RRAGC (Ras related GTP binding C) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: RRAGC (Ras related GTP binding C) Sus scrofa
Analyze
Symbol: RRAGC
Name: Ras related GTP binding C
RGD ID: 14087169
Description: ENCODES a protein that exhibits enzyme-substrate adaptor activity (inferred); GDP binding (inferred); GTP binding (inferred); INVOLVED IN cellular response to amino acid starvation (inferred); cellular response to amino acid stimulus (inferred); cellular response to nutrient levels (inferred); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease dominant intermediate C (ortholog); follicular lymphoma (ortholog); genetic disease (ortholog); FOUND IN lysosomal membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ras-related GTP-binding protein C
RGD Orthologs
Human
Alliance Genes
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl694,785,910 - 94,802,988 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1694,785,906 - 94,803,017 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2687,834,978 - 87,852,095 (-)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:14681463   PMID:17145712   PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
RRAGC
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl694,785,910 - 94,802,988 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1694,785,906 - 94,803,017 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2687,834,978 - 87,852,095 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RRAGC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38138,838,198 - 38,859,772 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl138,838,198 - 38,859,772 (-)EnsemblGRCh38hg38GRCh38
GRCh37139,303,870 - 39,325,444 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36139,077,592 - 39,097,927 (-)NCBINCBI36Build 36hg18NCBI36
Build 34138,974,113 - 38,994,433NCBI
Celera137,583,632 - 37,603,970 (-)NCBICelera
Cytogenetic Map1p34.3NCBI
HuRef137,422,097 - 37,443,680 (-)NCBIHuRef
CHM1_1139,419,225 - 39,440,860 (-)NCBICHM1_1
T2T-CHM13v2.0138,705,423 - 38,727,008 (-)NCBIT2T-CHM13v2.0

Variants

.
Variants in RRAGC
289 total Variants

Expression


Sequence


RefSeq Acc Id: ENSSSCT00000004044   ⟹   ENSSSCP00000003953
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl694,785,910 - 94,814,537 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000004045   ⟹   ENSSSCP00000003954
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl694,805,643 - 94,814,337 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000049551   ⟹   ENSSSCP00000047025
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl694,785,910 - 94,802,988 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000070898   ⟹   ENSSSCP00000070378
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl694,809,108 - 94,814,337 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000072710   ⟹   ENSSSCP00000068388
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl694,785,910 - 94,814,332 (-)Ensembl
RefSeq Acc Id: ENSSSCT00000090565   ⟹   ENSSSCP00000060959
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl694,807,133 - 94,814,295 (-)Ensembl
RefSeq Acc Id: XM_003127801   ⟹   XP_003127849
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1694,785,906 - 94,803,017 (-)NCBI
Sequence:
RefSeq Acc Id: XP_003127849   ⟸   XM_003127801
- UniProtKB: A0A287ASH4 (UniProtKB/TrEMBL),   A0A480LYP4 (UniProtKB/TrEMBL),   A0A8D1DFJ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000047025   ⟸   ENSSSCT00000049551
RefSeq Acc Id: ENSSSCP00000060959   ⟸   ENSSSCT00000090565
RefSeq Acc Id: ENSSSCP00000070378   ⟸   ENSSSCT00000070898
RefSeq Acc Id: ENSSSCP00000003954   ⟸   ENSSSCT00000004045
RefSeq Acc Id: ENSSSCP00000003953   ⟸   ENSSSCT00000004044
RefSeq Acc Id: ENSSSCP00000068388   ⟸   ENSSSCT00000072710


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000003648 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00015052950 UniProtKB/TrEMBL
  ENSSSCG00025031833 UniProtKB/TrEMBL
  ENSSSCG00030036445 UniProtKB/TrEMBL
  ENSSSCG00035025277 UniProtKB/TrEMBL
  ENSSSCG00040011600 UniProtKB/TrEMBL
  ENSSSCG00045003651 UniProtKB/TrEMBL
  ENSSSCG00050055933 UniProtKB/TrEMBL
  ENSSSCG00055005717 UniProtKB/TrEMBL
  ENSSSCG00060063544 UniProtKB/TrEMBL
  ENSSSCG00065002900 UniProtKB/TrEMBL
  ENSSSCG00070027008 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000049551 ENTREZGENE
  ENSSSCT00000049551.2 UniProtKB/TrEMBL
  ENSSSCT00015070933.1 UniProtKB/TrEMBL
  ENSSSCT00015071024.1 UniProtKB/TrEMBL
  ENSSSCT00025043491.1 UniProtKB/TrEMBL
  ENSSSCT00025043708.1 UniProtKB/TrEMBL
  ENSSSCT00030050742.1 UniProtKB/TrEMBL
  ENSSSCT00030050816.1 UniProtKB/TrEMBL
  ENSSSCT00035033277.1 UniProtKB/TrEMBL
  ENSSSCT00035033289.1 UniProtKB/TrEMBL
  ENSSSCT00040015246.1 UniProtKB/TrEMBL
  ENSSSCT00040015326.1 UniProtKB/TrEMBL
  ENSSSCT00040015348.1 UniProtKB/TrEMBL
  ENSSSCT00040015419.1 UniProtKB/TrEMBL
  ENSSSCT00045006038.1 UniProtKB/TrEMBL
  ENSSSCT00045006068.1 UniProtKB/TrEMBL
  ENSSSCT00050076292.1 UniProtKB/TrEMBL
  ENSSSCT00050076319.1 UniProtKB/TrEMBL
  ENSSSCT00050076339.1 UniProtKB/TrEMBL
  ENSSSCT00055011192.1 UniProtKB/TrEMBL
  ENSSSCT00055011267.1 UniProtKB/TrEMBL
  ENSSSCT00055011291.1 UniProtKB/TrEMBL
  ENSSSCT00055011377.1 UniProtKB/TrEMBL
  ENSSSCT00060086747.1 UniProtKB/TrEMBL
  ENSSSCT00060086861.1 UniProtKB/TrEMBL
  ENSSSCT00065003767.1 UniProtKB/TrEMBL
  ENSSSCT00065003792.1 UniProtKB/TrEMBL
  ENSSSCT00070054149.1 UniProtKB/TrEMBL
  ENSSSCT00070054150.1 UniProtKB/TrEMBL
  ENSSSCT00070054151.1 UniProtKB/TrEMBL
  ENSSSCT00070054161.1 UniProtKB/TrEMBL
  ENSSSCT00070054164.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.450.190 UniProtKB/TrEMBL
  3.40.50.300 UniProtKB/TrEMBL
  6.10.250.1060 UniProtKB/TrEMBL
InterPro AMY1 UniProtKB/TrEMBL
  Gtr1_RagA UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
  RagC/D UniProtKB/TrEMBL
KEGG Report ssc:100513798 UniProtKB/TrEMBL
NCBI Gene RRAGC ENTREZGENE
PANTHER C-MYC-BINDING PROTEIN UniProtKB/TrEMBL
  PTHR11259 UniProtKB/TrEMBL
  PTHR13168 UniProtKB/TrEMBL
  RAS-RELATED GTP-BINDING PROTEIN C UniProtKB/TrEMBL
Pfam Gtr1_RagA UniProtKB/TrEMBL
PRINTS CMYCBINDINGP UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/TrEMBL
UniProt A0A287ASH4 ENTREZGENE, UniProtKB/TrEMBL
  A0A480LYP4 ENTREZGENE, UniProtKB/TrEMBL
  A0A4X1VQQ7_PIG UniProtKB/TrEMBL
  A0A4X1VQS2_PIG UniProtKB/TrEMBL
  A0A4X1VVK4_PIG UniProtKB/TrEMBL
  A0A4X1VVL1_PIG UniProtKB/TrEMBL
  A0A4X1VWA8_PIG UniProtKB/TrEMBL
  A0A8D1DFJ0 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:110395 ENTREZGENE