit alpha 5 | The product of this gene belongs to the integrin alpha chain family. Integrins are heterodimeric integral membrane proteins composed of an alpha subunit and a beta subunit that function in cell surface adhesion and signaling. The encoded preproprotein is proteolytically processed to generate light a nd heavy chains that comprise the alpha 5 subunit. This subunit associates with the beta 1 subunit to form a fibronectin receptor. This integrin may promote tumor invasion, and higher expression of this gene may be correlated with shorter survival time in lung cancer patients. Note that the integrin alpha 5 and integrin alpha V subunits are encoded by distinct genes. [provided by RefSeq, Oct 2015] | 12 | 54395261 | 54419266 | Human | 318 | old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 736631 | ITGB1 | integrin subunit beta 1 | Integrins are heterodimeric proteins made up of alpha and beta subunits. At least 18 alpha and 8 beta subunits have been described in mammals. Integrin family members are membrane receptors involved in cell adhesion and recognition in a variety of processes including embryogenesis, hemostasis, tissu e repair, immune response and metastatic diffusion of tumor cells. This gene encodes a beta subunit. Multiple alternatively spliced transcript variants which encode different protein isoforms have been found for this gene. [provided by RefSeq, Jul 2008] | 10 | 32900318 | 32958230 | Human | 710 | old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 18917316 | LOC101703640 | protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha | ENCODES a protein that exhibits CAAX-protein geranylgeranyltransferase activity (inferred); prenyltransferase activity (inferred); protein farnesyltransferase activity (inferred); FOUND IN CAAX-protein geranylgeranyltransferase complex (inferred); cytoplasm (inferred); protein farnesyltransferase co mplex (inferred) | | | | Naked Mole-Rat | 9 | old_gene_symbol | gene, protein-coding, MODEL [RefSeq] |
| 12470486 | LOC101978376 | protein farnesyltransferase subunit beta | ENCODES a protein that exhibits geranylgeranyl diphosphate synthase activity (ortholog); peptide binding (ortholog); protein farnesyltransferase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); negative regulation of cell population proliferation (ortholog); positive regulati on of cell cycle (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN microtubule associated complex (inferred); protein farnesyltransferase complex (inferred) | NW_004936495 | 8637103 | 8713952 | Squirrel | 51 | old_gene_symbol | gene, protein-coding, MODEL [RefSeq] |
| 631329 | Tnfrsf12a | TNF receptor superfamily member 12A | INVOLVED IN positive regulation of collagen biosynthetic process; cell adhesion (ortholog); extrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN cytokine mediated signaling pathway; ASSOCIATED WITH Pulmonary Arterial Hypertension; acute kidney failure (ortholog); Experimental Liver Cirr hosis (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); ruffle (ortholog); INTERACTS WITH (+)-schisandrin B; 1,3-dinitrobenzene; 1-naphthyl isothiocyanate | 10 | 13211670 | 13213666 | Rat | 317 | old_gene_symbol | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1343569 | TNFRSF12A | TNF receptor superfamily member 12A | Involved in positive regulation of extrinsic apoptotic signaling pathway and regulation of wound healing. Predicted to be located in cell surface and ruffle. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Apr 2025] | 16 | 3020368 | 3022383 | Human | 320 | old_gene_name , old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 14276635 | TNFRSF12A | TNF receptor superfamily member 12A | INVOLVED IN cell adhesion (ortholog); extrinsic apoptotic signaling pathway (ortholog); positive regulation of axon extension (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Experimental Liver Cirrhosis (ortholog); myocardial infarction (ortholog); FOUND IN cell surface (inferred); memb rane (inferred); plasma membrane (inferred); INTERACTS WITH deoxynivalenol; dichlorine | | | | Pig | 34 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 731289 | ADRB1 | adrenoceptor beta 1 | The adrenergic receptors (subtypes alpha 1, alpha 2, beta 1, and beta 2) are a prototypic family of guanine nucleotide binding regulatory protein-coupled receptors that mediate the physiological effects of the hormone epinephrine and the neurotransmitter norepinephrine. Beta-1 adrenoceptors are pred ominately located in the heart. Specific polymorphisms in this gene have been shown to affect the resting heart rate and can be involved in heart failure. [provided by RefSeq, Sep 2019] | 10 | 114043866 | 114046904 | Human | 422 | old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 731061 | BHLHE41 | basic helix-loop-helix family member e41 | This gene encodes a basic helix-loop-helix protein expressed in various tissues. The encoded protein can interact with ARNTL or compete for E-box binding sites in the promoter of PER1 and repress CLOCK/ARNTL's transactivation of PER1. This gene is believed to be involved in the control of circadian rhythm and cell differentiation. Defects in this gene are associated with the short sleep phenotype. [provided by RefSeq, Feb 2014] | 12 | 26120030 | 26125037 | Human | 195 | old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 1353681 | DIPK1C | divergent protein kinase domain 1C | This gene encodes a member of the FAM69 family of cysteine-rich type II transmembrane proteins. These proteins localize to the endoplasmic reticulum but their specific functions are unknown. [provided by RefSeq, Nov 2011] | 18 | 74434775 | 74464648 | Human | 51 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1349896 | IL20RB | interleukin 20 receptor subunit beta | IL20RB and IL20RA (MIM 605620) form a heterodimeric receptor for interleukin-20 (IL20; MIM 605619) (Blumberg et al., 2001 [PubMed 11163236]).[supplied by OMIM, Feb 2009] | 3 | 136957983 | 137011085 | Human | 120 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1352514 | ITGB1P1 | integrin subunit beta 1 pseudogene 1 | INTERACTS WITH lead diacetate | 19 | 14622221 | 14623288 | Human | 1 | old_gene_symbol | gene, pseudo, INFERRED [RefSeq] |
| 1347629 | NPSR1 | neuropeptide S receptor 1 | This gene encodes a member of the vasopressin/oxytocin subfamily of G protein-coupled receptors. The encoded membrane protein acts as a receptor for neuropeptide S and affects a variety of cellular processes through its signaling. Increased expression of this gene in ciliated cells of the respirator y epithelium and in bronchial smooth muscle cells is associated with asthma. Polymorphisms in this gene have also been associated with asthma susceptibility, panic disorders, inflammatory bowel disease, and rheumatoid arthritis. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2014] | 7 | 34658218 | 34878332 | Human | 72 | old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 1311401 | Prpf40a | pre-mRNA processing factor 40A | ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN mRNA cis splicing, via spliceosome (inferred); mRNA processing (inferred); RNA splicing (inferred); PARTICIPATES IN spliceosome pathway; FOUND IN nuclear matrix (ortholog); nuclear speck (ortholog); nucleus (ortholog ); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene | 3 | 58036779 | 58098996 | Rat | 106 | old_gene_symbol | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1322844 | PRPF40A | pre-mRNA processing factor 40A | Enables RNA binding activity. Involved in several processes, including cytoskeleton organization; regulation of cell shape; and regulation of cytokinesis. Located in nuclear matrix and nuclear speck. [provided by Alliance of Genome Resources, Jul 2025] | 2 | 152651732 | 152718019 | Human | 116 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1603684 | SRGAP2 | SLIT-ROBO Rho GTPase activating protein 2 | This locus encodes a member of the SLIT-ROBO Rho GTPase activating protein family. The encoded protein stimulates GTPase activity of Rac1, and plays a role in cortical neuron development. This locus has several paralogs on human chromosome 1 resulting from segmental duplication. While this locus its elf is conserved among various species, the paralogs are found only in the genus Homo, and not in the genomes of non-human great apes. Alternatively spliced transcript variants have been described for this locus. [provided by RefSeq, Jul 2014] | 1 | 206203541 | 206464436 | Human | 155 | old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 1318420 | ATAD1 | ATPase family AAA domain containing 1 | Predicted to enable ATP hydrolysis activity. Involved in extraction of mislocalized protein from mitochondrial outer membrane. Located in mitochondrial outer membrane and peroxisomal membrane. Implicated in hyperekplexia 4. [provided by Alliance of Genome Resources, Jul 2025] | 10 | 87751512 | 87841361 | Human | 159 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1345926 | KRT16 | keratin 16 | The protein encoded by this gene is a member of the keratin gene family. The keratins are intermediate filament proteins responsible for the structural integrity of epithelial cells and are subdivided into cytokeratins and hair keratins. Most of the type I cytokeratins consist of acidic proteins whi ch are arranged in pairs of heterotypic keratin chains and are clustered in a region of chromosome 17q12-q21. This keratin has been coexpressed with keratin 14 in a number of epithelial tissues, including esophagus, tongue, and hair follicles. Mutations in this gene are associated with type 1 pachyonychia congenita, non-epidermolytic palmoplantar keratoderma and unilateral palmoplantar verrucous nevus. [provided by RefSeq, Jul 2008] | 17 | 41609778 | 41612767 | Human | 210 | old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 1349875 | MKRN3-AS1 | MKRN3 antisense RNA 1 | ASSOCIATED WITH Abdominal obesity; Acromicria; Adrenal insufficiency | | | | Human | 95 | old_gene_symbol | gene, ncrna |
| 736735 | RHD | Rh blood group D antigen | The Rh blood group system is the second most clinically significant of the blood groups, second only to ABO. It is also the most polymorphic of the blood groups, with variations due to deletions, gene conversions, and missense mutations. The Rh blood group includes this gene, which encodes the RhD p rotein, and a second gene that encodes both the RhC and RhE antigens on a single polypeptide. The two genes, and a third unrelated gene, are found in a cluster on chromosome 1. The classification of Rh-positive and Rh-negative individuals is determined by the presence or absence of the highly immunogenic RhD protein on the surface of erythrocytes. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008] | 1 | 25272486 | 25330445 | Human | 92 | GenBank Protein , GenBank Nucleotide , old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 1601722 | MDP1 | magnesium dependent phosphatase 1 | Predicted to enable acid phosphatase activity. Predicted to be involved in chromatin remodeling. [provided by Alliance of Genome Resources, Apr 2025] | 14 | 24213943 | 24216066 | Human | 55 | old_gene_symbol | gene, protein-coding, VALIDATED [RefSeq] |
| 1344610 | TRPV3 | transient receptor potential cation channel subfamily V member 3 | This gene product belongs to a family of nonselective cation channels that function in a variety of processes, including temperature sensation and vasoregulation. The thermosensitive members of this family are expressed in subsets of sensory neurons that terminate in the skin, and are activated at d istinct physiological temperatures. This channel is activated at temperatures between 22 and 40 degrees C. This gene lies in close proximity to another family member gene on chromosome 17, and the two encoded proteins are thought to associate with each other to form heteromeric channels. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Apr 2012] | 17 | 3510502 | 3557812 | Human | 221 | old_gene_symbol | gene, protein-coding, REVIEWED [RefSeq] |
| 1349444 | HLA-A | major histocompatibility complex, class I, A | HLA-A belongs to the HLA class I heavy chain paralogues. This class I molecule is a heterodimer consisting of a heavy chain and a light chain (beta-2 microglobulin). The heavy chain is anchored in the membrane. Class I molecules play a central role in the immune system by presenting peptides derived from the endoplasmic reticulum lumen so that they can be recognized by cytotoxic T cells. They are expressed in nearly all cells. The heavy chain is approximately 45 kDa and its gene contains 8 exons. Exon 1 encodes the leader peptide, exons 2 and 3 encode the alpha1 and alpha2 domains, which both bind the peptide, exon 4 encodes the alpha3 domain, exon 5 encodes the transmembrane region, and exons 6 and 7 encode the cytoplasmic tail. Polymorphisms within exon 2 and exon 3 are responsible for the peptide binding specificity of each class one molecule. Typing for these polymorphisms is routinely done for bone marrow and kidney transplantation. More than 6000 HLA-A alleles have been described. The HLA system plays an important role in the occurrence and outcome of infectious diseases, including those caused by the malaria parasite, the human immunodeficiency virus (HIV), and the severe acute respiratory syndrome coronavirus (SARS-CoV). The structural spike and the nucleocapsid proteins of the novel coronavirus SARS-CoV-2, which causes coronavirus disease 2019 (COVID-19), are reported to contain multiple Class I epitopes with predicted HLA restrictions. Individual HLA genetic variation may help explain different immune responses to a virus across a population.[provided by RefSeq, Aug 2020] | 6 | 29942532 | 29945870 | Human | 301 | UniProt , GenBank Protein , GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1352836 | HLA-B | major histocompatibility complex, class I, B | HLA-B belongs to the HLA class I heavy chain paralogues. This class I molecule is a heterodimer consisting of a heavy chain and a light chain (beta-2 microglobulin). The heavy chain is anchored in the membrane. Class I molecules play a central role in the immune system by presenting peptides derived from the endoplasmic reticulum lumen. They are expressed in nearly all cells. The heavy chain is approximately 45 kDa and its gene contains 8 exons. Exon 1 encodes the leader peptide, exon 2 and 3 encode the alpha1 and alpha2 domains, which both bind the peptide, exon 4 encodes the alpha3 domain, exon 5 encodes the transmembrane region and exons 6 and 7 encode the cytoplasmic tail. Polymorphisms within exon 2 and exon 3 are responsible for the peptide binding specificity of each class one molecule. Typing for these polymorphisms is routinely done for bone marrow and kidney transplantation. Hundreds of HLA-B alleles have been described. [provided by RefSeq, Jul 2008] | 6 | 31353875 | 31357179 | Human | 574 | UniProt , GenBank Protein , GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1347386 | HLA-DPB1 | major histocompatibility complex, class II, DP beta 1 | HLA-DPB belongs to the HLA class II beta chain paralogues. This class II molecule is a heterodimer consisting of an alpha (DPA) and a beta chain (DPB), both anchored in the membrane. It plays a central role in the immune system by presenting peptides derived from extracellular proteins. Class II mol ecules are expressed in antigen presenting cells (APC: B lymphocytes, dendritic cells, macrophages). The beta chain is approximately 26-28 kDa and its gene contains 6 exons. Exon one encodes the leader peptide, exons 2 and 3 encode the two extracellular domains, exon 4 encodes the transmembrane domain and exon 5 encodes the cytoplasmic tail. Within the DP molecule both the alpha chain and the beta chain contain the polymorphisms specifying the peptide binding specificities, resulting in up to 4 different molecules. [provided by RefSeq, Jul 2008] | 6 | 33075990 | 33089696 | Human | 296 | UniProt , old_protein_id , GenBank Nucleotide , UniProt Secondary | gene, protein-coding, REVIEWED [RefSeq] |
| 1349823 | HLA-DRB1 | major histocompatibility complex, class II, DR beta 1 | HLA-DRB1 belongs to the HLA class II beta chain paralogs. The class II molecule is a heterodimer consisting of an alpha (DRA) and a beta chain (DRB), both anchored in the membrane. It plays a central role in the immune system by presenting peptides derived from extracellular proteins. Class II molec ules are expressed in antigen presenting cells. The beta chain is approximately 26-28 kDa. It is encoded by 6 exons. Exon one encodes the leader peptide; exons 2 and 3 encode the two extracellular domains; exon 4 encodes the transmembrane domain; and exon 5 encodes the cytoplasmic tail. Within the DR molecule the beta chain contains all the polymorphisms specifying the peptide binding specificities. Hundreds of DRB1 alleles have been described and some alleles have increased frequencies associated with certain diseases or conditions. For example, DRB1*1302 has been related to acute and chronic hepatitis B virus persistence. There are multiple pseudogenes of this gene. [provided by RefSeq, Jul 2020] | 6 | 32578775 | 32589848 | Human | 861 | UniProt , old_protein_id , GenBank Protein , GenBank Nucleotide , UniProt Secondary | gene, protein-coding, REVIEWED [RefSeq] |
| 40911595 | LOC119865732 | fibronectin type III domain containing 11 | INVOLVED IN cell differentiation (inferred) | | | | Dog | 1 | ensembl_gene_symbol | gene, protein-coding, MODEL [RefSeq] |
| 1342972 | ABL1 | ABL proto-oncogene 1, non-receptor tyrosine kinase | This gene is a protooncogene that encodes a protein tyrosine kinase involved in a variety of cellular processes, including cell division, adhesion, differentiation, and response to stress. The activity of the protein is negatively regulated by its SH3 domain, whereby deletion of the region encoding this domain results in an oncogene. The ubiquitously expressed protein has DNA-binding activity that is regulated by CDC2-mediated phosphorylation, suggesting a cell cycle function. This gene has been found fused to a variety of translocation partner genes in various leukemias, most notably the t(9;22) translocation that results in a fusion with the 5' end of the breakpoint cluster region gene (BCR; MIM:151410). Alternative splicing of this gene results in two transcript variants, which contain alternative first exons that are spliced to the remaining common exons. [provided by RefSeq, Aug 2014] | 9 | 130713043 | 130887675 | Human | 785 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 730884 | ABO | ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase | This gene encodes proteins related to the first discovered blood group system, ABO. Variation in the ABO gene (chromosome 9q34.2) is the basis of the ABO blood group, thus the presence of an allele determines the blood group in an individual. The 'O' blood group is caused by a deletion of guanine-25 8 near the N-terminus of the protein which results in a frameshift and translation of an almost entirely different protein. Individuals with the A, B, and AB alleles express glycosyltransferase activities that convert the H antigen into the A or B antigen. Other minor alleles have been found for this gene. [provided by RefSeq, Apr 2022] | 9 | 133250401 | 133275201 | Human | 99 | GenBank Protein , GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1311878 | Actr8 | actin related protein 8 | ENCODES a protein that exhibits ATP binding (inferred); nucleotide binding (inferred); INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN Ino80 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; cadmium dichloride | 16 | 5170649 | 5192883 | Rat | 72 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1349497 | AFG1L | AFG1 like ATPase | This gene encodes a mitochondrial integral membrane protein that plays a role in mitochondrial protein homeostasis. The protein contains a P-loop motif and a five-domain structure that is conserved in fly, yeast, and bacteria. It functions to mediate the degradation of nuclear-encoded complex IV sub units. Two conserved estrogen receptor binding sites are located within 2.5 kb of this gene. Polymorphisms in this gene have been associated with bipolar disorder. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Apr 2016] | 6 | 108295054 | 108526001 | Human | 70 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1616513 | Agbl1 | ATP/GTP binding protein-like 1 | Enables metallocarboxypeptidase activity and tubulin binding activity. Involved in C-terminal protein deglutamylation and protein side chain deglutamylation. Predicted to be located in cytosol. Predicted to be active in cytoplasm and microtubule cytoskeleton. Is expressed in several structures, incl uding central nervous system; early embryo; genitourinary system; liver; and retina. Human ortholog(s) of this gene implicated in Fuchs' endothelial dystrophy. Orthologous to human AGBL1 (AGBL carboxypeptidase 1). [provided by Alliance of Genome Resources, Jul 2025] | 7 | 75879311 | 76774446 | Mouse | 71 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1616676 | Agbl4 | ATP/GTP binding protein-like 4 | Enables metallocarboxypeptidase activity and tubulin binding activity. Involved in C-terminal protein deglutamylation; defense response to virus; and protein side chain deglutamylation. Acts upstream of or within several processes, including axonal transport of mitochondrion; positive regulation of ubiquitin-dependent protein catabolic process; and regulation of blastocyst development. Located in cytosol. Is expressed in brain; early embryo; nose; and trigeminal ganglion. Orthologous to human AGBL4 (AGBL carboxypeptidase 4). [provided by Alliance of Genome Resources, Jul 2025] | 4 | 110254823 | 111521521 | Mouse | 113 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1560041 | Agfg1 | ArfGAP with FG repeats 1 | ENCODES a protein that exhibits DNA binding (inferred); GTPase activator activity (inferred); metal ion binding (inferred); INVOLVED IN acrosome assembly (ortholog); intermediate filament organization (ortholog); spermatid nucleus differentiation (ortholog); PARTICIPATES IN influenza A pathway; ASSO CIATED WITH Experimental Liver Cirrhosis (ortholog); oligoasthenoteratozoospermia (ortholog); FOUND IN cell projection (ortholog); cytoplasmic vesicle (ortholog); neuronal cell body (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3,3',5,5'-tetrabromobisphenol A; 4,4'-diaminodiphenylmethane | 9 | 91572962 | 91630688 | Rat | 110 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1564895 | Ahcyl2 | adenosylhomocysteinase-like 2 | INVOLVED IN one-carbon metabolic process (inferred); PARTICIPATES IN cysteine and methionine metabolic pathway; ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); neuron projection (ortholog); INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-t hiouracil | 4 | 59348747 | 59498503 | Rat | 94 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 14237900 | AMELY | amelogenin, Y-linked | INVOLVED IN biomineral tissue development (inferred); FOUND IN extracellular matrix (inferred) | | | | Pig | 2 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 70369 | AQP1 | aquaporin 1 (Colton blood group) | This gene encodes a small integral membrane protein with six bilayer spanning domains that functions as a water channel protein. This protein permits passive transport of water along an osmotic gradient. This gene is a possible candidate for disorders involving imbalance in ocular fluid movement. [p rovided by RefSeq, Aug 2016] | 7 | 30911853 | 30925516 | Human | 461 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1315084 | ART4 | ADP-ribosyltransferase 4 (inactive) (Dombrock blood group) | This gene encodes a protein that contains a mono-ADP-ribosylation (ART) motif. It is a member of the ADP-ribosyltransferase gene family but enzymatic activity has not been demonstrated experimentally. Antigens of the Dombrock blood group system are located on the gene product, which is glycosylphosp hatidylinosotol-anchored to the erythrocyte membrane. Allelic variants, some of which lead to adverse transfusion reactions, are known. [provided by RefSeq, Jul 2008] | 12 | 14825569 | 14843526 | Human | 83 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 14265968 | ATF6 | activating transcription factor 6 | ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN positive regulation of autophagy (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATE D WITH achromatopsia (ortholog); achromatopsia 7 (ortholog); asbestosis (ortholog); FOUND IN endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred); Golgi apparatus (inferred); INTERACTS WITH 3-acetyldeoxynivalenol; 4-phenylbutyric acid; benzo[a]pyrene | | | | Pig | 91 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 12371838 | ATOH8 | atonal bHLH transcription factor 8 | ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); DNA-binding transcription factor binding (inferred); INVOLVED IN anatomical structure formation involved in morphogenesis (inferred); formation of primary germ layer (inferred); myoblast pro liferation (inferred); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (inferred); nuclear speck (inferred); nucleoplasm (inferred) | 17 | 39255725 | 39280022 | Dog | 31 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 620052 | Atp5mc3 | ATP synthase membrane subunit c locus 3 | ENCODES a protein that exhibits ligand-gated channel activity; INVOLVED IN pore complex assembly; response to (R)-carnitine; response to ethanol; PARTICIPATES IN Alzheimer's disease pathway; Huntington's disease pathway; oxidative phosphorylation pathway; ASSOCIATED WITH COVID-19 (ortholog); early-o nset dystonia and/or spastic paraplegia (ortholog); genetic disease (ortholog); FOUND IN cation channel complex; mitochondrion (ortholog); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene | 3 | 79218014 | 79220664 | Rat | 116 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 14260592 | B4GALT7 | beta-1,4-galactosyltransferase 7 | ENCODES a protein that exhibits beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (inferred); galactosyltransferase activity (inferred); glycosyltransferase activity (inferred); INVOLVED IN carbohydrate metabolic process (inferred); glycoprotein biosynthetic process (infe rred); glycosaminoglycan biosynthetic process (inferred); ASSOCIATED WITH BCARD syndrome (ortholog); Craniofacial Abnormalities (ortholog); Desbuquois dysplasia (ortholog); FOUND IN Golgi apparatus (inferred); Golgi cisterna membrane (inferred); Golgi membrane (inferred) | | | | Pig | 39 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 68545 | BCAM | basal cell adhesion molecule (Lutheran blood group) | This gene encodes Lutheran blood group glycoprotein, a member of the immunoglobulin superfamily and a receptor for the extracellular matrix protein, laminin. The protein contains five extracellular immunoglobulin domains, a single transmembrane domain, and a short C-terminal cytoplasmic tail. This p rotein may play a role in epithelial cell cancer and in vaso-occlusion of red blood cells in sickle cell disease. Polymorphisms in this gene define some of the antigens in the Lutheran system and also the Auberger system. Inactivating variants of this gene result in the recessive Lutheran null phenotype, Lu(a-b-), of the Lutheran blood group. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2012] | 19 | 44809059 | 44821421 | Human | 134 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1317506 | BCR | BCR activator of RhoGEF and GTPase | A reciprocal translocation between chromosomes 22 and 9 produces the Philadelphia chromosome, which is often found in patients with chronic myelogenous leukemia. The chromosome 22 breakpoint for this translocation is located within the BCR gene. The translocation produces a fusion protein which is e ncoded by sequence from both BCR and ABL, the gene at the chromosome 9 breakpoint. Although the BCR-ABL fusion protein has been extensively studied, the function of the normal BCR gene product is not clear. The unregulated tyrosine kinase activity of BCR-ABL1 contributes to the immortality of leukaemic cells. The BCR protein has serine/threonine kinase activity and is a GTPase-activating protein for p21rac and other kinases. Two transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Jan 2020] | 22 | 23180509 | 23318037 | Human | 297 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 14191017 | BMP2 | bone morphogenetic protein 2 | ENCODES a protein that exhibits growth factor activity (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); aortic valve development (ortholog); atrioventricular valve morphogenesis (ortholog); PARTICIPATES I N Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH atrial heart septal defect 1 (ortholog); bone disease (ortholog); Bone Fractures (ortholog); FOUND IN extracellular space (ortholog); protein-containing complex (ortholog); vesicle (ortholog); INTERACTS WITH leptomycin B; warfarin; zearalenone | | | | Pig | 252 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 14029151 | BMP6 | bone morphogenetic protein 6 | ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell differentiation (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Acute Otitis Media (or tholog); adult T-cell leukemia/lymphoma (ortholog); allergic contact dermatitis (ortholog); FOUND IN extracellular space (ortholog); vesicle (ortholog) | | | | Pig | 95 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 619791 | Bub1b | BUB1 mitotic checkpoint serine/threonine kinase B | ENCODES a protein that exhibits ATP binding (inferred); kinase activity (inferred); nucleotide binding (inferred); INVOLVED IN metaphase/anaphase transition of mitotic cell cycle (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); protein localization to chromosome, centromeric reg ion (ortholog); PARTICIPATES IN cell cycle pathway, mitotic; mitotic spindle checkpoint pathway; ASSOCIATED WITH Aneuploidy (ortholog); cerebral palsy (ortholog); colon carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); kinetochore (ortholog); INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; 17beta-estradiol | 3 | 126017019 | 126069470 | Rat | 296 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 731272 | CALCR | calcitonin receptor | This gene encodes a high affinity receptor for the peptide hormone calcitonin and belongs to a subfamily of seven transmembrane-spanning G protein-coupled receptors. The encoded protein is involved in maintaining calcium homeostasis and in regulating osteoclast-mediated bone resorption. Polymorphism s in this gene have been associated with variations in bone mineral density and onset of osteoporosis. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Sep 2009] | 7 | 93424486 | 93574724 | Human | 141 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 12351932 | CCDC66 | coiled-coil domain containing 66 | ENCODES a protein that exhibits microtubule binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN retina homeostasis; ciliary transition zone assembly (ortholog); cilium assembly (ortholog); ASSOCIATED WITH retinal degeneration; retinitis pigmentosa (ortholog); FOUND IN photo receptor inner segment; axoneme (ortholog); centriolar satellite (ortholog) | 20 | 33714224 | 33758846 | Dog | 72 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 2291 | Ccnb1 | cyclin B1 | ENCODES a protein that exhibits protein kinase binding; protein-containing complex binding; cyclin-dependent protein serine/threonine kinase activator activity (ortholog); INVOLVED IN cellular response to fatty acid; cellular response to hypoxia; cellular response to iron(III) ion; PARTICIPATES IN c ell cycle pathway, mitotic; G1/S transition pathway; G2/M checkpoint pathway; ASSOCIATED WITH Experimental Diabetes Mellitus; Experimental Liver Neoplasms; Experimental Seizures; FOUND IN centrosome (ortholog); cyclin B1-CDK1 complex (ortholog); cytoplasm (ortholog); INTERACTS WITH (-)-citrinin; 1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane; 1,3-dichloropropan-2-ol | 2 | 33646252 | 33655225 | Rat | 858 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1352959 | CD40LG | CD40 ligand | The protein encoded by this gene is expressed on the surface of T cells. It regulates B cell function by engaging CD40 on the B cell surface. A defect in this gene results in an inability to undergo immunoglobulin class switch and is associated with hyper-IgM syndrome. [provided by RefSeq, Jul 2008] | X | 136648158 | 136660390 | Human | 520 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 2315 | Cd81 | Cd81 molecule | ENCODES a protein that exhibits cholesterol binding (ortholog); integrin binding (ortholog); MHC class II protein binding (ortholog); INVOLVED IN regulation of cell population proliferation; regulation of growth; CD4-positive, alpha-beta T cell costimulation (ortholog); PARTICIPATES IN B cell recept or signaling pathway; hepatitis C pathway; malaria pathway; ASSOCIATED WITH common variable immunodeficiency (ortholog); common variable immunodeficiency 6 (ortholog); hepatitis C (ortholog); FOUND IN apical plasma membrane; basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-di-tert-butyl-4-methylphenol | 1 | 207665274 | 207681094 | Rat | 237 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1558207 | Cdk17 | cyclin dependent kinase 17 | Predicted to enable cyclin-dependent protein serine/threonine kinase activity. Predicted to be involved in regulation of cell cycle phase transition. Predicted to be active in cytoplasm and nucleus. Is expressed in central nervous system; inner ear; and retina. Orthologous to human CDK17 (cyclin dep endent kinase 17). [provided by Alliance of Genome Resources, Jul 2025] | 10 | 92996492 | 93086956 | Mouse | 80 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1349023 | CLEC2D | C-type lectin domain family 2 member D | This gene encodes a member of the natural killer cell receptor C-type lectin family. The encoded protein inhibits osteoclast formation and contains a transmembrane domain near the N-terminus as well as the C-type lectin-like extracellular domain. Several alternatively spliced transcript variants hav e been identified for this gene. [provided by RefSeq, Oct 2010] | 12 | 9669713 | 9699553 | Human | 156 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 2311268 | COL6A4P1 | collagen type VI alpha 4 pseudogene 1 | This transcribed pseudogene represents the 5' end of a presumed ortholog to a mouse gene which encodes a collagen VI alpha 4 chain protein (GeneID 68553). No complete ORF of comparable size to the mouse protein is found in this gene. The predicted protein lacks a signal peptide; however, this trunca ted collagen polypeptide may have achieved a different function as suggested by PubMed ID: 18622395. Evidence of in vivo translation is incomplete. A large chromosome break separates this pseudogene from the 3' end of the presumed ortholog (COL6A4P2, GeneID 646300) which is located downstream at chromosome 3q21.3. [provided by RefSeq, Jun 2009] | 3 | 15165362 | 15205959 | Human | 19 | GenBank Nucleotide | gene, pseudo, PROVISIONAL [RefSeq] |
| 1566215 | Copg2 | coat protein complex I subunit gamma 2 | ENCODES a protein that exhibits structural molecule activity (inferred); INVOLVED IN intra-Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Weight Gain (ortholog); FOUND IN COPI vesicle coat (ortholog); COPI-coated vesicle (ortholog); Golgi membrane (ortholog); INTERACTS WITH 17beta-estr adiol; benzo[a]pyrene; bisphenol A | 4 | 60333455 | 60468953 | Rat | 95 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1565584 | Crebzf | CREB/ATF bZIP transcription factor | ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression, epigenetic (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (orth olog); RNA polymerase II transcription regulator complex (ortholog); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A | 1 | 153829544 | 153836073 | Rat | 99 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 2447 | Ctsh | cathepsin H | ENCODES a protein that exhibits aminopeptidase activity; identical protein binding; kininogen binding; INVOLVED IN cellular response to thyroid hormone stimulus; metanephros development; response to odorant; ASSOCIATED WITH Contusions; polycystic kidney disease; Sleep Deprivation; FOUND IN acrosomal vesicle; alveolar lamellar body; axoneme; INTERACTS WITH (+)-schisandrin B; 1,2,4-trimethylbenzene; 17alpha-ethynylestradiol | 8 | 99488756 | 99507639 | Rat | 321 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 14025790 | CTSS | cathepsin S | ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); INVOLVED IN bone resorption (ortholog); metanephros development (ortholog); positive regulation of cation channel activity (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); atherosclerosis (ortholog); carotid arte ry disease (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog) | | | | Pig | 68 | UniProt , GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 14159197 | CTSV | cathepsin V | ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); endopeptidase activity (ortholog); INVOLVED IN antigen processing and presentation of peptide antigen (ortholog); CD4-positive, alpha-beta T cell lineage commitment (ortholog); collagen catabolic process (ortholog); FOU ND IN chromaffin granule (ortholog); extracellular space (ortholog); lysosome (ortholog); INTERACTS WITH resveratrol | | | | Pig | 34 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1306597 | Cyc1 | cytochrome c-1 | ENCODES a protein that exhibits electron transfer activity (inferred); heme binding (inferred); metal ion binding (inferred); INVOLVED IN response to glucagon; PARTICIPATES IN Alzheimer's disease pathway; Huntington's disease pathway; oxidative phosphorylation pathway; ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 6 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog); INTERACTS WITH 17beta-estradiol; 2,2,2-tetramine; 2,3,7,8-tetrachlorodibenzodioxine | 7 | 109947750 | 109950142 | Rat | 147 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1319183 | CYLD | CYLD lysine 63 deubiquitinase | This gene is encodes a cytoplasmic protein with three cytoskeletal-associated protein-glycine-conserved (CAP-GLY) domains that functions as a deubiquitinating enzyme. Mutations in this gene have been associated with cylindromatosis, multiple familial trichoepithelioma, and Brooke-Spiegler syndrome. Alternate transcriptional splice variants, encoding different isoforms, have been characterized. [provided by RefSeq, Jul 2008] | 16 | 50742086 | 50801935 | Human | 312 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 621889 | Ddb1 | damage-specific DNA binding protein 1 | ENCODES a protein that exhibits damaged DNA binding; cullin family protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN biological process involved in interaction with symbiont (ortholog); cellular response to UV (ortholog); DNA damage response (ortholog); PARTICIPA TES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ubiquitin/proteasome degradation pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); communication disorder (ortholog); congenital heart disease (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); Cul4B-RING E3 ubiquitin ligase complex (ortholog); INTERACTS WITH 1,3-dinitrobenzene; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene | 1 | 216677810 | 216703605 | Rat | 179 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 13888800 | DDX3X | DEAD-box helicase 3 X-linked | ENCODES a protein that exhibits primary miRNA binding (ortholog); INVOLVED IN host-mediated suppression of viral genome replication; positive regulation of DNA-templated transcription; positive regulation of NLRP3 inflammasome complex assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog) ; breast cancer (ortholog); cerebellar hypoplasia (ortholog); FOUND IN cytoplasm; cytosol (ortholog); glutamatergic synapse (ortholog) | | | | Pig | 163 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1306989 | Dhrs7c | dehydrogenase/reductase 7C | ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN D-glucose import (ortholog); intracellular calcium ion homeostasis (ortholog); regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum (ortholog); FOUND IN longitud inal sarcoplasmic reticulum (ortholog); sarcoplasmic reticulum membrane (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; aconitine | 10 | 52994205 | 53012281 | Rat | 58 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 12070031 | DLA-DQB1 | major histocompatibility complex, class II, DQ beta 1 | ENCODES a protein that exhibits peptide antigen binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); antigen processing and presenta tion of peptide antigen (ortholog); ASSOCIATED WITH achalasia (ortholog); acute disseminated encephalomyelitis (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); external side of plasma membrane (ortholog) | 12 | 2305307 | 2307711 | Dog | 230 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 12222722 | DLA-DRB1 | MHC class II DLA DRB1 beta chain | ENCODES a protein that exhibits CD4 receptor binding (ortholog); polysaccharide binding (ortholog); T cell receptor binding (ortholog); INVOLVED IN antigen processing and presentation of endogenous peptide antigen via MHC class II (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); humoral immune response (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Actinic Prurigo (ortholog); acute disseminated encephalomyelitis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); immunological synapse (ortholog) | 12 | 2151409 | 2164564 | Dog | 265 | UniProt , GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 13998271 | DYNLL1 | dynein light chain LC8-type 1 | ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); nitric-oxide synthase inhibitor activity (ortholog); INVOLVED IN intraciliary retrograde transport (ortholog); mitocytosis (ortholog); motile cilium assembly (ortholog); PARTICIPATES IN mitochondria tran sport pathway; ASSOCIATED WITH brain ischemia (ortholog); cardiac arrest (ortholog); congestive heart failure (ortholog); FOUND IN axon cytoplasm (ortholog); cytoplasmic dynein complex (ortholog); cytosol (ortholog) | | | | Pig | 104 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 10518 | Elk1 | ELK1, member of ETS oncogene family | This gene is a member of the Ets family of transcription factors and of the ternary complex factor (TCF) subfamily. Proteins of the TCF subfamily form a ternary complex by binding to the the serum response factor and the serum response element in the promoter of the c-fos proto-oncogene. The protein encoded by this gene is a nuclear target for the ras-raf-MAPK signaling cascade. This gene may produce multiple isoforms by the use of alternative translational start codons. [provided by RefSeq, Mar 2012] | X | 20799634 | 20816847 | Mouse | 308 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1317144 | Elk3 | ELK3, member of ETS oncogene family | Enables DNA binding activity and DNA-binding transcription factor activity. Acts upstream of or within angiogenesis; regulation of DNA-templated transcription; and wound healing. Located in nucleus. Is expressed in several structures, including alimentary system; brain; embryo mesenchyme; genitourin ary system; and heart. Used to study congenital chylothorax. Orthologous to human ELK3 (ETS transcription factor ELK3). [provided by Alliance of Genome Resources, Jul 2025] | 10 | 93083277 | 93147021 | Mouse | 192 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1321445 | Elk4 | ELK4, member of ETS oncogene family | Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and chromatin binding activity. Predicted to be involved in cell differentiation; negative regulation of transcription by RNA polymerase II; and positive regulation of transcription by RNA polymerase II. Predicted to be located in cytosol and nucleoplasm. Predicted to be active in nucleus. Is expressed in several structures, including central nervous system; genitourinary system; hemolymphoid system; and retina. Orthologous to human ELK4 (ETS transcription factor ELK4). [provided by Alliance of Genome Resources, Jul 2025] | 1 | 131935129 | 131954186 | Mouse | 175 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1343567 | F8 | coagulation factor VIII | This gene encodes coagulation factor VIII, which participates in the intrinsic pathway of blood coagulation; factor VIII is a cofactor for factor IXa which, in the presence of Ca+2 and phospholipids, converts factor X to the activated form Xa. This gene produces two alternatively spliced transcript s. Transcript variant 1 encodes a large glycoprotein, isoform a, which circulates in plasma and associates with von Willebrand factor in a noncovalent complex. This protein undergoes multiple cleavage events. Transcript variant 2 encodes a putative small protein, isoform b, which consists primarily of the phospholipid binding domain of factor VIIIc. This binding domain is essential for coagulant activity. Defects in this gene results in hemophilia A, a common recessive X-linked coagulation disorder. [provided by RefSeq, Jul 2008] | X | 154835792 | 155022723 | Human | 799 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1306643 | Fam120a | family with sequence similarity 120 member A | FOUND IN cytosol (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4,4'-sulfonyldiphenol; acetamide | 17 | 15890151 | 15981337 | Rat | 80 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1354370 | FCER2 | Fc epsilon receptor II | The protein encoded by this gene is a B-cell specific antigen, and a low-affinity receptor for IgE. It has essential roles in B cell growth and differentiation, and the regulation of IgE production. This protein also exists as a soluble secreted form, then functioning as a potent mitogenic growth fa ctor. Alternatively spliced transcript variants encoding different isoforms have been described for this gene.[provided by RefSeq, Jul 2011] | 19 | 7688776 | 7702131 | Human | 100 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1303096 | Fut8 | fucosyltransferase 8 | ENCODES a protein that exhibits alpha-(1->6)-fucosyltransferase activity (ortholog); glycoprotein 6-alpha-L-fucosyltransferase activity (ortholog); glycosyltransferase activity (ortholog); INVOLVED IN cell migration (ortholog); GDP-L-fucose metabolic process (ortholog); integrin-mediated signaling p athway (ortholog); PARTICIPATES IN keratan sulfate biosynthetic pathway; N-linked glycan biosynthetic pathway; ASSOCIATED WITH Congenital Disorder of Glycosylation with Defective Fucosylation 1 (ortholog); genetic disease (ortholog); pulmonary emphysema (ortholog); FOUND IN Golgi cisterna membrane (inferred); membrane (inferred); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene | 6 | 101682354 | 101909784 | Rat | 168 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1321916 | Gabpa | GA repeat binding protein, alpha | Enables RNA polymerase II cis-regulatory region sequence-specific DNA binding activity and chromatin binding activity. Acts upstream of or within blastocyst formation; negative regulation of megakaryocyte differentiation; and negative regulation of transcription by RNA polymerase II. Located in nucl eus. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; integumental system; and sensory organ. Orthologous to human GABPA (GA binding protein transcription factor subunit alpha). [provided by Alliance of Genome Resources, Jul 2025] | 16 | 84631795 | 84660671 | Mouse | 158 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1316989 | Gkn3 | gastrokine 3 | Acts upstream of or within negative regulation of epithelial cell proliferation. Located in extracellular space. Is expressed in lung vascular element. Orthologous to human GKN3P (gastrokine 3, pseudogene). [provided by Alliance of Genome Resources, Jul 2025] | 6 | 87360301 | 87365917 | Mouse | 26 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 620282 | Golga2 | golgin A2 | ENCODES a protein that exhibits importin-alpha family protein binding; protein kinase binding; protein-containing complex binding; INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport; Golgi disassembly; mitotic spindle assembly; ASSOCIATED WITH Developmental Delay with Hypotonia, M yopathy, and Brain Abnormalities (ortholog); neuromuscular disease (ortholog); FOUND IN cis-Golgi network; Golgi apparatus; Golgi cis cisterna; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene | 3 | 35981783 | 36002023 | Rat | 162 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 13986808 | GOLM1 | golgi membrane protein 1 | INVOLVED IN nucleus organization (ortholog); regulation of lipid metabolic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); COVID-19 (ortholog); hepatitis (ortholog); FOUND IN Golgi apparatus (inferred); membrane (inferred) | | | | Pig | 21 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 2721 | Got1 | glutamic-oxaloacetic transaminase 1 | ENCODES a protein that exhibits carboxylic acid binding; L-aspartate:2-oxoglutarate aminotransferase activity; L-cysteine transaminase activity; INVOLVED IN aspartate metabolic process; cellular response to mechanical stimulus; dicarboxylic acid metabolic process; PARTICIPATES IN gluconeogenesis pat hway; AGAT deficiency pathway; alkaptonuria pathway; ASSOCIATED WITH Acute Lung Injury; cardiomyopathy; Febrile Seizures; FOUND IN axon terminus; cytoplasm (ortholog); cytosol (ortholog); INTERACTS WITH (+)-taxifolin; (2E,4E)-hexa-2,4-dienoic acid; (E)-thiamethoxam | 1 | 252306541 | 252337622 | Rat | 616 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 2787 | Hcrtr1 | hypocretin receptor 1 | ENCODES a protein that exhibits orexin receptor activity; peptide hormone binding; INVOLVED IN feeding behavior; G protein-coupled receptor signaling pathway; neuropeptide signaling pathway; PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; orexin/hypocretin signaling pathway via orexin/hypocretin receptor 1; orexin/hypocretin signaling pathway; ASSOCIATED WITH Cocaine-Related Disorders (ortholog); withdrawal disorder (ortholog); FOUND IN plasma membrane (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; ammonium chloride | 5 | 147761392 | 147771846 | Rat | 103 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 731397 | Hdgfl2 | HDGF like 2 | Predicted to enable histone H3K27me3 reader activity; histone H3K9me2/3 reader activity; and methylated histone binding activity. Involved in muscle cell differentiation and skeletal muscle tissue regeneration. Located in nucleus. Is expressed in brain; dorsal root ganglion; intestine; and retina. O rthologous to human HDGFL2 (HDGF like 2). [provided by Alliance of Genome Resources, Apr 2025] | 17 | 56386661 | 56407605 | Mouse | 108 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1343149 | HLA-C | major histocompatibility complex, class I, C | HLA-C belongs to the HLA class I heavy chain paralogues. This class I molecule is a heterodimer consisting of a heavy chain and a light chain (beta-2 microglobulin). The heavy chain is anchored in the membrane. Class I molecules play a central role in the immune system by presenting peptides derived from endoplasmic reticulum lumen. They are expressed in nearly all cells. The heavy chain is approximately 45 kDa and its gene contains 8 exons. Exon one encodes the leader peptide, exons 2 and 3 encode the alpha1 and alpha2 domain, which both bind the peptide, exon 4 encodes the alpha3 domain, exon 5 encodes the transmembrane region, and exons 6 and 7 encode the cytoplasmic tail. Polymorphisms within exon 2 and exon 3 are responsible for the peptide binding specificity of each class one molecule. Typing for these polymorphisms is routinely done for bone marrow and kidney transplantation. About 6000 HLA-C alleles have been described. The HLA system plays an important role in the occurrence and outcome of infectious diseases, including those caused by the malaria parasite, the human immunodeficiency virus (HIV), and the severe acute respiratory syndrome coronavirus (SARS-CoV). The structural spike and the nucleocapsid proteins of the novel coronavirus SARS-CoV-2, which causes coronavirus disease 2019 (COVID-19), are reported to contain multiple Class I epitopes with predicted HLA restrictions. Individual HLA genetic variation may help explain different immune responses to a virus across a population.[provided by RefSeq, Aug 2020] | 6 | 31268749 | 31272092 | Human | 173 | UniProt , GenBank Protein , GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1351810 | HLA-DQA1 | major histocompatibility complex, class II, DQ alpha 1 | HLA-DQA1 belongs to the HLA class II alpha chain paralogues. The class II molecule is a heterodimer consisting of an alpha (DQA) and a beta chain (DQB), both anchored in the membrane. It plays a central role in the immune system by presenting peptides derived from extracellular proteins. Class II mo lecules are expressed in antigen presenting cells (APC: B Lymphocytes, dendritic cells, macrophages). The alpha chain is approximately 33-35 kDa. It is encoded by 5 exons; exon 1 encodes the leader peptide, exons 2 and 3 encode the two extracellular domains, and exon 4 encodes the transmembrane domain and the cytoplasmic tail. Within the DQ molecule both the alpha chain and the beta chain contain the polymorphisms specifying the peptide binding specificities, resulting in up to four different molecules. Typing for these polymorphisms is routinely done for bone marrow transplantation. [provided by RefSeq, Jul 2008] | 6 | 32637406 | 32655272 | Human | 464 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1353906 | HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1 | HLA-DQB1 belongs to the HLA class II beta chain paralogs. This class II molecule is a heterodimer consisting of an alpha (DQA) and a beta chain (DQB), both anchored in the membrane. It plays a central role in the immune system by presenting peptides derived from extracellular proteins. Class II mole cules are expressed in antigen presenting cells (APC: B lymphocytes, dendritic cells, macrophages). The beta chain is approximately 26-28 kDa and it contains six exons. Exon 1 encodes the leader peptide, exons 2 and 3 encode the two extracellular domains, exon 4 encodes the transmembrane domain and exon 5 encodes the cytoplasmic tail. Within the DQ molecule both the alpha chain and the beta chain contain the polymorphisms specifying the peptide binding specificities, resulting in up to four different molecules. Typing for these polymorphisms is routinely done for bone marrow transplantation. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2011] | 6 | 32659467 | 32666657 | Human | 709 | UniProt , GenBank Protein , GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1343169 | HLA-DRB3 | major histocompatibility complex, class II, DR beta 3 | HLA-DRB3 belongs to the HLA class II beta chain paralogues. This class II molecule is a heterodimer consisting of an alpha (DRA) and a beta (DRB) chain, both anchored in the membrane. It plays a central role in the immune system by presenting peptides derived from extracellular proteins. Class II mo lecules are expressed in antigen presenting cells. The beta chain is approximately 26-28 kDa and its gene contains 6 exons. Exon one encodes the leader peptide, exons 2 and 3 encode the two extracellular domains, exon 4 encodes the transmembrane domain and exon 5 encodes the cytoplasmic tail. Within the DR molecule the beta chain contains all the polymorphisms specifying the peptide binding specificities. Typing for these polymorphisms is routinely done for bone marrow and kidney transplantation. There are multiple pseudogenes of this gene. [provided by RefSeq, Feb 2020] | | | | Human | 79 | UniProt , GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1345500 | HLA-DRB4 | major histocompatibility complex, class II, DR beta 4 | HLA-DRB4 belongs to the HLA class II beta chain paralogues. This class II molecule is a heterodimer consisting of an alpha (DRA) and a beta (DRB) chain, both anchored in the membrane. It plays a central role in the immune system by presenting peptides derived from extracellular proteins. Class II mo lecules are expressed in antigen presenting cells. The beta chain is approximately 26-28 kDa and its gene contains 6 exons. Exon one encodes the leader peptide, exons 2 and 3 encode the two extracellular domains, exon 4 encodes the transmembrane domain and exon 5 encodes the cytoplasmic tail. Within the DR molecule the beta chain contains all the polymorphisms specifying the peptide binding specificities. Typing for these polymorphisms is routinely done for bone marrow and kidney transplantation. There are multiple pseudogenes of this gene. [provided by RefSeq, Feb 2020] | | | | Human | 75 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1350012 | HLA-DRB5 | major histocompatibility complex, class II, DR beta 5 | HLA-DRB5 belongs to the HLA class II beta chain paralogues. This class II molecule is a heterodimer consisting of an alpha (DRA) and a beta (DRB) chain, both anchored in the membrane. It plays a central role in the immune system by presenting peptides derived from extracellular proteins. Class II mo lecules are expressed in antigen presenting cells. The beta chain is approximately 26-28 kDa and its gene contains 6 exons. Exon one encodes the leader peptide, exons 2 and 3 encode the two extracellular domains, exon 4 encodes the transmembrane domain and exon 5 encodes the cytoplasmic tail. Within the DR molecule the beta chain contains all the polymorphisms specifying the peptide binding specificities. Typing for these polymorphisms is routinely done for bone marrow and kidney transplantation. There are multiple pseudogenes of this gene. [provided by RefSeq, Feb 2020] | 6 | 32517353 | 32530287 | Human | 84 | UniProt , GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1345710 | HLA-DRB9 | major histocompatibility complex, class II, DR beta 9 (pseudogene) | Predicted to be involved in antigen processing and presentation and immune response. Predicted to be located in membrane. Predicted to be part of MHC class II protein complex. [provided by Alliance of Genome Resources, Jul 2025] | 6 | 32459820 | 32460089 | Human | 4 | GenBank Nucleotide | gene, pseudo, INFERRED [RefSeq] |
| 2837 | Hsd17b7 | hydroxysteroid (17-beta) dehydrogenase 7 | ENCODES a protein that exhibits estradiol 17-beta-dehydrogenase [NAD(P)+] activity; prolactin receptor binding; 3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity (ortholog); INVOLVED IN estrogen biosynthetic process; hippocampus development; maternal process involved in female pregnancy; PARTIC IPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH polycystic ovary syndrome; FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog); INTERACTS WITH 1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane; 1-naphthyl isothiocyanate; 17beta-estradiol | 13 | 84702875 | 84722810 | Rat | 292 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 13929843 | ID2 | inhibitor of DNA binding 2 | ENCODES a protein that exhibits protein dimerization activity (inferred); RNA polymerase II-specific DNA-binding transcription factor binding (inferred); transcription regulator inhibitor activity (inferred); INVOLVED IN adipose tissue development (ortholog); adult locomotory behavior (ortholog); bu ndle of His development (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); protein-containing complex (ortholog); INTERACTS WITH deoxynivalenol; graphene oxide; ochratoxin A | | | | Pig | 137 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 14085989 | ID4 | inhibitor of DNA binding 4 | ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN brain development (ortholog); central nervous system myelination (ortholog); cerebral cortex neuron differentiation (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (orthol og); carcinoma (ortholog); cholestasis (ortholog); FOUND IN cytoplasm (inferred); nucleoplasm (inferred); nucleus (inferred); INTERACTS WITH deoxynivalenol | | | | Pig | 52 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1319842 | INTS6 | integrator complex subunit 6 | DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. The protein encoded by this gene is a DEAD box protein that is part of a complex that interacts with the C-terminus of RNA polymerase II and is involved in 3' end processing of snRNAs. In addi tion, this gene is a candidate tumor suppressor and is located in the critical region of loss of heterozygosity (LOH). Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Apr 2015] | 13 | 51334405 | 51453036 | Human | 120 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 14199402 | IRS4 | insulin receptor substrate 4 | ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN insulin receptor signaling pathway (inferred); signal transduction (inferred); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); colorectal cancer (ortholog); congenital nongoitrous hypothyroidism 9 (ortholog); FOUND IN protein-containing complex (ortholog) | | | | Pig | 28 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 1563216 | Isca2 | iron-sulfur cluster assembly 2 | ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN protein maturation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); multiple mitochondrial dys functions syndrome (ortholog); FOUND IN iron-sulfur cluster assembly complex (ortholog); mitochondrial [4Fe-4S] assembly complex (ortholog); mitochondrion (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; 2,6-dinitrotoluene; 6-propyl-2-thiouracil | 6 | 110149593 | 110151103 | Rat | 72 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1563945 | Jade3 | jade family PHD finger 3 | ENCODES a protein that exhibits metal ion binding (inferred); zinc ion binding (inferred); INVOLVED IN regulation of cell cycle (ortholog); regulation of DNA biosynthetic process (ortholog); regulation of DNA replication (ortholog); FOUND IN histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); INTERACTS WITH 6-propyl-2-thiouracil; bisphenol A; Cuprizon | X | 4222369 | 4424164 | Rat | 63 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1316929 | KEL | Kell metallo-endopeptidase (Kell blood group) | This gene encodes a type II transmembrane glycoprotein that is the highly polymorphic Kell blood group antigen. The Kell glycoprotein links via a single disulfide bond to the XK membrane protein that carries the Kx antigen. The encoded protein contains sequence and structural similarity to members o f the neprilysin (M13) family of zinc endopeptidases. [provided by RefSeq, Jul 2008] | 7 | 142941114 | 142962363 | Human | 81 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 620239 | Kif2c | kinesin family member 2C | ENCODES a protein that exhibits microtubule plus-end binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); establishment or maintenance of microtubule cytoskeleton polarity (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH colorect al cancer (ortholog); contact dermatitis (ortholog); COVID-19 (ortholog); FOUND IN chromosome, centromeric region (ortholog); cytoplasmic microtubule (ortholog); glutamatergic synapse (ortholog); INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; 17beta-estradiol | 5 | 135873925 | 135899267 | Rat | 253 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1351159 | KIR2DL3 | killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 3 | Killer cell immunoglobulin-like receptors (KIRs) are transmembrane glycoproteins expressed by natural killer cells and subsets of T cells. The KIR genes are polymorphic and highly homologous and they are found in a cluster on chromosome 19q13.4 within the 1 Mb leukocyte receptor complex (LRC). The g ene content of the KIR gene cluster varies among haplotypes, although several "framework" genes are found in all haplotypes (KIR3DL3, KIR3DP1, KIR3DL4, KIR3DL2). The KIR proteins are classified by the number of extracellular immunoglobulin domains (2D or 3D) and by whether they have a long (L) or short (S) cytoplasmic domain. KIR proteins with the long cytoplasmic domain transduce inhibitory signals upon ligand binding via an immune tyrosine-based inhibitory motif (ITIM), while KIR proteins with the short cytoplasmic domain lack the ITIM motif and instead associate with the TYRO protein tyrosine kinase binding protein to transduce activating signals. The ligands for several KIR proteins are subsets of HLA class I molecules; thus, KIR proteins are thought to play an important role in regulation of the immune response. [provided by RefSeq, Jul 2008] | 19 | 54738513 | 54753052 | Human | 35 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 62389 | Klf6 | KLF transcription factor 6 | ENCODES a protein that exhibits DNA-binding transcription factor activity; double-stranded DNA binding; DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to endothelin; cellular response to hydrogen peroxide; positive regulation of tra nscription by RNA polymerase II; ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); Hypotension (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog); INTERACTS WITH 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene | 17 | 69449483 | 69458478 | Rat | 314 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1342944 | LAT | linker for activation of T cells | The protein encoded by this gene is phosphorylated by ZAP-70/Syk protein tyrosine kinases following activation of the T-cell antigen receptor (TCR) signal transduction pathway. This transmembrane protein localizes to lipid rafts and acts as a docking site for SH2 domain-containing proteins. Upon pho sphorylation, this protein recruits multiple adaptor proteins and downstream signaling molecules into multimolecular signaling complexes located near the site of TCR engagement. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008] | 16 | 28984803 | 28990784 | Human | 179 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1564085 | Lats1 | large tumor suppressor kinase 1 | ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN regulation of postsynaptic density assembly; G2/M transition of mitotic cell cycle (ortholog); hippo signaling (ortholog); ASSOCIATED WITH basal cell ca rcinoma (ortholog); Ependymomas (ortholog); Glandular and Epithelial Neoplasms (ortholog); FOUND IN glutamatergic synapse; postsynapse; cytoplasm (ortholog); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A | 1 | 3980801 | 4014029 | Rat | 176 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 732713 | LCP2 | lymphocyte cytosolic protein 2 | This gene encodes an adapter protein that acts as a substrate of the T cell antigen receptor (TCR)-activated protein tyrosine kinase pathway. The encoded protein associates with growth factor receptor bound protein 2, and is thought to play a role TCR-mediated intracellular signal transduction. A si milar protein in mouse plays a role in normal T-cell development and activation. Mice lacking this gene show subcutaneous and intraperitoneal fetal hemorrhaging, dysfunctional platelets and impaired viability. [provided by RefSeq, Nov 2016] | 5 | 170246233 | 170297777 | Human | 145 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1564875 | Ldb3 | LIM domain binding 3 | ENCODES a protein that exhibits enzyme binding; cytoskeletal protein binding (ortholog); muscle alpha-actinin binding (ortholog); INVOLVED IN sarcomere organization (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy ( ortholog); cardiomyopathy (ortholog); congenital myopathy (ortholog); FOUND IN Z disc; cytoskeleton (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; alpha-Zearalanol | 16 | 9862161 | 9926338 | Rat | 157 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 69123 | LEP | leptin | This gene encodes a protein that is secreted by white adipocytes into the circulation and plays a major role in the regulation of energy homeostasis. Circulating leptin binds to the leptin receptor in the brain, which activates downstream signaling pathways that inhibit feeding and promote energy ex penditure. This protein also has several endocrine functions, and is involved in the regulation of immune and inflammatory responses, hematopoiesis, angiogenesis, reproduction, bone formation and wound healing. Mutations in this gene and its regulatory regions cause severe obesity and morbid obesity with hypogonadism in human patients. A mutation in this gene has also been linked to type 2 diabetes mellitus development. [provided by RefSeq, Aug 2017] | 7 | 128241278 | 128257629 | Human | 1060 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 14109415 | LEPR | leptin receptor | ENCODES a protein that exhibits identical protein binding (ortholog); leptin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN angiogenesis (ortholog); bone growth (ortholog); cellular response to acetate (ortholog); PARTICIPATES IN altered energy homeostasis pathway; alt ered leptin system pathway; energy homeostasis pathway; ASSOCIATED WITH Albuminuria (ortholog); Animal Disease Models (ortholog); arteriosclerosis (ortholog); FOUND IN extracellular space (ortholog); INTERACTS WITH bifenthrin; etoxazole | | | | Pig | 227 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1605118 | LGR5 | leucine rich repeat containing G protein-coupled receptor 5 | The protein encoded by this gene is a leucine-rich repeat-containing receptor (LGR) and member of the G protein-coupled, 7-transmembrane receptor (GPCR) superfamily. The encoded protein is a receptor for R-spondins and is involved in the canonical Wnt signaling pathway. This protein plays a role in the formation and maintenance of adult intestinal stem cells during postembryonic development. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2015] | 12 | 71439129 | 71586310 | Human | 173 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 14115808 | LMX1A | LIM homeobox transcription factor 1 alpha | ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription activator activity, RNA polymerase II-specific (inferred); DNA-binding transcription factor activity, RNA polymerase II-specific (inferred); INVOLVED IN axon guidance (ortholog); central nervous system development (ort holog); central nervous system neuron differentiation (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 7 (ortholog); Hearing Loss (ortholog); schizophrenia (ortholog); FOUND IN nucleus (inferred) | | | | Pig | 43 | description , GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 14039051 | LOC100624149 | eukaryotic translation initiation factor 2 subunit 3 | ENCODES a protein that exhibits GTP binding (inferred); GTPase activity (inferred); hydrolase activity (inferred); INVOLVED IN translation (inferred); translational initiation (inferred) | | | | Pig | 13 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 14069631 | LOC100624329 | zinc finger X-chromosomal protein | ENCODES a protein that exhibits DNA binding (inferred); metal ion binding (inferred); zinc ion binding (inferred); INVOLVED IN regulation of DNA-templated transcription (inferred); FOUND IN nucleus (inferred) | | | | Pig | 14 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 14017246 | LOC100624590 | ATP-dependent RNA helicase DDX3X | ENCODES a protein that exhibits ATP binding (inferred); helicase activity (inferred); hydrolase activity (inferred); ASSOCIATED WITH spermatogenic failure 3 (ortholog); Y-linked spermatogenic failure 2 (ortholog); FOUND IN cytosol (ortholog) | | | | Pig | 19 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 6502346 | LOC100909675 | uncharacterized LOC100909675 | | 4 | 12179988 | 12184203 | Rat | | GenBank Nucleotide | gene, ncrna, VALIDATED [RefSeq] |
| 6496734 | LOC100910802 | uncharacterized LOC100910802 | | 12 | 25379031 | 25394160 | Rat | | GenBank Nucleotide | gene, ncrna, VALIDATED [RefSeq] |
| 13908891 | LOC110257910 | ubiquitin-like modifier-activating enzyme 1 | ENCODES a protein that exhibits ATP binding (inferred); ligase activity (inferred); nucleotide binding (inferred); INVOLVED IN protein ubiquitination (inferred) | | | | Pig | 13 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 13883980 | LOC396706 | U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 | | | | | Pig | | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 3072 | Mdh1 | malate dehydrogenase 1 | ENCODES a protein that exhibits L-malate dehydrogenase (NAD+) activity; malate dehydrogenase activity; NAD binding; INVOLVED IN malate metabolic process; NAD+ metabolic process; oxaloacetate metabolic process; PARTICIPATES IN Leigh disease pathway; nicotinamide adenine dinucleotide metabolic pathway ; primary hyperoxaluria type 2 pathway; ASSOCIATED WITH Liver Injury; Acute Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); INTERACTS WITH 1-benzylpiperazine; 1-naphthyl isothiocyanate; 17beta-estradiol | 14 | 99831934 | 99847227 | Rat | 257 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1350145 | MED12 | mediator complex subunit 12 | The initiation of transcription is controlled in part by a large protein assembly known as the preinitiation complex. A component of this preinitiation complex is a 1.2 MDa protein aggregate called Mediator. This Mediator component binds with a CDK8 subcomplex which contains the protein encoded by t his gene, mediator complex subunit 12 (MED12), along with MED13, CDK8 kinase, and cyclin C. The CDK8 subcomplex modulates Mediator-polymerase II interactions and thereby regulates transcription initiation and reinitation rates. The MED12 protein is essential for activating CDK8 kinase. Defects in this gene cause X-linked Opitz-Kaveggia syndrome, also known as FG syndrome, and Lujan-Fryns syndrome. [provided by RefSeq, Aug 2009] | X | 71118596 | 71142450 | Human | 668 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1306415 | Med20 | mediator complex subunit 20 | ENCODES a protein that exhibits ubiquitin protein ligase activity; INVOLVED IN protein ubiquitination; skeletal muscle cell differentiation (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN ubiquitin ligase complex; core mediator complex (ortholog); mediator complex (orth olog); INTERACTS WITH 2,4-dinitrotoluene; 6-propyl-2-thiouracil; bisphenol A | 9 | 20867681 | 20880288 | Rat | 77 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 13953189 | MEF2A | myocyte enhancer factor 2A | ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular respo nse to glucose stimulus (ortholog); dendrite morphogenesis (ortholog); ASSOCIATED WITH Coronary Artery Disease, Autosomal Dominant 1 (ortholog); dilated cardiomyopathy (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN nucleus (ortholog) | | | | Pig | 84 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 14084900 | MEF2B | myocyte enhancer factor 2B | ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription activator activity, RNA polymerase II-specific (inferred); histone deacetylase binding (inferred); INVOLVED IN cell differentiation (inferred); positive regulation of DNA-templated transcription (inferred); positive re gulation of transcription by RNA polymerase II (inferred); FOUND IN nucleus (inferred); transcription regulator complex (inferred) | | | | Pig | 23 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 13913171 | MEF2C | myocyte enhancer factor 2C | ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN AMPA selective glutamate receptor signaling pathway (ortholog); axon guidance (ortholog); B cell homeostasis (ortholog); ASSOCIATED WITH a utism spectrum disorder (ortholog); autistic disorder (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) | | | | Pig | 240 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 14117261 | MEF2D | myocyte enhancer factor 2D | ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); enzyme binding (ortholog); INVOLVED IN chondrocyte differentiation (ortholog); endochondral ossification (ortholog); osteoblast d ifferentiation (ortholog); ASSOCIATED WITH lung cancer (ortholog); migraine without aura (ortholog); FOUND IN cytoplasm (ortholog) | | | | Pig | 46 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 1310230 | Mff | mitochondrial fission factor | ENCODES a protein that exhibits GTPase binding; protein-containing complex binding; identical protein binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide; positive regulation of cardiac muscle cell apoptotic process; positive regulation of mitochondrial fission; PARTICIPATES IN mi tochondria fission pathway; ASSOCIATED WITH transient cerebral ischemia; encephalopathy due to defective mitochondrial and peroxisomal fission 2 (ortholog); genetic disease (ortholog); FOUND IN mitochondrial membrane; synaptic vesicle; synaptic vesicle membrane; INTERACTS WITH atrazine; benzo[a]pyrene; bisphenol A | 9 | 91455931 | 91484171 | Rat | 179 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1614965 | Mfsd4a | major facilitator superfamily domain containing 4A | Predicted to enable transmembrane transporter activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Orthologous to human MFSD4A (major facilitator superfamily domain containing 4A). [provided by Alliance of Genome Resources, Jul 2025] | 1 | 131947543 | 131997400 | Mouse | 77 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 621680 | Mipep | mitochondrial intermediate peptidase | ENCODES a protein that exhibits endopeptidase activity; INVOLVED IN proteolysis (inferred); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH cardiomyopathy (ortholog); combined oxidative phosphorylation deficiency 31 (ortholog); genetic disease (ortholog); FOUND I N mitochondrial matrix; mitochondrion (ortholog); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine | 15 | 39102301 | 39227915 | Rat | 119 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 620400 | Mlxipl | MLX interacting protein-like | ENCODES a protein that exhibits DNA binding; DNA-binding transcription factor activity; protein kinase binding; INVOLVED IN cellular response to glucose stimulus; energy homeostasis; fatty acid homeostasis; PARTICIPATES IN glycolysis/gluconeogenesis pathway; ASSOCIATED WITH end stage renal disease; Hypertriglyceridemia; Insulin Resistance; FOUND IN cytosol; nucleus; chromatin (ortholog); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine | 12 | 27178158 | 27213675 | Rat | 309 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 3140 | Myh9 | myosin, heavy chain 9 | ENCODES a protein that exhibits follicle-stimulating hormone receptor binding; G-protein alpha-subunit binding; identical protein binding; INVOLVED IN actin filament bundle assembly; actin filament bundle distribution; cell-cell adhesion; PARTICIPATES IN follicle-stimulating hormone signaling pathwa y; myocarditis pathway; ASSOCIATED WITH Carotid Artery Injuries; metabolic acidosis; AIDS-Associated Nephropathy (ortholog); FOUND IN actin filament; apical plasma membrane; brush border; INTERACTS WITH (+)-schisandrin B; 1-naphthyl isothiocyanate; 17beta-estradiol 3-benzoate | 7 | 111224291 | 111304963 | Rat | 450 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 13953722 | NAMPT | nicotinamide phosphoribosyltransferase | ENCODES a protein that exhibits cytokine activity (ortholog); heterocyclic compound binding (ortholog); identical protein binding (ortholog); INVOLVED IN adipose tissue development (ortholog); cellular response to amyloid-beta (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN niac in metabolic pathway; nicotinamide adenine dinucleotide biosynthesis, the salvage pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); carotid artery disease (ortholog); colitis (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); extracellular region (inferred); INTERACTS WITH deoxynivalenol | | | | Pig | 94 | UniProt , GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1561931 | Nexmif | neurite extension and migration factor | INVOLVED IN negative regulation of cell adhesion mediated by integrin; negative regulation of cell-cell adhesion mediated by cadherin; negative regulation of cell-matrix adhesion; ASSOCIATED WITH autism spectrum disorder (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN nucleopla sm (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acrylamide | X | 73153786 | 73284943 | Rat | 73 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 14057707 | NFATC1 | nuclear factor of activated T cells 1 | ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN aortic valve development (ortholog); aortic valve morphogenesis (ortholog); B-1a B cell differentiation (ortholog); ASSOCIATED WITH aortic valve stenosis (ortholog); congenital heart disease (ortholog); Diabetic Nephropathies (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog); INTERACTS WITH deoxynivalenol | | | | Pig | 103 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 14085975 | NFKBIA | NFKB inhibitor alpha | ENCODES a protein that exhibits heat shock protein binding (ortholog); NF-kappaB binding (ortholog); nuclear localization sequence binding (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); lipopolysaccharide-mediated sig naling pathway (ortholog); PARTICIPATES IN adenosine signaling pathway; ceramide signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); Adenoviridae Infections (ortholog); alcoholic hepatitis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog); INTERACTS WITH cadmium atom; cadmium dichloride; carbon monoxide | | | | Pig | 180 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1314945 | NOD2 | nucleotide binding oligomerization domain containing 2 | This gene is a member of the Nod1/Apaf-1 family and encodes a protein with two caspase recruitment (CARD) domains and six leucine-rich repeats (LRRs). The protein is primarily expressed in the peripheral blood leukocytes. It plays a role in the immune response to intracellular bacterial lipopolysacc harides (LPS) by recognizing the muramyl dipeptide (MDP) derived from them and activating the NFKB protein. Mutations in this gene have been associated with Crohn disease and Blau syndrome. Alternatively spliced transcript variants encoding distinct isoforms have been found for this gene. [provided by RefSeq, Jun 2014] | 16 | 50693606 | 50733075 | Human | 658 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1353367 | NUP35 | nucleoporin 35 | This gene encodes a member of the nucleoporin family. The encoded protein contains two membrane binding regions, is localized to the nuclear rim, and is part of the nuclear pore complex. All molecules entering or leaving the nucleus either diffuse through or are actively transported by the nuclear p ore complex. Alternative splicing results in multiple transcript variants. Pseudogenes of this gene have been defined on chromosomes 7 and 10. [provided by RefSeq, Dec 2013] | 2 | 183117514 | 183161680 | Human | 105 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 14021365 | OCLN | occludin | ENCODES a protein that exhibits protein domain specific binding (inferred); INVOLVED IN cell-cell junction organization (ortholog); cellular response to tumor necrosis factor (ortholog); epithelial cell migration (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pa thway; ASSOCIATED WITH acute kidney failure (ortholog); allergic rhinitis (ortholog); Breast Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); cell leading edge (ortholog); cell surface (ortholog); INTERACTS WITH (S)-nicotine; 3-acetyldeoxynivalenol; 4-phenylbutyric acid | | | | Pig | 116 | UniProt , GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 736990 | OXR1 | oxidation resistance 1 | Predicted to enable oxidoreductase activity. Predicted to be involved in response to oxidative stress. Predicted to act upstream of or within several processes, including adult walking behavior; negative regulation of cellular response to oxidative stress; and negative regulation of peptidyl-cystein e S-nitrosylation. Located in mitochondrion. Implicated in cerebellar hyplasia/atrophy, epilepsy, and global developmental delay. [provided by Alliance of Genome Resources, Apr 2025] | 8 | 106270178 | 106752694 | Human | 157 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1308213 | Pbx1 | PBX homeobox 1 | ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adrenal gland development (ortholog); animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); ASSOCIATED WITH brain infarction; glaucoma; autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol | 13 | 82811664 | 83121447 | Rat | 245 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 3276 | Pctp | phosphatidylcholine transfer protein | ENCODES a protein that exhibits phosphatidylcholine binding (ortholog); phosphatidylcholine transporter activity (ortholog); INVOLVED IN cholesterol metabolic process (ortholog); negative regulation of cold-induced thermogenesis (ortholog); phospholipid transport (ortholog); FOUND IN cytosol (orthol og); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol | 10 | 75305999 | 75351919 | Rat | 169 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 730916 | PDGFRA | platelet derived growth factor receptor alpha | This gene encodes a cell surface tyrosine kinase receptor for members of the platelet-derived growth factor family. These growth factors are mitogens for cells of mesenchymal origin. The identity of the growth factor bound to a receptor monomer determines whether the functional receptor is a homodim er or a heterodimer, composed of both platelet-derived growth factor receptor alpha and beta polypeptides. Studies suggest that this gene plays a role in organ development, wound healing, and tumor progression. Mutations in this gene have been associated with idiopathic hypereosinophilic syndrome, somatic and familial gastrointestinal stromal tumors, and a variety of other cancers. [provided by RefSeq, Mar 2012] | 4 | 54229293 | 54298245 | Human | 3856 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 620393 | Pdp1 | pyruvate dehydrogenase phosphatase catalytic subunit 1 | ENCODES a protein that exhibits calcium ion binding; magnesium ion binding; protein serine/threonine phosphatase activity; INVOLVED IN peptidyl-threonine dephosphorylation (ortholog); positive regulation of pyruvate decarboxylation to acetyl-CoA (ortholog); PARTICIPATES IN pyruvate metabolic pathway ; ASSOCIATED WITH genetic disease (ortholog); obesity (ortholog); Prostatic Neoplasms (ortholog); FOUND IN mitochondrion; INTERACTS WITH (+)-schisandrin B; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene | 5 | 30245699 | 30252494 | Rat | 151 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 3311 | Pfkl | phosphofructokinase, liver type | ENCODES a protein that exhibits 6-phosphofructokinase activity; ATP binding; fructose-6-phosphate binding; INVOLVED IN fructose 1,6-bisphosphate metabolic process; fructose 6-phosphate metabolic process; glycolytic process; PARTICIPATES IN glycolysis pathway; glycolysis/gluconeogenesis pathway; fruc tose and mannose metabolic pathway; ASSOCIATED WITH hemolytic anemia (ortholog); FOUND IN 6-phosphofructokinase complex (ortholog); cytosol (ortholog); INTERACTS WITH (-)-epigallocatechin 3-gallate; 17beta-estradiol; 2,2',4,4'-Tetrabromodiphenyl ether | 20 | 10663907 | 10685967 | Rat | 275 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 68419 | Pfkm | phosphofructokinase, muscle | ENCODES a protein that exhibits 6-phosphofructokinase activity; AMP binding; ATP binding; INVOLVED IN fructose 1,6-bisphosphate metabolic process; fructose 6-phosphate metabolic process; glycolytic process; PARTICIPATES IN Fanconi syndrome pathway; glycogen storage disease type VII pathway; glycolys is pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); glycogen storage disease (ortholog); FOUND IN 6-phosphofructokinase complex (ortholog); apical plasma membrane (ortholog); cytosol (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-Tetrachlorodibenzofuran; 2,4-D | 7 | 131100684 | 131138250 | Rat | 285 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 61893 | Pfkp | phosphofructokinase, platelet | ENCODES a protein that exhibits 6-phosphofructokinase activity; ATP binding; fructose-6-phosphate binding; INVOLVED IN fructose 1,6-bisphosphate metabolic process; fructose 6-phosphate metabolic process; glycolytic process; PARTICIPATES IN fructose and mannose metabolic pathway; galactose metabolic pathway; gluconeogenesis pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); syndromic microphthalmia 5 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); INTERACTS WITH 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine | 17 | 68639749 | 68704055 | Rat | 290 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 3312 | Pgam1 | phosphoglycerate mutase 1 | ENCODES a protein that exhibits phosphoglycerate mutase activity; bisphosphoglycerate mutase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); gluconeogenesis (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficien cy pathway; gluconeogenesis pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN neuronal cell body; nucleus; ooplasm; INTERACTS WITH (R,R,R)-alpha-tocopherol; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine | 1 | 250673152 | 250680762 | Rat | 250 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1583832 | Pgd | phosphogluconate dehydrogenase | ENCODES a protein that exhibits carbohydrate binding; carboxylic acid binding; NADP binding; INVOLVED IN D-gluconate metabolic process; NADP+ metabolic process; pentose-phosphate shunt; PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - oxidative phase; ribose 5-phosphate isomera se deficiency pathway; ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); INTERACTS WITH (R)-noradrenaline; 1-naphthyl isothiocyanate; 17alpha-ethynylestradiol | 5 | 164865830 | 164882029 | Rat | 276 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1319304 | PKP3 | plakophilin 3 | This gene encodes a member of the arm-repeat (armadillo) and plakophilin gene families. Plakophilin proteins contain numerous armadillo repeats, localize to cell desmosomes and nuclei, and participate in linking cadherins to intermediate filaments in the cytoskeleton. This protein may act in cellula r desmosome-dependent adhesion and signaling pathways. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Dec 2014] | 11 | 392596 | 404908 | Human | 148 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 14280261 | PPIA | peptidylprolyl isomerase A | ENCODES a protein that exhibits cyclosporin A binding (ortholog); heparan sulfate binding (ortholog); integrin binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); apoptotic process (ortholog); cell adhesion molecule production (ortholog); ASSOCIATED WITH aggressive pe riodontitis (ortholog); atopic dermatitis (ortholog); Bell's palsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog); INTERACTS WITH deoxynivalenol; ochratoxin A | | | | Pig | 92 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 3374 | Ppm1b | protein phosphatase, Mg2+/Mn2+ dependent, 1B | ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN N-terminal protein myristoylation (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of defens e response to virus (ortholog); PARTICIPATES IN mitogen activated protein kinase signaling pathway; ASSOCIATED WITH hypotonia-cystinuria syndrome (ortholog); Lynch syndrome (ortholog); Myocardial Ischemia (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3H-1,2-dithiole-3-thione; aconitine | 6 | 15399559 | 15460301 | Rat | 175 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 3377 | Ppp1cc | protein phosphatase 1 catalytic subunit gamma | ENCODES a protein that exhibits lamin binding; protein domain specific binding; protein phosphatase 1 binding; INVOLVED IN neuron differentiation; positive regulation of glial cell proliferation; blastocyst development (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathw ay; dopamine signaling pathway; glycogen biosynthetic pathway; ASSOCIATED WITH congestive heart failure; Spinal Cord Injuries; Ovarian Neoplasms (ortholog); FOUND IN dendritic spine; glutamatergic synapse; postsynapse; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; ammonium acetate; ammonium chloride | 12 | 40043822 | 40061301 | Rat | 212 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 13921544 | PPP3CB | protein phosphatase 3 catalytic subunit beta | ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein serine/threonine phosphatase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN calcineurin-mediated signaling (ortholog); heart development (ortholog); locomotion involved in locomotory behavior ( ortholog); PARTICIPATES IN calcineurin signaling pathway; dopamine signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH aortic valve stenosis (ortholog); focal segmental glomerulosclerosis (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN calcineurin complex (ortholog); protein-containing complex (ortholog); synapse (ortholog) | | | | Pig | 92 | UniProt , GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 3387 | Prkaa1 | protein kinase AMP-activated catalytic subunit alpha 1 | ENCODES a protein that exhibits AMP-activated protein kinase activity; ATP binding; kinase binding; INVOLVED IN cellular response to calcium ion; cellular response to ethanol; cellular response to glucose stimulus; PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pat hway; vascular endothelial growth factor signaling pathway; autophagy pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury; cholestasis; Diabetes Complications; FOUND IN apical plasma membrane; axon; cytoplasm; INTERACTS WITH (+)-schisandrin B; (R,R)-tramadol; 1,2,3,4,7,8-Hexachlorodibenzodioxin | 2 | 55967766 | 56003450 | Rat | 658 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 14279188 | PRKAR2B | protein kinase cAMP-dependent type II regulatory subunit beta | ENCODES a protein that exhibits cAMP binding (ortholog); cAMP-dependent protein kinase regulator activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); learning (ortholog); regulation of protein kinase activity (ortholog); PARTICIPATES I N protein kinase A (PKA) signaling pathway; ASSOCIATED WITH congestive heart failure (ortholog); granulosa cell tumor (ortholog); obesity (ortholog); FOUND IN cAMP-dependent protein kinase complex (ortholog); dendrite (ortholog); neuronal cell body (ortholog); INTERACTS WITH deoxynivalenol | | | | Pig | 61 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 1312601 | PRTN3 | proteinase 3 | Enables enzyme binding activity; serine-type endopeptidase activity; and signaling receptor binding activity. Involved in several processes, including mature conventional dendritic cell differentiation; neutrophil extravasation; and positive regulation of GTPase activity. Located in azurophil granul e lumen; cytosol; and plasma membrane raft. [provided by Alliance of Genome Resources, Jul 2025] | 19 | 840999 | 848175 | Human | 208 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1313491 | PSMG1 | proteasome assembly chaperone 1 | Enables molecular adaptor activity. Involved in chaperone-mediated protein complex assembly. Located in several cellular components, including Golgi apparatus; endoplasmic reticulum; and nucleoplasm. Part of protein folding chaperone complex. [provided by Alliance of Genome Resources, Jul 2025] | 21 | 39174769 | 39183514 | Human | 98 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 62047 | Ptbp1 | polypyrimidine tract binding protein 1 | ENCODES a protein that exhibits mRNA binding; regulatory region RNA binding; sequence-specific DNA binding; INVOLVED IN 3'-UTR-mediated mRNA stabilization; cardiac ventricle development; mRNA processing; PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcin oma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN neuron projection terminus; nucleoplasm (ortholog); nucleus (ortholog); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene | 7 | 10493199 | 10502957 | Rat | 175 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 14118392 | PTPN3 | protein tyrosine phosphatase non-receptor type 3 | ENCODES a protein that exhibits ATPase binding (inferred); cytoskeletal protein binding (inferred); hydrolase activity (inferred); INVOLVED IN liver regeneration (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); prostate cancer (ortholog); FOUND IN adherens junction (inferred); cytopla sm (inferred); cytoplasmic side of plasma membrane (inferred); INTERACTS WITH deoxynivalenol | | | | Pig | 51 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 1308297 | Rbm26 | RNA binding motif protein 26 | ENCODES a protein that exhibits metal ion binding (inferred); nucleic acid binding (inferred); RNA binding (inferred); ASSOCIATED WITH anthracosis (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 3-chloropropane-1,2-diol | 15 | 88299378 | 88379365 | Rat | 93 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 14272472 | RELA | RELA proto-oncogene, NF-kB subunit | ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); cellular response to hepatocyte growth factor stimulus (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN ceramide signaling pathway; interleukin-1 signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); adenocarcinoma (ortholog); alcohol dependence (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleolus (ortholog); INTERACTS WITH 1,3-thiazolidine-2,4-dione; 3,3',4,4'-tetrachlorobiphenyl; bisphenol A | | | | Pig | 443 | UniProt , GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1604848 | RHCE | Rh blood group CcEe antigens | The Rh blood group system is the second most clinically significant of the blood groups, second only to ABO. It is also the most polymorphic of the blood groups, with variations due to deletions, gene conversions, and missense mutations. The Rh blood group includes this gene which encodes both the R hC and RhE antigens on a single polypeptide and a second gene which encodes the RhD protein. The classification of Rh-positive and Rh-negative individuals is determined by the presence or absence of the highly immunogenic RhD protein on the surface of erythrocytes. A mutation in this gene results in amorph-type Rh-null disease. Alternative splicing of this gene results in multiple transcript variants encoding several different isoforms. [provided by RefSeq, Aug 2016] | 1 | 25362249 | 25430203 | Human | 58 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 2324318 | Rps4x | ribosomal protein S4, X-linked | ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN response to ethanol; positive regulation of cell population proliferation (ortholog); positive regulation of translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN ribosome; cytoplasmic ribonucleoprotein granule (ortholog); cytosolic ribosome (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2-nitrofluorene | X | 71338478 | 71342921 | Rat | 133 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1306706 | Rttn | rotatin | INVOLVED IN determination of left/right symmetry (ortholog); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog); INTERACTS WITH bisphenol A; gentamycin; paracetamol | 18 | 84495813 | 84673079 | Rat | 82 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1583843 | S1pr3 | sphingosine-1-phosphate receptor 3 | ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); inflammatory response (ortholog); negative regulation of establishment of endothelial barrier (ortholog); PARTICIPATES IN sphingosine 1-phosp hate signaling pathway; FOUND IN plasma membrane (ortholog); presynapse (ortholog); INTERACTS WITH acetamide; aldehydo-D-glucose; ammonium chloride | 17 | 13932773 | 13946213 | Rat | 170 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1308369 | Samhd1 | SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 | ENCODES a protein that exhibits deoxynucleoside triphosphate hydrolase activity (ortholog); dGTP binding (ortholog); dGTPase activity (ortholog); INVOLVED IN dATP catabolic process (ortholog); defense response to virus (ortholog); deoxyribonucleotide catabolic process (ortholog); ASSOCIATED WITH acu te myeloid leukemia (ortholog); Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 5 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); site of double-strand break (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 3-chloropropane-1,2-diol; 6-propyl-2-thiouracil | 3 | 166179742 | 166214448 | Rat | 223 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1308481 | Sdr42e1 | short chain dehydrogenase/reductase family 42E, member 1 | ENCODES a protein that exhibits oxidoreductase activity (inferred); oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (inferred); INVOLVED IN steroid biosynthetic process (inferred); ASSOCIATED WITH acromesomelic dysplasia 4 (ortholog); Experimental Liver Cirrhosi s (ortholog); FOUND IN endoplasmic reticulum membrane (inferred); INTERACTS WITH (+)-schisandrin B; 1-naphthyl isothiocyanate; 2,3,7,8-tetrachlorodibenzodioxine | 19 | 62624130 | 62636652 | Rat | 78 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1344783 | SEC11A | SEC11 homolog A, signal peptidase complex subunit | This gene encodes a member of the peptidase S26B family. The encoded protein is an 18kDa subunit of the signal peptidase complex and has been linked to cell migration and invasion, gastric cancer and lymph node metastasis. Alternative splicing results in multiple transcript variants. A related pseud ogene has been identified on chromosome 8. [provided by RefSeq, Dec 2012] | 15 | 84669544 | 84716139 | Human | 89 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1320418 | SEC14L1 | SEC14 like lipid binding 1 | The protein encoded by this gene belongs to the SEC14 cytosolic factor family. It has similarity to yeast SEC14 and to Japanese flying squid RALBP which suggests a possible role of the gene product in an intracellular transport system. Multiple alternatively spliced transcript variants have been fou nd for this gene; some variants represent read-through transcripts that include exons from the upstream gene C17orf86. [provided by RefSeq, Feb 2011] | 17 | 77088685 | 77217101 | Human | 112 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 13903538 | SERPINE1 | serpin family E member 1 | ENCODES a protein that exhibits protease binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN cellular response to aldosterone (ortholog); cellular response to angiotensin (ortholog); cellular response to ATP (ortholog); PARTICIPATES IN fibrinolysis pathway; hypox ia inducible factor pathway; oxygen homeostasis pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acquired Protein C Deficiency (ortholog); Acute Lung Injury (ortholog); FOUND IN chromaffin granule (ortholog); extracellular region (ortholog); extracellular space (ortholog); INTERACTS WITH anthra[1,9-cd]pyrazol-6(2H)-one; arecoline; bis(2-chloroethyl) sulfide | | | | Pig | 351 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 12248603 | SERPINH1 | serpin family H member 1 | ENCODES a protein that exhibits collagen binding (inferred); serine-type endopeptidase inhibitor activity (inferred); unfolded protein binding (inferred); INVOLVED IN chondrocyte development involved in endochondral bone morphogenesis (ortholog); collagen biosynthetic process (ortholog); collagen fi bril organization (ortholog); ASSOCIATED WITH osteogenesis imperfecta type 10; adult respiratory distress syndrome (ortholog); BCARD syndrome (ortholog); FOUND IN cytoplasm (inferred); endoplasmic reticulum (inferred); endoplasmic reticulum lumen (inferred) | 21 | 23032761 | 23041649 | Dog | 42 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1352309 | SGMS1 | sphingomyelin synthase 1 | The protein encoded by this gene is predicted to be a five-pass transmembrane protein. This gene may be predominately expressed in brain. [provided by RefSeq, Jul 2008] | 10 | 50305600 | 50625184 | Human | 180 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 14029613 | SLC22A4 | solute carrier family 22 member 4 | ENCODES a protein that exhibits quaternary ammonium group transmembrane transporter activity (ortholog); INVOLVED IN acetylcholine uptake (ortholog); carnitine metabolic process (ortholog); carnitine transport (ortholog); PARTICIPATES IN cisplatin response pathway; ASSOCIATED WITH chronic obstructiv e pulmonary disease (ortholog); Coxsackievirus Infections (ortholog); Enterovirus Infections (ortholog); FOUND IN apical plasma membrane (ortholog); mitochondrion (ortholog); neuronal cell body (ortholog) | | | | Pig | 65 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1604178 | SLC25A42 | solute carrier family 25 member 42 | This gene encodes a solute carrier family 25 protein. Solute carrier family 25 proteins are localized to mitochondria and play critical roles in the transport of molecules across the inner mitochondrial membrane. The encoded protein is a mitochondrial transporter for coenzyme A (CoA) and adenosine 3 ',5'-diphosphate. [provided by RefSeq, Feb 2012] | 19 | 19063994 | 19113030 | Human | 136 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 12210049 | SLC35A2 | solute carrier family 35 member A2 | ENCODES a protein that exhibits antiporter activity (inferred); pyrimidine nucleotide-sugar transmembrane transporter activity (inferred); INVOLVED IN UDP-galactose transmembrane transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); congenital disorder of glycosylation (ortholog); cong enital disorder of glycosylation type IIm (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) | X | 42060568 | 42071330 | Dog | 29 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 12100948 | SLC35B4 | solute carrier family 35 member B4 | ENCODES a protein that exhibits UDP-N-acetylglucosamine transmembrane transporter activity (inferred); UDP-xylose transmembrane transporter activity (inferred); INVOLVED IN regulation of gluconeogenesis (ortholog); FOUND IN endoplasmic reticulum (ortholog) | 14 | 3120901 | 3166622 | Dog | 17 | GenBank Nucleotide | gene, protein-coding, PROVISIONAL [RefSeq] |
| 733072 | SLC40A1 | solute carrier family 40 member 1 | The protein encoded by this gene is a cell membrane protein that may be involved in iron export from duodenal epithelial cells. Defects in this gene are a cause of hemochromatosis type 4 (HFE4). [provided by RefSeq, Jul 2008] | 2 | 189560590 | 189580786 | Human | 479 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1601745 | SLC44A2 | solute carrier family 44 member 2 (CTL2 blood group) | Enables choline transmembrane transporter activity and ethanolamine transmembrane transporter activity. Involved in choline transport; ethanolamine transport; and transmembrane transport. Located in mitochondrial outer membrane and plasma membrane. [provided by Alliance of Genome Resources, Jul 2025 ] | 19 | 10602455 | 10644557 | Human | 141 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 14217214 | SLC9A3 | solute carrier family 9 member A3 | ENCODES a protein that exhibits PDZ domain binding (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN circadian rhythm (ortholog); receptor-mediated endocytosis (ortholog); regulation of pH (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH autism spectrum d isorder (ortholog); chronic kidney disease (ortholog); congenital secretory sodium diarrhea 8 (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog); INTERACTS WITH ammonia | | | | Pig | 77 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 1560377 | Snapin | SNAP-associated protein | ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); SNARE binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); autophagosome maturation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN glut amatergic synapse; presynapse; secretory granule; INTERACTS WITH acetamide; bisphenol A; cadmium dichloride | 2 | 178269157 | 178271746 | Rat | 145 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 2304147 | SNHG20 | small nucleolar RNA host gene 20 | Predicted to be involved in several processes, including cellular response to fatty acid; macrophage activation; and tyrosine phosphorylation of STAT protein. Predicted to be located in nucleolus. Implicated in lung non-small cell carcinoma. [provided by Alliance of Genome Resources, Jul 2025] | 17 | 77088643 | 77094986 | Human | 25 | GenBank Nucleotide | gene, ncrna, VALIDATED [RefSeq] |
| 732035 | SP1 | Sp1 transcription factor | The protein encoded by this gene is a zinc finger transcription factor that binds to GC-rich motifs of many promoters. The encoded protein is involved in many cellular processes, including cell differentiation, cell growth, apoptosis, immune responses, response to DNA damage, and chromatin remodelin g. Post-translational modifications such as phosphorylation, acetylation, glycosylation, and proteolytic processing significantly affect the activity of this protein, which can be an activator or a repressor. Three transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2014] | 12 | 53380176 | 53416446 | Human | 585 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 737205 | SRY | sex determining region Y | This intronless gene encodes a transcription factor that is a member of the high mobility group (HMG)-box family of DNA-binding proteins. This protein is the testis-determining factor (TDF), which initiates male sex determination. Mutations in this gene give rise to XY females with gonadal dysgenesi s (Swyer syndrome); translocation of part of the Y chromosome containing this gene to the X chromosome causes XX male syndrome. [provided by RefSeq, Jul 2008] | Y | 2786855 | 2787682 | Human | 226 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1310259 | Ssna1 | SS nuclear autoantigen 1 | ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN axon arborization (ortholog); axon extension (ortholog); axonogenesis (ortholog); FOUND IN axon (ortholog); axoneme (ortholog); centriole (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodi benzodioxine; 2,4,6-trinitrotoluene; 4,4'-sulfonyldiphenol | 3 | 28483107 | 28484571 | Rat | 88 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 13872079 | ST6GAL1 | ST6 beta-galactoside alpha-2,6-sialyltransferase 1 | ENCODES a protein that exhibits sialyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); negative regulation of chemotaxis (ortholog); negative regulation of macrophage apoptotic process (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); allergic con tact dermatitis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Golgi medial cisterna (ortholog); Golgi trans cisterna (ortholog) | | | | Pig | 35 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 1314951 | SUPT4H1 | SPT4 homolog, DSIF elongation factor subunit | This gene encodes the small subunit of DRB (5,6-dichloro-1-beta-d-ribofuranosylbenzimidazole) sensitivity-inducing factor (DSIF) complex, which regulates mRNA processing and transcription elongation by RNA polymerase II. The encoded protein is localized to the nucleus and interacts with the large su bunit (SUPT5H) to form the DSIF complex. Related pseudogenes have been identified on chromosomes 2 and 12. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Nov 2012] | 17 | 58345178 | 58352201 | Human | 70 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1303113 | Syap1 | synapse associated protein 1 | INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to insulin stimulus (ortholog); cellular response to insulin-like growth factor stimulus (ortholog); FOUND IN axon (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,6-dinitrotoluene; 3-chloropropane-1,2-diol | X | 35423947 | 35458472 | Rat | 115 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 736160 | SYK | spleen associated tyrosine kinase | This gene encodes a member of the family of non-receptor type Tyr protein kinases. This protein is widely expressed in hematopoietic cells and is involved in coupling activated immunoreceptors to downstream signaling events that mediate diverse cellular responses, including proliferation, differenti ation, and phagocytosis. It is thought to be a modulator of epithelial cell growth and a potential tumour suppressor in human breast carcinomas. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2010] | 9 | 90801600 | 90898549 | Human | 451 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 1344756 | SYNPO2 | synaptopodin 2 | Enables alpha-actinin binding activity and filamin binding activity. Involved in positive regulation of actin filament bundle assembly; positive regulation of cell migration; and regulation of Rho-dependent protein serine/threonine kinase activity. Located in several cellular components, including Z disc; focal adhesion; and stress fiber. [provided by Alliance of Genome Resources, Jul 2025] | 4 | 118850681 | 119061247 | Human | 126 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 14005569 | TBC1D1 | TBC1 domain family member 1 | ENCODES a protein that exhibits GTPase activator activity (inferred); INVOLVED IN negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); regulation of cilium assembly (ortholog); regulation of protein localization (ortholog); PARTICIPATES IN insulin re sponsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH CAKUT (ortholog); genetic disease (ortholog); obesity (ortholog); FOUND IN nucleolus (ortholog) | | | | Pig | 21 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 1310907 | Tlk2 | tousled-like kinase 2 | ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); chromosome segregation (ortholog); DNA damage response (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 57 (ortholog); Developmental Disease (ortholog); FOUND IN intermediate filament (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 2,6-dinitrotoluene | 10 | 90648623 | 90748427 | Rat | 124 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 6481297 | TM4SF1-AS1 | TM4SF1 antisense RNA 1 | INTERACTS WITH aflatoxin B1; bisphenol A; okadaic acid | 3 | 149377778 | 149386583 | Human | 4 | GenBank Nucleotide | gene, ncrna, VALIDATED [RefSeq] |
| 708403 | Tmem176b | transmembrane protein 176B | INVOLVED IN negative regulation of dendritic cell differentiation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); long QT syndrome (ortholog); FOUND IN membrane (inferred); nuclear membrane (inferred); INTERACTS WITH (+)-schisandrin B; 17alpha-ethynylestradiol; 17beta-estradiol | 4 | 79097808 | 79105263 | Rat | 119 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1344776 | TMEM18 | transmembrane protein 18 | Predicted to enable DNA binding activity. Involved in cell migration. Located in nuclear membrane. [provided by Alliance of Genome Resources, Jul 2025] | 2 | 663877 | 677406 | Human | 60 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 6495353 | Tmem45a | transmembrane protein 45A | ASSOCIATED WITH COVID-19 (ortholog); Lung Neoplasms (ortholog); FOUND IN membrane (inferred); INTERACTS WITH all-trans-retinoic acid; alpha-Zearalanol; bisphenol A | 11 | 57181686 | 57268630 | Rat | 97 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1308940 | Tmod4 | tropomodulin 4 | ENCODES a protein that exhibits tropomyosin binding (ortholog); INVOLVED IN pointed-end actin filament capping (inferred); FOUND IN striated muscle thin filament (ortholog); INTERACTS WITH 2,6-dinitrotoluene; 4-amino-2,6-dinitrotoluene; 6-propyl-2-thiouracil | 2 | 185384547 | 185389549 | Rat | 73 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 621057 | Tnc | tenascin C | ENCODES a protein that exhibits integrin binding (ortholog); syndecan binding (ortholog); INVOLVED IN bud outgrowth involved in lung branching; cellular response to prostaglandin D stimulus; cellular response to retinoic acid; PARTICIPATES IN syndecan signaling pathway; cell-extracellular matrix sig naling pathway; ASSOCIATED WITH cholangiocarcinoma; Experimental Diabetes Mellitus; high grade glioma; FOUND IN extracellular matrix of synaptic cleft; glutamatergic synapse; basement membrane (ortholog); INTERACTS WITH (+)-pilocarpine; 1-naphthyl isothiocyanate; 11-deoxycorticosterone | 5 | 82391340 | 82476197 | Rat | 405 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1354073 | TNFRSF13C | TNF receptor superfamily member 13C | B cell-activating factor (BAFF) enhances B-cell survival in vitro and is a regulator of the peripheral B-cell population. Overexpression of Baff in mice results in mature B-cell hyperplasia and symptoms of systemic lupus erythematosus (SLE). Also, some SLE patients have increased levels of BAFF in s erum. Therefore, it has been proposed that abnormally high levels of BAFF may contribute to the pathogenesis of autoimmune diseases by enhancing the survival of autoreactive B cells. The protein encoded by this gene is a receptor for BAFF and is a type III transmembrane protein containing a single extracellular cysteine-rich domain. It is thought that this receptor is the principal receptor required for BAFF-mediated mature B-cell survival. [provided by RefSeq, Jul 2008] | 22 | 41922032 | 41926806 | Human | 112 | GenBank Nucleotide | gene, protein-coding, REVIEWED [RefSeq] |
| 13878031 | TNK2 | tyrosine kinase non receptor 2 | ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN phosphorylation (ortholog); positive regulation of peptidyl-tyrosine phosphorylation (ortholog); regulation of clathrin- dependent endocytosis (ortholog); ASSOCIATED WITH Autosomal Recessive Infantile Epilepsy (ortholog); developmental and epileptic encephalopathy (ortholog); epilepsy (ortholog); FOUND IN axon (ortholog); cytoophidium (ortholog); dendrite (ortholog) | | | | Pig | 74 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 14208819 | TRIB3 | tribbles pseudokinase 3 | ENCODES a protein that exhibits kinase activity (ortholog); INVOLVED IN negative regulation of protein kinase activity (ortholog); regulation of autophagy (ortholog); regulation of MAP kinase activity (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Experimental Liver Cirrhosis ( ortholog); Insulin Resistance (ortholog); FOUND IN nucleoplasm (inferred); nucleus (inferred); INTERACTS WITH deoxynivalenol; graphene oxide | | | | Pig | 52 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 621562 | Ubb | ubiquitin B | INVOLVED IN adipose tissue development (ortholog); energy homeostasis (ortholog); fat pad development (ortholog); PARTICIPATES IN Parkinson's disease pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); FOUND IN mitochondrion (ortholog); neuron projection (ortholog); neuronal cell body (ortholog); INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride | 10 | 47746923 | 47748628 | Rat | 152 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1564700 | Ubp1 | upstream binding protein 1 | ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); negati ve regulation of viral transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); INTERACTS WITH 2,3,4,7,8-Pentachlorodibenzofuran; bisphenol A; gentamycin | 8 | 122748005 | 122793824 | Rat | 72 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1308045 | Usp12 | ubiquitin specific peptidase 12 | ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); deubiquitinase activity (ortholog); INVOLVED IN protein deubiquitination (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN cytoplasm (ortholog); nucleus (ortholog); peptidase complex (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; bisphenol A | 12 | 13423625 | 13477547 | Rat | 105 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1604181 | VSTM1 | V-set and transmembrane domain containing 1 | Predicted to enable cytokine activity. Predicted to be involved in immune response-regulating signaling pathway. Predicted to be located in extracellular space and membrane. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Jul 2025] | 19 | 54040825 | 54063897 | Human | 25 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 14061593 | XXYLT1 | xyloside xylosyltransferase 1 | ENCODES a protein that exhibits glycosyltransferase activity (inferred); magnesium ion binding (inferred); manganese ion binding (inferred); INVOLVED IN protein O-linked glycosylation via glucose (inferred); protein O-linked glycosylation via N-acetyl-galactosamine (inferred); ASSOCIATED WITH atrial fibrillation (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum membrane (inferred); INTERACTS WITH deoxynivalenol | | | | Pig | 23 | GenBank Nucleotide | gene, protein-coding, MODEL [RefSeq] |
| 1343061 | ZCCHC2 | zinc finger CCHC-type containing 2 | Predicted to enable nucleic acid binding activity; phosphatidylinositol binding activity; and zinc ion binding activity. Located in cytoplasm. [provided by Alliance of Genome Resources, Jul 2025] | 18 | 62523025 | 62586729 | Human | 92 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1593979 | Zfp58 | zinc finger protein 58 | ENCODES a protein that exhibits DNA binding (inferred); metal ion binding (inferred); zinc ion binding (inferred); INVOLVED IN regulation of DNA-templated transcription (inferred); FOUND IN nucleus (inferred); INTERACTS WITH bisphenol A; (-)-epigallocatechin 3-gallate (ortholog); 1,2-dimethylhydrazi ne (ortholog) | 1 | 36848858 | 36861605 | Rat | 36 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1566325 | Zfp874b | zinc finger protein 874b | ENCODES a protein that exhibits DNA binding (inferred); metal ion binding (inferred); zinc ion binding (inferred); INVOLVED IN regulation of DNA-templated transcription (inferred); FOUND IN nucleus (inferred); INTERACTS WITH (+)-schisandrin B; 6-propyl-2-thiouracil; amitrole | 1 | 36830702 | 36842705 | Rat | 34 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 61854 | Zranb2 | zinc finger RANBP2-type containing 2 | ENCODES a protein that exhibits metal ion binding (inferred); RNA binding (inferred); zinc ion binding (inferred); INVOLVED IN mRNA processing (inferred); RNA processing (inferred); RNA splicing (inferred); FOUND IN nucleoplasm (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitr otoluene; 3H-1,2-dithiole-3-thione | 2 | 249232010 | 249245786 | Rat | 101 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 1565468 | Zzz3 | zinc finger, ZZ-type containing 3 | ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN chromatin organization (ortholog); regulation of cell cycle (ortholog); regulation of cell division (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH pancreatic ductal carcinoma (ort holog); FOUND IN ATAC complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog); INTERACTS WITH bisphenol A; methimazole; oxaliplatin | 2 | 243990305 | 244057251 | Rat | 100 | GenBank Nucleotide | gene, protein-coding, VALIDATED [RefSeq] |
| 734288 | PGGT1B | protein geranylgeranyltransferase type I subunit beta | Protein geranylgeranyltransferase type I (GGTase-I) transfers a geranylgeranyl group to the cysteine residue of candidate proteins containing a C-terminal CAAX motif in which 'A' is an aliphatic amino acid and 'X' is leucine (summarized by Zhang et al., 1994 [PubMed 8106351]). The enzyme is composed of a 48-kD alpha subunit (FNTA; MIM 134635) and a 43-kD beta subunit, encoded by the PGGT1B gene. The FNTA gene encodes the alpha subunit for both GGTase-I and the related enzyme farnesyltransferase.[supplied by OMIM, Mar 2010] | 5 | 115204012 | 115262877 | Human | 103 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 1322248 | ROBO3 | roundabout guidance receptor 3 | This gene is a member of the Roundabout (ROBO) gene family that controls neurite outgrowth, growth cone guidance, and axon fasciculation. ROBO proteins are a subfamily of the immunoglobulin transmembrane receptor superfamily. SLIT proteins 1-3, a family of secreted chemorepellants, are ligands for R OBO proteins and SLIT/ROBO interactions regulate myogenesis, leukocyte migration, kidney morphogenesis, angiogenesis, and vasculogenesis in addition to neurogenesis. This gene, ROBO3, has a putative extracellular domain with five immunoglobulin (Ig)-like loops and three fibronectin (Fn) type III motifs, a transmembrane segment, and a cytoplasmic tail with three conserved signaling motifs: CC0, CC2, and CC3 (CC for conserved cytoplasmic). Unlike other ROBO family members, ROBO3 lacks motif CC1. The ROBO3 gene regulates axonal navigation at the ventral midline of the neural tube. In mouse, loss of Robo3 results in a complete failure of commissural axons to cross the midline throughout the spinal cord and the hindbrain. Mutations ROBO3 result in horizontal gaze palsy with progressive scoliosis (HGPPS); an autosomal recessive disorder characterized by congenital absence of horizontal gaze, progressive scoliosis, and failure of the corticospinal and somatosensory axon tracts to cross the midline in the medulla. [provided by RefSeq, May 2019] | 11 | 124865432 | 124881471 | Human | 162 | description | gene, protein-coding, REVIEWED [RefSeq] |
| 16555693 | AL356417.2 | novel transcript, antisense to FNDC1 | | | | | Human | | name | gene, lncrna |
| 16555492 | AL591719.2 | novel transcript, antisense to FNDC7 | | | | | Human | | name | gene, lncrna |
| 16563566 | AC024361.1 | novel transcript, sense intronic FN3K | | | | | Human | | name | gene, lncrna |
| 16567476 | AL161421.1 | novel transcript, antisense to FNDC3A | | | | | Human | | name | gene, lncrna |
| 16570304 | AC007326.3 | fructosamine 3 kinase (FN3K) pseudogene | | | | | Human | | name | gene, unprocessed_pseudogene |
| 16566277 | AL139022.2 | novel transcript, antisense to CHURC1-FNTB | | | | | Human | | name | gene, lncrna |
| 16556900 | AP000358.1 | pseudogene similar to part of fructosamine 3 kinase (FN3K) | | | | | Human | | name | gene, processed_pseudogene |
| 734406 | Ank | progressive ankylosis | Enables inorganic diphosphate transmembrane transporter activity. Involved in several processes, including cementum mineralization; diphosphate metabolic process; and inhibition of non-skeletal tissue mineralization. Located in plasma membrane. Is active in extracellular region. Is expressed in seve ral structures, including bone; connective tissue; olfactory epithelium; telencephalon; and vibrissa follicle. Used to study craniometaphyseal dysplasia. Human ortholog(s) of this gene implicated in autosomal dominant craniometaphyseal dysplasia and chondrocalcinosis. Orthologous to human ANKH (ANKH inorganic pyrophosphate transport regulator). [provided by Alliance of Genome Resources, Jul 2025] | 15 | 27466763 | 27594995 | Mouse | 258 | old_gene_name | gene, protein-coding, VALIDATED [RefSeq] |
| 1623959 | Rnf168 | ring finger protein 168 | Predicted to enable several functions, including K63-linked polyubiquitin modification-dependent protein binding activity; histone H2AK15 ubiquitin ligase activity; and ubiquitin binding activity. Involved in isotype switching. Acts upstream of or within cellular response to UV and regulation of pro tein localization. Part of DNA repair complex. Is expressed in central nervous system and genitourinary system. Used to study RIDDLE syndrome. Human ortholog(s) of this gene implicated in RIDDLE syndrome. Orthologous to human RNF168 (ring finger protein 168). [provided by Alliance of Genome Resources, Apr 2025] | 16 | 32096279 | 32120260 | Mouse | 200 | old_gene_name | gene, protein-coding, VALIDATED [RefSeq] |
| 16553015 | AC062016.1 | pseudogene similar to part of fibronectin type III domain containing 3A (FNDC3A) | | | | | Human | | name | gene, processed_pseudogene |
| 1354263 | ELSPBP1 | epididymal sperm binding protein 1 | The protein encoded by this gene belongs to the sperm-coating protein family of epididymal origin. This protein and its canine homolog are the first known examples of proteins with four tandemly arranged fibronectin type 2 (Fn2) domains in the Fn weight:700;'>Fn2-module protein family. [provided by RefSeq, Jul 2008] | 19 | 47994632 | 48025154 | Human | 13 | description | gene, protein-coding, REVIEWED [RefSeq] |
| 1615711 | Flcn | folliculin | Predicted to enable enzyme binding activity and enzyme inhibitor activity. Predicted to contribute to GTPase activator activity. Involved in several processes, including energy homeostasis; negative regulation of brown fat cell differentiation; and negative regulation of metabolic process. Acts upst ream of or within with a positive effect on negative regulation of cell population proliferation. Acts upstream of or within several processes, including negative regulation of cell population proliferation; regulation of pro-B cell differentiation; and regulation of signal transduction. Predicted to be located in several cellular components, including cilium; lysosomal membrane; and microtubule cytoskeleton. Predicted to be part of FNIP-folliculin RagC/D GAP. Predicted to be active in cytosol. Predicted to colocalize with cell-cell contact zone and midbody. Is expressed in several structures, including alimentary system; genitourinary system; hemolymphoid system gland; limb bud; and lung. Used to study Birt-Hogg-Dube syndrome and nonpapillary renal cell carcinoma. Human ortholog(s) of this gene implicated in Birt-Hogg-Dube syndrome; colorectal cancer; primary spontaneous pneumothorax; and renal cell carcinoma. Orthologous to human FLCN (folliculin). [provided by Alliance of Genome Resources, Jul 2025] | 11 | 59682234 | 59706138 | Mouse | 358 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 18901301 | Flcn | folliculin | ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell-cell junction assembly (ortholog); cellular response to amino acid starvation (ortholog); cellular response to starvation (ortholog); PARTI CIPATES IN mTOR signaling pathway; ASSOCIATED WITH Birt-Hogg-Dube syndrome (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); colon carcinoma (ortholog); FOUND IN cell-cell contact zone (ortholog); cytoplasm (ortholog); FNIP-folliculin RagC/D GAP (ortholog) | | | | Naked Mole-Rat | 135 | description | gene, protein-coding, MODEL [RefSeq] |
| 1346005 | FSD2 | fibronectin type III and SPRY domain containing 2 | This gene encodes a protein that belongs to the FN3/SPRY family of proteins. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Aug 2013] | 15 | 82755362 | 82806069 | Human | 48 | description | gene, protein-coding, REVIEWED [RefSeq] |
| 735078 | Lamtor1 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 | ENCODES a protein that exhibits GTPase binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to nutrient levels (ortholog); cholesterol homeostasis (ortholog ); PARTICIPATES IN mTOR signaling pathway; FOUND IN late endosome membrane; membrane raft; FNIP-folliculin RagC/D GAP (ortholog); INTERACTS WITH 1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile; 2,3,7,8-Tetrachlorodibenzofuran; bisphenol A | 1 | 165684001 | 165689698 | Rat | 137 | description | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1605997 | LAMTOR1 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 | Enables GTPase binding activity and protein-membrane adaptor activity. Contributes to guanyl-nucleotide exchange factor activity and molecular adaptor activity. Involved in several processes, including cholesterol homeostasis; positive regulation of TORC1 signaling; and regulation of cholesterol tra nsport. Located in lysosome. Part of FNIP-folliculin RagC/D GAP. Is active in Ragulator complex and lysosomal membrane. [provided by Alliance of Genome Resources, Apr 2025] | 11 | 72097292 | 72103297 | Human | 143 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 8919443 | Lamtor1 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 | ENCODES a protein that exhibits GTPase binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to nutrient levels (ortholog); cholesterol homeostasis (ortholog ); PARTICIPATES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); Golgi apparatus (ortholog); late endosome membrane (ortholog) | NW_004955414 | 19228615 | 19235523 | Chinchilla | 59 | description | gene, protein-coding, MODEL [RefSeq] |
| 18933279 | Lamtor1 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 | ENCODES a protein that exhibits GTPase binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); endosome organization (ortholog); intracellular protein localization (ortholog); PARTI CIPATES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); Golgi apparatus (ortholog); lysosomal membrane (ortholog) | | | | Naked Mole-Rat | 66 | description | gene, protein-coding, MODEL [RefSeq] |
| 625996054 | Lamtor1 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 | ENCODES a protein that exhibits GTPase binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to nutrient levels (ortholog); cholesterol homeostasis (ortholog ); PARTICIPATES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); Golgi apparatus (ortholog); late endosome membrane (ortholog) | | | | Black Rat | 59 | description | gene, protein-coding, MODEL [RefSeq] |
| 1562501 | Lamtor2 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); fibroblast migration (ortholog); intracellular protein localization (ortholog); PARTICIPATES IN mTOR signalin g pathway; ASSOCIATED WITH Immunodeficiency due to Defect in MAPBP-Interacting Protein (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosomal membrane (ortholog); INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; acetamide | 2 | 176306353 | 176310617 | Rat | 106 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 9018174 | Lamtor2 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); fibroblast migration (ortholog); intracellular protein localization (ortholog); PARTICIPATES IN mTOR signalin g pathway; ASSOCIATED WITH Immunodeficiency due to Defect in MAPBP-Interacting Protein (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) | NW_004955545 | 2237506 | 2242070 | Chinchilla | 27 | description | gene, protein-coding, MODEL [RefSeq] |
| 11860878 | LAMTOR2 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (inferred); molecular adaptor activity (inferred); INVOLVED IN fibroblast migration (ortholog); positive regulation of MAPK cascade (ortholog); protein localization to cell junction (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Immunodeficiency due to Defect in MAPBP-Interacting Protein (ortholog); FOUND IN cytoplasm (inferred); FNIP-folliculin RagC/D GAP (inferred); late endosome (inferred) | 1 | 131396937 | 131400695 | Bonobo | 33 | description | gene, protein-coding, MODEL [RefSeq] |
| 12392149 | LAMTOR2 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (inferred); molecular adaptor activity (inferred); INVOLVED IN fibroblast migration (ortholog); positive regulation of MAPK cascade (ortholog); protein localization to cell junction (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Immunodeficiency due to Defect in MAPBP-Interacting Protein (ortholog); FOUND IN cytoplasm (inferred); FNIP-folliculin RagC/D GAP (inferred); late endosome (inferred); INTERACTS WITH mocetinostat | 7 | 41760632 | 41764926 | Dog | 37 | description | gene, protein-coding, MODEL [RefSeq] |
| 12629903 | Lamtor2 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (inferred); molecular adaptor activity (inferred); INVOLVED IN fibroblast migration (ortholog); positive regulation of MAPK cascade (ortholog); protein localization to cell junction (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Immunodeficiency due to Defect in MAPBP-Interacting Protein (ortholog); FOUND IN cytoplasm (inferred); FNIP-folliculin RagC/D GAP (inferred); late endosome (inferred) | NW_004936580 | 5316748 | 5320364 | Squirrel | 33 | description | gene, protein-coding, MODEL [RefSeq] |
| 14113745 | LAMTOR2 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (inferred); molecular adaptor activity (inferred); INVOLVED IN fibroblast migration (ortholog); positive regulation of MAPK cascade (ortholog); protein localization to cell junction (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Immunodeficiency due to Defect in MAPBP-Interacting Protein (ortholog); FOUND IN cytoplasm (inferred); FNIP-folliculin RagC/D GAP (inferred); late endosome (inferred) | | | | Pig | 36 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 18742552 | LAMTOR2 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (inferred); molecular adaptor activity (inferred); INVOLVED IN fibroblast migration (ortholog); positive regulation of MAPK cascade (ortholog); protein localization to cell junction (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Immunodeficiency due to Defect in MAPBP-Interacting Protein (ortholog); FOUND IN cytoplasm (inferred); FNIP-folliculin RagC/D GAP (inferred); late endosome (inferred) | | | | Green Monkey | 33 | description | gene, protein-coding, MODEL [RefSeq] |
| 18930613 | Lamtor2 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); fibroblast migration (ortholog); intracellular protein localization (ortholog); PARTICIPATES IN mTOR signalin g pathway; ASSOCIATED WITH Immunodeficiency due to Defect in MAPBP-Interacting Protein (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) | | | | Naked Mole-Rat | 34 | description | gene, protein-coding, MODEL [RefSeq] |
| 626071438 | Lamtor2 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); fibroblast migration (ortholog); intracellular protein localization (ortholog); PARTICIPATES IN mTOR signalin g pathway; ASSOCIATED WITH Immunodeficiency due to Defect in MAPBP-Interacting Protein (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) | | | | Black Rat | 27 | description | gene, protein-coding, MODEL [RefSeq] |
| 1307133 | Lamtor3 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); kinase activator activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); intracellular protein localization (ortholog); positive regulation of M APK cascade (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosomal membrane (ortholog); INTERACTS WITH 1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile; 2,6-dinitrotoluene; amphetamine | 2 | 229084795 | 229097028 | Rat | 119 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 8998286 | Lamtor3 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); kinase activator activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); intracellular protein localization (ortholog); positive regulation of M APK cascade (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) | NW_004955496 | 7789210 | 7809143 | Chinchilla | 29 | description | gene, protein-coding, MODEL [RefSeq] |
| 12428446 | LAMTOR3 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); kinase activator activity (ortholog); INVOLVED IN intracellular protein localization (ortholog); positive regulation of MAPK cascade (ortholog); positive regulation of TOR signaling (ortholog); PARTICIPATES IN mTO R signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) | 32 | 21820853 | 21834443 | Dog | 31 | description | gene, protein-coding, MODEL [RefSeq] |
| 18775901 | LAMTOR3 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); kinase activator activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN intracellular protein localization (ortholog); positive regulation of MAPK cascade (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) | | | | Green Monkey | 31 | description | gene, protein-coding, MODEL [RefSeq] |
| 18926929 | Lamtor3 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); kinase activator activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN intracellular protein localization (ortholog); positive regulation of MAPK cascade (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) | | | | Naked Mole-Rat | 31 | description | gene, protein-coding, MODEL [RefSeq] |
| 626116777 | Lamtor3 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); kinase activator activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); intracellular protein localization (ortholog); positive regulation of M APK cascade (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) | | | | Black Rat | 29 | description | gene, protein-coding, MODEL [RefSeq] |
| 1309735 | Lamtor4 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); positive regulation of TOR signaling (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICIPA TES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog); lysosome (ortholog); INTERACTS WITH 1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine | 12 | 22372269 | 22376090 | Rat | 76 | description | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1320233 | Lamtor4 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 | Predicted to contribute to guanyl-nucleotide exchange factor activity and molecular adaptor activity. Predicted to be involved in several processes, including cellular response to amino acid stimulus; positive regulation of TORC1 signaling; and protein localization to lysosome. Predicted to be locat ed in intracellular membrane-bounded organelle. Predicted to be part of FNIP-folliculin RagC/D GAP and Ragulator complex. Predicted to be active in lysosomal membrane. Is expressed in brain and retina layer. Orthologous to human LAMTOR4 (late endosomal/lysosomal adaptor, MAPK and MTOR activator 4). [provided by Alliance of Genome Resources, Apr 2025] | 5 | 138253744 | 138257657 | Mouse | 105 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 1604690 | LAMTOR4 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 | Contributes to guanyl-nucleotide exchange factor activity and molecular adaptor activity. Involved in several processes, including cellular response to amino acid stimulus; positive regulation of TORC1 signaling; and protein localization to lysosome. Located in lysosome. Part of FN ight:700;'>FNIP-folliculin RagC/D GAP and Ragulator complex. Is active in lysosomal membrane. [provided by Alliance of Genome Resources, Jul 2025] | 7 | 100148918 | 100154203 | Human | 75 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 8737456 | Lamtor4 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); positive regulation of TOR signaling (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICIPA TES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) | NW_004955573 | 649604 | 653185 | Chinchilla | 18 | description | gene, protein-coding, MODEL [RefSeq] |
| 11972499 | LAMTOR4 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN positive regulation of TORC1 signaling (ortholog); protein localization to lysosome (ortholog); regulation of cell size (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog) | 7 | 92183617 | 92188967 | Bonobo | 22 | description | gene, protein-coding, MODEL [RefSeq] |
| 12140785 | LAMTOR4 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (inferred); molecular adaptor activity (inferred); INVOLVED IN cellular response to amino acid stimulus (inferred); positive regulation of TOR signaling (inferred); positive regulation of TORC1 signaling (inferred); PARTICIPA TES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (inferred); lysosomal membrane (inferred); lysosome (inferred) | 6 | 9372728 | 9376047 | Dog | 26 | description | gene, protein-coding, MODEL [RefSeq] |
| 12473827 | Lamtor4 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (inferred); molecular adaptor activity (inferred); INVOLVED IN cellular response to amino acid stimulus (inferred); positive regulation of TOR signaling (inferred); positive regulation of TORC1 signaling (inferred); PARTICIPA TES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (inferred); lysosomal membrane (inferred); lysosome (inferred) | NW_004936543 | 408345 | 411723 | Squirrel | 26 | description | gene, protein-coding, MODEL [RefSeq] |
| 13906202 | LAMTOR4 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 | ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN positive regulation of TORC1 signaling (ortholog); protein localization to lysosome (ortholog); regulation of cell size (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN FN pan>IP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog) | | | | Pig | 21 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 18706465 | LAMTOR4 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (inferred); molecular adaptor activity (inferred); INVOLVED IN cellular response to amino acid stimulus (inferred); positive regulation of TOR signaling (inferred); positive regulation of TORC1 signaling (inferred); PARTICIPA TES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (inferred); lysosomal membrane (inferred); lysosome (inferred) | | | | Green Monkey | 26 | description | gene, protein-coding, MODEL [RefSeq] |
| 18914068 | Lamtor4 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN positive regulation of TORC1 signaling (ortholog); protein localization to lysosome (ortholog); regulation of cell size (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog) | | | | Naked Mole-Rat | 22 | description | gene, protein-coding, MODEL [RefSeq] |
| 626010050 | Lamtor4 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); positive regulation of TOR signaling (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICIPA TES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) | | | | Black Rat | 18 | description | gene, protein-coding, MODEL [RefSeq] |
| 1305005 | Lamtor5 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of canonical NF-kappaB signal transd uction (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); glucose intolerance (ortholog); FOUND IN cytosol (ortholog); FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog); INTERACTS WITH 1-[3-(dimethylamino)propyl]-1-(4-fluorophenyl)-1,3-dihydro-2-benzofuran-5-carbonitrile; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine | 2 | 197588242 | 197593598 | Rat | 89 | description | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1312776 | Lamtor5 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 | Predicted to contribute to guanyl-nucleotide exchange factor activity and molecular adaptor activity. Predicted to be involved in several processes, including positive regulation of interleukin-8 production; positive regulation of intracellular signal transduction; and positive regulation of protein localization to nucleus. Predicted to act upstream of or within positive regulation of NF-kappaB transcription factor activity. Predicted to be located in cytosol. Predicted to be part of FNIP-folliculin RagC/D GAP and Ragulator complex. Predicted to be active in lysosomal membrane. Is expressed in embryo. Orthologous to human LAMTOR5 (late endosomal/lysosomal adaptor, MAPK and MTOR activator 5). [provided by Alliance of Genome Resources, Apr 2025] | 3 | 107186174 | 107191398 | Mouse | 124 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 8799521 | Lamtor5 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of canonical NF-kappaB signal transd uction (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); glucose intolerance (ortholog); FOUND IN cytosol (ortholog); FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog) | NW_004955435 | 13896320 | 13900742 | Chinchilla | 33 | description | gene, protein-coding, MODEL [RefSeq] |
| 11967967 | LAMTOR5 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of gene expression (ortholog); positive regulation of interleukin-8 production (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); glucose intolerance (ortholog); FOUND IN cytosol (ortholog); FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog) | 1 | 113050671 | 113057368 | Bonobo | 37 | description | gene, protein-coding, MODEL [RefSeq] |
| 12541562 | Lamtor5 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of canonical NF-kappaB signal transd uction (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); glucose intolerance (ortholog); FOUND IN cytosol (ortholog); FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog) | NW_004936704 | 1830470 | 1835966 | Squirrel | 33 | description | gene, protein-coding, MODEL [RefSeq] |
| 18370805 | LAMTOR5 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of gene expression (ortholog); positive regulation of interleukin-8 production (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); glucose intolerance (ortholog); FOUND IN cytosol (ortholog); FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog) | | | | Green Monkey | 37 | description | gene, protein-coding, MODEL [RefSeq] |
| 18909172 | Lamtor5 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of gene expression (ortholog); positive regulation of interleukin-8 production (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); glucose intolerance (ortholog); FOUND IN cytosol (ortholog); FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog) | | | | Naked Mole-Rat | 37 | description | gene, protein-coding, MODEL [RefSeq] |
| 626057343 | Lamtor5 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 | ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of canonical NF-kappaB signal transd uction (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); glucose intolerance (ortholog); FOUND IN cytosol (ortholog); FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog) | | | | Black Rat | 33 | description | gene, protein-coding, MODEL [RefSeq] |
| 12252721 | LOC102156380 | ragulator complex protein LAMTOR5-like | ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of gene expression (ortholog); positive regulation of interleukin-8 production (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); glucose intolerance (ortholog); FOUND IN cytosol (ortholog); FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog) | 9 | 53420574 | 53421161 | Dog | 36 | description | gene, protein-coding, MODEL [RefSeq] |
| 1318580 | MTRR | 5-methyltetrahydrofolate-homocysteine methyltransferase reductase | This gene encodes a member of the ferredoxin-NADP(+) reductase (FNR) family of electron transferases. This protein functions in the synthesis of methionine by regenerating methionine synthase to a functional state. Because methionine synthesis requires methyl-gr oup transfer by a folate donor, activity of the encoded enzyme is important for folate metabolism and cellular methylation. Mutations in this gene can cause homocystinuria-megaloblastic anemia, cbl E type. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Dec 2015] | 5 | 7850859 | 7901113 | Human | 293 | description | gene, protein-coding, REVIEWED [RefSeq] |
| 1318581 | Mtrr | 5-methyltetrahydrofolate-homocysteine methyltransferase reductase | Methionine is an essential amino acid required for protein synthesis and one-carbon metabolism. Its synthesis is catalyzed by the enzyme methionine synthase. Methionine synthase eventually becomes inactive due to the oxidation of its cob(I)alamin cofactor. The protein encoded by this gene regenerate s a functional methionine synthase via reductive methylation. It is a member of the ferredoxin-NADP(+) reductase (FNR) family of electron transferases. Mutations in a similar gene in human have been associated with cblE complementation type homocystinuria-megaloblastic anemia and susceptibility to folate-sensitive neural tube defects. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, May 2015] | 13 | 68708897 | 68730273 | Mouse | 165 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 619804 | Rraga | Ras-related GTP binding A | ENCODES a protein that exhibits GTP binding; GTPase activity (ortholog); phosphoprotein binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to nutrient levels (ortholog); PARTICIPATES IN mTOR si gnaling pathway; FOUND IN cytoplasm (ortholog); FNIP-folliculin RagC/D GAP (ortholog); GATOR1 complex (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene; 3H-1,2-dithiole-3-thione | 5 | 106159335 | 106160930 | Rat | 174 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 1349440 | RRAGA | Ras related GTP binding A | Enables several functions, including GTP binding activity; protein dimerization activity; and ubiquitin protein ligase binding activity. Involved in several processes, including cellular response to amino acid starvation; positive regulation of TORC1 signaling; and tumor necrosis factor-mediated sig naling pathway. Located in GATOR1 complex; lysosome; and nucleoplasm. Part of FNIP-folliculin RagC/D GAP. Is active in lysosomal membrane. [provided by Alliance of Genome Resources, Jul 2025] | 9 | 19049427 | 19051025 | Human | 138 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 1550375 | Rraga | Ras-related GTP binding A | Enables GTP binding activity and GTPase activity. Involved in several processes, including glucose homeostasis; negative regulation of autophagy; and positive regulation of TOR signaling. Predicted to be located in cytoplasm and nucleoplasm. Predicted to be part of FN /span>IP-folliculin RagC/D GAP; GATOR1 complex; and Gtr1-Gtr2 GTPase complex. Predicted to be active in lysosomal membrane and nucleus. Is expressed in several structures, including central nervous system and retina. Orthologous to human RRAGA (Ras related GTP binding A). [provided by Alliance of Genome Resources, Jul 2025] | 4 | 86493910 | 86495522 | Mouse | 194 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 8822187 | Rraga | Ras related GTP binding A | ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); phosphoprotein binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to nutrient levels (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytoplasm (ortholog); FNIP-folliculin RagC/D GAP (ortholog); GATOR1 complex (ortholog) | NW_004955434 | 21509528 | 21510885 | Chinchilla | 50 | description | gene, protein-coding, MODEL [RefSeq] |
| 11755745 | RRAGA | Ras related GTP binding A | ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN cellular response to amino acid starvation (inferred); cellular response to amino acid stimulus (inferred); cellular response to nutrient levels (inferred); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytoplasm (inferred); ... (more) n style='font-weight:700;'>FNIP-folliculin RagC/D GAP (inferred); GATOR1 complex (inferred) | 9 | 18868781 | 18870356 | Bonobo | 69 | description | gene, protein-coding, MODEL [RefSeq] |
| 12291691 | RRAGA | Ras related GTP binding A | ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN cellular response to amino acid starvation (inferred); cellular response to amino acid stimulus (inferred); cellular response to nutrient levels (inferred); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytoplasm (inferred); ... (more) n style='font-weight:700;'>FNIP-folliculin RagC/D GAP (inferred); GATOR1 complex (inferred) | 11 | 38886990 | 38888634 | Dog | 66 | description | gene, protein-coding, MODEL [RefSeq] |
| 12645292 | Rraga | Ras related GTP binding A | ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); phosphoprotein binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to nutrient levels (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytoplasm (ortholog); FNIP-folliculin RagC/D GAP (ortholog); GATOR1 complex (ortholog) | NW_004936652 | 991832 | 993439 | Squirrel | 50 | description | gene, protein-coding, MODEL [RefSeq] |
| 14068803 | RRAGA | Ras related GTP binding A | ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN cellular response to amino acid starvation (inferred); cellular response to amino acid stimulus (inferred); cellular response to nutrient levels (inferred); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytoplasm (inferred); ... (more) n style='font-weight:700;'>FNIP-folliculin RagC/D GAP (inferred); GATOR1 complex (inferred) | | | | Pig | 67 | description | gene, protein-coding, MODEL [RefSeq] |
| 18531127 | RRAGA | Ras related GTP binding A | ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); phosphoprotein binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to nutrient levels (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytoplasm (ortholog); FNIP-folliculin RagC/D GAP (ortholog); GATOR1 complex (ortholog) | | | | Green Monkey | 50 | description | gene, protein-coding, MODEL [RefSeq] |
| 18904876 | Rraga | Ras related GTP binding A | ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN cellular response to amino acid starvation (inferred); cellular response to amino acid stimulus (inferred); cellular response to nutrient levels (inferred); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytoplasm (inferred); ... (more) n style='font-weight:700;'>FNIP-folliculin RagC/D GAP (inferred); GATOR1 complex (inferred) | | | | Naked Mole-Rat | 66 | description | gene, protein-coding, MODEL [RefSeq] |
| 626063762 | Rraga | Ras related GTP binding A | ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); phosphoprotein binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to nutrient levels (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytoplasm (ortholog); FNIP-folliculin RagC/D GAP (ortholog); GATOR1 complex (ortholog) | | | | Black Rat | 50 | description | gene, protein-coding, MODEL [RefSeq] |
| 1311760 | Rragc | Ras-related GTP binding C | ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICI PATES IN mTOR signaling pathway; ASSOCIATED WITH follicular lymphoma (ortholog); genetic disease (ortholog); LONG-OLSEN-DISTELMAIER SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); FNIP-folliculin RagC/D GAP (ortholog); Gtr1-Gtr2 GTPase complex (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; amitrole | 5 | 141433014 | 141452546 | Rat | 131 | description | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1323385 | Rragc | Ras-related GTP binding C | Predicted to enable several functions, including GTPase binding activity; guanyl ribonucleotide binding activity; and protein heterodimerization activity. Predicted to be involved in several processes, including cellular response to amino acid starvation; positive regulation of TORC1 signaling; and protein localization to lysosome. Predicted to be located in cytoplasm and nucleoplasm. Predicted to be part of FNIP-folliculin RagC/D GAP and Gtr1-Gtr2 GTPase complex. Predicted to be active in lysosomal membrane and nucleus. Orthologous to human RRAGC (Ras related GTP binding C). [provided by Alliance of Genome Resources, Apr 2025] | 4 | 123811226 | 123830790 | Mouse | 216 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 9037806 | Rragc | Ras related GTP binding C | ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICI PATES IN mTOR signaling pathway; ASSOCIATED WITH follicular lymphoma (ortholog); genetic disease (ortholog); LONG-OLSEN-DISTELMAIER SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); FNIP-folliculin RagC/D GAP (ortholog); Gtr1-Gtr2 GTPase complex (ortholog) | NW_004955452 | 16469426 | 16486336 | Chinchilla | 47 | description | gene, protein-coding, MODEL [RefSeq] |
| 11917922 | RRAGC | Ras related GTP binding C | ENCODES a protein that exhibits enzyme-substrate adaptor activity (inferred); GDP binding (inferred); GTP binding (inferred); INVOLVED IN cellular response to amino acid starvation (inferred); cellular response to amino acid stimulus (inferred); cellular response to nutrient levels (inferred); PARTI CIPATES IN mTOR signaling pathway; ASSOCIATED WITH follicular lymphoma (ortholog); genetic disease (ortholog); LONG-OLSEN-DISTELMAIER SYNDROME (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); FNIP-folliculin RagC/D GAP (inferred) | 1 | 38110578 | 38132179 | Bonobo | 76 | description | gene, protein-coding, MODEL [RefSeq] |
| 12353841 | RRAGC | Ras related GTP binding C | ENCODES a protein that exhibits enzyme-substrate adaptor activity (inferred); GDP binding (inferred); GTP binding (inferred); INVOLVED IN cellular response to amino acid starvation (inferred); cellular response to amino acid stimulus (inferred); cellular response to nutrient levels (inferred); PARTI CIPATES IN mTOR signaling pathway; ASSOCIATED WITH follicular lymphoma (ortholog); genetic disease (ortholog); LONG-OLSEN-DISTELMAIER SYNDROME (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); FNIP-folliculin RagC/D GAP (inferred) | 15 | 3875193 | 3892501 | Dog | 76 | description | gene, protein-coding, MODEL [RefSeq] |
| 14087169 | RRAGC | Ras related GTP binding C | ENCODES a protein that exhibits enzyme-substrate adaptor activity (inferred); GDP binding (inferred); GTP binding (inferred); INVOLVED IN cellular response to amino acid starvation (inferred); cellular response to amino acid stimulus (inferred); cellular response to nutrient levels (inferred); PARTI CIPATES IN mTOR signaling pathway; ASSOCIATED WITH follicular lymphoma (ortholog); genetic disease (ortholog); LONG-OLSEN-DISTELMAIER SYNDROME (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); FNIP-folliculin RagC/D GAP (inferred) | | | | Pig | 82 | description | gene, protein-coding, MODEL [RefSeq] |
| 18429684 | RRAGC | Ras related GTP binding C | ENCODES a protein that exhibits enzyme-substrate adaptor activity (inferred); GDP binding (inferred); GTP binding (inferred); INVOLVED IN cellular response to amino acid starvation (inferred); cellular response to amino acid stimulus (inferred); cellular response to nutrient levels (inferred); PARTI CIPATES IN mTOR signaling pathway; ASSOCIATED WITH follicular lymphoma (ortholog); genetic disease (ortholog); LONG-OLSEN-DISTELMAIER SYNDROME (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); FNIP-folliculin RagC/D GAP (inferred) | | | | Green Monkey | 76 | description | gene, protein-coding, MODEL [RefSeq] |
| 18935125 | Rragc | Ras related GTP binding C | ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); protein localization to lysosome (ortholog); protein localization to membrane (ortholog); PARTICIPATES IN mTOR sign aling pathway; ASSOCIATED WITH follicular lymphoma (ortholog); genetic disease (ortholog); LONG-OLSEN-DISTELMAIER SYNDROME (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog) | | | | Naked Mole-Rat | 62 | description | gene, protein-coding, MODEL [RefSeq] |
| 124917357 | Rragc | Ras related GTP binding C | ENCODES a protein that exhibits enzyme-substrate adaptor activity (inferred); GDP binding (inferred); GTP binding (inferred); INVOLVED IN cellular response to amino acid starvation (inferred); cellular response to amino acid stimulus (inferred); cellular response to nutrient levels (inferred); PARTI CIPATES IN mTOR signaling pathway; ASSOCIATED WITH follicular lymphoma (ortholog); genetic disease (ortholog); LONG-OLSEN-DISTELMAIER SYNDROME (ortholog); FOUND IN cytoplasm (inferred); cytosol (inferred); FNIP-folliculin RagC/D GAP (inferred) | | | | Squirrel | 76 | description | gene, protein-coding, MODEL [RefSeq] |
| 625996581 | Rragc | Ras related GTP binding C | ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICI PATES IN mTOR signaling pathway; ASSOCIATED WITH follicular lymphoma (ortholog); genetic disease (ortholog); LONG-OLSEN-DISTELMAIER SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); FNIP-folliculin RagC/D GAP (ortholog); Gtr1-Gtr2 GTPase complex (ortholog) | | | | Black Rat | 47 | description | gene, protein-coding, MODEL [RefSeq] |
| 1311881 | Slc38a9 | solute carrier family 38, member 9 | ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); arginine binding (ortholog); cholesterol binding (ortholog); INVOLVED IN amino acid transmembrane transport (ortholog); asparagine transport (ortholog); cellular response to amino acid stimulus (ortholog); ASSO CIATED WITH Liver Neoplasms (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosomal membrane (ortholog); INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil | 2 | 46024731 | 46102419 | Rat | 105 | description | gene, protein-coding, PROVISIONAL [RefSeq] |
| 1323568 | Slc38a9 | solute carrier family 38, member 9 | Predicted to enable several functions, including L-amino acid transmembrane transporter activity; arginine binding activity; and cholesterol binding activity. Predicted to be involved in carboxylic acid transport; cellular response to amino acid stimulus; and positive regulation of TORC1 signaling. Predicted to be located in late endosome and lysosome. Predicted to be part of FNIP-folliculin RagC/D GAP and Ragulator complex. Predicted to be active in lysosomal membrane. Orthologous to human SLC38A9 (solute carrier family 38 member 9). [provided by Alliance of Genome Resources, Jul 2025] | 13 | 112792723 | 112875286 | Mouse | 126 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 1604225 | SLC38A9 | solute carrier family 38 member 9 | Enables several functions, including L-amino acid transmembrane transporter activity; cholesterol binding activity; and guanyl-nucleotide exchange factor activity. Involved in carboxylic acid transport; cellular response to amino acid stimulus; and positive regulation of TORC1 signaling. Located in Ragulator complex; late endosome; and lysosomal membrane. Part of FNIP-folliculin RagC/D GAP. [provided by Alliance of Genome Resources, Jul 2025] | 5 | 55625845 | 55712335 | Human | 90 | description | gene, protein-coding, VALIDATED [RefSeq] |
| 8985544 | Slc38a9 | solute carrier family 38 member 9 | ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); cholesterol binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN amino acid transmembrane transport (ortholog); asparagine transport (ortholog); cellular response to amino acid stimulus (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) | NW_004955446 | 12042848 | 12132211 | Chinchilla | 29 | description | gene, protein-coding, MODEL [RefSeq] |
| 11741698 | SLC38A9 | solute carrier family 38 member 9 | ENCODES a protein that exhibits amino acid transmembrane transporter activity (inferred); cholesterol binding (inferred); guanyl-nucleotide exchange factor activity (inferred); INVOLVED IN amino acid transmembrane transport (inferred); amino acid transport (inferred); asparagine transport (inferred) ; ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (inferred); late endosome (inferred); late endosome membrane (inferred) | 5 | 58312101 | 58397365 | Bonobo | 38 | description | gene, protein-coding, MODEL [RefSeq] |
| 12403148 | SLC38A9 | solute carrier family 38 member 9 | ENCODES a protein that exhibits amino acid transmembrane transporter activity (inferred); cholesterol binding (inferred); guanyl-nucleotide exchange factor activity (inferred); INVOLVED IN amino acid transmembrane transport (inferred); amino acid transport (inferred); asparagine transport (inferred) ; ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (inferred); late endosome (inferred); late endosome membrane (inferred) | 2 | 42921906 | 43004265 | Dog | 36 | description | gene, protein-coding, MODEL [RefSeq] |
| 12581280 | Slc38a9 | solute carrier family 38 member 9 | ENCODES a protein that exhibits amino acid transmembrane transporter activity (inferred); cholesterol binding (inferred); guanyl-nucleotide exchange factor activity (inferred); INVOLVED IN amino acid transmembrane transport (inferred); amino acid transport (inferred); asparagine transport (inferred) ; ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (inferred); late endosome (inferred); late endosome membrane (inferred) | NW_004936480 | 12103697 | 12198592 | Squirrel | 37 | description | gene, protein-coding, MODEL [RefSeq] |
| 13979651 | SLC38A9 | solute carrier family 38 member 9 | ENCODES a protein that exhibits amino acid transmembrane transporter activity (inferred); cholesterol binding (inferred); guanyl-nucleotide exchange factor activity (inferred); INVOLVED IN amino acid transmembrane transport (inferred); amino acid transport (inferred); asparagine transport (inferred) ; ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (inferred); late endosome (inferred); late endosome membrane (inferred) | | | | Pig | 36 | description | gene, protein-coding, MODEL [RefSeq] |
| 18639839 | SLC38A9 | solute carrier family 38 member 9 | ENCODES a protein that exhibits amino acid transmembrane transporter activity (inferred); cholesterol binding (inferred); guanyl-nucleotide exchange factor activity (inferred); INVOLVED IN amino acid transmembrane transport (inferred); amino acid transport (inferred); asparagine transport (inferred) ; ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (inferred); late endosome (inferred); late endosome membrane (inferred) | | | | Green Monkey | 37 | description | gene, protein-coding, MODEL [RefSeq] |
| 18917319 | Slc38a9 | solute carrier family 38 member 9 | ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); cholesterol binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN asparagine transport (ortholog); cellular response to amino acid stimulus (ortholog); glutamine transport (orth olog); ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosome (ortholog) | | | | Naked Mole-Rat | 35 | description | gene, protein-coding, MODEL [RefSeq] |
| 625890357 | Slc38a9 | solute carrier family 38 member 9 | ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); cholesterol binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN amino acid transmembrane transport (ortholog); asparagine transport (ortholog); cellular response to amino acid stimulus (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) | | | | Black Rat | 29 | description | gene, protein-coding, MODEL [RefSeq] |
| 1350160 | TNFSF12 | TNF superfamily member 12 | The protein encoded by this gene is a cytokine that belongs to the tumor necrosis factor (TNF) ligand family. This protein is a ligand for the FN14/TWEAKR receptor. This cytokine has overlapping signaling functions with TNF, but displays a much wider tissue dist ribution. This cytokine, which exists in both membrane-bound and secreted forms, can induce apoptosis via multiple pathways of cell death in a cell type-specific manner. This cytokine is also found to promote proliferation and migration of endothelial cells, and thus acts as a regulator of angiogenesis. Alternative splicing results in multiple transcript variants. Some transcripts skip the last exon of this gene and continue into the second exon of the neighboring TNFSF13 gene; such read-through transcripts are contained in GeneID 407977, TNFSF12-TNFSF13. [provided by RefSeq, Oct 2010] | 17 | 7549058 | 7557881 | Human | 141 | description | gene, protein-coding, REVIEWED [RefSeq] |