Gene: Agfg1 (ArfGAP with FG repeats 1) Rattus norvegicus
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Symbol: Agfg1
Name: ArfGAP with FG repeats 1
Description: ENCODES a protein that exhibits DNA binding (inferred); GTPase activator activity (inferred); metal ion binding (inferred); INVOLVED IN acrosome assembly (ortholog); intermediate filament organization (ortholog); spermatid nucleus differentiation (ortholog); PARTICIPATES IN influenza A pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); male infertility (ortholog); FOUND IN cell projection (ortholog); cytoplasmic vesicle (ortholog); intracellular membrane-bounded organelle (ortholog); INTERACTS WITH (S)-10-[(DIMETHYLAMINO)METHYL]-4-ETHYL-4,9-DIHYDROXY-1H-PYRANO[3',4':6,7]INOLIZINO[1,2-B]-QUINOLINE-3,14(4H,12H)-DIONE; 3,3',5,5'-tetrabromobisphenol A; 4,4'-diaminodiphenylmethane
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: arf-GAP domain and FG repeat-containing protein 1; arf-GAP domain and FG repeats-containing protein 1; HIV-1 Rev-binding protein homolog; LOC363266; MGC116375; nucleoporin-like protein RIP; similar to HIV-1 Rev binding protein
Orthologs:
Homo sapiens (human) : AGFG1 (ArfGAP with FG repeats 1)  HGNC  Alliance
Mus musculus (house mouse) : Agfg1 (ArfGAP with FG repeats 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Agfg1 (ArfGAP with FG repeats 1)
Pan paniscus (bonobo/pygmy chimpanzee) : AGFG1 (ArfGAP with FG repeats 1)
Canis lupus familiaris (dog) : AGFG1 (ArfGAP with FG repeats 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Agfg1 (ArfGAP with FG repeats 1)
more info ...
Related Pseudogenes: Agfg1-ps1  
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0988,607,508 - 88,663,486 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0988,354,885 - 88,410,590 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4982,162,480 - 82,216,301 (+)NCBIRGSC3.4rn4RGSC3.4
Celera981,565,840 - 81,618,403 (+)NCBICelera
Cytogenetic Map9q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Agfg1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1560041
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2018-08-08
Status: ACTIVE