Fut8 (fucosyltransferase 8) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Fut8 (fucosyltransferase 8) Rattus norvegicus
Analyze
Symbol: Fut8
Name: fucosyltransferase 8
RGD ID: 1303096
Description: Predicted to enable glycoprotein 6-alpha-L-fucosyltransferase activity. Predicted to be involved in GDP-L-fucose metabolic process; N-glycan fucosylation; and protein N-linked glycosylation via asparagine. Predicted to act upstream of or within several processes, including cell surface receptor signaling pathway; fibroblast migration; and regulation of cellular response to oxidative stress. Predicted to be located in Golgi cisterna membrane. Orthologous to human FUT8 (fucosyltransferase 8); PARTICIPATES IN keratan sulfate biosynthetic pathway; N-linked glycan biosynthetic pathway; INTERACTS WITH 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: alpha-(1,6)-fucosyltransferase; alpha1-6FucT; fucosyltransferase 8 (alpha (1,6) fucosyltransferase); GDP-fucose--glycoprotein fucosyltransferase; GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha1,6-fucosyltransferase; glycoprotein 6-alpha-L-fucosyltransferase
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86101,682,354 - 101,909,784 (+)NCBIGRCr8
mRatBN7.2695,949,246 - 96,176,677 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl695,949,991 - 96,176,677 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx696,431,422 - 96,589,699 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0696,729,964 - 96,888,239 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0696,162,558 - 96,299,949 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06100,305,957 - 100,537,208 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6100,337,226 - 100,537,224 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06109,782,471 - 109,861,661 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.06109,896,811 - 109,922,225 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4699,871,195 - 100,010,833 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1699,874,650 - 100,014,289 (+)NCBI
Celera694,453,397 - 94,591,184 (+)NCBICelera
Cytogenetic Map6q24NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (ISO)
1,2-dimethylhydrazine  (ISO)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-diaminotoluene  (ISO)
2,4-dinitrotoluene  (EXP)
3-chloropropane-1,2-diol  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
3-methylcholanthrene  (ISO)
4,4'-sulfonyldiphenol  (ISO)
acetamide  (EXP)
afimoxifene  (ISO)
all-trans-retinoic acid  (ISO)
aristolochic acid A  (ISO)
Aroclor 1254  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bis(2-chloroethyl) sulfide  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (ISO)
caffeine  (ISO)
calcitriol  (ISO)
carmustine  (ISO)
chlordecone  (ISO)
choline  (ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
cocaine  (EXP)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
dexamethasone  (ISO)
diarsenic trioxide  (ISO)
dibenzo[a,l]pyrene  (ISO)
diethyl pyrocarbonate  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (EXP)
etoposide  (ISO)
folic acid  (ISO)
fucose  (ISO)
fulvestrant  (ISO)
GDP  (ISO)
gentamycin  (EXP)
glafenine  (EXP)
glyphosate  (EXP)
GTP  (ISO)
guanosine 5'-monophosphate  (ISO)
indometacin  (ISO)
iodomethane  (ISO)
isotretinoin  (ISO)
L-methionine  (ISO)
menadione  (ISO)
methoxychlor  (EXP)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
N-nitrosodiethylamine  (ISO)
nickel dichloride  (ISO)
oxaliplatin  (EXP)
p-chloromercuribenzoic acid  (ISO)
paracetamol  (EXP)
PCB138  (EXP)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (ISO)
Phenylglyoxal  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (ISO)
piroxicam  (ISO)
potassium chromate  (ISO)
pyridoxal 5'-phosphate  (ISO)
quercetin  (ISO)
rotenone  (EXP)
SB 431542  (ISO)
sodium arsenite  (ISO)
tamoxifen  (ISO)
temozolomide  (ISO)
thioacetamide  (EXP)
topotecan  (EXP)
trichloroethene  (EXP)
trichostatin A  (ISO)
triptonide  (ISO)
trovafloxacin  (ISO)
uranium atom  (ISO)
valproic acid  (ISO)
vinclozolin  (EXP)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
5. GOA pipeline RGD automated data pipeline
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Information Derived from GenBank Report RGD, Sept. 2003
Additional References at PubMed
PMID:10902914   PMID:16236725   PMID:17043354   PMID:17172260   PMID:19199708   PMID:19946888   PMID:21208406   PMID:24619415  


Genomics

Comparative Map Data
Fut8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr86101,682,354 - 101,909,784 (+)NCBIGRCr8
mRatBN7.2695,949,246 - 96,176,677 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl695,949,991 - 96,176,677 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx696,431,422 - 96,589,699 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0696,729,964 - 96,888,239 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0696,162,558 - 96,299,949 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.06100,305,957 - 100,537,208 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl6100,337,226 - 100,537,224 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06109,782,471 - 109,861,661 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.06109,896,811 - 109,922,225 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4699,871,195 - 100,010,833 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1699,874,650 - 100,014,289 (+)NCBI
Celera694,453,397 - 94,591,184 (+)NCBICelera
Cytogenetic Map6q24NCBI
FUT8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381465,356,842 - 65,744,121 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1465,410,592 - 65,744,121 (+)EnsemblGRCh38hg38GRCh38
GRCh371465,877,310 - 66,210,839 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361464,947,593 - 65,279,715 (+)NCBINCBI36Build 36hg18NCBI36
Build 341465,205,885 - 65,279,714NCBI
Celera1445,932,950 - 46,265,003 (+)NCBICelera
Cytogenetic Map14q23.3NCBI
HuRef1446,045,683 - 46,380,271 (+)NCBIHuRef
CHM1_11465,815,455 - 66,148,980 (+)NCBICHM1_1
T2T-CHM13v2.01459,615,360 - 59,948,716 (+)NCBIT2T-CHM13v2.0
Fut8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391277,284,878 - 77,522,770 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1277,284,899 - 77,523,112 (+)EnsemblGRCm39 Ensembl
GRCm381277,237,430 - 77,475,998 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1277,238,125 - 77,476,338 (+)EnsemblGRCm38mm10GRCm38
MGSCv371278,340,008 - 78,576,974 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361278,157,861 - 78,394,827 (+)NCBIMGSCv36mm8
Celera1278,319,280 - 78,556,375 (+)NCBICelera
Cytogenetic Map12C3NCBI
cM Map1235.46NCBI
Fut8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554664,246,336 - 4,399,751 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554664,248,414 - 4,481,942 (-)NCBIChiLan1.0ChiLan1.0
FUT8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21566,445,179 - 66,840,607 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11465,730,043 - 66,058,095 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01445,983,149 - 46,310,318 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11464,867,169 - 65,193,117 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1465,016,869 - 65,193,111 (+)Ensemblpanpan1.1panPan2
FUT8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1839,670,629 - 39,972,729 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl839,825,246 - 39,972,612 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha839,517,785 - 39,663,663 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0839,894,253 - 40,195,165 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl839,895,335 - 40,194,870 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1839,668,378 - 39,816,282 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0839,740,833 - 39,888,597 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0840,099,999 - 40,247,661 (+)NCBIUU_Cfam_GSD_1.0
Fut8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864064,850,261 - 65,179,285 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364959,115,938 - 9,344,068 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364959,012,425 - 9,341,538 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FUT8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl789,519,730 - 89,680,489 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1789,395,637 - 89,680,502 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2795,815,278 - 96,101,019 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FUT8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12442,627,340 - 42,965,505 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2442,788,132 - 42,968,124 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605330,814,869 - 31,156,411 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fut8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473435,264,019 - 35,458,277 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473435,257,666 - 35,617,275 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Fut8
1287 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:36
Count of miRNA genes:31
Interacting mature miRNAs:35
Transcripts:ENSRNOT00000011220
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)645790088104200226Rat
6893332Cm74Cardiac mass QTL 740.40.64heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)657730540104085867Rat
1558641Cm47Cardiac mass QTL 472.90.001heart mass (VT:0007028)heart wet weight (CMO:0000069)657730540104085867Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)658632962103632962Rat
12801471Schws9Schwannoma susceptibility QTL 9nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)661747639106747639Rat
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
1641904Alcrsp4Alcohol response QTL 4response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)667262953112262953Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)671201409116201409Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)672202632115200186Rat
70196BpQTLcluster7Blood pressure QTL cluster 76.82arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)672202632117202632Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)672202632130729475Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
1581550Pur8Proteinuria QTL 8urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)672227641130729205Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)673463459109394713Rat
2293837Kiddil1Kidney dilation QTL 13.7kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)681132889104393926Rat
2293842Kiddil3Kidney dilation QTL 34.3kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)681132889104393926Rat
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)682523650110548006Rat
1576302Schws4Schwannoma susceptibility QTL 40.0078nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)683190345106747639Rat
738034Anxrr5Anxiety related response QTL 55.9exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)684130881129130881Rat
10054138Gmadr3Adrenal mass QTL 33.680.00045adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)685140138130140138Rat
10054123Srcrt6Stress Responsive Cort QTL 62.50.0043blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)685140138130140138Rat
724513Uae14Urinary albumin excretion QTL 146.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)685311061133478515Rat
1300076Glom8Glomerulus QTL 870.000000009kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)686894788131894788Rat
2303624Vencon5Ventilatory control QTL 54.45respiration trait (VT:0001943)minute ventilation (CMO:0000132)688047916133047916Rat
1331722Thshl1Thyroid stimulating hormone level QTL 111.70.0001blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)689762877106752806Rat
1331725Bp212Blood pressure QTL 2123.52475arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)693701310128713626Rat
61414Pia3Pristane induced arthritis QTL 34.5joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)694968928137848904Rat
12801411Schws8Schwannoma susceptibility QTL 8nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)694968928139968928Rat

Markers in Region
RH127620  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2696,176,270 - 96,176,484 (+)MAPPERmRatBN7.2
Rnor_6.06100,536,802 - 100,537,015NCBIRnor6.0
Rnor_5.06109,922,490 - 109,922,703UniSTSRnor5.0
RGSC_v3.46100,011,098 - 100,011,311UniSTSRGSC3.4
Celera694,591,449 - 94,591,662UniSTS
RH 3.4 Map6680.9UniSTS
Cytogenetic Map6q24UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 34 39 23 19 23 3 4 74 35 36 11 3
Low 9 18 18 18 5 7 5 5
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001002289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001412189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594263 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039112660 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063262247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AJ781406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FN668936 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FN668937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FN668938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FN668939 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FN668940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ227928 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ231659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GM744703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000011220   ⟹   ENSRNOP00000011220
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl695,949,991 - 96,176,671 (+)Ensembl
Rnor_6.0 Ensembl6100,337,226 - 100,537,224 (+)Ensembl
RefSeq Acc Id: ENSRNOT00000096219   ⟹   ENSRNOP00000089026
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl696,043,141 - 96,176,677 (+)Ensembl
RefSeq Acc Id: NM_001002289   ⟹   NP_001002289
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86101,682,354 - 101,909,784 (+)NCBI
mRatBN7.2695,949,246 - 96,176,677 (+)NCBI
Rnor_6.06100,397,053 - 100,536,537 (+)NCBI
Rnor_5.06109,782,471 - 109,861,661 (+)NCBI
Rnor_5.06109,896,811 - 109,922,225 (+)NCBI
RGSC_v3.4699,871,195 - 100,010,833 (+)RGD
Celera694,453,397 - 94,591,184 (+)RGD
Sequence:
RefSeq Acc Id: NM_001412189   ⟹   NP_001399118
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86101,683,288 - 101,909,784 (+)NCBI
mRatBN7.2695,950,180 - 96,176,677 (+)NCBI
RefSeq Acc Id: XM_039112660   ⟹   XP_038968588
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86101,683,339 - 101,909,784 (+)NCBI
mRatBN7.2695,950,236 - 96,176,677 (+)NCBI
RefSeq Acc Id: XM_063262247   ⟹   XP_063118317
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr86101,683,771 - 101,909,784 (+)NCBI
RefSeq Acc Id: NP_001002289   ⟸   NM_001002289
- UniProtKB: Q6EV76 (UniProtKB/Swiss-Prot),   D4IGX4 (UniProtKB/TrEMBL),   A6HCC9 (UniProtKB/TrEMBL),   D4IGX5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000011220   ⟸   ENSRNOT00000011220
RefSeq Acc Id: XP_038968588   ⟸   XM_039112660
- Peptide Label: isoform X2
- UniProtKB: Q6EV76 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: ENSRNOP00000089026   ⟸   ENSRNOT00000096219
RefSeq Acc Id: NP_001399118   ⟸   NM_001412189
- UniProtKB: Q6EV76 (UniProtKB/Swiss-Prot),   D4IGX4 (UniProtKB/TrEMBL),   A6HCC9 (UniProtKB/TrEMBL),   D4IGX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063118317   ⟸   XM_063262247
- Peptide Label: isoform X1
Protein Domains
GT23   SH3

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6EV76-F1-model_v2 AlphaFold Q6EV76 1-575 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:1303096 AgrOrtholog
BioCyc Gene G2FUF-37034 BioCyc
BioCyc Pathway PWY-7426 [complex N-linked glycan biosynthesis (vertebrates)] BioCyc
BioCyc Pathway Image PWY-7426 BioCyc
Ensembl Genes ENSRNOG00000008451 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000011220 ENTREZGENE
  ENSRNOT00000011220.5 UniProtKB/TrEMBL
  ENSRNOT00000096219 ENTREZGENE
  ENSRNOT00000096219.1 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.11350 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ESAT-6-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 Domains UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Fut8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Fut8_N_cat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Fut8_SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GT23_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report rno:432392 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 432392 ENTREZGENE
PANTHER ALPHA- 1,6 -FUCOSYLTRANSFERASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ALPHA-(1,6)-FUCOSYLTRANSFERASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam FUT8_N_cat UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_9 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Fut8 PhenoGen
PIRSF Alpha1_6FUT_euk UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE GT23 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
RatGTEx ENSRNOG00000008451 RatGTEx
SMART SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50044 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A8I6AAW5_RAT UniProtKB/TrEMBL
  A6HCC9 ENTREZGENE
  D4IGX4 ENTREZGENE, UniProtKB/TrEMBL
  D4IGX5 ENTREZGENE, UniProtKB/TrEMBL
  FUT8_RAT UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary A6HCC9 UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-04-13 Fut8  fucosyltransferase 8  Fut8  fucosyltransferase 8 (alpha (1,6) fucosyltransferase)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-18 Fut8  fucosyltransferase 8 (alpha (1,6) fucosyltransferase)  Fut8  fucosyltransferase 8  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-03-04 Fut8  fucosyltransferase 8  Fut8  fucosyltransferase 8 (alpha (1,6) fucosyltransferase)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2005-02-14 Fut8  fucosyltransferase 8 (alpha (1,6) fucosyltransferase)      Symbol and Name status set to provisional 70820 PROVISIONAL