Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Atp5mc3 (ATP synthase membrane subunit c locus 3) Rattus norvegicus
Analyze
Symbol: Atp5mc3
Name: ATP synthase membrane subunit c locus 3
RGD ID: 620052
Description: Exhibits ligand-gated channel activity. Involved in several processes, including pore complex assembly; response to (R)-carnitine; and response to muscle stretch. Localizes to cation channel complex. Orthologous to human ATP5MC3 (ATP synthase membrane subunit c locus 3); PARTICIPATES IN Alzheimer's disease pathway; Huntington's disease pathway; oxidative phosphorylation pathway; INTERACTS WITH 2,6-dinitrotoluene; benzo[a]pyrene; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: ATP synthase F(0) complex subunit C3, mitochondrial; ATP synthase lipid-binding protein; ATP synthase lipid-binding protein, mitochondrial; ATP synthase proteolipid P3; ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9); ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c (subunit 9) isoform 3; ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c, isoform 3; ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9); ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9); Atp5g3; ATPase protein 9; ATPase subunit c
Orthologs:
Homo sapiens (human) : ATP5MC3 (ATP synthase membrane subunit c locus 3)  HGNC  Alliance
Mus musculus (house mouse) : Atp5g3 (ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9))  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Atp5mc3 (ATP synthase membrane subunit c locus 3)
Pan paniscus (bonobo/pygmy chimpanzee) : ATP5MC3 (ATP synthase membrane subunit c locus 3)
Canis lupus familiaris (dog) : ATP5MC3 (ATP synthase membrane subunit c locus 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Atp5mc3 (ATP synthase membrane subunit c locus 3)
Sus scrofa (pig) : ATP5MC3 (ATP synthase membrane subunit c locus 3)
Chlorocebus sabaeus (African green monkey) : ATP5MC3 (ATP synthase membrane subunit c locus 3)
Heterocephalus glaber (naked mole-rat) : Atp5mc3 (ATP synthase membrane subunit c locus 3)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0360,811,218 - 60,813,903 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl360,811,210 - 60,813,869 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0367,289,961 - 67,292,646 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4356,511,747 - 56,514,204 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1879,924,847 - 79,924,970 (+)NCBI
Celera358,337,134 - 58,339,819 (-)NCBICelera
Cytogenetic Map3q23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
RGD Curation Notes
 
More on Atp5mc3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 620052
Created: 2002-08-06
Species: Rattus norvegicus
Last Modified: 2020-10-06
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.