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Gene: Ddb1 (damage-specific DNA binding protein 1) Rattus norvegicus
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Symbol: Ddb1
Name: damage-specific DNA binding protein 1
Description: Exhibits damaged DNA binding activity. Predicted to be involved in several processes, including cellular protein metabolic process; positive regulation of gluconeogenesis; and positive regulation of viral process. Predicted to localize to the Cul4-RING E3 ubiquitin ligase complex; cytoplasm; and nucleoplasm. Orthologous to human DDB1 (damage specific DNA binding protein 1); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ubiquitin/proteasome degradation pathway; INTERACTS WITH 1,3-dinitrobenzene; 2,6-dinitrotoluene; ammonium chloride.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: damage specific DNA binding protein 1; damage-specific DNA binding protein 1, 127kDa; damage-specific DNA-binding protein 1; DNA damage-binding protein 1; LOC361731
Orthologs:
Homo sapiens (human) : DDB1 (damage specific DNA binding protein 1)  HGNC  Alliance
Mus musculus (house mouse) : Ddb1 (damage specific DNA binding protein 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ddb1 (damage specific DNA binding protein 1)
Pan paniscus (bonobo/pygmy chimpanzee) : DDB1 (damage specific DNA binding protein 1)
Canis lupus familiaris (dog) : DDB1 (damage specific DNA binding protein 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ddb1 (damage specific DNA binding protein 1)
Sus scrofa (pig) : DDB1 (damage specific DNA binding protein 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01226,657,561 - 226,683,356 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1226,657,561 - 226,683,347 (+)Ensembl
Rnor_5.01233,603,490 - 233,629,285 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41213,095,187 - 213,120,986 (+)NCBIRGSC3.4rn4RGSC3.4
Celera1204,746,264 - 204,772,059 (+)NCBICelera
Cytogenetic Map1q43NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Ddb1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 621889
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.