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ONTOLOGY REPORT - ANNOTATIONS

Term:innate immune response
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Accession:GO:0045087 term browser browse the term
Definition:Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.
Synonyms:exact_synonym: innate immunity;   nonspecific immune response
 alt_id: GO:0002226
 xref: Wikipedia:Innate_immune_system
 never_in_taxon: NCBITaxon:2 ! Fungi or Bacteria or Archaea;   NCBITaxon:2157 ! Fungi or Bacteria or Archaea;   NCBITaxon:4751 ! Fungi or Bacteria or Archaea

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innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam15 ADAM metallopeptidase domain 15 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624885:2,441,298...2,451,061
Ensembl chrNW_004624885:2,441,217...2,451,057 		JBrowse link
G Alpk1 alpha kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624838:6,273,398...6,288,363
Ensembl chrNW_004624838:6,229,899...6,287,920 		JBrowse link
G Ankrd17 ankyrin repeat domain 17 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624735:34,337,722...34,516,891
Ensembl chrNW_004624735:34,337,835...34,519,559 		JBrowse link
G Apcs amyloid P component, serum involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624794:1,689,619...1,690,700
Ensembl chrNW_004624794:1,689,774...1,691,362 		JBrowse link
G App amyloid beta precursor protein involved_in ISO PMID:20209079
(PMID:20209079)		 UniProt PMID:20209079 RGD:10400853 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372 		JBrowse link
G Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624885:1,314,885...1,362,730
Ensembl chrNW_004624885:1,311,512...1,362,730 		JBrowse link
G Atg14 autophagy related 14 acts_upstream_of_or_within ISO (PMID:26764600) MGI PMID:26764600 NCBI chrNW_004624884:165,443...220,525 JBrowse link
G Atg5 autophagy related 5 acts_upstream_of_or_within ISO (PMID:26764600) MGI PMID:26764600 NCBI chrNW_004624780:15,987,483...16,124,158
Ensembl chrNW_004624780:15,987,397...16,124,151 		JBrowse link
G Atg7 autophagy related 7 acts_upstream_of_or_within ISO (PMID:26764600) MGI PMID:26764600 NCBI chrNW_004624943:231,978...480,933
Ensembl chrNW_004624943:232,618...481,290 		JBrowse link
G Atg9a autophagy related 9A acts_upstream_of_or_within ISO (PMID:19926846) MGI PMID:19926846 NCBI chrNW_004624823:5,787,525...5,797,536
Ensembl chrNW_004624823:5,787,601...5,797,534 		JBrowse link
G B2m beta-2-microglobulin involved_in ISO (PMID:23144825) UniProt PMID:23144825 NCBI chrNW_004624804:11,514,728...11,521,625 JBrowse link
G Bcl10 BCL10 immune signaling adaptor involved_in ISO (PMID:16831874) UniProt PMID:16831874 NCBI chrNW_004624742:12,210,333...12,222,533
Ensembl chrNW_004624742:12,210,360...12,221,759 		JBrowse link
G Blk BLK proto-oncogene, Src family tyrosine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624758:25,129,922...25,180,180
Ensembl chrNW_004624758:25,129,853...25,181,761 		JBrowse link
G Bpi bactericidal permeability increasing protein involved_in IEA TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624842:1,339,309...1,363,265
Ensembl chrNW_004624842:1,339,603...1,360,097 		JBrowse link
G Bpifa1 BPI fold containing family A member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624842:6,024,460...6,031,718 JBrowse link
G Bpifc BPI fold containing family C involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004624750:1,997,493...2,043,910
Ensembl chrNW_004624750:2,012,784...2,043,932 		JBrowse link
G Bst2 bone marrow stromal cell antigen 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624908:588,925...591,033 JBrowse link
G C1r complement C1r involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624860:3,675,926...3,684,598
Ensembl chrNW_004624860:3,676,252...3,684,406 		JBrowse link
G C2 complement C2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624754:24,316,778...24,327,065
Ensembl chrNW_004624754:24,317,058...24,322,656 		JBrowse link
G C3 complement C3 involved_in ISO (PMID:16034134) AgBase PMID:16034134 NCBI chrNW_004624828:3,773,816...3,798,077
Ensembl chrNW_004624828:3,770,221...3,797,946 		JBrowse link
G C6 complement C6 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624759:13,775,339...13,842,415
Ensembl chrNW_004624759:13,775,358...13,842,648 		JBrowse link
G C7 complement C7 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624759:13,991,104...14,114,271
Ensembl chrNW_004624759:13,992,681...14,114,411 		JBrowse link
G C8b complement C8 beta chain involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624862:3,187,573...3,224,895
Ensembl chrNW_004624862:3,187,120...3,225,751 		JBrowse link
G C9 complement C9 involved_in ISO (PMID:16034134) AgBase PMID:16034134 NCBI chrNW_004624759:15,534,743...15,623,767
Ensembl chrNW_004624759:15,534,660...15,624,381 		JBrowse link
G Calca calcitonin related polypeptide alpha involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004624766:6,764,388...6,771,396
Ensembl chrNW_004624766:6,766,185...6,768,173 		JBrowse link
G Camp cathelicidin antimicrobial peptide involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:73,429,893...73,431,104 JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:23258413) UniProt PMID:23258413 NCBI chrNW_004624819:587,739...680,618
Ensembl chrNW_004624819:643,045...680,684 		JBrowse link
G Clec4e C-type lectin domain family 4 member E involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23602766) Ensembl
MGI		 PMID:23602766 GO_REF:0000107 NCBI chrNW_004624860:4,108,782...4,113,693
Ensembl chrNW_004624860:4,108,640...4,113,839 		JBrowse link
G Clec5a C-type lectin domain containing 5A involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624765:21,865,583...21,874,985
Ensembl chrNW_004624765:21,864,722...21,875,013 		JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in ISO (MGI:3576850|PMID:15845454) UniProt PMID:15845454 MGI:3576850 NCBI chrNW_004624752:26,871,556...26,885,778
Ensembl chrNW_004624752:26,871,292...26,891,910 		JBrowse link
G Crp C-reactive protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624794:1,531,555...1,533,804
Ensembl chrNW_004624794:1,531,571...1,533,804 		JBrowse link
G CUNH17orf62 chromosome unknown C17orf62 homolog involved_in ISO (PMID:30361506)
(MGI:5901952|PMID:28351984)		 UniProt PMID:28351984 PMID:30361506 MGI:5901952 NCBI chrNW_004624801:11,209,672...11,214,489
Ensembl chrNW_004624801:11,209,672...11,214,508 		JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624731:1,705,953...1,719,452
Ensembl chrNW_004624731:1,706,043...1,719,452 		JBrowse link
G Cyld CYLD lysine 63 deubiquitinase involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624757:5,895,912...5,953,485 JBrowse link
G Dapk1 death associated protein kinase 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624809:9,585,426...9,794,582
Ensembl chrNW_004624809:9,586,225...9,793,208 		JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:18583960) UniProt PMID:18583960 NCBI chrNW_004624762:14,290,267...14,305,437
Ensembl chrNW_004624762:14,290,267...14,305,633 		JBrowse link
G Defb1 defensin beta 1 involved_in ISO (MGI:2179639|PMID:12010999) UniProt PMID:12010999 MGI:2179639 NCBI chrNW_004624861:4,710,687...4,718,867 JBrowse link
G Defb110 defensin beta 110 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624855:6,224,893...6,228,902
Ensembl chrNW_004624855:6,224,893...6,228,902 		JBrowse link
G Defb123 defensin beta 123 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624741:1,078,458...1,081,062
Ensembl chrNW_004624741:1,078,332...1,081,071 		JBrowse link
G Defb127 defensin beta 127 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624741:1,232,002...1,233,736 JBrowse link
G Defb128 defensin beta 128 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624741:1,249,893...1,251,715 JBrowse link
G Dhx58 DExH-box helicase 58 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624795:1,787,958...1,793,475
Ensembl chrNW_004624795:1,787,958...1,794,692 		JBrowse link
G Ecsit ECSIT signaling integrator involved_in IEA TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000118 NCBI chrNW_004624828:3,264,054...3,276,270
Ensembl chrNW_004624828:3,264,149...3,269,030 		JBrowse link
G Epg5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_or_within ISO (PMID:26764600) MGI PMID:26764600 NCBI chrNW_004624778:9,490,744...9,614,289
Ensembl chrNW_004624778:9,491,258...9,614,299 		JBrowse link
G Ermap erythroblast membrane associated protein (Scianna blood group) involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624892:2,053,670...2,072,647 JBrowse link
G Fadd Fas associated via death domain involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624767:17,050,929...17,059,648
Ensembl chrNW_004624767:17,055,509...17,059,705 		JBrowse link
G Fbxo9 F-box protein 9 acts_upstream_of_or_within ISO (PMID:19805818) MGI PMID:19805818 NCBI chrNW_004624850:287,585...335,939
Ensembl chrNW_004624850:287,586...336,827 		JBrowse link
G Fcer1g Fc fragment of IgE receptor Ig acts_upstream_of_or_within ISO (PMID:23602766) MGI PMID:23602766 NCBI chrNW_004624794:168,564...172,433
Ensembl chrNW_004624794:168,564...172,034 		JBrowse link
G Fcn1 ficolin 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624760:2,743,996...2,751,116
Ensembl chrNW_004624760:2,743,996...2,751,110 		JBrowse link
G Fgr FGR proto-oncogene, Src family tyrosine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:11,482,719...11,513,215
Ensembl chrNW_004624764:11,489,685...11,513,270 		JBrowse link
G Fosl2 FOS like 2, AP-1 transcription factor subunit acts_upstream_of_or_within ISO (PMID:30181393) MGI PMID:30181393 NCBI chrNW_004624738:10,370,479...10,391,623
Ensembl chrNW_004624738:10,370,103...10,391,623 		JBrowse link
G Frk fyn related Src family tyrosine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624856:2,485,044...2,580,784
Ensembl chrNW_004624856:2,489,898...2,575,101 		JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624933:248,298...456,933
Ensembl chrNW_004624933:389,627...456,520 		JBrowse link
G Garin5a golgi associated RAB2 interactor 5A involved_in ISO (MGI:6709519|PMID:28930687) UniProt PMID:28930687 MGI:6709519 NCBI chrNW_004624832:4,084,962...4,088,932 JBrowse link
G Gbp5 guanylate binding protein 5 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624742:8,324,902...8,335,965 JBrowse link
G Hck HCK proto-oncogene, Src family tyrosine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624741:456,186...494,207
Ensembl chrNW_004624741:455,696...493,821 		JBrowse link
G Herc5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 involved_in ISO (PMID:28724761) UniProt PMID:28724761 NCBI chrNW_004624757:16,108,509...16,151,654
Ensembl chrNW_004624757:16,028,668...16,152,628 		JBrowse link
G Hk1 hexokinase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624754:3,594,478...3,656,231
Ensembl chrNW_004624754:3,591,090...3,659,760 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624769:4,834,998...4,837,111 JBrowse link
G Hmgb3 high mobility group box 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624923:1,245,898...1,250,571 JBrowse link
G Ifi35 interferon induced protein 35 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624795:1,260,476...1,268,015
Ensembl chrNW_004624795:1,260,476...1,262,080 		JBrowse link
G Ifih1 interferon induced with helicase C domain 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624732:3,187,791...3,248,795
Ensembl chrNW_004624732:3,187,791...3,250,981 		JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (PMID:7813427) UniProt PMID:7813427 NCBI chrNW_004624736:25,099,061...25,099,746 JBrowse link
G Il23a interleukin 23 subunit alpha involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624802:11,662,851...11,664,444
Ensembl chrNW_004624802:11,662,753...11,665,418 		JBrowse link
G Inava innate immunity activator involved_in ISO (PMID:28436939) UniProt PMID:28436939 NCBI chrNW_004624807:9,718,307...9,738,282
Ensembl chrNW_004624807:9,718,307...9,738,148 		JBrowse link
G Ipo7 importin 7 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19805818) Ensembl
MGI		 PMID:19805818 GO_REF:0000107 NCBI chrNW_004624766:1,519,946...1,594,014
Ensembl chrNW_004624766:1,519,937...1,594,018 		JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 involved_in ISO (MGI:3694380|PMID:16831874) UniProt PMID:16831874 MGI:3694380 NCBI chrNW_004624946:613,392...618,459
Ensembl chrNW_004624946:613,890...618,445 		JBrowse link
G Irak4 interleukin 1 receptor associated kinase 4 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004624816:8,783,075...8,808,734
Ensembl chrNW_004624816:8,778,299...8,802,883 		JBrowse link
G Irf5 interferon regulatory factor 5 involved_in ISO (MGI:3575850|PMID:15665823) UniProt PMID:15665823 MGI:3575850 NCBI chrNW_004624783:7,267,680...7,275,918
Ensembl chrNW_004624783:7,260,005...7,274,433 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:16888103)
(MGI:4354422|PMID:19620982)		 UniProt PMID:16888103 PMID:19620982 MGI:4354422 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Isg15 ISG15 ubiquitin like modifier involved_in ISO (PMID:28724761) UniProt PMID:28724761 NCBI chrNW_004624818:8,510,657...8,511,749 JBrowse link
G Jchain joining chain of multimeric IgA and IgM involved_in ISO (PMID:21786026) UniProt PMID:21786026 NCBI chrNW_004624890:1,992,239...2,022,352
Ensembl chrNW_004624890:1,990,696...2,014,041 		JBrowse link
G Lbp lipopolysaccharide binding protein involved_in IEA TreeGrafter
UniProt		 GO_REF:0000043 GO_REF:0000104 GO_REF:0000118 NCBI chrNW_004624842:1,306,299...1,332,269
Ensembl chrNW_004624842:1,301,831...1,332,346 		JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624764:15,469,582...15,495,351
Ensembl chrNW_004624764:15,472,685...15,495,351 		JBrowse link
G LOC101697928 high mobility group protein B1 pseudogene involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624795:8,754,438...8,755,131
Ensembl chrNW_004624795:8,754,482...8,754,979 		JBrowse link
G LOC101698177 guanylate-binding protein 6 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624742:8,336,898...8,383,334
Ensembl chrNW_004624742:8,366,651...8,384,618 		JBrowse link
G LOC101698564 guanylate-binding protein 5 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624742:8,426,088...8,441,480 JBrowse link
G LOC101698926 guanylate-binding protein 4 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624742:8,478,930...8,499,218 JBrowse link
G LOC101699770 guanylate-binding protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624742:8,543,804...8,564,944
Ensembl chrNW_004624742:8,543,688...8,594,728 		JBrowse link
G LOC101700161 BPI fold-containing family A member 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624834:139,703...147,519 JBrowse link
G LOC101700189 major histocompatibility complex class I-related gene protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624771:1,275,364...1,298,967
Ensembl chrNW_004624771:1,275,302...1,293,552 		JBrowse link
G LOC101700852 guanylate-binding protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624742:8,581,575...8,595,931 JBrowse link
G LOC101703392 twinfilin-2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624730:6,004,706...6,020,876 JBrowse link
G LOC101703789 high mobility group protein B3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624801:11,075,521...11,078,065 JBrowse link
G LOC101704254 beta-defensin 106A involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004625012:29,352...34,664 JBrowse link
G LOC101708924 15 kDa protein B-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:74,017,915...74,020,601 JBrowse link
G LOC101709509 cytochrome b-245 heavy chain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:17,759,625...17,793,434
Ensembl chrNW_004624762:17,757,404...17,793,467 		JBrowse link
G LOC101717043 cytochrome b-245 light chain involved_in ISO (PMID:2243141)
(MGI:5901952|PMID:28351984)		 BHF-UCL
UniProt		 PMID:2243141 PMID:28351984 MGI:5901952 NCBI chrNW_004624746:911,852...919,361
Ensembl chrNW_004624746:911,842...919,362 		JBrowse link
G LOC101717935 beta-defensin 122-like involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624741:1,088,544...1,091,460 JBrowse link
G LOC101718983 2'-5'-oligoadenylate synthase-like protein 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624747:12,651,044...12,666,497 JBrowse link
G LOC101719002 complement C4-A involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624754:24,258,026...24,270,710 JBrowse link
G LOC101719334 2'-5'-oligoadenylate synthase-like protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624747:12,675,540...12,698,183
Ensembl chrNW_004624747:12,675,498...12,698,325 		JBrowse link
G LOC101719419 interferon lambda-2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004626159:26...1,277 JBrowse link
G LOC101724133 high mobility group protein B3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624737:3,054,348...3,056,381 JBrowse link
G LOC110343846 mucosal pentraxin-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624794:2,044,204...2,047,466 JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:9596699) UniProt PMID:9596699 NCBI chrNW_004624730:74,636,554...74,656,817
Ensembl chrNW_004624730:74,636,522...74,656,886 		JBrowse link
G Ly86 lymphocyte antigen 86 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624756:18,770,503...18,821,191
Ensembl chrNW_004624756:18,770,503...18,820,672 		JBrowse link
G Ly96 lymphocyte antigen 96 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624744:17,209,285...17,241,347
Ensembl chrNW_004624744:17,208,990...17,241,347 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624886:4,029,318...4,168,797
Ensembl chrNW_004624886:4,027,178...4,168,902 		JBrowse link
G Malt1 MALT1 paracaspase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624792:4,148,258...4,223,431
Ensembl chrNW_004624792:4,148,453...4,217,548 		JBrowse link
G Masp1 MBL associated serine protease 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624730:69,569,046...69,632,401
Ensembl chrNW_004624730:69,568,915...69,632,470 		JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in
acts_upstream_of_positive_effect		 ISO (PMID:19609254), (PMID:19631370)
(PMID:23951545)		 UniProt PMID:19609254 PMID:19631370 PMID:23951545 NCBI chrNW_004624741:4,936,556...4,951,081
Ensembl chrNW_004624741:4,939,040...4,954,058 		JBrowse link
G Mbl2 mannose binding lectin 2 involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004624791:10,881,319...10,886,294
Ensembl chrNW_004624791:10,881,268...10,886,297 		JBrowse link
G Mfhas1 multifunctional ROCO family signaling regulator 1 involved_in ISO (PMID:28471450), (PMID:28609714)
(MGI:6162316|PMID:26599367)		 UniProt PMID:26599367 PMID:28471450 PMID:28609714 MGI:6162316 NCBI chrNW_004624839:4,908,861...5,000,218
Ensembl chrNW_004624839:4,908,639...5,000,677 		JBrowse link
G Mid2 midline 2 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004624803:8,536,946...8,650,775
Ensembl chrNW_004624803:8,536,953...8,650,805 		JBrowse link
G Mmp3 matrix metallopeptidase 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624878:39,282...47,386
Ensembl chrNW_004624878:39,358...47,075 		JBrowse link
G Msrb1 methionine sulfoxide reductase B1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624913:310,708...315,383 JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:2,677,259...2,681,408
Ensembl chrNW_004624731:2,677,290...2,681,489 		JBrowse link
G N4bp3 NEDD4 binding protein 3 acts_upstream_of_positive_effect ISO (PMID:23951545) UniProt PMID:23951545 NCBI chrNW_004624733:41,346,894...41,353,363
Ensembl chrNW_004624733:41,347,730...41,353,829 		JBrowse link
G Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 acts_upstream_of_or_within ISO (PMID:25652399) MGI PMID:25652399 NCBI chrNW_004624759:5,630,522...5,733,928 JBrowse link
G Nedd4 NEDD4 E3 ubiquitin protein ligase acts_upstream_of_positive_effect ISO (PMID:23951545) UniProt PMID:23951545 NCBI chrNW_004624731:5,855,678...5,954,119
Ensembl chrNW_004624731:5,862,626...5,951,421 		JBrowse link
G Nlrc4 NLR family CARD domain containing 4 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624738:13,836,678...13,863,881
Ensembl chrNW_004624738:13,836,717...13,873,783 		JBrowse link
G Nlrc5 NLR family CARD domain containing 5 involved_in ISO (MGI:4454346|PMID:20434986)
(PMID:20434986)		 UniProt PMID:20434986 MGI:4454346 NCBI chrNW_004624746:28,954,009...29,030,337
Ensembl chrNW_004624746:28,954,016...29,030,322 		JBrowse link
G Nmi N-myc and STAT interactor involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624866:4,230,258...4,263,156
Ensembl chrNW_004624866:4,229,535...4,263,688 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624739:285,791...339,752
Ensembl chrNW_004624739:285,689...341,956 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Npy neuropeptide Y involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004624739:6,277,704...6,285,454
Ensembl chrNW_004624739:6,277,612...6,285,397 		JBrowse link
G Nqo1 NAD(P)H quinone dehydrogenase 1 involved_in ISO (PMID:29934320) MGI PMID:29934320 NCBI chrNW_004624746:16,684,620...16,698,194
Ensembl chrNW_004624746:16,684,407...16,697,479 		JBrowse link
G Nrros negative regulator of reactive oxygen species NOT|involved_in ISO (MGI:6192878|PMID:29909984) UniProt PMID:29909984 MGI:6192878 NCBI chrNW_004624730:61,717,592...61,742,374
Ensembl chrNW_004624730:61,735,134...61,742,541 		JBrowse link
G Oas1 2'-5'-oligoadenylate synthetase 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624747:19,428,994...19,434,512
Ensembl chrNW_004624747:19,428,833...19,434,550 		JBrowse link
G Oas2 2'-5'-oligoadenylate synthetase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624747:19,373,645...19,397,289
Ensembl chrNW_004624747:19,378,418...19,396,913 		JBrowse link
G Otulin OTU deubiquitinase with linear linkage specificity involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624751:11,676,932...11,703,143
Ensembl chrNW_004624751:11,676,850...11,702,061 		JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 involved_in IEA UniProt
InterPro		 GO_REF:0000002 GO_REF:0000043 NCBI chrNW_004624832:7,220,739...7,225,146
Ensembl chrNW_004624832:7,221,064...7,224,615 		JBrowse link
G Pja2 praja ring finger ubiquitin ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624743:27,251,937...27,331,213
Ensembl chrNW_004624743:27,254,436...27,301,934 		JBrowse link
G Pml PML nuclear body scaffold involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624781:464,858...498,146
Ensembl chrNW_004624781:464,658...497,775 		JBrowse link
G Polr3a RNA polymerase III subunit A involved_in ISO (PMID:19609254) UniProt PMID:19609254 NCBI chrNW_004624754:11,166,126...11,215,205
Ensembl chrNW_004624754:11,173,601...11,215,258 		JBrowse link
G Pqbp1 polyglutamine binding protein 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624893:680,929...684,251
Ensembl chrNW_004624893:681,167...684,251 		JBrowse link
G Ptx3 pentraxin 3 involved_in ISO (PMID:23544079) BHF-UCL PMID:23544079 NCBI chrNW_004624730:35,125,536...35,131,645
Ensembl chrNW_004624730:35,125,605...35,131,367 		JBrowse link
G Rab2b RAB2B, member RAS oncogene family involved_in ISO (MGI:6709519|PMID:28930687) UniProt PMID:28930687 MGI:6709519 NCBI chrNW_004624825:7,477,729...7,493,669
Ensembl chrNW_004624825:7,478,151...7,493,649 		JBrowse link
G Rarres2 retinoic acid receptor responder 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624800:6,138,236...6,140,922
Ensembl chrNW_004624800:6,139,006...6,140,679 		JBrowse link
G Rb1cc1 RB1 inducible coiled-coil 1 acts_upstream_of_or_within ISO (PMID:26764600) MGI PMID:26764600 NCBI chrNW_004624735:2,778,191...2,860,762 JBrowse link
G Rel REL proto-oncogene, NF-kB subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624833:1,016,330...1,053,514
Ensembl chrNW_004624833:1,022,656...1,053,342 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:20,732,813...20,742,016
Ensembl chrNW_004624767:20,732,938...20,741,272 		JBrowse link
G Rigi RNA sensor RIG-I involved_in IEA Ensembl
UniProt		 GO_REF:0000043 GO_REF:0000107 NCBI chrNW_004624736:37,134,718...37,204,543
Ensembl chrNW_004624736:37,133,059...37,197,218 		JBrowse link
G Riok3 RIO kinase 3 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004624770:8,675,501...8,696,999
Ensembl chrNW_004624770:8,675,294...8,697,620 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890 		JBrowse link
G Rnase6 ribonuclease A family member k6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624825:4,468,213...4,469,557
Ensembl chrNW_004624825:4,468,213...4,469,566 		JBrowse link
G Rnase7 ribonuclease A family member 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624825:7,034,523...7,036,967
Ensembl chrNW_004624825:7,036,229...7,036,702 		JBrowse link
G Rnf170 ring finger protein 170 acts_upstream_of_or_within ISO (PMID:31076723) MGI PMID:31076723 NCBI chrNW_004624780:67,160...127,620
Ensembl chrNW_004624780:66,049...126,383 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624846:3,395,536...3,408,616
Ensembl chrNW_004624846:3,395,406...3,408,626 		JBrowse link
G Sarm1 sterile alpha and TIR motif containing 1 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624786:974,785...1,001,810
Ensembl chrNW_004624786:974,876...997,956 		JBrowse link
G Sdhaf4 succinate dehydrogenase complex assembly factor 4 acts_upstream_of_or_within ISO (PMID:19805818) MGI PMID:19805818 NCBI chrNW_004624819:9,320,343...9,336,196
Ensembl chrNW_004624819:9,320,368...9,336,572 		JBrowse link
G Serinc3 serine incorporator 3 involved_in ISO (PMID:26416733), (PMID:26416734) UniProt PMID:26416733 PMID:26416734 NCBI chrNW_004624790:9,951,067...9,983,251
Ensembl chrNW_004624790:9,951,233...9,980,234 		JBrowse link
G Serinc5 serine incorporator 5 involved_in ISO (PMID:26416733), (PMID:26416734) UniProt PMID:26416733 PMID:26416734 NCBI chrNW_004624743:1,239,698...1,308,735
Ensembl chrNW_004624743:1,242,835...1,308,842 		JBrowse link
G Sh2d1a SH2 domain containing 1A involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624797:3,120,123...3,142,564
Ensembl chrNW_004624797:3,120,123...3,142,564 		JBrowse link
G Skp2 S-phase kinase associated protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624759:18,796,055...18,858,692
Ensembl chrNW_004624759:18,830,323...18,858,712 		JBrowse link
G Slc15a2 solute carrier family 15 member 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624912:180,048...222,909
Ensembl chrNW_004624912:179,969...222,909 		JBrowse link
G Slpi secretory leukocyte peptidase inhibitor involved_in ISO (MGI:3777210|PMID:18322212) UniProt PMID:18322212 MGI:3777210 NCBI chrNW_004624790:9,235,830...9,238,562
Ensembl chrNW_004624790:9,235,650...9,239,231 		JBrowse link
G Spon2 spondin 2 acts_upstream_of_or_within ISO (PMID:14691481) MGI PMID:14691481 NCBI chrNW_004624755:26,045,617...26,049,951
Ensembl chrNW_004624755:26,045,493...26,053,476 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624743:32,277,197...32,283,346
Ensembl chrNW_004624743:32,273,385...32,283,235 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624868:1,654,079...1,738,648
Ensembl chrNW_004624868:1,653,997...1,701,391 		JBrowse link
G Tac1 tachykinin precursor 1 involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004624813:4,542,226...4,550,378
Ensembl chrNW_004624813:4,542,011...4,550,486 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in ISO (PMID:25636800) UniProt PMID:25636800 NCBI chrNW_004624802:3,861,821...3,914,061
Ensembl chrNW_004624802:3,862,709...3,914,028 		JBrowse link
G Tifa TRAF interacting protein with forkhead associated domain involved_in IEA TreeGrafter
UniProt
Ensembl		 GO_REF:0000043 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624838:6,160,712...6,167,408 JBrowse link
G Tirap TIR domain containing adaptor protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624812:433,540...445,517
Ensembl chrNW_004624812:439,319...446,646 		JBrowse link
G Tlr1 toll like receptor 1 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004624840:7,287,772...7,349,282
Ensembl chrNW_004624840:7,287,781...7,290,162 		JBrowse link
G Tlr2 toll like receptor 2 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
G Tlr3 toll like receptor 3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624769:16,925,969...16,945,250
Ensembl chrNW_004624769:16,925,984...16,941,196 		JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Tlr5 toll like receptor 5 involved_in IEA UniProt GO_REF:0000043 GO_REF:0000104 NCBI chrNW_004624835:5,495,723...5,503,462
Ensembl chrNW_004624835:5,500,461...5,503,034 		JBrowse link
G Tlr7 toll like receptor 7 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624882:1,375,216...1,379,705 JBrowse link
G Tlr8 toll like receptor 8 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624882:1,240,519...1,247,311
Ensembl chrNW_004624882:1,240,626...1,312,468 		JBrowse link
G Tnfaip8l2 TNF alpha induced protein 8 like 2 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624772:18,695,670...18,698,304
Ensembl chrNW_004624772:18,695,083...18,697,688 		JBrowse link
G Tollip toll interacting protein involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624766:21,365,659...21,388,366
Ensembl chrNW_004624766:21,365,680...21,388,471 		JBrowse link
G Traf2 TNF receptor associated factor 2 acts_upstream_of_positive_effect ISO (PMID:23951545) UniProt PMID:23951545 NCBI chrNW_004624760:952,574...973,511
Ensembl chrNW_004624760:952,574...965,661 		JBrowse link
G Traf3 TNF receptor associated factor 3 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624734:1,728,353...1,820,345
Ensembl chrNW_004624734:1,728,255...1,786,010 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:10,729,766...10,803,253
Ensembl chrNW_004624767:10,729,413...10,748,455 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:23160154) MGI PMID:23160154 NCBI chrNW_004624730:2,431,270...2,433,010
Ensembl chrNW_004624730:2,431,999...2,432,959 		JBrowse link
G Trim11 tripartite motif containing 11 involved_in ISO (MGI:5545996|PMID:18248090)
(PMID:18248090)		 UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004624937:1,100,297...1,109,017
Ensembl chrNW_004624937:1,100,297...1,109,027 		JBrowse link
G Trim13 tripartite motif containing 13 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624748:4,683,518...4,765,944 JBrowse link
G Trim14 tripartite motif containing 14 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624825:2,749,911...2,767,737
Ensembl chrNW_004624825:2,749,863...2,768,700 		JBrowse link
G Trim21 tripartite motif containing 21 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004624817:5,643,788...5,651,514
Ensembl chrNW_004624817:5,639,779...5,653,361 		JBrowse link
G Trim25 tripartite motif containing 25 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004624795:11,967,908...11,986,707
Ensembl chrNW_004624795:11,971,610...11,986,608 		JBrowse link
G Trim26 tripartite motif containing 26 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:25,238,992...25,258,454
Ensembl chrNW_004624754:25,230,073...25,259,980 		JBrowse link
G Trim27 tripartite motif containing 27 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624756:24,897,206...24,908,449
Ensembl chrNW_004624756:24,897,206...24,908,478 		JBrowse link
G Trim28 tripartite motif containing 28 involved_in
acts_upstream_of_or_within		 ISO (PMID:18248090)
(PMID:19270682)		 UniProt
MGI		 PMID:18248090 PMID:19270682 NCBI chrNW_004624832:49,324...56,113 JBrowse link
G Trim32 tripartite motif containing 32 involved_in ISO (PMID:18248090) UniProt PMID:18248090 NCBI chrNW_004624760:18,577,764...18,600,869
Ensembl chrNW_004624760:18,585,279...18,599,659 		JBrowse link
G Trim35 tripartite motif containing 35 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624758:22,035,096...22,051,940
Ensembl chrNW_004624758:22,034,539...22,051,580 		JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004624740:16,154,441...16,163,057
Ensembl chrNW_004624740:16,159,874...16,162,090 		JBrowse link
G Trim59 tripartite motif containing 59 involved_in ISO (MGI:5545996|PMID:18248090) UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004624730:38,178,975...38,192,922
Ensembl chrNW_004624730:38,181,060...38,192,885 		JBrowse link
G Trim62 tripartite motif containing 62 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624764:16,200,539...16,230,713
Ensembl chrNW_004624764:16,200,539...16,230,780 		JBrowse link
G Trim8 tripartite motif containing 8 involved_in ISO (PMID:18248090)
(MGI:5545996|PMID:18248090)		 UniProt PMID:18248090 MGI:5545996 NCBI chrNW_004624831:2,020,185...2,031,001
Ensembl chrNW_004624831:2,020,227...2,032,099 		JBrowse link
G Triml1 tripartite motif family like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624769:19,095,899...19,103,190
Ensembl chrNW_004624769:19,097,452...19,102,862 		JBrowse link
G Triml2 tripartite motif family like 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624769:19,032,145...19,050,539
Ensembl chrNW_004624769:19,032,190...19,050,326 		JBrowse link
G Ttc4 tetratricopeptide repeat domain 4 involved_in ISO (PMID:29251827) UniProt PMID:29251827 NCBI chrNW_004624862:5,097,233...5,126,555
Ensembl chrNW_004624862:5,097,343...5,126,537 		JBrowse link
G Uba7 ubiquitin like modifier activating enzyme 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:3,720,516...3,729,586
Ensembl chrNW_004624730:3,718,573...3,730,097 		JBrowse link
G Ube2l6 ubiquitin conjugating enzyme E2 L6 involved_in ISO (PMID:28724761) UniProt PMID:28724761 NCBI chrNW_004624864:3,103,656...3,113,349
Ensembl chrNW_004624864:3,108,380...3,113,349 		JBrowse link
G Umod uromodulin involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624782:3,639,955...3,654,026
Ensembl chrNW_004624782:3,640,214...3,652,324 		JBrowse link
G Vip vasoactive intestinal peptide involved_in ISO (PMID:18603306) UniProt PMID:18603306 NCBI chrNW_004624785:5,466,429...5,487,763
Ensembl chrNW_004624785:5,468,563...5,488,143 		JBrowse link
G Vnn1 vanin 1 involved_in ISO (MGI:3029614|PMID:14966568) BHF-UCL PMID:14966568 MGI:3029614 NCBI chrNW_004624753:6,869,269...6,892,217
Ensembl chrNW_004624753:6,867,953...6,892,186 		JBrowse link
G Yes1 YES proto-oncogene 1, Src family tyrosine kinase involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624770:11,190,103...11,275,823
Ensembl chrNW_004624770:11,190,595...11,221,512 		JBrowse link
G Znf684 zinc finger protein 684 acts_upstream_of_or_within ISO (PMID:19270682) MGI PMID:19270682 NCBI chrNW_004624892:16,472...32,432
Ensembl chrNW_004624892:22,940...30,821 		JBrowse link
activation of innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp6 caspase 6 involved_in ISO (PMID:32298652) UniProt PMID:32298652 NCBI chrNW_004624830:170,392...179,883
Ensembl chrNW_004624830:171,427...184,814 		JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO (MGI:5505711|PMID:23929945), (MGI:5908326|PMID:24077100), (MGI:6119245|PMID:29426904), (MGI:6754862|PMID:32911480), (MGI:6810288|PMID:32911481), (MGI:6828894|PMID:32913000)
(PMID:23258413), (PMID:23929945), (PMID:24077100), (PMID:26046437), (PMID:28363908), (PMID:29426904), (PMID:30007416), (PMID:32817552), (PMID:32911482), (PMID:32912999), (PMID:33542149), (PMID:35438208)
(MGI:5487472|PMID:23258413)		 UniProt PMID:23258413 PMID:23929945 PMID:24077100 PMID:26046437 PMID:28363908 More... MGI:5487472 MGI:5505711 MGI:5908326 MGI:6119245 MGI:6754862 MGI:6810288 MGI:6828894 NCBI chrNW_004624819:587,739...680,618
Ensembl chrNW_004624819:643,045...680,684 		JBrowse link
G Gbp5 guanylate binding protein 5 involved_in ISO (MGI:5571540|PMID:24739961) UniProt PMID:24739961 MGI:5571540 NCBI chrNW_004624742:8,324,902...8,335,965 JBrowse link
G Hexim1 HEXIM P-TEFb complex subunit 1 involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004624795:257,553...260,685 JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:24971542) UniProt PMID:24971542 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in ISO (PMID:20628368) UniProt PMID:20628368 NCBI chrNW_004624734:2,233,932...2,239,687
Ensembl chrNW_004624734:2,233,547...2,241,436 		JBrowse link
G LOC101703392 twinfilin-2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624730:6,004,706...6,020,876 JBrowse link
G LOC101719341 X-ray repair cross-complementing protein 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624823:8,901,334...9,017,277
Ensembl chrNW_004624823:8,901,334...8,999,445 		JBrowse link
G Matr3 matrin 3 involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004624743:32,086,821...32,147,079
Ensembl chrNW_004624743:32,115,544...32,146,921 		JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:18818105)
(PMID:20628368)		 BHF-UCL
UniProt		 PMID:18818105 PMID:20628368 NCBI chrNW_004624741:4,936,556...4,951,081
Ensembl chrNW_004624741:4,939,040...4,954,058 		JBrowse link
G Nlrc4 NLR family CARD domain containing 4 involved_in ISO (MGI:3662990|PMID:16648852) UniProt PMID:16648852 MGI:3662990 NCBI chrNW_004624738:13,836,678...13,863,881
Ensembl chrNW_004624738:13,836,717...13,873,783 		JBrowse link
G Nlrp10 NLR family pyrin domain containing 10 involved_in ISO (PMID:22672233) UniProt PMID:22672233 NCBI chrNW_004624766:172,727...177,029 JBrowse link
G Nono non-POU domain containing octamer binding involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004624903:1,562,818...1,583,648
Ensembl chrNW_004624903:1,562,743...1,586,985 		JBrowse link
G Pqbp1 polyglutamine binding protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624893:680,929...684,251
Ensembl chrNW_004624893:681,167...684,251 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004624735:7,534,483...7,702,079
Ensembl chrNW_004624735:7,534,506...7,700,305 		JBrowse link
G Pspc1 paraspeckle component 1 involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004624776:17,906,700...17,978,885
Ensembl chrNW_004624776:17,906,063...17,978,098 		JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (PMID:21575908)
(MGI:3839029|PMID:19158675)		 UniProt PMID:19158675 PMID:21575908 MGI:3839029 NCBI chrNW_004624782:14,247,333...14,249,861
Ensembl chrNW_004624782:14,247,864...14,249,000 		JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004624764:18,223,845...18,239,748
Ensembl chrNW_004624764:18,228,365...18,240,340 		JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (PMID:22783022) BHF-UCL PMID:22783022 NCBI chrNW_004624894:300,027...388,397
Ensembl chrNW_004624894:301,082...362,683 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624743:32,277,197...32,283,346
Ensembl chrNW_004624743:32,273,385...32,283,235 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15661922) Ensembl
MGI		 PMID:15661922 GO_REF:0000107 NCBI chrNW_004624802:3,861,821...3,914,061
Ensembl chrNW_004624802:3,862,709...3,914,028 		JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15661922) Ensembl
MGI		 PMID:15661922 GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Tlr7 toll like receptor 7 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624882:1,375,216...1,379,705 JBrowse link
G Tomm70 translocase of outer mitochondrial membrane 70 involved_in ISO (PMID:20628368) UniProt PMID:20628368 NCBI chrNW_004624789:13,792,434...13,828,403
Ensembl chrNW_004624789:13,792,049...13,829,104 		JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in ISO (PMID:28712728) UniProt PMID:28712728 NCBI chrNW_004624752:6,987,456...7,010,834
Ensembl chrNW_004624752:6,979,271...7,010,787 		JBrowse link
G Zbp1 Z-DNA binding protein 1 involved_in ISO (MGI:6434626|PMID:32296175), (MGI:6436412|PMID:32200799)
(MGI:6453154|PMID:32350114), (MGI:6490907|PMID:33109609)		 UniProt PMID:32200799 PMID:32296175 PMID:32350114 PMID:33109609 MGI:6434626 MGI:6436412 MGI:6453154 MGI:6490907 NCBI chrNW_004624741:24,022,433...24,033,090 JBrowse link
G Zcchc3 zinc finger CCHC-type containing 3 involved_in ISO (PMID:30135424), (PMID:30193849)
(MGI:6209107|PMID:30135424), (MGI:6271678|PMID:30193849)		 UniProt PMID:30135424 PMID:30193849 MGI:6209107 MGI:6271678 NCBI chrNW_004624741:1,399,405...1,400,980
Ensembl chrNW_004624741:1,399,481...1,400,701 		JBrowse link
G Znfx1 zinc finger NFX1-type containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624790:6,075,202...6,103,736
Ensembl chrNW_004624790:6,078,565...6,102,715 		JBrowse link
antibacterial innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Defb136 defensin beta 136 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624758:25,439,976...25,440,556
Ensembl chrNW_004624758:25,439,976...25,440,556 		JBrowse link
G Marchf2 membrane associated ring-CH-type finger 2 involved_in ISO (MGI:6472811|PMID:32935379) UniProt PMID:32935379 MGI:6472811 NCBI chrNW_004624828:1,182,261...1,197,327
Ensembl chrNW_004624828:1,181,870...1,199,307 		JBrowse link
G Mpeg1 macrophage expressed 1 involved_in
NOT|involved_in		 ISO (MGI:6208630|PMID:26402460)
(MGI:7539255|PMID:35471730)		 UniProt PMID:26402460 PMID:35471730 MGI:6208630 MGI:7539255 NCBI chrNW_004624864:1,470,862...1,474,957
Ensembl chrNW_004624864:1,470,887...1,473,046 		JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in ISO (PMID:20406817) UniProt PMID:20406817 NCBI chrNW_004624830:5,334,273...5,430,887
Ensembl chrNW_004624830:5,333,616...5,408,723 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in ISO (PMID:20406817) UniProt PMID:20406817 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Slc15a2 solute carrier family 15 member 2 involved_in ISO (PMID:20406817) UniProt PMID:20406817 NCBI chrNW_004624912:180,048...222,909
Ensembl chrNW_004624912:179,969...222,909 		JBrowse link
G Tfeb transcription factor EB involved_in ISO (PMID:32753672), (PMID:35662396) UniProt PMID:32753672 PMID:35662396 NCBI chrNW_004624754:17,321,179...17,358,402
Ensembl chrNW_004624754:17,321,162...17,358,524 		JBrowse link
G Umod uromodulin involved_in ISO (PMID:32616672) UniProt PMID:32616672 NCBI chrNW_004624782:3,639,955...3,654,026
Ensembl chrNW_004624782:3,640,214...3,652,324 		JBrowse link
antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl10 BCL10 immune signaling adaptor involved_in ISO (MGI:5310700|PMID:22265677) UniProt PMID:22265677 MGI:5310700 NCBI chrNW_004624742:12,210,333...12,222,533
Ensembl chrNW_004624742:12,210,360...12,221,759 		JBrowse link
G Card9 caspase recruitment domain family member 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:1,533,247...1,542,529
Ensembl chrNW_004624760:1,533,390...1,540,162 		JBrowse link
G Clec4e C-type lectin domain family 4 member E involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624860:4,108,782...4,113,693
Ensembl chrNW_004624860:4,108,640...4,113,839 		JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in ISO (MGI:3844414|PMID:19136564)
(MGI:3694815|PMID:17159984), (MGI:6445005|PMID:32358020)		 ARUK-UCL
UniProt		 PMID:17159984 PMID:19136564 PMID:32358020 MGI:3694815 MGI:3844414 MGI:6445005 NCBI chrNW_004624752:26,871,556...26,885,778
Ensembl chrNW_004624752:26,871,292...26,891,910 		JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISO (PMID:29326275)
(MGI:6110065|PMID:29326275)		 UniProt PMID:29326275 MGI:6110065 NCBI chrNW_004624731:1,705,953...1,719,452
Ensembl chrNW_004624731:1,706,043...1,719,452 		JBrowse link
G Defb136 defensin beta 136 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624758:25,439,976...25,440,556
Ensembl chrNW_004624758:25,439,976...25,440,556 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in ISO (MGI:5300086|PMID:22041900) ARUK-UCL PMID:22041900 MGI:5300086 NCBI chrNW_004624746:5,678,057...5,824,663
Ensembl chrNW_004624746:5,682,666...5,821,855 		JBrowse link
antiviral innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap1 A-kinase anchoring protein 1 involved_in ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004624795:12,089,519...12,121,501
Ensembl chrNW_004624795:12,107,622...12,125,064 		JBrowse link
G Clpb ClpB family mitochondrial disaggregase involved_in ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004624817:4,593,823...4,735,573
Ensembl chrNW_004624817:4,593,639...4,735,091 		JBrowse link
G Dhx15 DEAH-box helicase 15 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624755:7,729,985...7,780,263
Ensembl chrNW_004624755:7,728,027...7,783,784 		JBrowse link
G Dhx16 DEAH-box helicase 16 involved_in ISO (PMID:35263596) UniProt PMID:35263596 NCBI chrNW_004624754:25,040,684...25,054,632
Ensembl chrNW_004624754:25,040,711...25,057,856 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:1,787,958...1,793,475
Ensembl chrNW_004624795:1,787,958...1,794,692 		JBrowse link
G Dus2 dihydrouridine synthase 2 involved_in ISO (PMID:18096616) UniProt PMID:18096616 NCBI chrNW_004624746:18,216,066...18,269,840
Ensembl chrNW_004624746:18,214,301...18,269,506 		JBrowse link
G Eif2ak2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in ISO (PMID:22948139) UniProt PMID:22948139 NCBI chrNW_004624738:18,716,623...18,764,243
Ensembl chrNW_004624738:18,717,092...18,758,457 		JBrowse link
G Hcfc2 host cell factor C2 acts_upstream_of_or_within ISO (PMID:28970238) MGI PMID:28970238 NCBI chrNW_004624750:4,627,848...4,660,448
Ensembl chrNW_004624750:4,629,669...4,660,413 		JBrowse link
G Ifih1 interferon induced with helicase C domain 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:28031478) TreeGrafter
MGI		 PMID:28031478 GO_REF:0000118 NCBI chrNW_004624732:3,187,791...3,248,795
Ensembl chrNW_004624732:3,187,791...3,250,981 		JBrowse link
G Ifit2 interferon induced protein with tetratricopeptide repeats 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:31390091) Ensembl
MGI		 PMID:31390091 GO_REF:0000107 NCBI chrNW_004624737:123,044...129,222
Ensembl chrNW_004624737:119,458...131,567 		JBrowse link
G Ifit3 interferon induced protein with tetratricopeptide repeats 3 involved_in ISO (PMID:21642987) UniProt PMID:21642987 NCBI chrNW_004624737:137,866...160,377
Ensembl chrNW_004624737:137,779...160,525 		JBrowse link
G Irf3 interferon regulatory factor 3 involved_in ISO (PMID:9891032) UniProt PMID:9891032 NCBI chrNW_004624832:4,611,445...4,616,319
Ensembl chrNW_004624832:4,612,374...4,616,276 		JBrowse link
G Marchf2 membrane associated ring-CH-type finger 2 involved_in ISO (MGI:6472811|PMID:32935379) UniProt PMID:32935379 MGI:6472811 NCBI chrNW_004624828:1,182,261...1,197,327
Ensembl chrNW_004624828:1,181,870...1,199,307 		JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:27992402) UniProt PMID:27992402 NCBI chrNW_004624741:4,936,556...4,951,081
Ensembl chrNW_004624741:4,939,040...4,954,058 		JBrowse link
G Mbl2 mannose binding lectin 2 involved_in ISO (PMID:35102342) UniProt PMID:35102342 NCBI chrNW_004624791:10,881,319...10,886,294
Ensembl chrNW_004624791:10,881,268...10,886,297 		JBrowse link
G Morc3 MORC family CW-type zinc finger 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:27,120,083...27,174,257
Ensembl chrNW_004624745:27,121,144...27,174,295 		JBrowse link
G Nck1 NCK adaptor protein 1 involved_in ISO (PMID:18835251) UniProt PMID:18835251 NCBI chrNW_004624730:13,271,575...13,366,930
Ensembl chrNW_004624730:13,226,315...13,366,661 		JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 involved_in ISO (PMID:34161762)
(MGI:5699624|PMID:26494172)
(MGI:6833928|PMID:34678144)		 UniProt PMID:26494172 PMID:34161762 PMID:34678144 MGI:5699624 MGI:6833928 NCBI chrNW_004624766:22,143,405...22,150,903 JBrowse link
G Nmb neuromedin B involved_in ISO (MGI:6435299|PMID:31601264) UniProt PMID:31601264 MGI:6435299 NCBI chrNW_004624768:17,903,116...17,906,340
Ensembl chrNW_004624768:17,902,892...17,906,592 		JBrowse link
G Nmbr neuromedin B receptor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624753:12,017,650...12,029,360
Ensembl chrNW_004624753:12,017,711...12,028,673 		JBrowse link
G Pde12 phosphodiesterase 12 involved_in ISO (PMID:15231837) UniProt PMID:15231837 NCBI chrNW_004624821:306,055...311,101
Ensembl chrNW_004624821:305,864...313,881 		JBrowse link
G Phb1 prohibitin 1 involved_in ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004624795:5,556,728...5,565,969
Ensembl chrNW_004624795:5,556,450...5,565,988 		JBrowse link
G Phb2 prohibitin 2 involved_in ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004624860:3,599,435...3,605,016
Ensembl chrNW_004624860:3,599,687...3,604,872 		JBrowse link
G Prkra protein activator of interferon induced protein kinase EIF2AK2 involved_in ISO (PMID:26454002) UniProt PMID:26454002 NCBI chrNW_004624844:410,461...424,833
Ensembl chrNW_004624844:410,461...424,809 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:38114488) UniProt PMID:38114488 NCBI chrNW_004624767:20,732,813...20,742,016
Ensembl chrNW_004624767:20,732,938...20,741,272 		JBrowse link
G Rigi RNA sensor RIG-I involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624736:37,134,718...37,204,543
Ensembl chrNW_004624736:37,133,059...37,197,218 		JBrowse link
G Rnf135 ring finger protein 135 involved_in ISO (PMID:28469175), (PMID:31006531)
(MGI:6152590|PMID:21147464), (MGI:6155526|PMID:23950712)		 UniProt PMID:21147464 PMID:23950712 PMID:28469175 PMID:31006531 MGI:6152590 MGI:6155526 NCBI chrNW_004624875:221,206...231,178
Ensembl chrNW_004624875:220,771...232,394 		JBrowse link
G Rpsa ribosomal protein SA involved_in ISO (PMID:38114488) UniProt PMID:38114488 NCBI chrNW_004624730:78,808,270...78,813,782 JBrowse link
G Senp7 SUMO specific peptidase 7 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624789:15,182,709...15,397,642
Ensembl chrNW_004624789:15,182,645...15,397,045 		JBrowse link
G Smarca5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 involved_in ISO (PMID:38114488) UniProt PMID:38114488 NCBI chrNW_004624848:3,569,744...3,611,104 JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO (PMID:21074459) UniProt PMID:21074459 NCBI chrNW_004624743:32,277,197...32,283,346
Ensembl chrNW_004624743:32,273,385...32,283,235 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in ISO (PMID:14703513), (PMID:22394562) UniProt PMID:14703513 PMID:22394562 NCBI chrNW_004624802:3,861,821...3,914,061
Ensembl chrNW_004624802:3,862,709...3,914,028 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (PMID:11773383) UniProt PMID:11773383 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531 		JBrowse link
G Traf3ip3 TRAF3 interacting protein 3 acts_upstream_of_or_within ISO (PMID:31390091) MGI PMID:31390091 NCBI chrNW_004624807:2,214,288...2,239,449
Ensembl chrNW_004624807:2,214,449...2,235,048 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO (PMID:18984593) UniProt PMID:18984593 NCBI chrNW_004624767:10,729,766...10,803,253
Ensembl chrNW_004624767:10,729,413...10,748,455 		JBrowse link
G Trim25 tripartite motif containing 25 involved_in ISO (PMID:17392790) UniProt PMID:17392790 NCBI chrNW_004624795:11,967,908...11,986,707
Ensembl chrNW_004624795:11,971,610...11,986,608 		JBrowse link
G Trim6 tripartite motif containing 6 involved_in ISO (PMID:35263596) UniProt PMID:35263596 NCBI chrNW_004624817:7,029,104...7,053,447
Ensembl chrNW_004624817:7,045,228...7,053,525 		JBrowse link
G Trim65 tripartite motif containing 65 acts_upstream_of_or_within ISO (PMID:28031478) MGI PMID:28031478 NCBI chrNW_004624801:5,779,009...5,783,542 JBrowse link
G Trim7 tripartite motif containing 7 involved_in ISO (PMID:35893676) UniProt PMID:35893676 NCBI chrNW_004624958:221,582...234,109
Ensembl chrNW_004624958:222,823...236,979 		JBrowse link
G Uap1 UDP-N-acetylglucosamine pyrophosphorylase 1 involved_in ISO (PMID:36603579) UniProt PMID:36603579 NCBI chrNW_004624826:992,050...1,027,893 JBrowse link
G Ube2n ubiquitin conjugating enzyme E2 N involved_in ISO (PMID:35893676) UniProt PMID:35893676 NCBI chrNW_004624750:13,432,657...13,468,797
Ensembl chrNW_004624750:13,432,661...13,457,776 		JBrowse link
G Ube2w ubiquitin conjugating enzyme E2 W involved_in ISO (PMID:35893676) UniProt PMID:35893676 NCBI chrNW_004624744:17,314,249...17,485,193
Ensembl chrNW_004624744:17,328,604...17,407,817 		JBrowse link
G Usp18 ubiquitin specific peptidase 18 involved_in ISO (PMID:27801882) UniProt PMID:27801882 NCBI chrNW_004624735:9,158,597...9,187,503 JBrowse link
G Usp20 ubiquitin specific peptidase 20 involved_in ISO (PMID:27801882) UniProt PMID:27801882 NCBI chrNW_004624760:5,568,763...5,594,519
Ensembl chrNW_004624760:5,568,761...5,594,510 		JBrowse link
G Usp44 ubiquitin specific peptidase 44 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624750:11,697,919...11,725,421
Ensembl chrNW_004624750:11,710,218...11,724,529 		JBrowse link
G Zbp1 Z-DNA binding protein 1 involved_in ISO (PMID:34192517) UniProt PMID:34192517 NCBI chrNW_004624741:24,022,433...24,033,090 JBrowse link
G Zdhhc1 zinc finger DHHC-type containing 1 involved_in ISO (PMID:25299331)
(MGI:6392967|PMID:25299331)		 UniProt PMID:25299331 MGI:6392967 NCBI chrNW_004624746:18,901,622...18,921,798
Ensembl chrNW_004624746:18,901,589...18,922,066 		JBrowse link
cell surface pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in ISO (PMID:15294986) AgBase PMID:15294986 NCBI chrNW_004624743:33,372,023...33,374,438
Ensembl chrNW_004624743:33,367,898...33,373,922 		JBrowse link
G Clec7a C-type lectin domain containing 7A acts_upstream_of_or_within ISO (PMID:12719478) MGI PMID:12719478 NCBI chrNW_004624752:26,871,556...26,885,778
Ensembl chrNW_004624752:26,871,292...26,891,910 		JBrowse link
G Fcn1 ficolin 1 involved_in ISO (PMID:21037097) UniProt PMID:21037097 NCBI chrNW_004624760:2,743,996...2,751,116
Ensembl chrNW_004624760:2,743,996...2,751,110 		JBrowse link
G Ffar2 free fatty acid receptor 2 involved_in ISO (PMID:21037097) UniProt PMID:21037097 NCBI chrNW_004624794:8,140,629...8,155,313
Ensembl chrNW_004624794:8,140,629...8,155,258 		JBrowse link
G Lbp lipopolysaccharide binding protein involved_in ISO (PMID:15294986) AgBase PMID:15294986 NCBI chrNW_004624842:1,306,299...1,332,269
Ensembl chrNW_004624842:1,301,831...1,332,346 		JBrowse link
G Mbl2 mannose binding lectin 2 involved_in ISO (PMID:22966085) ComplexPortal PMID:22966085 NCBI chrNW_004624791:10,881,319...10,886,294
Ensembl chrNW_004624791:10,881,268...10,886,297 		JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:12719478) MGI PMID:12719478 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
cellular response to type I interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1i2 nuclear receptor subfamily 1 group I member 2 involved_in ISO (PMID:24525126) AgBase PMID:24525126 NCBI chrNW_004624731:28,371,707...28,405,327
Ensembl chrNW_004624731:28,371,707...28,381,357 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:28835460) MGI PMID:28835460 NCBI chrNW_004624730:2,431,270...2,433,010
Ensembl chrNW_004624730:2,431,999...2,432,959 		JBrowse link
cellular response to type II interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (MGI:5489057|PMID:19014335) UniProt PMID:19014335 MGI:5489057 NCBI chrNW_004624751:23,478,263...23,488,834
Ensembl chrNW_004624751:23,478,096...23,483,521 		JBrowse link
G Actb actin beta involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624740:28,087,051...28,090,359
Ensembl chrNW_004624740:28,087,736...28,090,512 		JBrowse link
G Actg1 actin gamma 1 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624801:10,496,876...10,499,737
Ensembl chrNW_004624801:10,496,718...10,499,637 		JBrowse link
G Actr2 actin related protein 2 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624762:8,282,415...8,339,818
Ensembl chrNW_004624762:8,281,433...8,339,830 		JBrowse link
G Actr3 actin related protein 3 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624732:31,360,804...31,427,885
Ensembl chrNW_004624732:31,361,147...31,427,811 		JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:18433458 RGD:2315954 NCBI chrNW_004624760:1,865,474...1,889,394
Ensembl chrNW_004624760:1,865,376...1,889,203 		JBrowse link
G Aif1 allograft inflammatory factor 1 involved_in ISS UniProt GO_REF:0000024 NCBI chrNW_004624754:24,590,071...24,591,913
Ensembl chrNW_004624754:24,590,071...24,591,904 		JBrowse link
G Aqp4 aquaporin 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624770:5,581,192...5,593,470
Ensembl chrNW_004624770:5,580,808...5,594,628 		JBrowse link
G Arg2 arginase 2 ISO RGD PMID:11250887 RGD:4144048 NCBI chrNW_004624734:33,321,161...33,352,306
Ensembl chrNW_004624734:33,321,295...33,352,277 		JBrowse link
G Asl argininosuccinate lyase ISO with TNFalpha RGD PMID:11072090 RGD:4139899 NCBI chrNW_004624740:8,414,664...8,423,797
Ensembl chrNW_004624740:8,414,733...8,423,777 		JBrowse link
G Ass1 argininosuccinate synthase 1 ISO with TNFalpha RGD PMID:11072090 PMID:12589771 RGD:1599307 RGD:4139899 NCBI chrNW_004624760:5,180,095...5,221,677
Ensembl chrNW_004624760:5,180,095...5,221,732 		JBrowse link
G Atl2 atlastin GTPase 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624738:19,836,771...19,902,181
Ensembl chrNW_004624738:19,836,181...19,902,265 		JBrowse link
G Atl3 atlastin GTPase 3 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624767:22,567,888...22,610,214
Ensembl chrNW_004624767:22,567,757...22,609,115 		JBrowse link
G Calm1 calmodulin 1 involved_in ISO (PMID:11972023) UniProt PMID:11972023 NCBI chrNW_004624734:12,030,264...12,041,682
Ensembl chrNW_004624734:12,030,001...12,041,772 		JBrowse link
G Calm2 calmodulin 2 involved_in ISO (PMID:11972023) UniProt PMID:11972023 NCBI chrNW_004624738:28,525,290...28,541,562
Ensembl chrNW_004624738:28,525,285...28,541,514 		JBrowse link
G Calm3 calmodulin 3 involved_in ISO (PMID:11972023) UniProt PMID:11972023 NCBI chrNW_004624832:6,957,775...6,966,505
Ensembl chrNW_004624832:6,958,820...6,966,514 		JBrowse link
G Camk2a calcium/calmodulin dependent protein kinase II alpha involved_in ISO (PMID:11972023) UniProt PMID:11972023 NCBI chrNW_004624774:9,526,323...9,585,647
Ensembl chrNW_004624774:9,526,323...9,585,649 		JBrowse link
G Capg capping actin protein, gelsolin like acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624749:17,706,582...17,764,087
Ensembl chrNW_004624749:17,723,715...17,746,346 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO (PMID:9407497) UniProt PMID:9407497 NCBI chrNW_004624875:3,334,136...3,342,085
Ensembl chrNW_004624875:3,334,078...3,341,614 		JBrowse link
G Cdc42 cell division cycle 42 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624764:6,874,453...6,891,952 JBrowse link
G Cdc42ep2 CDC42 effector protein 2 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chrNW_004624767:21,057,316...21,066,220
Ensembl chrNW_004624767:21,059,993...21,066,829 		JBrowse link
G Cdc42ep4 CDC42 effector protein 4 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624801:3,372,778...3,394,855 JBrowse link
G Cfh complement factor H ISO RGD PMID:12121434 RGD:632369 NCBI chrNW_004624798:3,332,549...3,414,435 JBrowse link
G Ciita class II major histocompatibility complex transactivator ISO RGD PMID:11071855 RGD:632488 NCBI chrNW_004624824:8,099,877...8,156,661
Ensembl chrNW_004624824:8,116,537...8,153,482 		JBrowse link
G Cldn1 claudin 1 ISO RGD PMID:18768927 RGD:11344890 NCBI chrNW_004624730:66,885,674...66,902,345
Ensembl chrNW_004624730:66,885,319...66,903,079 		JBrowse link
G Cripto cripto, EGF-CFC family member involved_in ISO (PMID:17720976) UniProt PMID:17720976 NCBI chrNW_004624730:74,547,226...74,550,526 JBrowse link
G Dapk1 death associated protein kinase 1 involved_in ISO (PMID:18995835)
(MGI:5466658|PMID:23071094)		 UniProt PMID:18995835 PMID:23071094 MGI:5466658 NCBI chrNW_004624809:9,585,426...9,794,582
Ensembl chrNW_004624809:9,586,225...9,793,208 		JBrowse link
G Dapk3 death associated protein kinase 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624828:5,616,839...5,626,849
Ensembl chrNW_004624828:5,621,696...5,625,601 		JBrowse link
G Daxx death domain associated protein ISO RGD PMID:21572393 RGD:9587767 NCBI chrNW_004624754:23,504,465...23,509,034
Ensembl chrNW_004624754:23,505,386...23,509,241 		JBrowse link
G Edn1 endothelin 1 ISO RGD PMID:22301113 RGD:8662301 NCBI chrNW_004624756:13,842,482...13,849,003
Ensembl chrNW_004624756:13,842,164...13,849,029 		JBrowse link
G Eprs1 glutamyl-prolyl-tRNA synthetase 1 involved_in ISO (PMID:15479637) UniProt PMID:15479637 NCBI chrNW_004624835:3,635,829...3,695,875
Ensembl chrNW_004624835:3,635,457...3,695,909 		JBrowse link
G Evl Enah/Vasp-like acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624734:3,926,939...4,023,841
Ensembl chrNW_004624734:3,927,004...4,071,621 		JBrowse link
G Fas Fas cell surface death receptor ISO RGD PMID:10029626 RGD:14700709 NCBI chrNW_004624791:15,290,022...15,315,848
Ensembl chrNW_004624791:15,289,348...15,315,848 		JBrowse link
G Faslg Fas ligand ISO RGD PMID:10029626 RGD:14700709 NCBI chrNW_004624771:9,031,978...9,038,760
Ensembl chrNW_004624771:9,032,016...9,038,825 		JBrowse link
G Flnb filamin B acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624821:691,291...835,244
Ensembl chrNW_004624821:691,272...836,322 		JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624860:3,257,805...3,261,736
Ensembl chrNW_004624860:3,257,853...3,261,735 		JBrowse link
G Gbp5 guanylate binding protein 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18025219) UniProt
MGI		 PMID:18025219 GO_REF:0000117 NCBI chrNW_004624742:8,324,902...8,335,965 JBrowse link
G Gsn gelsolin acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624760:13,943,680...14,004,660
Ensembl chrNW_004624760:13,943,888...13,969,905 		JBrowse link
G Icam1 intercellular adhesion molecule 1 ISO RGD PMID:7865494 RGD:11520781 NCBI chrNW_004624828:2,432,584...2,451,997
Ensembl chrNW_004624828:2,432,550...2,453,071 		JBrowse link
G Il12b interleukin 12B involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18025219) Ensembl
MGI		 PMID:18025219 GO_REF:0000107 NCBI chrNW_004624733:30,146,050...30,156,144
Ensembl chrNW_004624733:30,146,050...30,154,589 		JBrowse link
G Il12rb1 interleukin 12 receptor subunit beta 1 involved_in ISO (PMID:12023369) BHF-UCL PMID:12023369 NCBI chrNW_004624908:1,472,059...1,481,423 JBrowse link
G Il18 interleukin 18 ISO RGD PMID:18547159 RGD:4889457 NCBI chrNW_004624784:7,294,286...7,312,959
Ensembl chrNW_004624784:7,294,183...7,304,687 		JBrowse link
G Irf1 interferon regulatory factor 1 ISO RGD PMID:21261980 RGD:5128727 NCBI chrNW_004624733:39,596,565...39,603,428
Ensembl chrNW_004624733:39,596,501...39,603,526 		JBrowse link
G Irf8 interferon regulatory factor 8 involved_in ISO (PMID:25122610) UniProt
RGD		 PMID:21261980 PMID:25122610 RGD:5128727 NCBI chrNW_004624746:2,272,385...2,290,400
Ensembl chrNW_004624746:2,272,389...2,290,455 		JBrowse link
G Irgm immunity related GTPase M acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Kif16b kinesin family member 16B acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624741:17,424,335...17,750,531 JBrowse link
G Kif5b kinesin family member 5B acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624805:4,464,538...4,514,784
Ensembl chrNW_004624805:4,465,235...4,514,870 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:23817958) UniProt PMID:23817958 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G LOC101698177 guanylate-binding protein 6 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624742:8,336,898...8,383,334
Ensembl chrNW_004624742:8,366,651...8,384,618 		JBrowse link
G LOC101698463 HLA class II histocompatibility antigen, DP alpha 1 chain involved_in ISO (PMID:8568247) UniProt PMID:8568247 NCBI chrNW_004624754:23,674,935...23,683,044
Ensembl chrNW_004624754:23,674,448...23,683,662 		JBrowse link
G LOC101698564 guanylate-binding protein 5 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624742:8,426,088...8,441,480 JBrowse link
G LOC101698926 guanylate-binding protein 4 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624742:8,478,930...8,499,218 JBrowse link
G LOC101699770 guanylate-binding protein 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624742:8,543,804...8,564,944
Ensembl chrNW_004624742:8,543,688...8,594,728 		JBrowse link
G LOC101700852 guanylate-binding protein 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624742:8,581,575...8,595,931 JBrowse link
G LOC101703821 HLA class II histocompatibility antigen, DQ beta 1 chain involved_in ISO (MGI:4942269|PMID:9244347), (MGI:4942274|PMID:7691725), (MGI:4942276|PMID:2502420), (MGI:4942277|PMID:2493384), (MGI:4943415|PMID:1845803) BHF-UCL PMID:1845803 PMID:2493384 PMID:2502420 PMID:7691725 PMID:9244347 MGI:4942269 MGI:4942274 MGI:4942276 MGI:4942277 MGI:4943415 NCBI chrNW_004624754:23,895,509...23,902,487
Ensembl chrNW_004624754:23,895,607...23,906,713 		JBrowse link
G Mrc1 mannose receptor C-type 1 acts_upstream_of_or_within ISO (PMID:22832163) MGI PMID:22832163 NCBI chrNW_004624796:10,041,483...10,184,458
Ensembl chrNW_004624796:10,145,610...10,180,671
Ensembl chrNW_004624796:10,145,610...10,180,671 		JBrowse link
G Mst1 macrophage stimulating 1 ISO RGD PMID:21572393 RGD:9587767 NCBI chrNW_004624730:3,612,467...3,617,257
Ensembl chrNW_004624730:3,610,241...3,617,530 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO RGD PMID:7524476 RGD:10059620 NCBI chrNW_004624735:27,780,338...27,784,714
Ensembl chrNW_004624735:27,780,037...27,784,806 		JBrowse link
G Myo18a myosin XVIIIA acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624786:1,626,555...1,726,204
Ensembl chrNW_004624786:1,629,949...1,715,031 		JBrowse link
G Myo1c myosin IC acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624786:4,188,143...4,211,712
Ensembl chrNW_004624786:4,188,143...4,211,732 		JBrowse link
G Nos2 nitric oxide synthase 2 acts_upstream_of_or_within ISO (PMID:18025219) MGI PMID:18025219 NCBI chrNW_004624786:491,944...530,427
Ensembl chrNW_004624786:489,311...528,271 		JBrowse link
G Pde12 phosphodiesterase 12 involved_in ISO (PMID:15231837) UniProt PMID:15231837 NCBI chrNW_004624821:306,055...311,101
Ensembl chrNW_004624821:305,864...313,881 		JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 ISO RGD PMID:18466611 RGD:2311658 NCBI chrNW_004624870:33,293...122,536 JBrowse link
G Pim1 Pim-1 proto-oncogene, serine/threonine kinase involved_in ISO (PMID:37797010) UniProt PMID:37797010 NCBI chrNW_004624754:20,810,398...20,815,182
Ensembl chrNW_004624754:20,808,701...20,815,206 		JBrowse link
G Rab11fip5 RAB11 family interacting protein 5 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624762:524,065...561,558 JBrowse link
G Rab12 RAB12, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624770:17,636,031...17,654,863
Ensembl chrNW_004624770:17,635,901...17,653,919 		JBrowse link
G Rab20 RAB20, member RAS oncogene family involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chrNW_004624793:2,180,803...2,199,420
Ensembl chrNW_004624793:2,180,419...2,198,962 		JBrowse link
G Rab43 RAB43, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624943:991,802...1,024,434
Ensembl chrNW_004624943:991,682...1,024,434 		JBrowse link
G Rab7b RAB7B, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624807:5,307,361...5,334,578
Ensembl chrNW_004624807:5,307,440...5,334,945 		JBrowse link
G Rpl13a ribosomal protein L13a involved_in ISO (MGI:5466658|PMID:23071094)
(PMID:15479637)		 UniProt PMID:15479637 PMID:23071094 MGI:5466658 NCBI chrNW_004624832:4,728,298...4,732,397
Ensembl chrNW_004624832:4,727,899...4,732,367 		JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624871:1,667,292...1,705,550
Ensembl chrNW_004624871:1,667,291...1,702,783 		JBrowse link
G Sirpa signal regulatory protein alpha involved_in ISO PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chrNW_004624741:3,157,734...3,202,018 JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in ISO (PMID:18655181) UniProt PMID:18655181 NCBI chrNW_004624730:2,639,940...2,649,358
Ensembl chrNW_004624730:2,640,208...2,649,203 		JBrowse link
G Slk STE20 like kinase ISO RGD PMID:21572393 RGD:9587767 NCBI chrNW_004624831:3,076,548...3,144,107
Ensembl chrNW_004624831:3,076,856...3,142,289 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 ISO RGD PMID:10707961 RGD:151232287 NCBI chrNW_004624824:8,444,877...8,446,628 JBrowse link
G Socs3 suppressor of cytokine signaling 3 ISO RGD PMID:10707961 RGD:151232287 NCBI chrNW_004624801:7,841,230...7,843,912
Ensembl chrNW_004624801:7,840,889...7,843,860 		JBrowse link
G Star steroidogenic acute regulatory protein ISO RGD PMID:9564825 RGD:4891971 NCBI chrNW_004624780:5,494,430...5,501,063
Ensembl chrNW_004624780:5,493,786...5,502,030 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 involved_in ISO (PMID:11972023), (PMID:23386060) UniProt PMID:11972023 PMID:23386060 NCBI chrNW_004624854:5,067,578...5,106,052
Ensembl chrNW_004624854:5,067,535...5,102,106 		JBrowse link
G Stx11 syntaxin 11 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624753:10,150,811...10,180,794
Ensembl chrNW_004624753:10,148,416...10,191,153 		JBrowse link
G Stx4 syntaxin 4 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624782:14,094,727...14,101,210
Ensembl chrNW_004624782:14,090,850...14,105,058 		JBrowse link
G Stx8 syntaxin 8 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624786:11,712,667...11,992,201 JBrowse link
G Stxbp1 syntaxin binding protein 1 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624760:7,843,741...7,914,444
Ensembl chrNW_004624760:7,842,640...7,914,484 		JBrowse link
G Stxbp2 syntaxin binding protein 2 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624828:718,728...725,063
Ensembl chrNW_004624828:718,485...725,483 		JBrowse link
G Stxbp3 syntaxin binding protein 3 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19144319) Ensembl
MGI		 PMID:19144319 GO_REF:0000107 NCBI chrNW_004624772:4,540,518...4,589,562
Ensembl chrNW_004624772:4,540,450...4,589,896 		JBrowse link
G Stxbp4 syntaxin binding protein 4 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624795:10,255,874...10,497,486
Ensembl chrNW_004624795:10,271,351...10,420,153 		JBrowse link
G Syncrip synaptotagmin binding cytoplasmic RNA interacting protein involved_in ISO (PMID:15479637) UniProt PMID:15479637 NCBI chrNW_004624799:8,616,787...8,657,466
Ensembl chrNW_004624799:8,616,808...8,652,923 		JBrowse link
G Tlr2 toll like receptor 2 involved_in ISO (PMID:11672593) UniProt PMID:11672593 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
G Tlr3 toll like receptor 3 NOT ISO intestinal epithelial cells
thyrocytes		 RGD PMID:15661832 PMID:16638093 RGD:5128794 RGD:5128798 NCBI chrNW_004624769:16,925,969...16,945,250
Ensembl chrNW_004624769:16,925,984...16,941,196 		JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO (MGI:7387167|PMID:29849090) RGD
BHF-UCL		 PMID:16525716 PMID:29849090 MGI:7387167 RGD:14985246 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531 		JBrowse link
G Vamp3 vesicle associated membrane protein 3 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624818:4,010,130...4,019,695
Ensembl chrNW_004624818:4,009,991...4,019,728 		JBrowse link
G Vamp4 vesicle associated membrane protein 4 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624771:9,986,835...10,034,112 JBrowse link
G Vamp8 vesicle associated membrane protein 8 acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624749:17,558,429...17,562,765
Ensembl chrNW_004624749:17,558,429...17,562,723 		JBrowse link
G Vim vimentin acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624796:10,624,672...10,632,300
Ensembl chrNW_004624796:10,623,929...10,632,600 		JBrowse link
G Vps26b VPS26, retromer complex component B acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624812:8,783,350...8,804,755
Ensembl chrNW_004624812:8,783,378...8,804,753 		JBrowse link
G Was WASP actin nucleation promoting factor acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624893:453,793...493,696
Ensembl chrNW_004624893:487,396...493,482 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:18174455) UniProt PMID:18174455 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288 		JBrowse link
G Zyx zyxin acts_upstream_of_or_within ISO (PMID:19144319) MGI PMID:19144319 NCBI chrNW_004624800:11,380,787...11,389,418
Ensembl chrNW_004624800:11,381,178...11,389,271 		JBrowse link
cGAS/STING signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:32911482), (PMID:32912999), (PMID:33542149), (PMID:35322803), (PMID:35438208), (PMID:35460603) UniProt PMID:32911482 PMID:32912999 PMID:33542149 PMID:35322803 PMID:35438208 More... NCBI chrNW_004624819:587,739...680,618
Ensembl chrNW_004624819:643,045...680,684 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO (MGI:7548257|PMID:37832545)
(PMID:25636800), (PMID:30842659), (PMID:30842662), (PMID:35388221), (PMID:37832545)		 UniProt PMID:25636800 PMID:30842659 PMID:30842662 PMID:35388221 PMID:37832545 MGI:7548257 NCBI chrNW_004624743:32,277,197...32,283,346
Ensembl chrNW_004624743:32,273,385...32,283,235 		JBrowse link
complement activation, alternative pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C3 complement C3 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624828:3,773,816...3,798,077
Ensembl chrNW_004624828:3,770,221...3,797,946 		JBrowse link
G C8a complement C8 alpha chain involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624862:3,234,826...3,288,574
Ensembl chrNW_004624862:3,232,463...3,288,640 		JBrowse link
G C9 complement C9 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624759:15,534,743...15,623,767
Ensembl chrNW_004624759:15,534,660...15,624,381 		JBrowse link
G Cfb complement factor B acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:27564415)
(PMID:9238044)		 MGI
UniProt		 PMID:9238044 PMID:27564415 GO_REF:0000043 NCBI chrNW_004624754:24,310,344...24,316,482
Ensembl chrNW_004624754:24,310,247...24,317,366 		JBrowse link
G Cfd complement factor D acts_upstream_of_or_within ISO (PMID:27564415) MGI PMID:27564415 NCBI chrNW_004624828:7,714,926...7,717,139
Ensembl chrNW_004624828:7,711,537...7,717,337 		JBrowse link
G Cfh complement factor H acts_upstream_of_or_within_negative_effect ISO (PMID:19828624)
(PMID:27564415)		 MGI PMID:19828624 PMID:27564415 NCBI chrNW_004624798:3,332,549...3,414,435 JBrowse link
G Cfp complement factor properdin involved_in ISO (PMID:18292556) MGI PMID:18292556 NCBI chrNW_004624978:180,352...194,467
Ensembl chrNW_004624978:184,286...190,970 		JBrowse link
G Cr2 complement C3d receptor 2 acts_upstream_of_or_within_negative_effect
involved_in		 ISO (PMID:19828624)
(PMID:11981823)		 MGI
ARUK-UCL		 PMID:11981823 PMID:19828624 NCBI chrNW_004624807:4,149,472...4,179,269
Ensembl chrNW_004624807:4,152,230...4,179,211 		JBrowse link
G LOC101710435 complement C5 involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624760:14,296,904...14,396,585
Ensembl chrNW_004624760:14,296,967...14,396,188 		JBrowse link
complement activation, lectin pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Colec10 collectin subfamily member 10 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624763:17,302,075...17,350,682
Ensembl chrNW_004624763:17,301,993...17,352,559 		JBrowse link
G Colec11 collectin subfamily member 11 involved_in ISO (PMID:25912189)
(PMID:24174618)		 UniProt
ComplexPortal		 PMID:24174618 PMID:25912189 NCBI chrNW_004624846:5,173,292...5,185,036
Ensembl chrNW_004624846:5,173,292...5,182,471 		JBrowse link
G Fcn1 ficolin 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624760:2,743,996...2,751,116
Ensembl chrNW_004624760:2,743,996...2,751,110 		JBrowse link
G Fcn3 ficolin 3 involved_in ISO (PMID:11907111) ComplexPortal PMID:11907111 NCBI chrNW_004624764:11,265,740...11,269,588
Ensembl chrNW_004624764:11,265,505...11,269,650 		JBrowse link
G Krt1 keratin 1 involved_in ISO (PMID:11549596) UniProt PMID:11549596 NCBI chrNW_004624904:801,979...816,463
Ensembl chrNW_004624904:802,460...807,469 		JBrowse link
G LOC101716245 mannose-binding protein A-like involved_in IEA UniProt GO_REF:0000043 NCBI chrNW_004624841:6,895,594...6,899,930 JBrowse link
G Masp1 MBL associated serine protease 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:69,569,046...69,632,401
Ensembl chrNW_004624730:69,568,915...69,632,470 		JBrowse link
G Masp2 MBL associated serine protease 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624818:1,745,401...1,759,051 JBrowse link
G Mbl2 mannose binding lectin 2 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:15148336) MGI
UniProt		 PMID:15148336 GO_REF:0000043 NCBI chrNW_004624791:10,881,319...10,886,294
Ensembl chrNW_004624791:10,881,268...10,886,297 		JBrowse link
cytoplasmic pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alpk1 alpha kinase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624838:6,273,398...6,288,363
Ensembl chrNW_004624838:6,229,899...6,287,920 		JBrowse link
G Becn1 beclin 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:1,386,154...1,406,314
Ensembl chrNW_004624795:1,385,756...1,405,714 		JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:23258413) UniProt PMID:23258413 NCBI chrNW_004624819:587,739...680,618
Ensembl chrNW_004624819:643,045...680,684 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in ISO (PMID:19211564) UniProt PMID:19211564 NCBI chrNW_004624795:1,787,958...1,793,475
Ensembl chrNW_004624795:1,787,958...1,794,692 		JBrowse link
G Ipo5 importin 5 involved_in ISO (PMID:31340999) UniProt PMID:31340999 NCBI chrNW_004624793:12,971,397...13,004,126
Ensembl chrNW_004624793:12,969,459...13,004,139 		JBrowse link
G Irf3 interferon regulatory factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624832:4,611,445...4,616,319
Ensembl chrNW_004624832:4,612,374...4,616,276 		JBrowse link
G Irf7 interferon regulatory factor 7 involved_in ISO (PMID:21931555) UniProt PMID:21931555 NCBI chrNW_004624766:21,850,211...21,853,189 JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:16125763), (PMID:20451243) UniProt PMID:16125763 PMID:20451243 NCBI chrNW_004624741:4,936,556...4,951,081
Ensembl chrNW_004624741:4,939,040...4,954,058 		JBrowse link
G Rigi RNA sensor RIG-I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:37,134,718...37,204,543
Ensembl chrNW_004624736:37,133,059...37,197,218 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO (PMID:23910378), (PMID:35388221) UniProt PMID:23910378 PMID:35388221 NCBI chrNW_004624743:32,277,197...32,283,346
Ensembl chrNW_004624743:32,273,385...32,283,235 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in ISO (PMID:29441066) UniProt PMID:29441066 NCBI chrNW_004624802:3,861,821...3,914,061
Ensembl chrNW_004624802:3,862,709...3,914,028 		JBrowse link
G Tifa TRAF interacting protein with forkhead associated domain involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624838:6,160,712...6,167,408 JBrowse link
G Traf3ip3 TRAF3 interacting protein 3 involved_in ISO (PMID:31390091) UniProt PMID:31390091 NCBI chrNW_004624807:2,214,288...2,239,449
Ensembl chrNW_004624807:2,214,449...2,235,048 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO (PMID:20501938), (PMID:23015697) UniProt PMID:20501938 PMID:23015697 NCBI chrNW_004624767:10,729,766...10,803,253
Ensembl chrNW_004624767:10,729,413...10,748,455 		JBrowse link
G Trim25 tripartite motif containing 25 involved_in ISO (PMID:17392790) UniProt PMID:17392790 NCBI chrNW_004624795:11,967,908...11,986,707
Ensembl chrNW_004624795:11,971,610...11,986,608 		JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon involved_in ISO (PMID:22607805) UniProt PMID:22607805 NCBI chrNW_004624786:4,080,650...4,135,200
Ensembl chrNW_004624786:4,080,427...4,135,459 		JBrowse link
endolysosomal toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Washc4 WASH complex subunit 4 acts_upstream_of_or_within ISO (PMID:33749590) MGI PMID:33749590 NCBI chrNW_004624750:3,830,646...3,883,458 JBrowse link
induced systemic resistance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myd88 MYD88 innate immune signal transduction adaptor acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25084278) MGI
Ensembl		 PMID:25084278 GO_REF:0000107 NCBI chrNW_004624731:2,677,259...2,681,408
Ensembl chrNW_004624731:2,677,290...2,681,489 		JBrowse link
innate immune response in mucosa term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoa4 apolipoprotein A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624784:12,237,329...12,240,013
Ensembl chrNW_004624784:12,233,593...12,239,763 		JBrowse link
G Bpifb1 BPI fold containing family B member 1 involved_in ISO (PMID:21900486) UniProt PMID:21900486 NCBI chrNW_004624842:5,951,202...5,972,212
Ensembl chrNW_004624842:5,951,203...5,972,212 		JBrowse link
G Camp cathelicidin antimicrobial peptide involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chrNW_004624730:73,429,893...73,431,104 JBrowse link
G Defb1 defensin beta 1 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chrNW_004624861:4,710,687...4,718,867 JBrowse link
G Fau FAU ubiquitin like and ribosomal protein S30 fusion involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chrNW_004624767:21,280,329...21,282,496
Ensembl chrNW_004624767:21,280,388...21,282,496 		JBrowse link
G Il4 interleukin 4 involved_in ISO (MGI:5009207|PMID:9973465) BHF-UCL PMID:9973465 MGI:5009207 NCBI chrNW_004624733:39,412,800...39,420,079 JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:12037568) UniProt PMID:12037568 NCBI chrNW_004624730:74,636,554...74,656,817
Ensembl chrNW_004624730:74,636,522...74,656,886 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:15692051) MGI PMID:15692051 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:13,322,095...13,329,928
Ensembl chrNW_004624747:13,322,675...13,329,926 		JBrowse link
G Rpl39 ribosomal protein L39 involved_in ISO (PMID:12860195) UniProt PMID:12860195 NCBI chrNW_004624895:3,748,059...3,752,199 JBrowse link
innate immune response-activating signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr4 toll like receptor 4 ISO RGD PMID:19226379 RGD:2312509 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
MDA-5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifih1 interferon induced with helicase C domain 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624732:3,187,791...3,248,795
Ensembl chrNW_004624732:3,187,791...3,250,981 		JBrowse link
MyD88-dependent toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrfip2 LRR binding FLII interacting protein 2 acts_upstream_of_or_within ISO (PMID:19265123) MGI PMID:19265123 NCBI chrNW_004624788:15,158,920...15,294,785 JBrowse link
MyD88-dependent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:14660645) UniProt PMID:14660645 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Hspd1 heat shock protein family D (Hsp60) member 1 involved_in ISO (PMID:16148103) BHF-UCL PMID:16148103 NCBI chrNW_004624889:2,736,727...2,746,333 JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:12872135)
(PMID:12719478)
(PMID:14764662)		 Ensembl
MGI
InterPro		 PMID:12719478 PMID:12872135 PMID:14764662 GO_REF:0000002 GO_REF:0000107 NCBI chrNW_004624731:2,677,259...2,681,408
Ensembl chrNW_004624731:2,677,290...2,681,489 		JBrowse link
G Tlr2 toll like receptor 2 acts_upstream_of_or_within ISO (PMID:12719478) MGI PMID:12719478 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO (MGI:4438693|PMID:20037584)
(PMID:20037584)		 ARUK-UCL
ComplexPortal		 PMID:20037584 MGI:4438693 NCBI chrNW_004624840:7,323,022...7,349,334 JBrowse link
G Tnip1 TNFAIP3 interacting protein 1 involved_in ISO (MGI:5305352|PMID:22011580) UniProt PMID:22011580 MGI:5305352 NCBI chrNW_004624733:40,964,020...41,006,381 JBrowse link
MyD88-independent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lrrfip2 LRR binding FLII interacting protein 2 acts_upstream_of_or_within ISO (PMID:19265123) MGI PMID:19265123 NCBI chrNW_004624788:15,158,920...15,294,785 JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 acts_upstream_of_or_within ISO (PMID:12872135)
(PMID:12855817)		 MGI PMID:12855817 PMID:12872135 NCBI chrNW_004624828:4,964,199...4,973,465
Ensembl chrNW_004624828:4,971,093...4,973,198 		JBrowse link
G Tnip3 TNFAIP3 interacting protein 3 involved_in ISO (PMID:17088249) UniProt PMID:17088249 NCBI chrNW_004624777:1,124,389...1,222,450
Ensembl chrNW_004624777:1,124,204...1,158,324 		JBrowse link
natural killer cell degranulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Coro1a coronin 1A involved_in ISO (PMID:24760828) UniProt PMID:24760828 NCBI chrNW_004624782:13,106,416...13,111,394
Ensembl chrNW_004624782:13,105,153...13,111,357 		JBrowse link
G Fcgr3a Fc fragment of IgG receptor IIIa involved_in ISO (PMID:25786175), (PMID:28652325) UniProt PMID:25786175 PMID:28652325 NCBI chrNW_004624826:51,387...59,117 JBrowse link
G Nkg7 natural killer cell granule protein 7 involved_in ISO (MGI:6506882|PMID:32839608), (MGI:6810811|PMID:33911019) UniProt PMID:32839608 PMID:33911019 MGI:6506882 MGI:6810811 NCBI chrNW_004624832:3,501,924...3,502,750
Ensembl chrNW_004624832:3,501,973...3,504,773 		JBrowse link
G Rab27a RAB27A, member RAS oncogene family acts_upstream_of_or_within ISO (PMID:11266473) MGI PMID:11266473 NCBI chrNW_004624731:6,315,064...6,355,431
Ensembl chrNW_004624731:6,319,092...6,355,534 		JBrowse link
G Stx11 syntaxin 11 acts_upstream_of_or_within ISO (PMID:23042080), (PMID:23190531) MGI PMID:23042080 PMID:23190531 NCBI chrNW_004624753:10,150,811...10,180,794
Ensembl chrNW_004624753:10,148,416...10,191,153 		JBrowse link
G Unc13d unc-13 homolog D acts_upstream_of_or_within ISO (PMID:17420270) MGI PMID:17420270 NCBI chrNW_004624801:5,720,998...5,736,122
Ensembl chrNW_004624801:5,721,391...5,736,294 		JBrowse link
G Vamp2 vesicle associated membrane protein 2 NOT|involved_in ISO (PMID:18042464) UniProt PMID:18042464 NCBI chrNW_004624786:10,723,791...10,727,654
Ensembl chrNW_004624786:10,724,964...10,727,649 		JBrowse link
G Vamp7 vesicle associated membrane protein 7 involved_in ISO (PMID:18042464) UniProt PMID:18042464 NCBI chrNW_004624980:40,937...94,547
Ensembl chrNW_004624980:40,843...94,528 		JBrowse link
natural killer cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl8b ADP ribosylation factor like GTPase 8B involved_in ISO (PMID:24088571) UniProt PMID:24088571 NCBI chrNW_004624773:15,785,883...15,833,832
Ensembl chrNW_004624773:15,785,339...15,832,668 		JBrowse link
G Cd2 CD2 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:12,428,885...12,445,003
Ensembl chrNW_004624772:12,433,796...12,444,740 		JBrowse link
G Cebpg CCAAT enhancer binding protein gamma involved_in ISO (MGI:1350450|PMID:10587348) UniProt PMID:10587348 MGI:1350450 NCBI chrNW_004624794:9,727,616...9,736,729
Ensembl chrNW_004624794:9,729,876...9,736,516 		JBrowse link
G Fcgr3a Fc fragment of IgG receptor IIIa involved_in ISO (PMID:10318937), (PMID:23006327) UniProt PMID:10318937 PMID:23006327 NCBI chrNW_004624826:51,387...59,117 JBrowse link
G Grb2 growth factor receptor bound protein 2 involved_in ISO (PMID:16582911) UniProt PMID:16582911 NCBI chrNW_004624801:5,143,239...5,219,136
Ensembl chrNW_004624801:5,143,141...5,219,244 		JBrowse link
G Il18 interleukin 18 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:15843532) Ensembl
MGI		 PMID:15843532 GO_REF:0000107 NCBI chrNW_004624784:7,294,286...7,312,959
Ensembl chrNW_004624784:7,294,183...7,304,687 		JBrowse link
G Il21 interleukin 21 acts_upstream_of ISO (PMID:14764669) MGI PMID:14764669 NCBI chrNW_004624777:3,054,368...3,061,304
Ensembl chrNW_004624777:3,054,368...3,061,304 		JBrowse link
G Kif5b kinesin family member 5B involved_in ISO (PMID:24088571) UniProt PMID:24088571 NCBI chrNW_004624805:4,464,538...4,514,784
Ensembl chrNW_004624805:4,465,235...4,514,870 		JBrowse link
G Lag3 lymphocyte activating 3 acts_upstream_of ISO (PMID:8602528) MGI PMID:8602528 NCBI chrNW_004624860:3,454,587...3,461,649
Ensembl chrNW_004624860:3,456,347...3,461,592 		JBrowse link
G LOC101702156 granzyme B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624820:7,882,992...7,889,155
Ensembl chrNW_004624820:7,883,084...7,889,155 		JBrowse link
G LOC101707360 pleckstrin homology domain-containing family M member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:1,944,239...2,018,666
Ensembl chrNW_004624764:1,999,500...2,018,548
Ensembl chrNW_004624764:1,999,500...2,018,548 		JBrowse link
G Lyst lysosomal trafficking regulator involved_in ISO (PMID:10648412), (PMID:6154765) UniProt PMID:6154765 PMID:10648412 NCBI chrNW_004624775:14,670,498...14,900,501
Ensembl chrNW_004624775:14,705,693...14,898,660 		JBrowse link
G Nkg7 natural killer cell granule protein 7 involved_in ISO (MGI:6506882|PMID:32839608), (MGI:6810811|PMID:33911019) UniProt PMID:32839608 PMID:33911019 MGI:6506882 MGI:6810811 NCBI chrNW_004624832:3,501,924...3,502,750
Ensembl chrNW_004624832:3,501,973...3,504,773 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in ISO (PMID:16582911) UniProt PMID:16582911 NCBI chrNW_004624815:1,290,106...1,376,961
Ensembl chrNW_004624815:1,289,997...1,369,610 		JBrowse link
G Prdx1 peroxiredoxin 1 acts_upstream_of_or_within ISO (PMID:12891360) MGI PMID:12891360 NCBI chrNW_004624906:1,405,253...1,414,980
Ensembl chrNW_004624906:1,405,253...1,414,926 		JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:6971254) MGI
Ensembl		 PMID:6971254 GO_REF:0000107 NCBI chrNW_004624860:3,580,225...3,595,403
Ensembl chrNW_004624860:3,580,560...3,595,090 		JBrowse link
G Rnf19b ring finger protein 19B acts_upstream_of_or_within ISO (PMID:19915045) MGI PMID:19915045 NCBI chrNW_004624764:16,025,398...16,048,151
Ensembl chrNW_004624764:16,025,741...16,047,966 		JBrowse link
G Sh2d1a SH2 domain containing 1A acts_upstream_of ISO (PMID:16127454)
(PMID:19648922)		 MGI PMID:16127454 PMID:19648922 NCBI chrNW_004624797:3,120,123...3,142,564
Ensembl chrNW_004624797:3,120,123...3,142,564 		JBrowse link
G Sh2d1b SH2 domain containing 1B acts_upstream_of ISO (PMID:16127454)
(PMID:19648922)		 MGI PMID:16127454 PMID:19648922 NCBI chrNW_004624787:9,077,658...9,078,053 JBrowse link
G Stx11 syntaxin 11 acts_upstream_of_or_within ISO (PMID:23042080) MGI PMID:23042080 NCBI chrNW_004624753:10,150,811...10,180,794
Ensembl chrNW_004624753:10,148,416...10,191,153 		JBrowse link
G Vav1 vav guanine nucleotide exchange factor 1 involved_in ISO (PMID:16582911) UniProt PMID:16582911 NCBI chrNW_004624828:3,838,464...3,896,698
Ensembl chrNW_004624828:3,838,706...3,897,080 		JBrowse link
natural killer cell mediated cytotoxicity directed against tumor cell target term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nkg7 natural killer cell granule protein 7 involved_in ISO (MGI:6506882|PMID:32839608) UniProt PMID:32839608 MGI:6506882 NCBI chrNW_004624832:3,501,924...3,502,750
Ensembl chrNW_004624832:3,501,973...3,504,773 		JBrowse link
negative regulation of AIM2 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trim11 tripartite motif containing 11 involved_in ISO (PMID:27498865) UniProt PMID:27498865 NCBI chrNW_004624937:1,100,297...1,109,017
Ensembl chrNW_004624937:1,100,297...1,109,027 		JBrowse link
negative regulation of antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fam3a FAM3 metabolism regulating signaling molecule A involved_in ISO (PMID:18212107) UniProt PMID:18212107 NCBI chrNW_004624946:974,903...981,798
Ensembl chrNW_004624946:972,676...982,049 		JBrowse link
G Usp15 ubiquitin specific peptidase 15 involved_in ISO (PMID:33093067) UniProt PMID:33093067 NCBI chrNW_004624802:5,559,107...5,682,338
Ensembl chrNW_004624802:5,560,574...5,682,300 		JBrowse link
negative regulation of cGAS/STING signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624734:507,880...525,295
Ensembl chrNW_004624734:509,368...525,295 		JBrowse link
G Aurkb aurora kinase B involved_in ISO (PMID:33542149) UniProt PMID:33542149 NCBI chrNW_004624786:10,769,797...10,775,142
Ensembl chrNW_004624786:10,765,610...10,775,112 		JBrowse link
G Banf1 BAF nuclear assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:20,435,143...20,436,830
Ensembl chrNW_004624767:20,434,955...20,436,640 		JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:32911482), (PMID:32912999) UniProt PMID:32911482 PMID:32912999 NCBI chrNW_004624819:587,739...680,618
Ensembl chrNW_004624819:643,045...680,684 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:32715615) UniProt PMID:32715615 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Lyplal1 lysophospholipase like 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624835:3,023,151...3,052,826
Ensembl chrNW_004624835:3,022,311...3,052,724 		JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:35460603) UniProt PMID:35460603 NCBI chrNW_004624807:446,662...478,571
Ensembl chrNW_004624807:446,647...479,069 		JBrowse link
G Pcbp2 poly(rC) binding protein 2 involved_in ISO (PMID:35322803) UniProt PMID:35322803 NCBI chrNW_004624904:1,553,253...1,579,212
Ensembl chrNW_004624904:1,555,635...1,578,982 		JBrowse link
G Ppp6c protein phosphatase 6 catalytic subunit involved_in ISO (PMID:32474700) UniProt PMID:32474700 NCBI chrNW_004624760:10,025,102...10,073,164
Ensembl chrNW_004624760:10,024,575...10,074,329 		JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:33273464) UniProt PMID:33273464 NCBI chrNW_004624735:7,534,483...7,702,079
Ensembl chrNW_004624735:7,534,506...7,700,305 		JBrowse link
G Trex1 three prime repair exonuclease 1 involved_in ISO (PMID:33476576) UniProt PMID:33476576 NCBI chrNW_004624730:2,431,270...2,433,010
Ensembl chrNW_004624730:2,431,999...2,432,959 		JBrowse link
G Zdhhc18 zinc finger DHHC-type palmitoyltransferase 18 involved_in ISO (PMID:35438208) UniProt PMID:35438208 NCBI chrNW_004624764:10,822,540...10,853,842 JBrowse link
negative regulation of complement activation, alternative pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd46 CD46 molecule involved_in ISO (PMID:9029106) AgBase PMID:9029106 NCBI chrNW_004624807:4,040,639...4,074,631 JBrowse link
G Susd4 sushi domain containing 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624835:5,531,507...5,600,181
Ensembl chrNW_004624835:5,531,472...5,599,922 		JBrowse link
G Vsig4 V-set and immunoglobulin domain containing 4 involved_in ISO (PMID:17051150) UniProt PMID:17051150 NCBI chrNW_004624898:1,268,998...1,288,756
Ensembl chrNW_004624898:1,268,886...1,289,180 		JBrowse link
negative regulation of complement activation, lectin pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Serping1 serpin family G member 1 involved_in ISO (PMID:10946292) UniProt PMID:10946292 NCBI chrNW_004624864:3,091,397...3,103,084
Ensembl chrNW_004624864:3,091,083...3,103,090 		JBrowse link
negative regulation of cytoplasmic pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itch itchy E3 ubiquitin protein ligase involved_in ISO (PMID:27736772) UniProt PMID:27736772 NCBI chrNW_004624842:4,840,848...4,977,785
Ensembl chrNW_004624842:4,842,419...4,935,699 		JBrowse link
G Tarbp2 TARBP2 subunit of RISC loading complex involved_in ISO (PMID:30927622) UniProt PMID:30927622 NCBI chrNW_004624904:1,598,422...1,603,494
Ensembl chrNW_004624904:1,597,428...1,603,504 		JBrowse link
G Tax1bp1 Tax1 binding protein 1 involved_in ISO (PMID:27736772) UniProt PMID:27736772 NCBI chrNW_004624739:2,800,453...2,894,355
Ensembl chrNW_004624739:2,801,301...2,885,094 		JBrowse link
G Tspan6 tetraspanin 6 involved_in ISO (PMID:22908223) UniProt PMID:22908223 NCBI chrNW_004624902:1,977,700...1,985,004
Ensembl chrNW_004624902:1,978,467...1,986,303 		JBrowse link
negative regulation of innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (MGI:5490396|PMID:23609450) UniProt PMID:23609450 MGI:5490396 NCBI chrNW_004624751:23,478,263...23,488,834
Ensembl chrNW_004624751:23,478,096...23,483,521 		JBrowse link
G Atg12 autophagy related 12 involved_in ISO (MGI:3722754|PMID:17709747) ComplexPortal PMID:17709747 MGI:3722754 NCBI chrNW_004624733:6,046,073...6,056,321
Ensembl chrNW_004624733:6,045,432...6,060,784 		JBrowse link
G Atg5 autophagy related 5 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624780:15,987,483...16,124,158
Ensembl chrNW_004624780:15,987,397...16,124,151 		JBrowse link
G Aurkb aurora kinase B involved_in ISO (PMID:33542149) UniProt PMID:33542149 NCBI chrNW_004624786:10,769,797...10,775,142
Ensembl chrNW_004624786:10,765,610...10,775,112 		JBrowse link
G Banf1 BAF nuclear assembly factor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:20,435,143...20,436,830
Ensembl chrNW_004624767:20,434,955...20,436,640 		JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624828:6,313,165...6,322,837
Ensembl chrNW_004624828:6,313,867...6,322,764 		JBrowse link
G Cep63 centrosomal protein 63 involved_in ISO (PMID:35793002) UniProt PMID:35793002 NCBI chrNW_004624730:10,811,159...10,861,973
Ensembl chrNW_004624730:10,817,662...10,864,664 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in ISO (PMID:21525357)
(MGI:5318004|PMID:21525357)		 UniProt PMID:21525357 MGI:5318004 NCBI chrNW_004624795:1,787,958...1,793,475
Ensembl chrNW_004624795:1,787,958...1,794,692 		JBrowse link
G Drd2 dopamine receptor D2 involved_in ISO (MGI:5473736|PMID:23242137) CACAO PMID:23242137 MGI:5473736 NCBI chrNW_004624784:8,828,589...8,906,617
Ensembl chrNW_004624784:8,827,006...8,865,529 		JBrowse link
G Dtx4 deltex E3 ubiquitin ligase 4 involved_in ISO (PMID:27692986), (PMID:35793002) UniProt PMID:27692986 PMID:35793002 NCBI chrNW_004624864:1,475,383...1,502,047
Ensembl chrNW_004624864:1,478,059...1,498,066 		JBrowse link
G Grn granulin precursor involved_in ISO (MGI:4421471|PMID:20026663) UniProt PMID:20026663 MGI:4421471 NCBI chrNW_004624795:704,066...708,721
Ensembl chrNW_004624795:704,252...707,165 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5437532|PMID:22842346) UniProt PMID:22842346 MGI:5437532 NCBI chrNW_004624733:32,521,318...32,527,499 JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 involved_in ISO (MGI:2183694|PMID:12150927) BHF-UCL PMID:12150927 MGI:2183694 NCBI chrNW_004624802:2,042,486...2,098,921
Ensembl chrNW_004624802:2,047,409...2,098,545 		JBrowse link
G LOC101724812 C-C chemokine receptor type 1 involved_in ISO (MGI:4943412|PMID:15557190) BHF-UCL PMID:15557190 MGI:4943412 NCBI chrNW_004624730:74,822,848...74,828,614
Ensembl chrNW_004624730:74,826,659...74,827,726 		JBrowse link
G Lyar Ly1 antibody reactive involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624755:21,434,144...21,450,124 JBrowse link
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:5,560,071...5,566,763
Ensembl chrNW_004624764:5,557,560...5,586,964 		JBrowse link
G Nlrc3 NLR family CARD domain containing 3 involved_in ISO (MGI:5568884|PMID:24560620) UniProt PMID:24560620 MGI:5568884 NCBI chrNW_004624824:1,356,587...1,375,403
Ensembl chrNW_004624824:1,357,326...1,375,688 		JBrowse link
G Nlrx1 NLR family member X1 acts_upstream_of_or_within ISO (PMID:21703540) MGI PMID:21703540 NCBI chrNW_004624784:14,549,926...14,564,028
Ensembl chrNW_004624784:14,549,834...14,563,398 		JBrowse link
G Nmi N-myc and STAT interactor involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:23956435) Ensembl
MGI		 PMID:23956435 GO_REF:0000107 NCBI chrNW_004624866:4,230,258...4,263,156
Ensembl chrNW_004624866:4,229,535...4,263,688 		JBrowse link
G Parp1 poly(ADP-ribose) polymerase 1 involved_in ISO (PMID:32844745)
(MGI:7286108|PMID:35460603)
(PMID:35460603)		 UniProt PMID:32844745 PMID:35460603 MGI:7286108 NCBI chrNW_004624807:446,662...478,571
Ensembl chrNW_004624807:446,647...479,069 		JBrowse link
G Pim1 Pim-1 proto-oncogene, serine/threonine kinase involved_in ISO (PMID:37797010) UniProt PMID:37797010 NCBI chrNW_004624754:20,810,398...20,815,182
Ensembl chrNW_004624754:20,808,701...20,815,206 		JBrowse link
G Sfn stratifin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:10,859,556...10,860,876
Ensembl chrNW_004624764:10,859,667...10,860,413 		JBrowse link
G Trafd1 TRAF-type zinc finger domain containing 1 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624747:20,034,803...20,057,197 JBrowse link
G Trex1 three prime repair exonuclease 1 involved_in ISO (PMID:33476576) UniProt PMID:33476576 NCBI chrNW_004624730:2,431,270...2,433,010
Ensembl chrNW_004624730:2,431,999...2,432,959 		JBrowse link
G Trim21 tripartite motif containing 21 involved_in ISO (PMID:26342464) UniProt PMID:26342464 NCBI chrNW_004624817:5,643,788...5,651,514
Ensembl chrNW_004624817:5,639,779...5,653,361 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in ISO (MGI:3773763|PMID:18083102) UniProt PMID:18083102 MGI:3773763 NCBI chrNW_004624804:8,711,487...8,729,025
Ensembl chrNW_004624804:8,710,821...8,728,072 		JBrowse link
G Usp38 ubiquitin specific peptidase 38 involved_in ISO (PMID:27692986) UniProt PMID:27692986 NCBI chrNW_004624853:2,485,347...2,519,165
Ensembl chrNW_004624853:2,485,332...2,518,070 		JBrowse link
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta involved_in ISO (PMID:35662396) UniProt PMID:35662396 NCBI chrNW_004624763:7,722,275...7,723,482 JBrowse link
G Zdhhc18 zinc finger DHHC-type palmitoyltransferase 18 involved_in ISO (PMID:35438208) UniProt PMID:35438208 NCBI chrNW_004624764:10,822,540...10,853,842 JBrowse link
negative regulation of MDA-5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qbp complement C1q binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:9,239,119...9,243,617
Ensembl chrNW_004624786:9,239,177...9,243,961 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in ISO (PMID:21187438) UniProt PMID:21187438 NCBI chrNW_004624795:1,787,958...1,793,475
Ensembl chrNW_004624795:1,787,958...1,794,692 		JBrowse link
G Riok3 RIO kinase 3 involved_in ISO (PMID:25865883) UniProt PMID:25865883 NCBI chrNW_004624770:8,675,501...8,696,999
Ensembl chrNW_004624770:8,675,294...8,697,620 		JBrowse link
G Tkfc triokinase and FMN cyclase involved_in ISO (PMID:17600090) UniProt PMID:17600090 NCBI chrNW_004624926:862,339...870,936
Ensembl chrNW_004624926:862,339...869,926 		JBrowse link
negative regulation of MyD88-dependent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd300a CD300a molecule involved_in ISO (PMID:22043923) UniProt PMID:22043923 NCBI chrNW_004624801:4,404,376...4,420,836
Ensembl chrNW_004624801:4,404,262...4,421,097 		JBrowse link
G Cd300lf CD300 molecule like family member f involved_in ISO (PMID:22043923) UniProt PMID:22043923 NCBI chrNW_004624801:4,573,010...4,587,632
Ensembl chrNW_004624801:4,573,010...4,587,592 		JBrowse link
negative regulation of MyD88-independent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sarm1 sterile alpha and TIR motif containing 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624786:974,785...1,001,810
Ensembl chrNW_004624786:974,876...997,956 		JBrowse link
negative regulation of natural killer cell degranulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lgals9 galectin 9 involved_in ISO (MGI:5491117|PMID:23408620) UniProt PMID:23408620 MGI:5491117 NCBI chrNW_004624786:478,048...491,086 JBrowse link
negative regulation of natural killer cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb2 arrestin beta 2 involved_in ISO (PMID:18604210) UniProt PMID:18604210 NCBI chrNW_004624786:8,568,102...8,576,445
Ensembl chrNW_004624786:8,568,198...8,577,914 		JBrowse link
G Clec12b C-type lectin domain family 12 member B involved_in ISO (PMID:17562706) UniProt PMID:17562706 NCBI chrNW_004624752:26,790,063...26,796,279 JBrowse link
G Crk CRK proto-oncogene, adaptor protein ISO RGD PMID:18835194 RGD:11568650 NCBI chrNW_004624786:4,153,783...4,177,611
Ensembl chrNW_004624786:4,153,889...4,177,716 		JBrowse link
G Gfer growth factor, augmenter of liver regeneration ISO RGD PMID:9021955 RGD:9685777 NCBI chrNW_004624913:273,126...276,353
Ensembl chrNW_004624913:273,705...275,693 		JBrowse link
G Igf2 insulin like growth factor 2 ISO RGD PMID:9021955 RGD:9685777 NCBI chrNW_004624767:14,969,977...14,997,577
Ensembl chrNW_004624767:14,969,866...14,979,026 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:23408620) UniProt PMID:23408620 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G Sh2d1b SH2 domain containing 1B acts_upstream_of_or_within ISO (PMID:16127454) MGI PMID:16127454 NCBI chrNW_004624787:9,077,658...9,078,053 JBrowse link
negative regulation of natural killer cell mediated cytotoxicity directed against tumor cell target term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5437532|PMID:22842346) UniProt PMID:22842346 MGI:5437532 NCBI chrNW_004624733:32,521,318...32,527,499 JBrowse link
G Tgfb1 transforming growth factor beta 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624907:162,567...175,696
Ensembl chrNW_004624907:161,569...176,605 		JBrowse link
negative regulation of NLRP3 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abhd17a abhydrolase domain containing 17A, depalmitoylase involved_in ISO (PMID:38092000) UniProt PMID:38092000 NCBI chrNW_004624828:6,915,126...6,923,433
Ensembl chrNW_004624828:6,917,061...6,923,433 		JBrowse link
G Cptp ceramide-1-phosphate transfer protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624818:8,283,925...8,287,410
Ensembl chrNW_004624818:8,283,926...8,287,274 		JBrowse link
G Csnk1a1 casein kinase 1 alpha 1 involved_in ISO (MGI:6787653|PMID:34615873) UniProt PMID:34615873 MGI:6787653 NCBI chrNW_004624774:8,815,021...8,862,657
Ensembl chrNW_004624774:8,815,023...8,862,878 		JBrowse link
G Fbxl2 F-box and leucine rich repeat protein 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624788:11,253,912...11,350,045
Ensembl chrNW_004624788:11,253,934...11,349,137 		JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624880:2,070,410...2,075,069
Ensembl chrNW_004624880:2,070,523...2,079,421 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (MGI:6282153|PMID:30612879)
(PMID:30612879)		 UniProt PMID:30612879 MGI:6282153 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Lamp2 lysosomal associated membrane protein 2 involved_in ISO (PMID:36586411) UniProt PMID:36586411 NCBI chrNW_004624931:297,864...343,314
Ensembl chrNW_004624931:298,328...343,915 		JBrowse link
G Mefv MEFV innate immunity regulator, pyrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624824:1,035,172...1,047,632
Ensembl chrNW_004624824:1,035,094...1,047,678 		JBrowse link
G Nlrc3 NLR family CARD domain containing 3 involved_in ISO (PMID:25277106) UniProt PMID:25277106 NCBI chrNW_004624824:1,356,587...1,375,403
Ensembl chrNW_004624824:1,357,326...1,375,688 		JBrowse link
G Sirt2 sirtuin 2 acts_upstream_of_or_within ISO (PMID:23502856) MGI PMID:23502856 NCBI chrNW_004624794:12,239,363...12,259,561
Ensembl chrNW_004624794:12,235,263...12,259,276 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 acts_upstream_of_or_within ISO (MGI:6391726|PMID:29887864)
(PMID:32514138)		 ARUK-UCL PMID:29887864 PMID:32514138 MGI:6391726 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231 		JBrowse link
G Zdhhc12 zinc finger DHHC-type palmitoyltransferase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:6,273,989...6,276,788
Ensembl chrNW_004624760:6,273,994...6,276,776 		JBrowse link
negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Erbin erbb2 interacting protein involved_in ISO (MGI:5640951|PMID:16203728)
(PMID:16203728)		 UniProt PMID:16203728 MGI:5640951 NCBI chrNW_004624815:3,765,261...3,901,309
Ensembl chrNW_004624815:3,768,207...3,852,815 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624772:9,472,869...9,552,751
Ensembl chrNW_004624772:9,472,913...9,550,990 		JBrowse link
G Znrf4 zinc and ring finger 4 involved_in ISO (PMID:28656966) UniProt PMID:28656966 NCBI chrNW_004624828:4,633,434...4,635,366 JBrowse link
negative regulation of respiratory burst involved in inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dusp10 dual specificity phosphatase 10 acts_upstream_of_or_within ISO (PMID:19696743) MGI PMID:19696743 NCBI chrNW_004624835:4,751,651...4,783,916
Ensembl chrNW_004624835:4,750,077...4,782,249 		JBrowse link
G Grn granulin precursor involved_in ISO (PMID:12526812) UniProt PMID:12526812 NCBI chrNW_004624795:704,066...708,721
Ensembl chrNW_004624795:704,252...707,165 		JBrowse link
G Ins insulin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:14,999,088...15,000,035
Ensembl chrNW_004624767:14,999,088...15,000,035 		JBrowse link
G Rps19 ribosomal protein S19 involved_in ISO (PMID:15750715) UniProt PMID:15750715 NCBI chrNW_004624907:811,069...818,218
Ensembl chrNW_004624907:810,984...818,614 		JBrowse link
G Slamf8 SLAM family member 8 acts_upstream_of_or_within ISO (PMID:25799045) MGI PMID:25799045 NCBI chrNW_004624794:1,418,727...1,428,836
Ensembl chrNW_004624794:1,418,228...1,429,561 		JBrowse link
negative regulation of RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C1qbp complement C1q binding protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:9,239,119...9,243,617
Ensembl chrNW_004624786:9,239,177...9,243,961 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624795:1,787,958...1,793,475
Ensembl chrNW_004624795:1,787,958...1,794,692 		JBrowse link
G Gpatch3 G-patch domain containing 3 involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624764:10,879,342...10,889,175
Ensembl chrNW_004624764:10,879,556...10,889,146 		JBrowse link
G Nlrx1 NLR family member X1 acts_upstream_of_or_within ISO (PMID:21703540) MGI PMID:21703540 NCBI chrNW_004624784:14,549,926...14,564,028
Ensembl chrNW_004624784:14,549,834...14,563,398 		JBrowse link
G Nploc4 NPL4 homolog, ubiquitin recognition factor involved_in ISO (PMID:26471729) UniProt PMID:26471729 NCBI chrNW_004624801:10,531,107...10,589,502
Ensembl chrNW_004624801:10,533,064...10,589,096 		JBrowse link
G Rnf125 ring finger protein 125 involved_in ISO (PMID:17460044), (PMID:26471729) UniProt PMID:17460044 PMID:26471729 NCBI chrNW_004624770:909,808...942,386 JBrowse link
G Sec14l1 SEC14 like lipid binding 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624801:6,890,278...6,942,724
Ensembl chrNW_004624801:6,890,134...6,945,443 		JBrowse link
G Ufd1 ubiquitin recognition factor in ER associated degradation 1 involved_in ISO (PMID:26471729) UniProt PMID:26471729 NCBI chrNW_004624747:110,090...132,145
Ensembl chrNW_004624747:110,090...132,097 		JBrowse link
negative regulation of toll-like receptor 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (MGI:5490396|PMID:23609450) UniProt PMID:23609450 MGI:5490396 NCBI chrNW_004624751:23,478,263...23,488,834
Ensembl chrNW_004624751:23,478,096...23,483,521 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in ISO (MGI:4456928|PMID:20385881) UniProt PMID:20385881 MGI:4456928 NCBI chrNW_004624886:4,029,318...4,168,797
Ensembl chrNW_004624886:4,027,178...4,168,902 		JBrowse link
G Mfhas1 multifunctional ROCO family signaling regulator 1 involved_in ISO (MGI:6162316|PMID:26599367)
(PMID:26599367)		 UniProt PMID:26599367 MGI:6162316 NCBI chrNW_004624839:4,908,861...5,000,218
Ensembl chrNW_004624839:4,908,639...5,000,677 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within ISO (PMID:15220916) MGI PMID:15220916 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO (PMID:22198949) ARUK-UCL PMID:22198949 NCBI chrNW_004624840:7,323,022...7,349,334 JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:6695864|PMID:31134514) ARUK-UCL PMID:31134514 MGI:6695864 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231 		JBrowse link
negative regulation of toll-like receptor 3 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:19865078) UniProt PMID:19865078 NCBI chrNW_004624869:1,326,605...1,337,195 JBrowse link
G Rnf170 ring finger protein 170 involved_in ISO (PMID:31076723) UniProt PMID:31076723 NCBI chrNW_004624780:67,160...127,620
Ensembl chrNW_004624780:66,049...126,383 		JBrowse link
G Ubqln1 ubiquilin 1 involved_in ISO (MGI:5619743|PMID:21695056) CACAO PMID:21695056 MGI:5619743 NCBI chrNW_004624809:6,434,842...6,487,442
Ensembl chrNW_004624809:6,436,658...6,487,251 		JBrowse link
negative regulation of toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (MGI:5490396|PMID:23609450) UniProt PMID:23609450 MGI:5490396 NCBI chrNW_004624751:23,478,263...23,488,834
Ensembl chrNW_004624751:23,478,096...23,483,521 		JBrowse link
G Bpifb1 BPI fold containing family B member 1 involved_in ISO (PMID:21900486) UniProt PMID:21900486 NCBI chrNW_004624842:5,951,202...5,972,212
Ensembl chrNW_004624842:5,951,203...5,972,212 		JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISO (PMID:19948740) UniProt PMID:19948740 NCBI chrNW_004624760:13,472,500...13,658,070
Ensembl chrNW_004624760:13,472,672...13,657,930 		JBrowse link
G LOC101722352 TIR domain-containing adapter molecule 2 involved_in ISO (PMID:19412184) UniProt PMID:19412184 NCBI chrNW_004624733:6,304,454...6,341,827 JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in ISO (MGI:4456928|PMID:20385881) UniProt PMID:20385881 MGI:4456928 NCBI chrNW_004624886:4,029,318...4,168,797
Ensembl chrNW_004624886:4,027,178...4,168,902 		JBrowse link
G Mfhas1 multifunctional ROCO family signaling regulator 1 involved_in ISO (PMID:28609714) UniProt PMID:28609714 NCBI chrNW_004624839:4,908,861...5,000,218
Ensembl chrNW_004624839:4,908,639...5,000,677 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1 group D member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624795:3,102,424...3,109,497
Ensembl chrNW_004624795:3,102,439...3,109,497 		JBrowse link
G Rab7b RAB7B, member RAS oncogene family involved_in ISO (MGI:3834524|PMID:17395780) UniProt PMID:17395780 MGI:3834524 NCBI chrNW_004624807:5,307,361...5,334,578
Ensembl chrNW_004624807:5,307,440...5,334,945 		JBrowse link
G Sqstm1 sequestosome 1 involved_in ISO (PMID:31281713) UniProt PMID:31281713 NCBI chrNW_004624733:42,689,454...42,700,916
Ensembl chrNW_004624733:42,691,841...42,700,916 		JBrowse link
G Tax1bp1 Tax1 binding protein 1 involved_in ISO (PMID:28898289) UniProt PMID:28898289 NCBI chrNW_004624739:2,800,453...2,894,355
Ensembl chrNW_004624739:2,801,301...2,885,094 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:6152919|PMID:29407460)
(MGI:6695864|PMID:31134514)		 ARUK-UCL PMID:29407460 PMID:31134514 MGI:6152919 MGI:6695864 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231 		JBrowse link
G Trim32 tripartite motif containing 32 involved_in ISO (PMID:28898289) UniProt PMID:28898289 NCBI chrNW_004624760:18,577,764...18,600,869
Ensembl chrNW_004624760:18,585,279...18,599,659 		JBrowse link
negative regulation of toll-like receptor 9 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gramd4 GRAM domain containing 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624752:3,328,132...3,401,027
Ensembl chrNW_004624752:3,330,905...3,400,977 		JBrowse link
G Ppt1 palmitoyl-protein thioesterase 1 involved_in ISO (PMID:14716310) UniProt PMID:14716310 NCBI chrNW_004624764:22,542,892...22,577,077
Ensembl chrNW_004624764:22,543,857...22,577,121 		JBrowse link
G Ptprs protein tyrosine phosphatase receptor type S involved_in ISO (PMID:26231120) UniProt PMID:26231120 NCBI chrNW_004624828:4,688,555...4,764,805
Ensembl chrNW_004624828:4,716,249...4,764,614 		JBrowse link
G Rab7b RAB7B, member RAS oncogene family involved_in ISO (MGI:4355098|PMID:19587007) UniProt PMID:19587007 MGI:4355098 NCBI chrNW_004624807:5,307,361...5,334,578
Ensembl chrNW_004624807:5,307,440...5,334,945 		JBrowse link
negative regulation of toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb2 arrestin beta 2 involved_in ISO (MGI:3662828|PMID:16378096) UniProt PMID:16378096 MGI:3662828 NCBI chrNW_004624786:8,568,102...8,576,445
Ensembl chrNW_004624786:8,568,198...8,577,914 		JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) UniProt PMID:20829348 NCBI chrNW_004624828:6,313,165...6,322,837
Ensembl chrNW_004624828:6,313,867...6,322,764 		JBrowse link
G Gpr108 G protein-coupled receptor 108 involved_in ISO (MGI:6220977|PMID:30332431) UniProt PMID:30332431 MGI:6220977 NCBI chrNW_004624828:3,805,151...3,812,113
Ensembl chrNW_004624828:3,805,366...3,812,055 		JBrowse link
G Gps2 G protein pathway suppressor 2 involved_in ISO (MGI:5896692|PMID:28039360) UniProt PMID:28039360 MGI:5896692 NCBI chrNW_004624786:9,938,384...9,941,210
Ensembl chrNW_004624786:9,938,384...9,941,235 		JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 involved_in ISO (MGI:2183694|PMID:12150927) BHF-UCL PMID:12150927 MGI:2183694 NCBI chrNW_004624802:2,042,486...2,098,921
Ensembl chrNW_004624802:2,047,409...2,098,545 		JBrowse link
G Irf4 interferon regulatory factor 4 acts_upstream_of_or_within ISO (PMID:16236719) MGI PMID:16236719 NCBI chrNW_004624756:23,917,111...23,931,482
Ensembl chrNW_004624756:23,918,323...23,931,501 		JBrowse link
G Lgr4 leucine rich repeat containing G protein-coupled receptor 4 involved_in ISO (MGI:5499954|PMID:23589304) UniProt PMID:23589304 MGI:5499954 NCBI chrNW_004624766:17,110,809...17,147,585
Ensembl chrNW_004624766:17,112,909...17,147,785 		JBrowse link
G Lrrc14 leucine rich repeat containing 14 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624735:12,337,564...12,345,260 JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:24,639,757...24,652,059
Ensembl chrNW_004624754:24,639,860...24,649,968 		JBrowse link
G Nlrp6 NLR family pyrin domain containing 6 acts_upstream_of_or_within ISO (PMID:22763455) MGI PMID:22763455 NCBI chrNW_004624766:22,143,405...22,150,903 JBrowse link
G Otud4 OTU deubiquitinase 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624853:4,091,591...4,145,344
Ensembl chrNW_004624853:4,091,316...4,140,201 		JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase 1 involved_in ISO (MGI:4821539|PMID:20584979) UniProt PMID:20584979 MGI:4821539 NCBI chrNW_004624824:279,893...383,220
Ensembl chrNW_004624824:293,374...383,156 		JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in ISO (MGI:5487531|PMID:20728433) UniProt PMID:20728433 MGI:5487531 NCBI chrNW_004624737:8,021,478...8,154,543
Ensembl chrNW_004624737:8,022,836...8,154,422 		JBrowse link
G Rnf115 ring finger protein 115 involved_in ISO (PMID:35343654) UniProt PMID:35343654 NCBI chrNW_004624772:17,099,593...17,196,258
Ensembl chrNW_004624772:17,104,189...17,196,326 		JBrowse link
G Smpdl3b sphingomyelin phosphodiesterase acid like 3B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:11,785,739...11,807,351
Ensembl chrNW_004624764:11,785,640...11,807,084 		JBrowse link
G Tyro3 TYRO3 protein tyrosine kinase involved_in ISO (MGI:3773763|PMID:18083102) UniProt PMID:18083102 MGI:3773763 NCBI chrNW_004624804:8,711,487...8,729,025
Ensembl chrNW_004624804:8,710,821...8,728,072 		JBrowse link
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon involved_in ISO (PMID:35343654) UniProt PMID:35343654 NCBI chrNW_004624786:4,080,650...4,135,200
Ensembl chrNW_004624786:4,080,427...4,135,459 		JBrowse link
negative regulation of type I interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adar adenosine deaminase RNA specific involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19060901) Ensembl
MGI		 PMID:19060901 GO_REF:0000107 NCBI chrNW_004624885:2,783,058...2,839,688
Ensembl chrNW_004624885:2,812,448...2,839,693 		JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) UniProt PMID:20829348 NCBI chrNW_004624828:6,313,165...6,322,837
Ensembl chrNW_004624828:6,313,867...6,322,764 		JBrowse link
G Cnot7 CCR4-NOT transcription complex subunit 7 involved_in ISO (PMID:23386060) UniProt PMID:23386060 NCBI chrNW_004624769:22,047,177...22,065,314
Ensembl chrNW_004624769:22,046,526...22,065,339 		JBrowse link
G Dcst1 DC-STAMP domain containing 1 involved_in ISO (PMID:27782195) UniProt PMID:27782195 NCBI chrNW_004624885:2,451,247...2,465,459
Ensembl chrNW_004624885:2,451,404...2,465,397 		JBrowse link
G Eif4e2 eukaryotic translation initiation factor 4E family member 2 involved_in ISO (PMID:35878012) UniProt PMID:35878012 NCBI chrNW_004624843:5,303,157...5,332,228
Ensembl chrNW_004624843:5,303,172...5,332,228 		JBrowse link
G Gigyf2 GRB10 interacting GYF protein 2 involved_in ISO (PMID:35878012) UniProt PMID:35878012 NCBI chrNW_004624843:5,391,725...5,538,980
Ensembl chrNW_004624843:5,420,352...5,537,217 		JBrowse link
G Isg15 ISG15 ubiquitin like modifier involved_in ISO (PMID:28724761) ARUK-UCL PMID:28724761 NCBI chrNW_004624818:8,510,657...8,511,749 JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:37656786) UniProt PMID:37656786 NCBI chrNW_004624741:4,936,556...4,951,081
Ensembl chrNW_004624741:4,939,040...4,954,058 		JBrowse link
G Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit involved_in ISO (PMID:30559377) UniProt PMID:30559377 NCBI chrNW_004624825:7,513,481...7,527,716
Ensembl chrNW_004624825:7,513,481...7,527,695 		JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624878:6,017...17,368
Ensembl chrNW_004624878:6,035...17,445 		JBrowse link
G Mul1 mitochondrial E3 ubiquitin protein ligase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:5,560,071...5,566,763
Ensembl chrNW_004624764:5,557,560...5,586,964 		JBrowse link
G Nlrc5 NLR family CARD domain containing 5 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624746:28,954,009...29,030,337
Ensembl chrNW_004624746:28,954,016...29,030,322 		JBrowse link
G Oas1 2'-5'-oligoadenylate synthetase 1 involved_in ISO (PMID:30078389) ARUK-UCL PMID:30078389 NCBI chrNW_004624747:19,428,994...19,434,512
Ensembl chrNW_004624747:19,428,833...19,434,550 		JBrowse link
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in ISO (MGI:3691503|PMID:11909529), (MGI:5493216|PMID:12138178)
(PMID:11909529)		 UniProt PMID:11909529 PMID:12138178 MGI:3691503 MGI:5493216 NCBI chrNW_004624770:19,808,400...19,877,494
Ensembl chrNW_004624770:19,808,400...19,876,503 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in ISO (PMID:29670289)
(MGI:5521417|PMID:23972988)		 UniProt PMID:23972988 PMID:29670289 MGI:5521417 NCBI chrNW_004624842:2,591,016...2,649,746
Ensembl chrNW_004624842:2,591,148...2,647,742 		JBrowse link
G Stat2 signal transducer and activator of transcription 2 involved_in ISO (MGI:6508512|PMID:28165510)
(PMID:28165510)		 UniProt PMID:28165510 MGI:6508512 NCBI chrNW_004624802:11,645,851...11,662,812
Ensembl chrNW_004624802:11,648,020...11,660,216 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:18724932) MGI PMID:18724932 NCBI chrNW_004624730:2,431,270...2,433,010
Ensembl chrNW_004624730:2,431,999...2,432,959 		JBrowse link
G Ttll12 tubulin tyrosine ligase like 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624752:5,796,935...5,813,078
Ensembl chrNW_004624752:5,796,958...5,813,075 		JBrowse link
G Usp18 ubiquitin specific peptidase 18 involved_in ISO (PMID:28165510) UniProt PMID:28165510 NCBI chrNW_004624735:9,158,597...9,187,503 JBrowse link
G Ythdf2 YTH N6-methyladenosine RNA binding protein F2 involved_in ISO (PMID:30559377) UniProt PMID:30559377 NCBI chrNW_004624764:12,533,317...12,567,514
Ensembl chrNW_004624764:12,533,257...12,567,514 		JBrowse link
G Ythdf3 YTH N6-methyladenosine RNA binding protein F3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624744:28,558,988...28,597,302
Ensembl chrNW_004624744:28,558,209...28,597,065 		JBrowse link
negative regulation of type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 involved_in ISO (PMID:16709924) UniProt PMID:16709924 NCBI chrNW_004624753:5,737,720...5,749,313
Ensembl chrNW_004624753:5,737,237...5,752,966 		JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 involved_in ISO (PMID:11679576) UniProt PMID:11679576 NCBI chrNW_004624824:2,215,337...2,259,696
Ensembl chrNW_004624824:2,214,240...2,259,696 		JBrowse link
G Otop1 otopetrin 1 involved_in ISO (MGI:5750846|PMID:24379350) UniProt PMID:24379350 MGI:5750846 NCBI chrNW_004624755:21,377,288...21,403,621
Ensembl chrNW_004624755:21,377,721...21,403,621 		JBrowse link
G Parp14 poly(ADP-ribose) polymerase family member 14 involved_in ISO (PMID:27796300)
(MGI:5905929|PMID:27796300)		 UniProt PMID:27796300 MGI:5905929 NCBI chrNW_004624912:969,144...1,022,506
Ensembl chrNW_004624912:969,236...1,023,564 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma involved_in ISO (PMID:21268089) BHF-UCL PMID:21268089 NCBI chrNW_004624956:84,673...207,176
Ensembl chrNW_004624956:83,842...149,481 		JBrowse link
G Ptpn2 protein tyrosine phosphatase non-receptor type 2 involved_in
NOT|involved_in		 ISO (PMID:12138178)
(MGI:5493216|PMID:12138178)		 UniProt PMID:12138178 MGI:5493216 NCBI chrNW_004624770:19,808,400...19,877,494
Ensembl chrNW_004624770:19,808,400...19,876,503 		JBrowse link
NLRP3 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atat1 alpha tubulin acetyltransferase 1 acts_upstream_of ISO (PMID:23502856) MGI PMID:23502856 NCBI chrNW_004624754:25,058,312...25,069,052
Ensembl chrNW_004624754:25,058,204...25,069,561 		JBrowse link
G Kcnj8 potassium inwardly rectifying channel subfamily J member 8 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:28928055) MGI
Ensembl		 PMID:28928055 GO_REF:0000107 NCBI chrNW_004624752:16,939,289...16,945,692
Ensembl chrNW_004624752:16,939,384...16,946,723 		JBrowse link
G Nlrp3 NLR family pyrin domain containing 3 involved_in
acts_upstream_of_or_within		 ISO (MGI:5492224|PMID:23582325), (MGI:5792478|PMID:27043286), (MGI:5913002|PMID:28716882), (MGI:5921465|PMID:28656979), (MGI:6106673|PMID:28943315), (MGI:6260219|PMID:30487600), (MGI:6787653|PMID:34615873), (MGI:6844859|PMID:34861190), (MGI:6859739|PMID:28465465), (PMID:26173909)
(PMID:17483456), (PMID:23582325), (PMID:25686105), (PMID:27043286), (PMID:27432880), (PMID:28465465), (PMID:28656979), (PMID:28943315), (PMID:30487600), (PMID:31189953), (PMID:33231615), (PMID:34554188), (PMID:34615873), (PMID:35114687), (PMID:35254907), (PMID:35559676), (PMID:36442502)
(PMID:22753929)		 UniProt
MGI		 PMID:17483456 PMID:22753929 PMID:23582325 PMID:25686105 PMID:26173909 More... MGI:5492224 MGI:5792478 MGI:5913002 MGI:5921465 MGI:6106673 MGI:6260219 MGI:6787653 MGI:6844859 MGI:6859739 NCBI chrNW_004624937:564,191...584,470 JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (PMID:27432880) UniProt PMID:27432880 NCBI chrNW_004624782:14,247,333...14,249,861
Ensembl chrNW_004624782:14,247,864...14,249,000 		JBrowse link
G Sirt2 sirtuin 2 acts_upstream_of ISO (PMID:23502856) MGI PMID:23502856 NCBI chrNW_004624794:12,239,363...12,259,561
Ensembl chrNW_004624794:12,235,263...12,259,276 		JBrowse link
NLRP6 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nlrp6 NLR family pyrin domain containing 6 involved_in ISO (MGI:6706628|PMID:32424362), (MGI:6833928|PMID:34678144)
(PMID:30674671), (PMID:31932628), (PMID:34678144)		 UniProt PMID:30674671 PMID:31932628 PMID:32424362 PMID:34678144 MGI:6706628 MGI:6833928 NCBI chrNW_004624766:22,143,405...22,150,903 JBrowse link
nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf34 ring finger protein 34 involved_in ISO (PMID:25012219) UniProt PMID:25012219 NCBI chrNW_004624747:21,904,652...21,920,579
Ensembl chrNW_004624747:21,904,667...21,920,778 		JBrowse link
nucleotide-binding oligomerization domain containing 1 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfkbia NFKB inhibitor alpha acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18261938) MGI
Ensembl		 PMID:18261938 GO_REF:0000107 NCBI chrNW_004624838:1,384,337...1,387,602
Ensembl chrNW_004624838:1,384,204...1,390,205 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 involved_in ISO (MGI:6210191|PMID:27007849)
(PMID:11058605), (PMID:12791997), (PMID:12796777)		 UniProt PMID:11058605 PMID:12791997 PMID:12796777 PMID:27007849 MGI:6210191 NCBI chrNW_004624739:285,791...339,752
Ensembl chrNW_004624739:285,689...341,956 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 ISO (PMID:29452636), (PMID:30279485)
(PMID:11894098)		 UniProt
MGI		 PMID:11894098 PMID:29452636 PMID:30279485 NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890 		JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18261938) Ensembl
MGI		 PMID:18261938 GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
nucleotide-binding oligomerization domain containing 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Inava innate immunity activator involved_in ISO (PMID:28436939) UniProt PMID:28436939 NCBI chrNW_004624807:9,718,307...9,738,282
Ensembl chrNW_004624807:9,718,307...9,738,148 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (PMID:25891078) UniProt PMID:25891078 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Lacc1 laccase domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624748:11,150,678...11,194,794
Ensembl chrNW_004624748:11,187,316...11,194,841 		JBrowse link
G Nfkbia NFKB inhibitor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18261938) Ensembl
MGI		 PMID:18261938 GO_REF:0000107 NCBI chrNW_004624838:1,384,337...1,387,602
Ensembl chrNW_004624838:1,384,204...1,390,205 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of_or_within
involved_in		 ISO (PMID:12527755)
(PMID:23892723)
(PMID:12626759), (PMID:15044951), (PMID:17355968), (PMID:23806334), (PMID:31649195)
(MGI:6210191|PMID:27007849)
(MGI:3529429|PMID:15692052)		 MGI
UniProt		 PMID:12527755 PMID:12626759 PMID:15044951 PMID:15692052 PMID:17355968 More... MGI:3529429 MGI:6210191 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Otulin OTU deubiquitinase with linear linkage specificity involved_in ISO (PMID:23806334) UniProt PMID:23806334 NCBI chrNW_004624751:11,676,932...11,703,143
Ensembl chrNW_004624751:11,676,850...11,702,061 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:12527755) MGI
Ensembl		 PMID:12527755 GO_REF:0000107 NCBI chrNW_004624767:20,732,813...20,742,016
Ensembl chrNW_004624767:20,732,938...20,741,272 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:7484276|PMID:17947236)
(PMID:11894098)
(PMID:16824733), (PMID:17355968), (PMID:17562858), (PMID:23806334), (PMID:28545134), (PMID:29452636), (PMID:30026309), (PMID:30279485), (PMID:30478312)		 UniProt
MGI		 PMID:11894098 PMID:16824733 PMID:17355968 PMID:17562858 PMID:17947236 More... MGI:7484276 NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890 		JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of
involved_in		 ISO
IEA		 (PMID:18261938) MGI
Ensembl		 PMID:18261938 GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cgas cyclic GMP-AMP synthase involved_in ISO (PMID:23258413) UniProt PMID:23258413 NCBI chrNW_004624819:587,739...680,618
Ensembl chrNW_004624819:643,045...680,684 		JBrowse link
G Clec4e C-type lectin domain family 4 member E involved_in ISO (PMID:24101491) UniProt PMID:24101491 NCBI chrNW_004624860:4,108,782...4,113,693
Ensembl chrNW_004624860:4,108,640...4,113,839 		JBrowse link
G Inava innate immunity activator involved_in ISO (PMID:28436939) UniProt PMID:28436939 NCBI chrNW_004624807:9,718,307...9,738,282
Ensembl chrNW_004624807:9,718,307...9,738,148 		JBrowse link
G Lacc1 laccase domain containing 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624748:11,150,678...11,194,794
Ensembl chrNW_004624748:11,187,316...11,194,841 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 involved_in ISO (PMID:31649195) UniProt PMID:31649195 NCBI chrNW_004624739:285,791...339,752
Ensembl chrNW_004624739:285,689...341,956 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in ISO (PMID:31649195) UniProt PMID:31649195 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Rnf144a ring finger protein 144A involved_in ISO (PMID:37955227) UniProt PMID:37955227 NCBI chrNW_004624846:3,297,444...3,393,473
Ensembl chrNW_004624846:3,300,960...3,378,372 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO (PMID:23910378) UniProt PMID:23910378 NCBI chrNW_004624743:32,277,197...32,283,346
Ensembl chrNW_004624743:32,273,385...32,283,235 		JBrowse link
positive regulation of AIM2 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gbp5 guanylate binding protein 5 involved_in ISO (MGI:5774627|PMID:25774716), (MGI:5774628|PMID:25774715) UniProt PMID:25774715 PMID:25774716 MGI:5774627 MGI:5774628 NCBI chrNW_004624742:8,324,902...8,335,965 JBrowse link
positive regulation of antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pla2g5 phospholipase A2 group V involved_in ISO (MGI:3841317|PMID:19342668) UniProt PMID:19342668 MGI:3841317 NCBI chrNW_004624764:5,196,215...5,207,138
Ensembl chrNW_004624764:5,196,215...5,207,232 		JBrowse link
G Spi1 Spi-1 proto-oncogene involved_in ISO (MGI:6381024|PMID:30911105) ARUK-UCL PMID:30911105 MGI:6381024 NCBI chrNW_004624767:1,376,649...1,404,382
Ensembl chrNW_004624767:1,394,704...1,404,406 		JBrowse link
G Trim62 tripartite motif containing 62 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:16,200,539...16,230,713
Ensembl chrNW_004624764:16,200,539...16,230,780 		JBrowse link
positive regulation of cGAS/STING signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map3k7 mitogen-activated protein kinase kinase kinase 7 involved_in ISO (PMID:37832545) UniProt PMID:37832545 NCBI chrNW_004624799:3,554,644...3,623,317
Ensembl chrNW_004624799:3,554,678...3,622,289 		JBrowse link
G Slc19a1 solute carrier family 19 member 1 involved_in ISO (PMID:36745868) UniProt PMID:36745868 NCBI chrNW_004624745:30,793,114...30,811,944
Ensembl chrNW_004624745:30,794,024...30,811,944 		JBrowse link
G Tab1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 involved_in ISO (PMID:37832545) UniProt PMID:37832545 NCBI chrNW_004624752:8,912,467...8,937,313
Ensembl chrNW_004624752:8,913,900...8,937,329 		JBrowse link
G Zdhhc9 zinc finger DHHC-type palmitoyltransferase 9 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624797:9,027,316...9,060,321
Ensembl chrNW_004624797:9,023,833...9,060,855 		JBrowse link
positive regulation of innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam8 ADAM metallopeptidase domain 8 involved_in ISO (MGI:5009349|PMID:20683884) BHF-UCL PMID:20683884 MGI:5009349 NCBI chrNW_004624737:13,459,274...13,474,686 JBrowse link
G Akirin2 akirin 2 involved_in IEA Ensembl
TreeGrafter		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624799:6,620,102...6,644,286
Ensembl chrNW_004624799:6,625,549...6,644,286 		JBrowse link
G Card9 caspase recruitment domain family member 9 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:17187069) MGI
Ensembl		 PMID:17187069 GO_REF:0000107 NCBI chrNW_004624760:1,533,247...1,542,529
Ensembl chrNW_004624760:1,533,390...1,540,162 		JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A involved_in ISO (PMID:38016475) UniProt PMID:38016475 NCBI chrNW_004624767:18,109,011...18,161,378
Ensembl chrNW_004624767:18,109,008...18,161,639 		JBrowse link
G Dhx9 DExH-box helicase 9 involved_in ISO (MGI:5908739|PMID:28636595) UniProt PMID:28636595 MGI:5908739 NCBI chrNW_004624814:10,863,079...10,923,842
Ensembl chrNW_004624814:10,863,337...10,921,075 		JBrowse link
G Ereg epiregulin involved_in ISO (MGI:3604223|PMID:16182244) UniProt PMID:16182244 MGI:3604223 NCBI chrNW_004624730:1,339,017...1,353,869
Ensembl chrNW_004624730:1,339,518...1,353,429 		JBrowse link
G Fpr2 formyl peptide receptor 2 involved_in ISO (PMID:25505240) ARUK-UCL PMID:25505240 NCBI chrNW_004624832:3,275,365...3,282,308 JBrowse link
G Gbp5 guanylate binding protein 5 involved_in ISO (MGI:5319585|PMID:22461501) UniProt PMID:22461501 MGI:5319585 NCBI chrNW_004624742:8,324,902...8,335,965 JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:4839671|PMID:20937702) UniProt PMID:20937702 MGI:4839671 NCBI chrNW_004624733:32,521,318...32,527,499 JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:4367121|PMID:19890330) UniProt PMID:19890330 MGI:4367121 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO (MGI:4367121|PMID:19890330) UniProt PMID:19890330 MGI:4367121 NCBI chrNW_004624769:4,834,998...4,837,111 JBrowse link
G Ifi35 interferon induced protein 35 involved_in ISO (PMID:29038465)
(MGI:6099204|PMID:29038465)		 UniProt PMID:29038465 MGI:6099204 NCBI chrNW_004624795:1,260,476...1,268,015
Ensembl chrNW_004624795:1,260,476...1,262,080 		JBrowse link
G Kat5 lysine acetyltransferase 5 involved_in ISO (PMID:32817552) UniProt PMID:32817552 NCBI chrNW_004624767:20,668,759...20,675,367
Ensembl chrNW_004624767:20,666,763...20,675,164 		JBrowse link
G Lgals9 galectin 9 involved_in ISO (MGI:4839671|PMID:20937702) UniProt PMID:20937702 MGI:4839671 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G Nmi N-myc and STAT interactor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624866:4,230,258...4,263,156
Ensembl chrNW_004624866:4,229,535...4,263,688 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in
acts_upstream_of_or_within		 ISO (MGI:4946442|PMID:21156799)
(PMID:15692051)		 BHF-UCL
MGI		 PMID:15692051 PMID:21156799 MGI:4946442 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Polr3b RNA polymerase III subunit B involved_in ISO (PMID:19609254) UniProt PMID:19609254 NCBI chrNW_004624750:2,906,041...3,004,241
Ensembl chrNW_004624750:2,905,747...3,004,237 		JBrowse link
G Polr3c RNA polymerase III subunit C involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:17,196,418...17,212,265
Ensembl chrNW_004624772:17,196,388...17,212,727 		JBrowse link
G Polr3d RNA polymerase III subunit D involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624758:17,817,716...17,823,442
Ensembl chrNW_004624758:17,817,690...17,824,427 		JBrowse link
G Polr3f RNA polymerase III subunit F involved_in ISO (PMID:19631370) UniProt PMID:19631370 NCBI chrNW_004624741:19,196,639...19,213,252
Ensembl chrNW_004624741:19,196,605...19,210,403 		JBrowse link
G Polr3g RNA polymerase III subunit G involved_in ISO (PMID:19609254), (PMID:19631370) UniProt PMID:19609254 PMID:19631370 NCBI chrNW_004624743:9,733,372...9,765,967 JBrowse link
G Riok3 RIO kinase 3 involved_in ISO (PMID:24807708) UniProt PMID:24807708 NCBI chrNW_004624770:8,675,501...8,696,999
Ensembl chrNW_004624770:8,675,294...8,697,620 		JBrowse link
G Rnf185 ring finger protein 185 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:7,642,198...7,693,944
Ensembl chrNW_004624747:7,641,916...7,694,033 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (PMID:32433612) UniProt PMID:32433612 NCBI chrNW_004624747:26,252,788...26,275,273
Ensembl chrNW_004624747:26,252,492...26,275,173 		JBrowse link
G Srebf1 sterol regulatory element binding transcription factor 1 involved_in ISO (MGI:5287349|PMID:21531336) UniProt PMID:21531336 MGI:5287349 NCBI chrNW_004624849:3,602,103...3,623,922
Ensembl chrNW_004624849:3,602,261...3,623,465 		JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:25,427,519...25,448,180
Ensembl chrNW_004624762:25,430,926...25,448,114 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (MGI:3713420|PMID:16301656) BHF-UCL PMID:16301656 MGI:3713420 NCBI chrNW_004624812:433,540...445,517
Ensembl chrNW_004624812:439,319...446,646 		JBrowse link
G Tlr8 toll like receptor 8 involved_in ISO (PMID:16123302) UniProt PMID:16123302 NCBI chrNW_004624882:1,240,519...1,247,311
Ensembl chrNW_004624882:1,240,626...1,312,468 		JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (PMID:29426904) UniProt PMID:29426904 NCBI chrNW_004624740:16,154,441...16,163,057
Ensembl chrNW_004624740:16,159,874...16,162,090 		JBrowse link
G Zdhhc4 zinc finger DHHC-type palmitoyltransferase 4 involved_in ISO (PMID:35606353) UniProt PMID:35606353 NCBI chrNW_004624740:30,759,134...30,768,802
Ensembl chrNW_004624740:30,759,182...30,769,331 		JBrowse link
positive regulation of MDA-5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd17 ankyrin repeat domain 17 involved_in ISO (PMID:22328336) UniProt PMID:22328336 NCBI chrNW_004624735:34,337,722...34,516,891
Ensembl chrNW_004624735:34,337,835...34,519,559 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in ISO (MGI:4421606|PMID:20080593) UniProt PMID:20080593 MGI:4421606 NCBI chrNW_004624795:1,787,958...1,793,475
Ensembl chrNW_004624795:1,787,958...1,794,692 		JBrowse link
positive regulation of natural killer cell cytokine production term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd226 CD226 molecule acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:24658051) MGI
InterPro
Ensembl
TreeGrafter		 PMID:24658051 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624806:11,324,239...11,390,487
Ensembl chrNW_004624806:11,324,344...11,388,206 		JBrowse link
G Clnk cytokine dependent hematopoietic cell linker involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624755:20,667,325...20,817,497 JBrowse link
G Il21 interleukin 21 acts_upstream_of_or_within ISO (PMID:14764669) MGI PMID:14764669 NCBI chrNW_004624777:3,054,368...3,061,304
Ensembl chrNW_004624777:3,054,368...3,061,304 		JBrowse link
positive regulation of natural killer cell degranulation term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:13,997,903...14,081,140
Ensembl chrNW_004624746:13,997,681...14,081,197 		JBrowse link
G Lamp1 lysosomal associated membrane protein 1 involved_in ISO (PMID:23632890) UniProt PMID:23632890 NCBI chrNW_004624793:661,322...675,603
Ensembl chrNW_004624793:661,342...675,675 		JBrowse link
positive regulation of natural killer cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap1g1 adaptor related protein complex 1 subunit gamma 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624746:13,997,903...14,081,140
Ensembl chrNW_004624746:13,997,681...14,081,197 		JBrowse link
G Cadm1 cell adhesion molecule 1 involved_in ISO (PMID:15811952)
(MGI:3689781|PMID:15811952)		 UniProt PMID:15811952 MGI:3689781 NCBI chrNW_004624784:10,595,876...10,933,024
Ensembl chrNW_004624784:10,591,824...10,932,981 		JBrowse link
G Cd226 CD226 molecule involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624806:11,324,239...11,390,487
Ensembl chrNW_004624806:11,324,344...11,388,206 		JBrowse link
G Crtam cytotoxic and regulatory T cell molecule involved_in ISO (MGI:3689781|PMID:15811952)
(PMID:15811952)		 UniProt
HGNC-UCL		 PMID:15811952 MGI:3689781 NCBI chrNW_004624880:2,229,201...2,240,068 JBrowse link
G Il12a interleukin 12A involved_in ISO (PMID:2204066) UniProt PMID:2204066 NCBI chrNW_004624730:37,787,772...37,794,871
Ensembl chrNW_004624730:37,787,909...37,794,940 		JBrowse link
G Il18rap interleukin 18 receptor accessory protein acts_upstream_of_or_within ISO (PMID:15843532) MGI PMID:15843532 NCBI chrNW_004624749:6,930,025...6,957,241 JBrowse link
G Il21 interleukin 21 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:14764669) TreeGrafter
MGI		 PMID:14764669 GO_REF:0000118 NCBI chrNW_004624777:3,054,368...3,061,304
Ensembl chrNW_004624777:3,054,368...3,061,304 		JBrowse link
G Lag3 lymphocyte activating 3 acts_upstream_of_or_within ISO (PMID:8602528) MGI PMID:8602528 NCBI chrNW_004624860:3,454,587...3,461,649
Ensembl chrNW_004624860:3,456,347...3,461,592 		JBrowse link
G Lamp1 lysosomal associated membrane protein 1 involved_in ISO (PMID:23632890) UniProt PMID:23632890 NCBI chrNW_004624793:661,322...675,603
Ensembl chrNW_004624793:661,342...675,675 		JBrowse link
G Ncr3 natural cytotoxicity triggering receptor 3 involved_in ISO (PMID:16304049) BHF-UCL PMID:16304049 NCBI chrNW_004624754:24,607,623...24,612,716 JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in ISO (PMID:16304049) BHF-UCL PMID:16304049 NCBI chrNW_004624907:1,713,786...1,739,158
Ensembl chrNW_004624907:1,713,443...1,740,627 		JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 involved_in ISO (PMID:19933860) UniProt PMID:19933860 NCBI chrNW_004624804:5,691,011...5,763,314
Ensembl chrNW_004624804:5,690,400...5,763,288 		JBrowse link
G Sh2d1a SH2 domain containing 1A acts_upstream_of_or_within ISO (PMID:19648922)
(PMID:16127454)		 MGI PMID:16127454 PMID:19648922 NCBI chrNW_004624797:3,120,123...3,142,564
Ensembl chrNW_004624797:3,120,123...3,142,564 		JBrowse link
G Sh2d1b SH2 domain containing 1B acts_upstream_of_or_within ISO (PMID:19648922)
(PMID:20962259)		 MGI PMID:19648922 PMID:20962259 NCBI chrNW_004624787:9,077,658...9,078,053 JBrowse link
G Slamf6 SLAM family member 6 involved_in ISO (PMID:16920955) UniProt PMID:16920955 NCBI chrNW_004624794:754,530...796,732 JBrowse link
G Vav1 vav guanine nucleotide exchange factor 1 acts_upstream_of_or_within ISO (PMID:20962259) MGI PMID:20962259 NCBI chrNW_004624828:3,838,464...3,896,698
Ensembl chrNW_004624828:3,838,706...3,897,080 		JBrowse link
positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd226 CD226 molecule involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624806:11,324,239...11,390,487
Ensembl chrNW_004624806:11,324,344...11,388,206 		JBrowse link
G Crtam cytotoxic and regulatory T cell molecule involved_in ISO (PMID:15811952)
(MGI:3689781|PMID:15811952)		 HGNC-UCL
UniProt		 PMID:15811952 MGI:3689781 NCBI chrNW_004624880:2,229,201...2,240,068 JBrowse link
G Il12a interleukin 12A involved_in ISO (PMID:7903063) UniProt PMID:7903063 NCBI chrNW_004624730:37,787,772...37,794,871
Ensembl chrNW_004624730:37,787,909...37,794,940 		JBrowse link
G Il12b interleukin 12B involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:30,146,050...30,156,144
Ensembl chrNW_004624733:30,146,050...30,154,589 		JBrowse link
G LOC101712173 poliovirus receptor homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624907:1,582,636...1,596,528 JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624907:1,713,786...1,739,158
Ensembl chrNW_004624907:1,713,443...1,740,627 		JBrowse link
positive regulation of natural killer cell mediated immunity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dpp4 dipeptidyl peptidase 4 ISO RGD PMID:19327106 RGD:41408336 NCBI chrNW_004624732:3,460,529...3,535,252
Ensembl chrNW_004624732:3,460,118...3,535,249 		JBrowse link
positive regulation of NLRP3 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atat1 alpha tubulin acetyltransferase 1 acts_upstream_of_or_within ISO (PMID:23502856) MGI PMID:23502856 NCBI chrNW_004624754:25,058,312...25,069,052
Ensembl chrNW_004624754:25,058,204...25,069,561 		JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 involved_in ISO (MGI:7387171|PMID:23246432)
(PMID:28943315)		 UniProt PMID:23246432 PMID:28943315 MGI:7387171 NCBI chrNW_004624963:142,987...212,190
Ensembl chrNW_004624963:145,580...212,064 		JBrowse link
G Btk Bruton tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624902:1,173,101...1,216,662
Ensembl chrNW_004624902:1,182,682...1,216,171 		JBrowse link
G Casp4 caspase 4 involved_in ISO (MGI:5780643|PMID:26173909) UniProt PMID:26173909 MGI:5780643 NCBI chrNW_004624918:145,661...187,006 JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624739:29,341,620...29,441,232
Ensembl chrNW_004624739:29,407,568...29,441,333 		JBrowse link
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (MGI:6368386|PMID:31511697) UniProt PMID:31511697 MGI:6368386 NCBI chrNW_004624762:14,290,267...14,305,437
Ensembl chrNW_004624762:14,290,267...14,305,633 		JBrowse link
G Dhx33 DEAH-box helicase 33 involved_in ISO (PMID:23871209) UniProt PMID:23871209 NCBI chrNW_004624786:9,247,294...9,266,645
Ensembl chrNW_004624786:9,248,382...9,266,519 		JBrowse link
G Gbp5 guanylate binding protein 5 involved_in ISO (PMID:22461501) UniProt PMID:22461501 NCBI chrNW_004624742:8,324,902...8,335,965 JBrowse link
G Mapk8 mitogen-activated protein kinase 8 involved_in ISO (MGI:6106673|PMID:28943315)
(PMID:28943315)		 UniProt PMID:28943315 MGI:6106673 NCBI chrNW_004624928:1,442,216...1,494,275
Ensembl chrNW_004624928:1,439,146...1,494,266 		JBrowse link
G Mark4 microtubule affinity regulating kinase 4 involved_in ISO (PMID:28656979)
(MGI:5921465|PMID:28656979)		 UniProt PMID:28656979 MGI:5921465 NCBI chrNW_004624907:2,184,702...2,212,673
Ensembl chrNW_004624907:2,184,729...2,212,666 		JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:23582325)
(MGI:5492224|PMID:23582325)		 UniProt PMID:23582325 MGI:5492224 NCBI chrNW_004624741:4,936,556...4,951,081
Ensembl chrNW_004624741:4,939,040...4,954,058 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in ISO (PMID:33718825) UniProt PMID:33718825 NCBI chrNW_004624731:2,677,259...2,681,408
Ensembl chrNW_004624731:2,677,290...2,681,489 		JBrowse link
G Nek7 NIMA related kinase 7 involved_in ISO (MGI:5751332|PMID:26814970)
(PMID:31189953), (PMID:36442502)
(MGI:5698271|PMID:26642356)		 UniProt PMID:26642356 PMID:26814970 PMID:31189953 PMID:36442502 MGI:5698271 MGI:5751332 NCBI chrNW_004624798:2,116,888...2,283,061
Ensembl chrNW_004624798:2,116,900...2,198,999 		JBrowse link
G Plcg2 phospholipase C gamma 2 acts_upstream_of_or_within ISO (PMID:32514138) ARUK-UCL PMID:32514138 NCBI chrNW_004624746:5,678,057...5,824,663
Ensembl chrNW_004624746:5,682,666...5,821,855 		JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624733:38,012,694...38,033,745
Ensembl chrNW_004624733:38,012,392...38,036,914 		JBrowse link
G Prkd1 protein kinase D1 involved_in ISO (MGI:5913002|PMID:28716882) UniProt PMID:28716882 MGI:5913002 NCBI chrNW_004624820:2,408,562...2,726,199
Ensembl chrNW_004624820:2,408,360...2,726,606 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624772:9,472,869...9,552,751
Ensembl chrNW_004624772:9,472,913...9,550,990 		JBrowse link
G Stmp1 short transmembrane mitochondrial protein 1 involved_in ISO (MGI:6384515|PMID:31836654) UniProt PMID:31836654 MGI:6384515 NCBI chrNW_004624765:15,941,281...15,969,027 JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO (MGI:5546292|PMID:23812099) UniProt PMID:23812099 MGI:5546292 NCBI chrNW_004624840:7,323,022...7,349,334 JBrowse link
G Zdhhc5 zinc finger DHHC-type palmitoyltransferase 5 involved_in ISO (PMID:38092000) UniProt PMID:38092000 NCBI chrNW_004624864:3,027,537...3,049,567
Ensembl chrNW_004624864:3,028,170...3,048,945 		JBrowse link
positive regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (MGI:6278628|PMID:21277849), (MGI:6450424|PMID:19570976) UniProt PMID:19570976 PMID:21277849 MGI:6278628 MGI:6450424 NCBI chrNW_004624747:26,252,788...26,275,273
Ensembl chrNW_004624747:26,252,492...26,275,173 		JBrowse link
G Slc46a2 solute carrier family 46 member 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:22,124,321...22,134,601
Ensembl chrNW_004624760:22,124,321...22,134,906 		JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18261938) Ensembl
MGI		 PMID:18261938 GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nagk N-acetylglucosamine kinase involved_in ISO (MGI:7484284|PMID:36002575)
(PMID:36002575)		 UniProt PMID:36002575 MGI:7484284 NCBI chrNW_004624762:2,382,708...2,391,896
Ensembl chrNW_004624762:2,382,709...2,391,656 		JBrowse link
G Peli3 pellino E3 ubiquitin protein ligase family member 3 acts_upstream_of_or_within ISO (PMID:23892723) MGI PMID:23892723 NCBI chrNW_004624767:19,920,149...19,938,892
Ensembl chrNW_004624767:19,920,687...19,929,638 		JBrowse link
G Slc15a3 solute carrier family 15 member 3 involved_in ISO (MGI:5571205|PMID:24695226) UniProt PMID:24695226 MGI:5571205 NCBI chrNW_004624926:294,263...303,326
Ensembl chrNW_004624926:294,376...303,248 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (MGI:5571205|PMID:24695226) UniProt PMID:24695226 MGI:5571205 NCBI chrNW_004624747:26,252,788...26,275,273
Ensembl chrNW_004624747:26,252,492...26,275,173 		JBrowse link
G Tlr4 toll like receptor 4 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18261938) Ensembl
MGI		 PMID:18261938 GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
positive regulation of pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Zdhhc5 zinc finger DHHC-type palmitoyltransferase 5 involved_in ISO (MGI:6414746|PMID:31649195)
(PMID:31649195)		 UniProt PMID:31649195 MGI:6414746 NCBI chrNW_004624864:3,027,537...3,049,567
Ensembl chrNW_004624864:3,028,170...3,048,945 		JBrowse link
positive regulation of respiratory burst involved in inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lbp lipopolysaccharide binding protein involved_in ISO (MGI:1097829|PMID:9338787) BHF-UCL PMID:9338787 MGI:1097829 NCBI chrNW_004624842:1,306,299...1,332,269
Ensembl chrNW_004624842:1,301,831...1,332,346 		JBrowse link
G Rps19 ribosomal protein S19 involved_in ISO (PMID:15750715) UniProt PMID:15750715 NCBI chrNW_004624907:811,069...818,218
Ensembl chrNW_004624907:810,984...818,614 		JBrowse link
positive regulation of response to type II interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpx hemopexin acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:18641331) MGI
Ensembl		 PMID:18641331 GO_REF:0000107 NCBI chrNW_004624817:7,947,554...7,957,553
Ensembl chrNW_004624817:7,947,639...7,957,462 		JBrowse link
positive regulation of RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ankrd17 ankyrin repeat domain 17 involved_in ISO (PMID:22328336) UniProt PMID:22328336 NCBI chrNW_004624735:34,337,722...34,516,891
Ensembl chrNW_004624735:34,337,835...34,519,559 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in ISO (MGI:4421606|PMID:20080593) UniProt PMID:20080593 MGI:4421606 NCBI chrNW_004624795:1,787,958...1,793,475
Ensembl chrNW_004624795:1,787,958...1,794,692 		JBrowse link
G Pum1 pumilio RNA binding family member 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624764:14,361,376...14,486,460
Ensembl chrNW_004624764:14,361,012...14,486,542 		JBrowse link
G Pum2 pumilio RNA binding family member 2 involved_in ISO (PMID:25340845) UniProt PMID:25340845 NCBI chrNW_004624738:2,951,253...3,042,905
Ensembl chrNW_004624738:2,950,415...3,043,011 		JBrowse link
G Usp15 ubiquitin specific peptidase 15 involved_in ISO (PMID:24399297) CACAO PMID:24399297 NCBI chrNW_004624802:5,559,107...5,682,338
Ensembl chrNW_004624802:5,560,574...5,682,300 		JBrowse link
G Zc3hav1 zinc finger CCCH-type containing, antiviral 1 involved_in ISO (PMID:21102435) UniProt PMID:21102435 NCBI chrNW_004624765:19,441,299...19,509,468
Ensembl chrNW_004624765:19,439,923...19,509,186 		JBrowse link
G Zcchc3 zinc finger CCHC-type containing 3 involved_in ISO (PMID:30193849) UniProt PMID:30193849 NCBI chrNW_004624741:1,399,405...1,400,980
Ensembl chrNW_004624741:1,399,481...1,400,701 		JBrowse link
positive regulation of toll-like receptor 13 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Treml4 triggering receptor expressed on myeloid cells like 4 involved_in ISO (MGI:5775261|PMID:25848864) UniProt PMID:25848864 MGI:5775261 NCBI chrNW_004624754:17,600,341...17,608,766 JBrowse link
positive regulation of toll-like receptor 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:19865078) UniProt PMID:19865078 NCBI chrNW_004624869:1,326,605...1,337,195 JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:5788395|PMID:16267105) UniProt PMID:16267105 MGI:5788395 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G LOC101717043 cytochrome b-245 light chain involved_in ISO (PMID:22423966) UniProt PMID:22423966 NCBI chrNW_004624746:911,852...919,361
Ensembl chrNW_004624746:911,842...919,362 		JBrowse link
G Mfhas1 multifunctional ROCO family signaling regulator 1 involved_in ISO (MGI:6162316|PMID:26599367)
(PMID:26599367), (PMID:28471450)		 UniProt PMID:26599367 PMID:28471450 MGI:6162316 NCBI chrNW_004624839:4,908,861...5,000,218
Ensembl chrNW_004624839:4,908,639...5,000,677 		JBrowse link
G Pja2 praja ring finger ubiquitin ligase 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624743:27,251,937...27,331,213
Ensembl chrNW_004624743:27,254,436...27,301,934 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:19509286) BHF-UCL PMID:19509286 NCBI chrNW_004624812:433,540...445,517
Ensembl chrNW_004624812:439,319...446,646 		JBrowse link
G Tlr1 toll like receptor 1 involved_in ISO (PMID:22198949) ARUK-UCL PMID:22198949 NCBI chrNW_004624840:7,287,772...7,349,282
Ensembl chrNW_004624840:7,287,781...7,290,162 		JBrowse link
positive regulation of toll-like receptor 3 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav1 caveolin 1 involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chrNW_004624827:2,844,855...2,878,367
Ensembl chrNW_004624827:2,844,115...2,879,179 		JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:19865078) UniProt PMID:19865078 NCBI chrNW_004624869:1,326,605...1,337,195 JBrowse link
G Flot1 flotillin 1 involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chrNW_004624754:24,992,961...25,000,463
Ensembl chrNW_004624754:24,992,929...25,003,759 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:19734906) MGI PMID:19734906 NCBI chrNW_004624762:9,328,275...9,382,996
Ensembl chrNW_004624762:9,328,109...9,386,067 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624772:9,472,869...9,552,751
Ensembl chrNW_004624772:9,472,913...9,550,990 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (MGI:4943396|PMID:17322885) BHF-UCL PMID:17322885 MGI:4943396 NCBI chrNW_004624812:433,540...445,517
Ensembl chrNW_004624812:439,319...446,646 		JBrowse link
G Trim3 tripartite motif containing 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624817:7,965,976...7,991,426
Ensembl chrNW_004624817:7,965,976...7,991,411 		JBrowse link
G Wdfy1 WD repeat and FYVE domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624823:1,353,601...1,405,762
Ensembl chrNW_004624823:1,353,621...1,401,160 		JBrowse link
positive regulation of toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in ISO (MGI:5645195|PMID:24380872) UniProt PMID:24380872 MGI:5645195 NCBI chrNW_004624743:33,372,023...33,374,438
Ensembl chrNW_004624743:33,367,898...33,373,922 		JBrowse link
G F2rl1 F2R like trypsin receptor 1 involved_in ISO (PMID:18622013) UniProt PMID:18622013 NCBI chrNW_004624869:1,326,605...1,337,195 JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:5788395|PMID:16267105) UniProt PMID:16267105 MGI:5788395 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Ifi35 interferon induced protein 35 involved_in ISO (PMID:29038465) UniProt PMID:29038465 NCBI chrNW_004624795:1,260,476...1,268,015
Ensembl chrNW_004624795:1,260,476...1,262,080 		JBrowse link
G Lbp lipopolysaccharide binding protein involved_in ISO (PMID:11528597) BHF-UCL PMID:11528597 NCBI chrNW_004624842:1,306,299...1,332,269
Ensembl chrNW_004624842:1,301,831...1,332,346 		JBrowse link
G LOC101722352 TIR domain-containing adapter molecule 2 involved_in ISO (PMID:22685567)
(PMID:19412184)		 UniProt PMID:19412184 PMID:22685567 NCBI chrNW_004624733:6,304,454...6,341,827 JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:20345905) UniProt PMID:20345905 NCBI chrNW_004624730:74,636,554...74,656,817
Ensembl chrNW_004624730:74,636,522...74,656,886 		JBrowse link
G Ninj1 ninjurin 1 involved_in ISO (MGI:6694429|PMID:25860173) UniProt PMID:25860173 MGI:6694429 NCBI chrNW_004624868:3,430,539...3,442,205
Ensembl chrNW_004624868:3,430,209...3,445,542 		JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 involved_in ISO (PMID:18511497) BHF-UCL PMID:18511497 NCBI chrNW_004624767:1,459,601...1,473,224
Ensembl chrNW_004624767:1,459,601...1,467,795 		JBrowse link
G Peli1 pellino E3 ubiquitin protein ligase 1 acts_upstream_of_or_within ISO (PMID:19734906) MGI PMID:19734906 NCBI chrNW_004624762:9,328,275...9,382,996
Ensembl chrNW_004624762:9,328,109...9,386,067 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624772:9,472,869...9,552,751
Ensembl chrNW_004624772:9,472,913...9,550,990 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:19509286) BHF-UCL PMID:19509286 NCBI chrNW_004624812:433,540...445,517
Ensembl chrNW_004624812:439,319...446,646 		JBrowse link
G Wdfy1 WD repeat and FYVE domain containing 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624823:1,353,601...1,405,762
Ensembl chrNW_004624823:1,353,621...1,401,160 		JBrowse link
G Znrf1 zinc and ring finger 1 involved_in ISO (PMID:28593998) UniProt PMID:28593998 NCBI chrNW_004624746:11,847,627...11,954,637
Ensembl chrNW_004624746:11,848,425...11,954,784 		JBrowse link
positive regulation of toll-like receptor 7 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:30341167) UniProt PMID:30341167 NCBI chrNW_004624762:14,290,267...14,305,437
Ensembl chrNW_004624762:14,290,267...14,305,633 		JBrowse link
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624772:9,472,869...9,552,751
Ensembl chrNW_004624772:9,472,913...9,550,990 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624846:3,395,536...3,408,616
Ensembl chrNW_004624846:3,395,406...3,408,626 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (PMID:25238095), (PMID:32433612)
(MGI:4848237|PMID:21045126), (MGI:6357091|PMID:25238095)		 UniProt PMID:21045126 PMID:25238095 PMID:32433612 MGI:4848237 MGI:6357091 NCBI chrNW_004624747:26,252,788...26,275,273
Ensembl chrNW_004624747:26,252,492...26,275,173 		JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:25,427,519...25,448,180
Ensembl chrNW_004624762:25,430,926...25,448,114 		JBrowse link
G Treml4 triggering receptor expressed on myeloid cells like 4 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624754:17,600,341...17,608,766 JBrowse link
positive regulation of toll-like receptor 8 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ddx3x DEAD-box helicase 3 X-linked involved_in ISO (PMID:30341167) UniProt PMID:30341167 NCBI chrNW_004624762:14,290,267...14,305,437
Ensembl chrNW_004624762:14,290,267...14,305,633 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (PMID:32433612) UniProt PMID:32433612 NCBI chrNW_004624747:26,252,788...26,275,273
Ensembl chrNW_004624747:26,252,492...26,275,173 		JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624762:25,427,519...25,448,180
Ensembl chrNW_004624762:25,430,926...25,448,114 		JBrowse link
positive regulation of toll-like receptor 9 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptpn22 protein tyrosine phosphatase non-receptor type 22 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624772:9,472,869...9,552,751
Ensembl chrNW_004624772:9,472,913...9,550,990 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624846:3,395,536...3,408,616
Ensembl chrNW_004624846:3,395,406...3,408,626 		JBrowse link
G Rtn4 reticulon 4 involved_in ISO (MGI:6274965|PMID:25917084) UniProt PMID:25917084 MGI:6274965 NCBI chrNW_004624833:6,514,409...6,584,061 JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (MGI:4848237|PMID:21045126), (MGI:6278628|PMID:21277849), (MGI:6357091|PMID:25238095)
(PMID:25238095)		 UniProt PMID:21045126 PMID:21277849 PMID:25238095 MGI:4848237 MGI:6278628 MGI:6357091 NCBI chrNW_004624747:26,252,788...26,275,273
Ensembl chrNW_004624747:26,252,492...26,275,173 		JBrowse link
G Treml4 triggering receptor expressed on myeloid cells like 4 involved_in ISO (MGI:5775261|PMID:25848864) UniProt PMID:25848864 MGI:5775261 NCBI chrNW_004624754:17,600,341...17,608,766 JBrowse link
G Zdhhc3 zinc finger DHHC-type palmitoyltransferase 3 involved_in ISO (PMID:38169466) UniProt PMID:38169466 NCBI chrNW_004624730:75,561,842...75,597,867
Ensembl chrNW_004624730:75,561,812...75,599,152 		JBrowse link
positive regulation of toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdi1 GDP dissociation inhibitor 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624946:902,831...908,815
Ensembl chrNW_004624946:902,461...909,613 		JBrowse link
G Lrch4 leucine rich repeats and calponin homology domain containing 4 involved_in ISO (MGI:3615854|PMID:16449650) UniProt PMID:16449650 MGI:3615854 NCBI chrNW_004624740:16,491,804...16,503,682
Ensembl chrNW_004624740:16,491,837...16,503,491 		JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in ISO (MGI:5487531|PMID:20728433) UniProt PMID:20728433 MGI:5487531 NCBI chrNW_004624737:8,021,478...8,154,543
Ensembl chrNW_004624737:8,022,836...8,154,422 		JBrowse link
positive regulation of type I interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fadd Fas associated via death domain involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:17,050,929...17,059,648
Ensembl chrNW_004624767:17,055,509...17,059,705 		JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in ISO (MGI:5792628|PMID:27129230)
(PMID:24882218)		 UniProt PMID:24882218 PMID:27129230 MGI:5792628 NCBI chrNW_004624807:4,913,734...4,934,096
Ensembl chrNW_004624807:4,913,742...4,933,267 		JBrowse link
G Irf3 interferon regulatory factor 3 acts_upstream_of_or_within ISO (PMID:17618271) MGI PMID:17618271 NCBI chrNW_004624832:4,611,445...4,616,319
Ensembl chrNW_004624832:4,612,374...4,616,276 		JBrowse link
G Irf7 interferon regulatory factor 7 acts_upstream_of_or_within ISO (PMID:17618271) MGI PMID:17618271 NCBI chrNW_004624766:21,850,211...21,853,189 JBrowse link
G Lsm14a LSM14A mRNA processing body assembly factor acts_upstream_of_or_within ISO (PMID:22745163) MGI PMID:22745163 NCBI chrNW_004624794:8,913,278...9,035,652 JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO (PMID:16127453), (PMID:20451243) BHF-UCL PMID:16127453 PMID:20451243 NCBI chrNW_004624741:4,936,556...4,951,081
Ensembl chrNW_004624741:4,939,040...4,954,058 		JBrowse link
G Mmp12 matrix metallopeptidase 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624878:6,017...17,368
Ensembl chrNW_004624878:6,035...17,445 		JBrowse link
G Nlrc5 NLR family CARD domain containing 5 involved_in ISO (PMID:20061403) UniProt PMID:20061403 NCBI chrNW_004624746:28,954,009...29,030,337
Ensembl chrNW_004624746:28,954,016...29,030,322 		JBrowse link
G Rbm47 RNA binding motif protein 47 involved_in ISO (PMID:34160127) UniProt PMID:34160127 NCBI chrNW_004624761:26,429,130...26,588,563
Ensembl chrNW_004624761:26,513,759...26,588,950 		JBrowse link
G Rnf185 ring finger protein 185 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624747:7,642,198...7,693,944
Ensembl chrNW_004624747:7,641,916...7,694,033 		JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO (MGI:6827194|PMID:23910378)
(PMID:23910378)		 ComplexPortal PMID:23910378 MGI:6827194 NCBI chrNW_004624743:32,277,197...32,283,346
Ensembl chrNW_004624743:32,273,385...32,283,235 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:3,861,821...3,914,061
Ensembl chrNW_004624802:3,862,709...3,914,028 		JBrowse link
G Trim41 tripartite motif containing 41 involved_in ISO (PMID:29760876) UniProt PMID:29760876 NCBI chrNW_004624958:187,174...198,971
Ensembl chrNW_004624958:188,133...198,242 		JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (PMID:29426904)
(MGI:6119245|PMID:29426904)		 UniProt PMID:29426904 MGI:6119245 NCBI chrNW_004624740:16,154,441...16,163,057
Ensembl chrNW_004624740:16,159,874...16,162,090 		JBrowse link
G Trim6 tripartite motif containing 6 involved_in ISO (MGI:5645191|PMID:24882218)
(PMID:24882218)		 UniProt PMID:24882218 MGI:5645191 NCBI chrNW_004624817:7,029,104...7,053,447
Ensembl chrNW_004624817:7,045,228...7,053,525 		JBrowse link
G Ube2k ubiquitin conjugating enzyme E2 K involved_in ISO (PMID:24882218) UniProt PMID:24882218 NCBI chrNW_004624761:27,205,034...27,277,016
Ensembl chrNW_004624761:27,205,034...27,276,884 		JBrowse link
G Usp27x ubiquitin specific peptidase 27 X-linked involved_in ISO (PMID:31534008) UniProt PMID:31534008 NCBI chrNW_004624893:1,314,670...1,329,823
Ensembl chrNW_004624893:1,314,670...1,329,853 		JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO (PMID:19399181) BHF-UCL PMID:19399181 NCBI chrNW_004624822:1,824,378...1,843,599
Ensembl chrNW_004624822:1,825,238...1,841,288 		JBrowse link
G Zbp1 Z-DNA binding protein 1 acts_upstream_of_or_within ISO (PMID:17618271) MGI PMID:17618271 NCBI chrNW_004624741:24,022,433...24,033,090 JBrowse link
positive regulation of type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpx hemopexin involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18641331) Ensembl
MGI		 PMID:18641331 GO_REF:0000107 NCBI chrNW_004624817:7,947,554...7,957,553
Ensembl chrNW_004624817:7,947,639...7,957,462 		JBrowse link
G Irgm immunity related GTPase M involved_in ISO (MGI:3656111|PMID:16888103)
(PMID:16888103)		 UniProt PMID:16888103 MGI:3656111 NCBI chrNW_004624733:41,241,488...41,248,162 JBrowse link
G Med1 mediator complex subunit 1 acts_upstream_of_or_within ISO (PMID:18339625) MGI PMID:18339625 NCBI chrNW_004624795:3,572,025...3,605,675
Ensembl chrNW_004624795:3,572,266...3,607,126 		JBrowse link
G Nlrc5 NLR family CARD domain containing 5 involved_in ISO (PMID:20061403)
(PMID:20639463)		 UniProt
BHF-UCL		 PMID:20061403 PMID:20639463 NCBI chrNW_004624746:28,954,009...29,030,337
Ensembl chrNW_004624746:28,954,016...29,030,322 		JBrowse link
G Parp9 poly(ADP-ribose) polymerase family member 9 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624912:827,112...968,501
Ensembl chrNW_004624912:827,547...859,199 		JBrowse link
G Txk TXK tyrosine kinase involved_in ISO (PMID:11859127) UniProt PMID:11859127 NCBI chrNW_004624761:18,841,795...18,897,564
Ensembl chrNW_004624761:18,841,795...18,897,458 		JBrowse link
protection from natural killer cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tap1 transporter 1, ATP binding cassette subfamily B member ISO RGD PMID:8120379 RGD:2312378 NCBI chrNW_004624754:23,815,464...23,822,480
Ensembl chrNW_004624754:23,815,915...23,822,827 		JBrowse link
G Tap2 transporter 2, ATP binding cassette subfamily B member ISO RGD PMID:8120379 RGD:2312378 NCBI chrNW_004624754:23,827,782...23,845,690
Ensembl chrNW_004624754:23,827,706...23,837,356 		JBrowse link
regulation of complement activation, alternative pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cfh complement factor H involved_in ISO (PMID:20378178), (PMID:28671664) ComplexPortal PMID:20378178 PMID:28671664 NCBI chrNW_004624798:3,332,549...3,414,435 JBrowse link
regulation of innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E involved_in ISO (MGI:6212700|PMID:29336888) UniProt PMID:29336888 MGI:6212700 NCBI chrNW_004624907:1,752,322...1,755,308 JBrowse link
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in ISO (MGI:6270783|PMID:27219021) UniProt PMID:27219021 MGI:6270783 NCBI chrNW_004624822:31,175...74,252
Ensembl chrNW_004624822:33,880...74,308 		JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 involved_in ISO (MGI:6270783|PMID:27219021) UniProt PMID:27219021 MGI:6270783 NCBI chrNW_004624750:3,789,015...3,827,079
Ensembl chrNW_004624750:3,789,022...3,827,079 		JBrowse link
G Casp8 caspase 8 involved_in ISO (MGI:6472603|PMID:32971525) UniProt PMID:32971525 MGI:6472603 NCBI chrNW_004624899:427,064...450,931
Ensembl chrNW_004624899:424,363...451,087 		JBrowse link
G Dhx58 DExH-box helicase 58 involved_in ISO (PMID:18411269) UniProt PMID:18411269 NCBI chrNW_004624795:1,787,958...1,793,475
Ensembl chrNW_004624795:1,787,958...1,794,692 		JBrowse link
G Dusp10 dual specificity phosphatase 10 acts_upstream_of_or_within ISO (PMID:15306813) MGI PMID:15306813 NCBI chrNW_004624835:4,751,651...4,783,916
Ensembl chrNW_004624835:4,750,077...4,782,249 		JBrowse link
G Fgr FGR proto-oncogene, Src family tyrosine kinase involved_in ISO (MGI:5294498|PMID:21746961) UniProt PMID:21746961 MGI:5294498 NCBI chrNW_004624764:11,482,719...11,513,215
Ensembl chrNW_004624764:11,489,685...11,513,270 		JBrowse link
G Lrp8 LDL receptor related protein 8 involved_in ISO (MGI:6212700|PMID:29336888) UniProt PMID:29336888 MGI:6212700 NCBI chrNW_004624934:1,145,982...1,220,177
Ensembl chrNW_004624934:1,146,000...1,215,922 		JBrowse link
G Myo1f myosin IF acts_upstream_of_or_within ISO (PMID:17023661) MGI PMID:17023661 NCBI chrNW_004624828:1,269,287...1,307,676
Ensembl chrNW_004624828:1,269,610...1,307,443 		JBrowse link
G N4bp1 NEDD4 binding protein 1 involved_in ISO (MGI:6472603|PMID:32971525) UniProt PMID:32971525 MGI:6472603 NCBI chrNW_004624914:2,319,809...2,369,128
Ensembl chrNW_004624914:2,319,474...2,369,078 		JBrowse link
G Nfe2l2 NFE2 like bZIP transcription factor 2 involved_in ISO (MGI:3622037|PMID:16585964) UniProt PMID:16585964 MGI:3622037 NCBI chrNW_004624787:14,355,330...14,381,353
Ensembl chrNW_004624787:14,355,791...14,381,251 		JBrowse link
G Nlrc5 NLR family CARD domain containing 5 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624746:28,954,009...29,030,337
Ensembl chrNW_004624746:28,954,016...29,030,322 		JBrowse link
G Nlrx1 NLR family member X1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624784:14,549,926...14,564,028
Ensembl chrNW_004624784:14,549,834...14,563,398 		JBrowse link
G Nod1 nucleotide binding oligomerization domain containing 1 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624739:285,791...339,752
Ensembl chrNW_004624739:285,689...341,956 		JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 involved_in IEA UniProt GO_REF:0000117 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Rnf135 ring finger protein 135 involved_in ISO (PMID:19017631) UniProt PMID:19017631 NCBI chrNW_004624875:221,206...231,178
Ensembl chrNW_004624875:220,771...232,394 		JBrowse link
G Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624842:2,591,016...2,649,746
Ensembl chrNW_004624842:2,591,148...2,647,742 		JBrowse link
G Serpinb1 serpin family B member 1 involved_in ISO (MGI:3760197|PMID:17664292) UniProt PMID:17664292 MGI:3760197 NCBI chrNW_004624756:21,993,777...22,003,715
Ensembl chrNW_004624756:21,994,769...22,002,065 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in IEA UniProt GO_REF:0000104 NCBI chrNW_004624812:433,540...445,517
Ensembl chrNW_004624812:439,319...446,646 		JBrowse link
G Tkfc triokinase and FMN cyclase involved_in ISO (PMID:16289032) UniProt PMID:16289032 NCBI chrNW_004624926:862,339...870,936
Ensembl chrNW_004624926:862,339...869,926 		JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:6275756|PMID:30548312) UniProt PMID:30548312 MGI:6275756 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:20871604), (PMID:26320659) MGI PMID:20871604 PMID:26320659 NCBI chrNW_004624730:2,431,270...2,433,010
Ensembl chrNW_004624730:2,431,999...2,432,959 		JBrowse link
regulation of MyD88-dependent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irf1 interferon regulatory factor 1 involved_in ISO (MGI:3691368|PMID:17018642) UniProt PMID:17018642 MGI:3691368 NCBI chrNW_004624733:39,596,565...39,603,428
Ensembl chrNW_004624733:39,596,501...39,603,526 		JBrowse link
G Irf7 interferon regulatory factor 7 involved_in ISO (MGI:3575992|PMID:15800576) UniProt PMID:15800576 MGI:3575992 NCBI chrNW_004624766:21,850,211...21,853,189 JBrowse link
regulation of MyD88-independent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Irf7 interferon regulatory factor 7 involved_in ISO (MGI:3575992|PMID:15800576) UniProt PMID:15800576 MGI:3575992 NCBI chrNW_004624766:21,850,211...21,853,189 JBrowse link
regulation of natural killer cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lep leptin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624783:7,708,820...7,721,610
Ensembl chrNW_004624783:7,708,588...7,721,727 		JBrowse link
G Pik3r6 phosphoinositide-3-kinase regulatory subunit 6 involved_in ISO (PMID:11062502) CACAO PMID:11062502 NCBI chrNW_004624786:11,324,558...11,386,202
Ensembl chrNW_004624786:11,326,364...11,371,767 		JBrowse link
regulation of NLRP3 inflammasome complex assembly term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eif2ak2 eukaryotic translation initiation factor 2 alpha kinase 2 involved_in ISO (MGI:5432942|PMID:22801494) UniProt PMID:22801494 MGI:5432942 NCBI chrNW_004624738:18,716,623...18,764,243
Ensembl chrNW_004624738:18,717,092...18,758,457 		JBrowse link
regulation of nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc15a2 solute carrier family 15 member 2 involved_in ISO (MGI:6192142|PMID:29784761) UniProt PMID:29784761 MGI:6192142 NCBI chrNW_004624912:180,048...222,909
Ensembl chrNW_004624912:179,969...222,909 		JBrowse link
G Slc15a4 solute carrier family 15 member 4 involved_in ISO (MGI:6192142|PMID:29784761) UniProt PMID:29784761 MGI:6192142 NCBI chrNW_004624747:26,252,788...26,275,273
Ensembl chrNW_004624747:26,252,492...26,275,173 		JBrowse link
regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Peli3 pellino E3 ubiquitin protein ligase family member 3 acts_upstream_of_or_within ISO (PMID:23892723) MGI PMID:23892723 NCBI chrNW_004624767:19,920,149...19,938,892
Ensembl chrNW_004624767:19,920,687...19,929,638 		JBrowse link
regulation of respiratory burst involved in inflammatory response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ncf1 neutrophil cytosolic factor 1 ISO RGD PMID:21275845 RGD:41404729 NCBI chrNW_004624740:13,428,375...13,439,915
Ensembl chrNW_004624740:13,429,476...13,439,807 		JBrowse link
regulation of response to type II interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp9 poly(ADP-ribose) polymerase family member 9 involved_in ISO (PMID:16809771) UniProt PMID:16809771 NCBI chrNW_004624912:827,112...968,501
Ensembl chrNW_004624912:827,547...859,199 		JBrowse link
regulation of RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nop53 NOP53 ribosome biogenesis factor involved_in ISO (PMID:27824081) UniProt PMID:27824081 NCBI chrNW_004624832:6,144,260...6,154,172
Ensembl chrNW_004624832:6,145,749...6,154,411 		JBrowse link
regulation of toll-like receptor 3 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flot2 flotillin 2 NOT|involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chrNW_004624786:1,449,001...1,465,208
Ensembl chrNW_004624786:1,450,234...1,465,102 		JBrowse link
G Hcfc2 host cell factor C2 acts_upstream_of_or_within ISO (PMID:28970238) MGI PMID:28970238 NCBI chrNW_004624750:4,627,848...4,660,448
Ensembl chrNW_004624750:4,629,669...4,660,413 		JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase involved_in ISO (PMID:37158982) UniProt PMID:37158982 NCBI chrNW_004624842:2,212,561...2,260,514
Ensembl chrNW_004624842:2,211,020...2,230,132 		JBrowse link
regulation of toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 involved_in ISO (MGI:6270783|PMID:27219021) UniProt PMID:27219021 MGI:6270783 NCBI chrNW_004624822:31,175...74,252
Ensembl chrNW_004624822:33,880...74,308 		JBrowse link
G Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 involved_in ISO (MGI:6270783|PMID:27219021) UniProt PMID:27219021 MGI:6270783 NCBI chrNW_004624750:3,789,015...3,827,079
Ensembl chrNW_004624750:3,789,022...3,827,079 		JBrowse link
G Flot1 flotillin 1 NOT|involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chrNW_004624754:24,992,961...25,000,463
Ensembl chrNW_004624754:24,992,929...25,003,759 		JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624815:1,290,106...1,376,961
Ensembl chrNW_004624815:1,289,997...1,369,610 		JBrowse link
regulation of toll-like receptor 6 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:6695864|PMID:31134514) ARUK-UCL PMID:31134514 MGI:6695864 NCBI chrNW_004624754:17,643,397...17,649,255
Ensembl chrNW_004624754:17,643,363...17,648,231 		JBrowse link
regulation of toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G App amyloid beta precursor protein involved_in ISO (PMID:20037584) ARUK-UCL PMID:20037584 NCBI chrNW_004624745:13,904,912...14,159,374
Ensembl chrNW_004624745:13,902,577...14,159,372 		JBrowse link
G Cd36 CD36 molecule (CD36 blood group) involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624739:29,341,620...29,441,232
Ensembl chrNW_004624739:29,407,568...29,441,333 		JBrowse link
G Esr1 estrogen receptor 1 acts_upstream_of_or_within ISO (PMID:22659029) MGI PMID:22659029 NCBI chrNW_004624785:6,164,507...6,601,302
Ensembl chrNW_004624785:6,164,379...6,601,326 		JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624742:5,260,651...5,271,908
Ensembl chrNW_004624742:5,261,537...5,270,695 		JBrowse link
G Mfhas1 multifunctional ROCO family signaling regulator 1 involved_in ISO (MGI:6158883|PMID:20616063) UniProt PMID:20616063 MGI:6158883 NCBI chrNW_004624839:4,908,861...5,000,218
Ensembl chrNW_004624839:4,908,639...5,000,677 		JBrowse link
G Tasl TLR adaptor interacting with endolysosomal SLC15A4 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624762:25,427,519...25,448,180
Ensembl chrNW_004624762:25,430,926...25,448,114 		JBrowse link
regulation of type I interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc37 cell division cycle 37, HSP90 cochaperone acts_upstream_of_or_within ISO (PMID:16280321) MGI PMID:16280321 NCBI chrNW_004624828:2,523,761...2,533,387
Ensembl chrNW_004624828:2,521,272...2,535,475 		JBrowse link
regulation of type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc37 cell division cycle 37, HSP90 cochaperone acts_upstream_of_or_within ISO (PMID:16280321) MGI PMID:16280321 NCBI chrNW_004624828:2,523,761...2,533,387
Ensembl chrNW_004624828:2,521,272...2,535,475 		JBrowse link
response to type I interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ch25h cholesterol 25-hydroxylase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:39,649...41,241 JBrowse link
G Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon involved_in ISO (MGI:5645191|PMID:24882218) UniProt PMID:24882218 MGI:5645191 NCBI chrNW_004624807:4,913,734...4,934,096
Ensembl chrNW_004624807:4,913,742...4,933,267 		JBrowse link
G Isg15 ISG15 ubiquitin like modifier involved_in ISO (PMID:22859821) UniProt PMID:22859821 NCBI chrNW_004624818:8,510,657...8,511,749 JBrowse link
G Setd2 SET domain containing 2, histone lysine methyltransferase involved_in ISO (PMID:28753426) UniProt PMID:28753426 NCBI chrNW_004624730:74,187,981...74,277,857
Ensembl chrNW_004624730:74,187,995...74,277,200 		JBrowse link
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting involved_in ISO (PMID:26735137) UniProt PMID:26735137 NCBI chrNW_004624828:2,285,577...2,293,307
Ensembl chrNW_004624828:2,287,275...2,292,199 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624802:10,713,276...10,718,391
Ensembl chrNW_004624802:10,713,276...10,719,253 		JBrowse link
G Smpd1 sphingomyelin phosphodiesterase 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624817:7,909,777...7,913,419
Ensembl chrNW_004624817:7,909,468...7,913,417 		JBrowse link
G Sp100 SP100 nuclear antigen involved_in ISO (PMID:15247905), (PMID:16873258), (PMID:9230084)
(PMID:8810287)		 BHF-UCL PMID:8810287 PMID:9230084 PMID:15247905 PMID:16873258 NCBI chrNW_004624843:3,982,920...4,058,081
Ensembl chrNW_004624843:3,983,040...4,061,930 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 involved_in ISO (MGI:5645191|PMID:24882218) UniProt PMID:24882218 MGI:5645191 NCBI chrNW_004624854:5,067,578...5,106,052
Ensembl chrNW_004624854:5,067,535...5,102,106 		JBrowse link
G Trim56 tripartite motif containing 56 involved_in ISO (MGI:4849871|PMID:21074459) UniProt PMID:21074459 MGI:4849871 NCBI chrNW_004624740:16,154,441...16,163,057
Ensembl chrNW_004624740:16,159,874...16,162,090 		JBrowse link
response to type II interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ISO RGD PMID:18433458 RGD:2315954 NCBI chrNW_004624760:1,865,474...1,889,394
Ensembl chrNW_004624760:1,865,376...1,889,203 		JBrowse link
G Bst2 bone marrow stromal cell antigen 2 involved_in ISO (MGI:5448513|PMID:21919738) UniProt PMID:21919738 MGI:5448513 NCBI chrNW_004624908:588,925...591,033 JBrowse link
G Calcoco2 calcium binding and coiled-coil domain 2 involved_in ISO (PMID:9230084) BHF-UCL PMID:9230084 NCBI chrNW_004624795:5,259,976...5,281,958
Ensembl chrNW_004624795:5,265,141...5,283,719 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO PMID:10477596 BHF-UCL PMID:10477596 RGD:8553666 NCBI chrNW_004624875:3,334,136...3,342,085
Ensembl chrNW_004624875:3,334,078...3,341,614 		JBrowse link
G Cd40 CD40 molecule involved_in ISO
IEA		 with tumor necrosis factor alpha RGD
TreeGrafter		 PMID:10403401 GO_REF:0000118 RGD:634252 NCBI chrNW_004624790:8,475,640...8,485,927
Ensembl chrNW_004624790:8,476,158...8,485,856 		JBrowse link
G Cd74 CD74 molecule involved_in ISO (PMID:32855215)
(MGI:6478071|PMID:32855215)		 UniProt PMID:32855215 MGI:6478071 NCBI chrNW_004624774:9,699,876...9,708,871
Ensembl chrNW_004624774:9,700,393...9,709,514 		JBrowse link
G Cd86 CD86 molecule ISO RGD PMID:16839612 RGD:2313438 NCBI chrNW_004624912:350,201...432,410
Ensembl chrNW_004624912:350,157...426,712 		JBrowse link
G Ciita class II major histocompatibility complex transactivator involved_in
acts_upstream_of_or_within		 ISO (PMID:19041327), (PMID:32855215)
(PMID:16280321)
(MGI:6478071|PMID:32855215)		 UniProt
MGI		 PMID:16280321 PMID:19041327 PMID:32855215 MGI:6478071 NCBI chrNW_004624824:8,099,877...8,156,661
Ensembl chrNW_004624824:8,116,537...8,153,482 		JBrowse link
G Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 involved_in ISO (MGI:1312962|PMID:9811838) UniProt PMID:9811838 MGI:1312962 NCBI chrNW_004624903:2,596,049...2,601,315 JBrowse link
G Cxcl16 C-X-C motif chemokine ligand 16 involved_in ISO (PMID:18373975) BHF-UCL PMID:18373975 NCBI chrNW_004624786:8,589,687...8,594,059 JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 involved_in ISO (PMID:11679576) UniProt PMID:11679576 NCBI chrNW_004624824:2,215,337...2,259,696
Ensembl chrNW_004624824:2,214,240...2,259,696 		JBrowse link
G Gch1 GTP cyclohydrolase 1 involved_in ISO (PMID:12607127), (PMID:7678411), (PMID:9445252) UniProt PMID:7678411 PMID:9445252 PMID:12607127 NCBI chrNW_004624731:14,459,164...14,502,485
Ensembl chrNW_004624731:14,459,303...14,500,429 		JBrowse link
G Hmgb1 high mobility group box 1 ISO RGD PMID:18004227 RGD:2316773 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Il23r interleukin 23 receptor involved_in ISO (PMID:12023369) BHF-UCL PMID:12023369 NCBI chrNW_004624742:27,899,934...27,954,145
Ensembl chrNW_004624742:27,901,071...27,941,109 		JBrowse link
G Kynu kynureninase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624732:42,627,789...42,751,037
Ensembl chrNW_004624732:42,627,715...42,753,165 		JBrowse link
G LOC101700851 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:10,176,865...10,181,725
Ensembl chrNW_004624802:10,176,919...10,181,657 		JBrowse link
G LOC101722087 interferon-induced transmembrane protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:22,074,711...22,096,092 JBrowse link
G LOC101722444 interferon-induced transmembrane protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:22,101,246...22,107,574 JBrowse link
G LOC101722790 interferon-induced transmembrane protein 2-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:22,128,395...22,129,653 JBrowse link
G Mefv MEFV innate immunity regulator, pyrin involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624824:1,035,172...1,047,632
Ensembl chrNW_004624824:1,035,094...1,047,678 		JBrowse link
G Nub1 negative regulator of ubiquitin like proteins 1 involved_in ISO (PMID:16707496) UniProt PMID:16707496 NCBI chrNW_004624800:5,314,203...5,345,301
Ensembl chrNW_004624800:5,315,381...5,345,801 		JBrowse link
G Sec61a1 SEC61 translocon subunit alpha 1 ISO RGD PMID:16604358 RGD:2312768 NCBI chrNW_004624961:466,234...477,880
Ensembl chrNW_004624961:467,656...477,884 		JBrowse link
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting involved_in ISO (PMID:26735137) UniProt PMID:26735137 NCBI chrNW_004624828:2,285,577...2,293,307
Ensembl chrNW_004624828:2,287,275...2,292,199 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9261342) Ensembl
MGI		 PMID:9261342 GO_REF:0000107 NCBI chrNW_004624823:6,612,452...6,625,047
Ensembl chrNW_004624823:6,612,452...6,625,300 		JBrowse link
G Slc22a5 solute carrier family 22 member 5 involved_in ISO (PMID:20722056)
(MGI:7339320|PMID:20722056)		 UniProt PMID:20722056 MGI:7339320 NCBI chrNW_004624733:39,690,958...39,727,503
Ensembl chrNW_004624733:39,698,456...39,808,718 		JBrowse link
G Slc30a8 solute carrier family 30 member 8 ISO RGD PMID:19243577 RGD:2315023 NCBI chrNW_004624763:15,393,221...15,469,819
Ensembl chrNW_004624763:15,431,806...15,461,833 		JBrowse link
G Snca synuclein alpha involved_in ISO (PMID:19157893) UniProt PMID:19157893 NCBI chrNW_004624757:17,393,046...17,528,783
Ensembl chrNW_004624757:17,392,998...17,528,320 		JBrowse link
G Sp100 SP100 nuclear antigen involved_in ISO (PMID:8810287)
(PMID:9230084)		 BHF-UCL PMID:8810287 PMID:9230084 NCBI chrNW_004624843:3,982,920...4,058,081
Ensembl chrNW_004624843:3,983,040...4,061,930 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 involved_in ISO (PMID:11972023)
(MGI:7327234|PMID:11972023)		 UniProt PMID:11972023 MGI:7327234 NCBI chrNW_004624854:5,067,578...5,106,052
Ensembl chrNW_004624854:5,067,535...5,102,106 		JBrowse link
G Trim21 tripartite motif containing 21 involved_in ISO (PMID:26347139) UniProt PMID:26347139 NCBI chrNW_004624817:5,643,788...5,651,514
Ensembl chrNW_004624817:5,639,779...5,653,361 		JBrowse link
response to type III interferon term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting involved_in ISO (PMID:26735137) UniProt PMID:26735137 NCBI chrNW_004624828:2,285,577...2,293,307
Ensembl chrNW_004624828:2,287,275...2,292,199 		JBrowse link
RIG-I signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clpb ClpB family mitochondrial disaggregase involved_in ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004624817:4,593,823...4,735,573
Ensembl chrNW_004624817:4,593,639...4,735,091 		JBrowse link
G Lsm14a LSM14A mRNA processing body assembly factor acts_upstream_of_or_within ISO (PMID:22745163) MGI PMID:22745163 NCBI chrNW_004624794:8,913,278...9,035,652 JBrowse link
G Mavs mitochondrial antiviral signaling protein acts_upstream_of_or_within ISO (PMID:22745163) MGI PMID:22745163 NCBI chrNW_004624741:4,936,556...4,951,081
Ensembl chrNW_004624741:4,939,040...4,954,058 		JBrowse link
G Phb1 prohibitin 1 involved_in ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004624795:5,556,728...5,565,969
Ensembl chrNW_004624795:5,556,450...5,565,988 		JBrowse link
G Phb2 prohibitin 2 involved_in ISO (PMID:31522117) UniProt PMID:31522117 NCBI chrNW_004624860:3,599,435...3,605,016
Ensembl chrNW_004624860:3,599,687...3,604,872 		JBrowse link
G Rigi RNA sensor RIG-I involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624736:37,134,718...37,204,543
Ensembl chrNW_004624736:37,133,059...37,197,218 		JBrowse link
G Rnf135 ring finger protein 135 involved_in ISO (MGI:6152590|PMID:21147464), (MGI:6377978|PMID:28469175)
(PMID:23950712)
(PMID:28469175), (PMID:31006531)		 UniProt PMID:21147464 PMID:23950712 PMID:28469175 PMID:31006531 MGI:6152590 MGI:6377978 NCBI chrNW_004624875:221,206...231,178
Ensembl chrNW_004624875:220,771...232,394 		JBrowse link
G Trim25 tripartite motif containing 25 NOT|involved_in ISO (PMID:31006531) UniProt PMID:31006531 NCBI chrNW_004624795:11,967,908...11,986,707
Ensembl chrNW_004624795:11,971,610...11,986,608 		JBrowse link
stimulatory C-type lectin receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Clec7a C-type lectin domain containing 7A involved_in ISO (MGI:3844414|PMID:19136564) ARUK-UCL PMID:19136564 MGI:3844414 NCBI chrNW_004624752:26,871,556...26,885,778
Ensembl chrNW_004624752:26,871,292...26,891,910 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in ISO (MGI:3844414|PMID:19136564), (MGI:5300086|PMID:22041900) ARUK-UCL PMID:19136564 PMID:22041900 MGI:3844414 MGI:5300086 NCBI chrNW_004624746:5,678,057...5,824,663
Ensembl chrNW_004624746:5,682,666...5,821,855 		JBrowse link
G Syk spleen associated tyrosine kinase involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624868:1,654,079...1,738,648
Ensembl chrNW_004624868:1,653,997...1,701,391 		JBrowse link
G Tyrobp transmembrane immune signaling adaptor TYROBP involved_in ISO (PMID:9655483) UniProt PMID:9655483 NCBI chrNW_004624794:10,183,934...10,187,180
Ensembl chrNW_004624794:10,183,515...10,187,244 		JBrowse link
stimulatory killer cell immunoglobulin-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tyrobp transmembrane immune signaling adaptor TYROBP involved_in ISO (PMID:9655483) UniProt PMID:9655483 NCBI chrNW_004624794:10,183,934...10,187,180
Ensembl chrNW_004624794:10,183,515...10,187,244 		JBrowse link
susceptibility to natural killer cell mediated cytotoxicity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cadm1 cell adhesion molecule 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624784:10,595,876...10,933,024
Ensembl chrNW_004624784:10,591,824...10,932,981 		JBrowse link
G LOC101712173 poliovirus receptor homolog involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624907:1,582,636...1,596,528 JBrowse link
G Nectin2 nectin cell adhesion molecule 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624907:1,713,786...1,739,158
Ensembl chrNW_004624907:1,713,443...1,740,627 		JBrowse link
TIRAP-dependent toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tirap TIR domain containing adaptor protein involved_in ISO (PMID:11544529) BHF-UCL PMID:11544529 NCBI chrNW_004624812:433,540...445,517
Ensembl chrNW_004624812:439,319...446,646 		JBrowse link
toll-like receptor 2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:14660645) UniProt PMID:14660645 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 involved_in
acts_upstream_of_or_within		 ISO (PMID:10383454)
(PMID:10549626)		 BHF-UCL
MGI		 PMID:10383454 PMID:10549626 NCBI chrNW_004624946:613,392...618,459
Ensembl chrNW_004624946:613,890...618,445 		JBrowse link
G Lgals9 galectin 9 NOT|involved_in ISO (PMID:16116184) UniProt PMID:16116184 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G Nod2 nucleotide binding oligomerization domain containing 2 acts_upstream_of ISO (PMID:15220916) MGI PMID:15220916 NCBI chrNW_004624757:5,956,873...6,000,052
Ensembl chrNW_004624757:5,958,486...6,000,103 		JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:8,021,478...8,154,543
Ensembl chrNW_004624737:8,022,836...8,154,422 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (PMID:11894098) MGI PMID:11894098 NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890 		JBrowse link
G Tlr2 toll like receptor 2 involved_in ISO (PMID:17128265) BHF-UCL PMID:17128265 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in ISO (MGI:3656197|PMID:16633345) UniProt PMID:16633345 MGI:3656197 NCBI chrNW_004624755:24,976,375...24,995,150
Ensembl chrNW_004624755:24,976,361...25,001,397 		JBrowse link
toll-like receptor 3 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd86 CD86 molecule involved_in ISO (MGI:5645190|PMID:25158758) UniProt PMID:25158758 MGI:5645190 NCBI chrNW_004624912:350,201...432,410
Ensembl chrNW_004624912:350,157...426,712 		JBrowse link
G Colec12 collectin subfamily member 12 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624770:10,860,097...11,136,478
Ensembl chrNW_004624770:10,859,205...11,013,175 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5437532|PMID:22842346) UniProt PMID:22842346 MGI:5437532 NCBI chrNW_004624733:32,521,318...32,527,499 JBrowse link
G Lgals9 galectin 9 involved_in ISO PMID:25158758 UniProt PMID:25158758 RGD:10054077 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G Oas1 2'-5'-oligoadenylate synthetase 1 involved_in ISO (PMID:30078389) ARUK-UCL PMID:30078389 NCBI chrNW_004624747:19,428,994...19,434,512
Ensembl chrNW_004624747:19,428,833...19,434,550 		JBrowse link
G Rftn1 raftlin, lipid raft linker 1 acts_upstream_of_or_within ISO (PMID:21266579) MGI PMID:21266579 NCBI chrNW_004624821:1,561,845...1,763,654
Ensembl chrNW_004624821:1,562,778...1,751,345 		JBrowse link
G Scara3 scavenger receptor class A member 3 NOT|involved_in ISO (PMID:25204797) UniProt PMID:25204797 NCBI chrNW_004624758:22,454,181...22,488,431
Ensembl chrNW_004624758:22,454,213...22,488,452 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:8,975,216...8,982,825
Ensembl chrNW_004624786:8,974,587...9,007,986 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in ISO (PMID:12471095) UniProt PMID:12471095 NCBI chrNW_004624828:4,964,199...4,973,465
Ensembl chrNW_004624828:4,971,093...4,973,198 		JBrowse link
G Tlr3 toll like receptor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624769:16,925,969...16,945,250
Ensembl chrNW_004624769:16,925,984...16,941,196 		JBrowse link
G Tnf tumor necrosis factor involved_in ISO PMID:25158758 UniProt PMID:25158758 RGD:10054077 NCBI chrNW_004624754:24,623,059...24,625,647
Ensembl chrNW_004624754:24,623,425...24,625,531 		JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in ISO (MGI:3656197|PMID:16633345) UniProt PMID:16633345 MGI:3656197 NCBI chrNW_004624755:24,976,375...24,995,150
Ensembl chrNW_004624755:24,976,361...25,001,397 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:18,859,990...18,869,083
Ensembl chrNW_004624767:18,860,017...18,868,581 		JBrowse link
toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624743:33,372,023...33,374,438
Ensembl chrNW_004624743:33,367,898...33,373,922 		JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex involved_in ISO (PMID:26189595) UniProt PMID:26189595 NCBI chrNW_004624737:12,022,081...12,052,128
Ensembl chrNW_004624737:12,022,419...12,052,131 		JBrowse link
G Ecsit ECSIT signaling integrator involved_in ISO (PMID:25371197) UniProt PMID:25371197 NCBI chrNW_004624828:3,264,054...3,276,270
Ensembl chrNW_004624828:3,264,149...3,269,030 		JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:14660645) UniProt PMID:14660645 NCBI chrNW_004624776:7,858,400...7,862,716
Ensembl chrNW_004624776:7,793,259...7,863,184 		JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 acts_upstream_of_or_within ISO (PMID:10549626) MGI PMID:10549626 NCBI chrNW_004624946:613,392...618,459
Ensembl chrNW_004624946:613,890...618,445 		JBrowse link
G Irak2 interleukin 1 receptor associated kinase 2 involved_in ISO (PMID:17878161) UniProt PMID:17878161 NCBI chrNW_004624731:5,294,464...5,348,426
Ensembl chrNW_004624731:5,294,431...5,348,481 		JBrowse link
G Irf3 interferon regulatory factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624832:4,611,445...4,616,319
Ensembl chrNW_004624832:4,612,374...4,616,276 		JBrowse link
G Lgals9 galectin 9 NOT|involved_in ISO (PMID:16116184) UniProt PMID:16116184 NCBI chrNW_004624786:478,048...491,086 JBrowse link
G LOC101722352 TIR domain-containing adapter molecule 2 involved_in ISO (PMID:28630139) UniProt PMID:28630139 NCBI chrNW_004624733:6,304,454...6,341,827 JBrowse link
G Ly96 lymphocyte antigen 96 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624744:17,209,285...17,241,347
Ensembl chrNW_004624744:17,208,990...17,241,347 		JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase involved_in ISO (MGI:5913054|PMID:28098138) UniProt PMID:28098138 MGI:5913054 NCBI chrNW_004624886:4,029,318...4,168,797
Ensembl chrNW_004624886:4,027,178...4,168,902 		JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 involved_in ISO (PMID:25371197) UniProt PMID:25371197 NCBI chrNW_004624799:3,554,644...3,623,317
Ensembl chrNW_004624799:3,554,678...3,622,289 		JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624731:2,677,259...2,681,408
Ensembl chrNW_004624731:2,677,290...2,681,489 		JBrowse link
G Naglu N-acetyl-alpha-glucosaminidase acts_upstream_of_or_within ISO (PMID:29624734) MGI PMID:29624734 NCBI chrNW_004624795:1,553,582...1,558,110
Ensembl chrNW_004624795:1,553,037...1,558,197 		JBrowse link
G Nfkbia NFKB inhibitor alpha involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:18261938) TreeGrafter
MGI
Ensembl		 PMID:18261938 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624838:1,384,337...1,387,602
Ensembl chrNW_004624838:1,384,204...1,390,205 		JBrowse link
G Nmi N-myc and STAT interactor involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624866:4,230,258...4,263,156
Ensembl chrNW_004624866:4,229,535...4,263,688 		JBrowse link
G Oas1 2'-5'-oligoadenylate synthetase 1 involved_in ISO (PMID:30078389) ARUK-UCL PMID:30078389 NCBI chrNW_004624747:19,428,994...19,434,512
Ensembl chrNW_004624747:19,428,833...19,434,550 		JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:8,021,478...8,154,543
Ensembl chrNW_004624737:8,022,836...8,154,422 		JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624767:20,732,813...20,742,016
Ensembl chrNW_004624767:20,732,938...20,741,272 		JBrowse link
G Ripk2 receptor interacting serine/threonine kinase 2 acts_upstream_of_or_within ISO (PMID:11894098) MGI PMID:11894098 NCBI chrNW_004624744:2,194,339...2,227,498
Ensembl chrNW_004624744:2,201,319...2,226,890 		JBrowse link
G S100a14 S100 calcium binding protein A14 involved_in IEA TreeGrafter
Ensembl		 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624885:3,529,813...3,531,314
Ensembl chrNW_004624885:3,529,026...3,532,182 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:8,975,216...8,982,825
Ensembl chrNW_004624786:8,974,587...9,007,986 		JBrowse link
G Tbk1 TANK binding kinase 1 involved_in ISO (PMID:28747347) UniProt PMID:28747347 NCBI chrNW_004624802:3,861,821...3,914,061
Ensembl chrNW_004624802:3,862,709...3,914,028 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in ISO (PMID:12471095) UniProt PMID:12471095 NCBI chrNW_004624828:4,964,199...4,973,465
Ensembl chrNW_004624828:4,971,093...4,973,198 		JBrowse link
G Tirap TIR domain containing adaptor protein involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624812:433,540...445,517
Ensembl chrNW_004624812:439,319...446,646 		JBrowse link
G Tlr4 toll like receptor 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (PMID:25549946) MGI
Ensembl
TreeGrafter		 PMID:25549946 GO_REF:0000107 GO_REF:0000118 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Tmem126a transmembrane protein 126A acts_upstream_of_or_within ISO (PMID:25549946) MGI PMID:25549946 NCBI chrNW_004624845:4,264,497...4,272,973 JBrowse link
G Tnip3 TNFAIP3 interacting protein 3 involved_in ISO (PMID:17088249) UniProt PMID:17088249 NCBI chrNW_004624777:1,124,389...1,222,450
Ensembl chrNW_004624777:1,124,204...1,158,324 		JBrowse link
G Traf3 TNF receptor associated factor 3 involved_in ISO (PMID:18222170) UniProt PMID:18222170 NCBI chrNW_004624734:1,728,353...1,820,345
Ensembl chrNW_004624734:1,728,255...1,786,010 		JBrowse link
G Traf6 TNF receptor associated factor 6 involved_in ISO (PMID:25371197) UniProt PMID:25371197 NCBI chrNW_004624767:10,729,766...10,803,253
Ensembl chrNW_004624767:10,729,413...10,748,455 		JBrowse link
G Tril TLR4 interactor with leucine rich repeats involved_in ISO (PMID:19710467) UniProt PMID:19710467 NCBI chrNW_004624739:1,663,916...1,668,258
Ensembl chrNW_004624739:1,664,432...1,666,867 		JBrowse link
toll-like receptor 5 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tirap TIR domain containing adaptor protein NOT|involved_in ISO (MGI:3531416|PMID:12447442) BHF-UCL PMID:12447442 MGI:3531416 NCBI chrNW_004624812:433,540...445,517
Ensembl chrNW_004624812:439,319...446,646 		JBrowse link
G Tlr5 toll like receptor 5 involved_in ISO (PMID:17128265) BHF-UCL PMID:17128265 NCBI chrNW_004624835:5,495,723...5,503,462
Ensembl chrNW_004624835:5,500,461...5,503,034 		JBrowse link
toll-like receptor 7 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5437532|PMID:22842346) UniProt PMID:22842346 MGI:5437532 NCBI chrNW_004624733:32,521,318...32,527,499 JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:8,021,478...8,154,543
Ensembl chrNW_004624737:8,022,836...8,154,422 		JBrowse link
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:8,975,216...8,982,825
Ensembl chrNW_004624786:8,974,587...9,007,986 		JBrowse link
G Tlr7 toll like receptor 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624882:1,375,216...1,379,705 JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:18,859,990...18,869,083
Ensembl chrNW_004624767:18,860,017...18,868,581 		JBrowse link
toll-like receptor 8 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myd88 MYD88 innate immune signal transduction adaptor involved_in ISO (PMID:33718825) UniProt PMID:33718825 NCBI chrNW_004624731:2,677,259...2,681,408
Ensembl chrNW_004624731:2,677,290...2,681,489 		JBrowse link
G Tlr8 toll like receptor 8 involved_in ISO (PMID:12032557), (PMID:24942581), (PMID:33718825) UniProt PMID:12032557 PMID:24942581 PMID:33718825 NCBI chrNW_004624882:1,240,519...1,247,311
Ensembl chrNW_004624882:1,240,626...1,312,468 		JBrowse link
toll-like receptor 9 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Epg5 ectopic P-granules 5 autophagy tethering factor acts_upstream_of_positive_effect ISO (PMID:29130391) UniProt PMID:29130391 NCBI chrNW_004624778:9,490,744...9,614,289
Ensembl chrNW_004624778:9,491,258...9,614,299 		JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5437532|PMID:22842346) UniProt PMID:22842346 MGI:5437532 NCBI chrNW_004624733:32,521,318...32,527,499 JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (MGI:5486235|PMID:23372731) UniProt PMID:23372731 MGI:5486235 NCBI chrNW_004624750:7,222,306...7,303,809
Ensembl chrNW_004624750:7,219,251...7,303,834 		JBrowse link
G Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624737:8,021,478...8,154,543
Ensembl chrNW_004624737:8,022,836...8,154,422 		JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in ISO (MGI:3656197|PMID:16633345) UniProt PMID:16633345 MGI:3656197 NCBI chrNW_004624755:24,976,375...24,995,150
Ensembl chrNW_004624755:24,976,361...25,001,397 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624767:18,859,990...18,869,083
Ensembl chrNW_004624767:18,860,017...18,868,581 		JBrowse link
toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3b1 adaptor related protein complex 3 subunit beta 1 acts_upstream_of_or_within ISO (PMID:20847273) MGI PMID:20847273 NCBI chrNW_004624869:2,459,370...2,741,529
Ensembl chrNW_004624869:2,459,947...2,741,328 		JBrowse link
G Bcl10 BCL10 immune signaling adaptor involved_in ISO (PMID:16831874) UniProt PMID:16831874 NCBI chrNW_004624742:12,210,333...12,222,533
Ensembl chrNW_004624742:12,210,360...12,221,759 		JBrowse link
G Cd86 CD86 molecule acts_upstream_of_or_within ISO (PMID:19734906) MGI PMID:19734906 NCBI chrNW_004624912:350,201...432,410
Ensembl chrNW_004624912:350,157...426,712 		JBrowse link
G Fosl1 FOS like 1, AP-1 transcription factor subunit involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:30990796) Ensembl
MGI		 PMID:30990796 GO_REF:0000107 NCBI chrNW_004624767:20,519,054...20,525,311
Ensembl chrNW_004624767:20,519,313...20,524,554 		JBrowse link
G Irak3 interleukin 1 receptor associated kinase 3 ISO RGD PMID:27832756 RGD:34888235 NCBI chrNW_004624802:2,042,486...2,098,921
Ensembl chrNW_004624802:2,047,409...2,098,545 		JBrowse link
G LOC101703392 twinfilin-2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:6,004,706...6,020,876 JBrowse link
G LOC101707222 toll-like receptor 12 involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624764:16,546,107...16,548,950 JBrowse link
G Lrrc19 leucine rich repeat containing 19 involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:19679103) Ensembl
MGI		 PMID:19679103 GO_REF:0000107 NCBI chrNW_004624736:31,208,583...31,218,754
Ensembl chrNW_004624736:31,206,168...31,218,754 		JBrowse link
G Ly96 lymphocyte antigen 96 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624744:17,209,285...17,241,347
Ensembl chrNW_004624744:17,208,990...17,241,347 		JBrowse link
G Mapkapk2 MAPK activated protein kinase 2 involved_in ISO (MGI:3761050|PMID:17906627) UniProt PMID:17906627 MGI:3761050 NCBI chrNW_004624807:4,726,511...4,774,945
Ensembl chrNW_004624807:4,724,234...4,796,143 		JBrowse link
G Mapkapk3 MAPK activated protein kinase 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624730:4,446,815...4,492,753
Ensembl chrNW_004624730:4,446,850...4,476,630 		JBrowse link
G Nfkbiz NFKB inhibitor zeta involved_in ISO (PMID:23728777)
(PMID:25124037)		 MGI PMID:23728777 PMID:25124037 NCBI chrNW_004624789:15,612,311...15,623,878
Ensembl chrNW_004624789:15,612,335...15,624,152 		JBrowse link
G Plcg2 phospholipase C gamma 2 involved_in ISO (MGI:3844414|PMID:19136564) ARUK-UCL PMID:19136564 MGI:3844414 NCBI chrNW_004624746:5,678,057...5,824,663
Ensembl chrNW_004624746:5,682,666...5,821,855 		JBrowse link
G Rps6ka3 ribosomal protein S6 kinase A3 involved_in ISO (MGI:3761050|PMID:17906627) UniProt PMID:17906627 MGI:3761050 NCBI chrNW_004624829:4,978,181...5,087,493
Ensembl chrNW_004624829:4,983,282...5,087,485 		JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in ISO (PMID:12471095) UniProt PMID:12471095 NCBI chrNW_004624828:4,964,199...4,973,465
Ensembl chrNW_004624828:4,971,093...4,973,198 		JBrowse link
G Tifab TIFA inhibitor acts_upstream_of_negative_effect ISO (PMID:26458771) MGI PMID:26458771 NCBI chrNW_004624733:11,578,934...11,587,250 JBrowse link
G Tlr1 toll like receptor 1 involved_in ISO
IEA		 RGD
InterPro
TreeGrafter		 PMID:16973131 GO_REF:0000002 GO_REF:0000118 RGD:1643119 NCBI chrNW_004624840:7,287,772...7,349,282
Ensembl chrNW_004624840:7,287,781...7,290,162 		JBrowse link
G Tlr2 toll like receptor 2 involved_in IEA
ISO		 TreeGrafter
InterPro
UniProt
RGD		 PMID:16973131 PMID:18353287 GO_REF:0000002 GO_REF:0000104 GO_REF:0000118 RGD:1643119 RGD:5684896 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
G Tlr3 toll like receptor 3 involved_in ISO
IEA		 RGD
InterPro
Ensembl
TreeGrafter		 PMID:16973131 GO_REF:0000002 GO_REF:0000107 GO_REF:0000118 RGD:1643119 NCBI chrNW_004624769:16,925,969...16,945,250
Ensembl chrNW_004624769:16,925,984...16,941,196 		JBrowse link
G Tlr4 toll like receptor 4 involved_in ISO
IEA		 RGD
InterPro
Ensembl		 PMID:16973131 GO_REF:0000002 GO_REF:0000107 RGD:1643119 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Tlr5 toll like receptor 5 involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624835:5,495,723...5,503,462
Ensembl chrNW_004624835:5,500,461...5,503,034 		JBrowse link
G Tlr6 toll like receptor 6 ISO RGD PMID:16973131 PMID:18353287 RGD:1643119 RGD:5684896 NCBI chrNW_004624840:7,323,022...7,349,334 JBrowse link
G Tlr7 toll like receptor 7 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624882:1,375,216...1,379,705 JBrowse link
G Tlr8 toll like receptor 8 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624882:1,240,519...1,247,311
Ensembl chrNW_004624882:1,240,626...1,312,468 		JBrowse link
G Traf3 TNF receptor associated factor 3 involved_in ISO (MGI:4839450|PMID:16306937) UniProt PMID:16306937 MGI:4839450 NCBI chrNW_004624734:1,728,353...1,820,345
Ensembl chrNW_004624734:1,728,255...1,786,010 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:16415873) InterPro
MGI		 PMID:16415873 GO_REF:0000002 NCBI chrNW_004624767:18,859,990...18,869,083
Ensembl chrNW_004624767:18,860,017...18,868,581 		JBrowse link
toll-like receptor TLR1:TLR2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scimp SLP adaptor and CSK interacting membrane protein involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624786:8,975,216...8,982,825
Ensembl chrNW_004624786:8,974,587...9,007,986 		JBrowse link
toll-like receptor TLR6:TLR2 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tlr2 toll like receptor 2 involved_in ISO (PMID:23626692) ComplexPortal PMID:23626692 NCBI chrNW_004624858:4,931,820...4,984,175
Ensembl chrNW_004624858:4,979,485...4,981,833 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO (PMID:23626692) ComplexPortal PMID:23626692 NCBI chrNW_004624840:7,323,022...7,349,334 JBrowse link
TRAM-dependent toll-like receptor 4 signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LOC101722352 TIR domain-containing adapter molecule 2 involved_in ISO (PMID:22685567)
(PMID:19412184)		 UniProt PMID:19412184 PMID:22685567 NCBI chrNW_004624733:6,304,454...6,341,827 JBrowse link
G Prkce protein kinase C epsilon involved_in ISO (MGI:3652658|PMID:16757566) UniProt PMID:16757566 MGI:3652658 NCBI chrNW_004624738:27,118,764...27,630,733
Ensembl chrNW_004624738:27,118,145...27,627,606 		JBrowse link
G Rab11fip2 RAB11 family interacting protein 2 involved_in ISO (PMID:30883606) UniProt PMID:30883606 NCBI chrNW_004624737:28,633,815...28,675,773
Ensembl chrNW_004624737:28,634,079...28,686,886 		JBrowse link
TRIF-dependent toll-like receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd274 CD274 molecule involved_in ISO (PMID:36232715) UniProt PMID:36232715 NCBI chrNW_004624736:9,991,851...10,017,047
Ensembl chrNW_004624736:9,996,156...10,013,814 		JBrowse link
G Cd300lf CD300 molecule like family member f involved_in ISO (PMID:22043923) UniProt PMID:22043923 NCBI chrNW_004624801:4,573,010...4,587,632
Ensembl chrNW_004624801:4,573,010...4,587,592 		JBrowse link
G Cd40 CD40 molecule involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624790:8,475,640...8,485,927
Ensembl chrNW_004624790:8,476,158...8,485,856 		JBrowse link
G Irf3 interferon regulatory factor 3 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624832:4,611,445...4,616,319
Ensembl chrNW_004624832:4,612,374...4,616,276 		JBrowse link
G LOC101722352 TIR domain-containing adapter molecule 2 involved_in IEA TreeGrafter
InterPro		 GO_REF:0000002 GO_REF:0000118 NCBI chrNW_004624733:6,304,454...6,341,827 JBrowse link
G Ticam1 toll like receptor adaptor molecule 1 involved_in ISO (MGI:3718934|PMID:17658277)
(PMID:25636800)		 ParkinsonsUK-UCL
CACAO		 PMID:17658277 PMID:25636800 MGI:3718934 NCBI chrNW_004624828:4,964,199...4,973,465
Ensembl chrNW_004624828:4,971,093...4,973,198 		JBrowse link
G Tlr4 toll like receptor 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624760:17,596,516...17,608,955
Ensembl chrNW_004624760:17,598,630...17,609,120 		JBrowse link
G Tlr6 toll like receptor 6 involved_in ISO (MGI:4438693|PMID:20037584) ARUK-UCL PMID:20037584 MGI:4438693 NCBI chrNW_004624840:7,323,022...7,349,334 JBrowse link
type I interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac4 histone deacetylase 4 involved_in ISO (PMID:31127039) UniProt PMID:31127039 NCBI chrNW_004624847:3,846,196...4,101,537
Ensembl chrNW_004624847:3,845,858...4,101,487 		JBrowse link
G Ifih1 interferon induced with helicase C domain 1 acts_upstream_of_or_within ISO (PMID:28031478) MGI PMID:28031478 NCBI chrNW_004624732:3,187,791...3,248,795
Ensembl chrNW_004624732:3,187,791...3,250,981 		JBrowse link
G Ifnar1 interferon alpha and beta receptor subunit 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624745:21,545,846...21,569,719
Ensembl chrNW_004624745:21,546,007...21,572,776 		JBrowse link
G Ifnar2 interferon alpha and beta receptor subunit 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624745:21,434,234...21,470,099
Ensembl chrNW_004624745:21,433,758...21,468,889 		JBrowse link
G Ifnb1 interferon beta 1 involved_in ISO (MGI:5792628|PMID:27129230)
(PMID:18035482), (PMID:33581076)		 UniProt
BHF-UCL		 PMID:18035482 PMID:27129230 PMID:33581076 MGI:5792628 NCBI chrNW_004624736:25,099,061...25,099,746 JBrowse link
G Irak1 interleukin 1 receptor associated kinase 1 involved_in ISO (PMID:23633945) BHF-UCL PMID:23633945 NCBI chrNW_004624946:613,392...618,459
Ensembl chrNW_004624946:613,890...618,445 		JBrowse link
G Irf3 interferon regulatory factor 3 involved_in ISO (MGI:5792628|PMID:27129230) UniProt PMID:27129230 MGI:5792628 NCBI chrNW_004624832:4,611,445...4,616,319
Ensembl chrNW_004624832:4,612,374...4,616,276 		JBrowse link
G Irf7 interferon regulatory factor 7 involved_in ISO (MGI:5792628|PMID:27129230) UniProt PMID:27129230 MGI:5792628 NCBI chrNW_004624766:21,850,211...21,853,189 JBrowse link
G Jak1 Janus kinase 1 involved_in ISO (PMID:7532278), (PMID:8232552) UniProt PMID:7532278 PMID:8232552 NCBI chrNW_004624742:29,631,391...29,723,981
Ensembl chrNW_004624742:29,689,965...29,723,981 		JBrowse link
G LOC101722087 interferon-induced transmembrane protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:22,074,711...22,096,092 JBrowse link
G LOC101722444 interferon-induced transmembrane protein 3 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:22,101,246...22,107,574 JBrowse link
G LOC101722790 interferon-induced transmembrane protein 2-like involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624766:22,128,395...22,129,653 JBrowse link
G Myd88 MYD88 innate immune signal transduction adaptor involved_in ISO (PMID:23633945) BHF-UCL PMID:23633945 NCBI chrNW_004624731:2,677,259...2,681,408
Ensembl chrNW_004624731:2,677,290...2,681,489 		JBrowse link
G Oas1 2'-5'-oligoadenylate synthetase 1 involved_in ISO (PMID:28640813) ARUK-UCL PMID:28640813 NCBI chrNW_004624747:19,428,994...19,434,512
Ensembl chrNW_004624747:19,428,833...19,434,550 		JBrowse link
G Oas2 2'-5'-oligoadenylate synthetase 2 involved_in ISO (MGI:6094812|PMID:29117179) UniProt PMID:29117179 MGI:6094812 NCBI chrNW_004624747:19,373,645...19,397,289
Ensembl chrNW_004624747:19,378,418...19,396,913 		JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (PMID:22783022) BHF-UCL PMID:22783022 NCBI chrNW_004624894:300,027...388,397
Ensembl chrNW_004624894:301,082...362,683 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624854:5,067,578...5,106,052
Ensembl chrNW_004624854:5,067,535...5,102,106 		JBrowse link
G Stat2 signal transducer and activator of transcription 2 involved_in IEA TreeGrafter GO_REF:0000118 NCBI chrNW_004624802:11,645,851...11,662,812
Ensembl chrNW_004624802:11,648,020...11,660,216 		JBrowse link
G Trex1 three prime repair exonuclease 1 acts_upstream_of_or_within ISO (PMID:28351661) MGI PMID:28351661 NCBI chrNW_004624730:2,431,270...2,433,010
Ensembl chrNW_004624730:2,431,999...2,432,959 		JBrowse link
G Trim65 tripartite motif containing 65 acts_upstream_of_or_within ISO (PMID:28031478) MGI PMID:28031478 NCBI chrNW_004624801:5,779,009...5,783,542 JBrowse link
G Tyk2 tyrosine kinase 2 involved_in ISO (PMID:8232552) UniProt PMID:8232552 NCBI chrNW_004624828:2,499,811...2,518,817
Ensembl chrNW_004624828:2,500,339...2,517,694 		JBrowse link
type II interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpx hemopexin involved_in
acts_upstream_of		 IEA
ISO		 (PMID:18641331) Ensembl
MGI		 PMID:18641331 GO_REF:0000107 NCBI chrNW_004624817:7,947,554...7,957,553
Ensembl chrNW_004624817:7,947,639...7,957,462 		JBrowse link
G Ifng interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:163,261...166,534
Ensembl chrNW_004624802:163,261...166,534 		JBrowse link
G Ifngr1 interferon gamma receptor 1 involved_in IEA InterPro GO_REF:0000002 NCBI chrNW_004624886:618,372...640,954
Ensembl chrNW_004624886:618,289...642,928 		JBrowse link
G Ifngr2 interferon gamma receptor 2 involved_in IEA GOC GO_REF:0000108 NCBI chrNW_004624745:21,628,968...21,652,305
Ensembl chrNW_004624745:21,628,797...21,651,652 		JBrowse link
G Irf1 interferon regulatory factor 1 involved_in ISO (MGI:5317515|PMID:21909274) UniProt PMID:21909274 MGI:5317515 NCBI chrNW_004624733:39,596,565...39,603,428
Ensembl chrNW_004624733:39,596,501...39,603,526 		JBrowse link
G Jak1 Janus kinase 1 involved_in ISO (PMID:8232552) UniProt PMID:8232552 NCBI chrNW_004624742:29,631,391...29,723,981
Ensembl chrNW_004624742:29,689,965...29,723,981 		JBrowse link
G Jak2 Janus kinase 2 involved_in ISO PMID:11536325 BHF-UCL PMID:11536325 RGD:8553830 NCBI chrNW_004624736:9,724,876...9,827,364
Ensembl chrNW_004624736:9,724,369...9,830,365 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 involved_in ISO (MGI:5493216|PMID:12138178)
(PMID:26479788)
(PMID:21268089)		 UniProt
BHF-UCL		 PMID:12138178 PMID:21268089 PMID:26479788 MGI:5493216 NCBI chrNW_004624854:5,067,578...5,106,052
Ensembl chrNW_004624854:5,067,535...5,102,106 		JBrowse link
G Tp53 tumor protein p53 involved_in ISO (MGI:5490676|PMID:23629966) CAFA PMID:23629966 MGI:5490676 NCBI chrNW_004624786:10,266,316...10,282,664
Ensembl chrNW_004624786:10,263,518...10,271,218 		JBrowse link
G Tyk2 tyrosine kinase 2 involved_in ISO (PMID:8232552) UniProt PMID:8232552 NCBI chrNW_004624828:2,499,811...2,518,817
Ensembl chrNW_004624828:2,500,339...2,517,694 		JBrowse link
type III interferon-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifng interferon gamma involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624802:163,261...166,534
Ensembl chrNW_004624802:163,261...166,534 		JBrowse link
G Ifngr1 interferon gamma receptor 1 involved_in ISO (PMID:20015550) UniProt PMID:20015550 NCBI chrNW_004624886:618,372...640,954
Ensembl chrNW_004624886:618,289...642,928 		JBrowse link
G Ifngr2 interferon gamma receptor 2 involved_in IEA Ensembl GO_REF:0000107 NCBI chrNW_004624745:21,628,968...21,652,305
Ensembl chrNW_004624745:21,628,797...21,651,652 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 15093
    immune system process 2103
      immune response 1306
        innate immune response 664
          RNAi-mediated antiviral immune response + 0
          age-related resistance + 0
          antibacterial innate immune response 8
          antifungal innate immune response + 12
          antiviral innate immune response 47
          complement activation, alternative pathway + 12
          complement activation, lectin pathway + 10
          hemolymph coagulation 0
          induced systemic resistance + 1
          innate immune response in mucosa 10
          innate immunity memory response + 0
          melanization defense response + 0
          natural killer cell mediated immunity + 53
          negative regulation of innate immune response + 72
          plant-type hypersensitive response + 0
          positive regulation of innate immune response + 309
          regulation of innate immune response + 371
          response to type I interferon + 61
          response to type II interferon + 142
          response to type III interferon + 4
Path 2
Term Annotations click to browse term
  biological_process 15093
    response to stimulus 8166
      response to biotic stimulus 1361
        response to external biotic stimulus 1317
          response to other organism 1314
            defense response to other organism 906
              defense response to symbiont 802
                innate immune response 664
                  RNAi-mediated antiviral immune response + 0
                  age-related resistance + 0
                  antibacterial innate immune response 8
                  antifungal innate immune response + 12
                  antiviral innate immune response 47
                  complement activation, alternative pathway + 12
                  complement activation, lectin pathway + 10
                  hemolymph coagulation 0
                  induced systemic resistance + 1
                  innate immune response in mucosa 10
                  innate immunity memory response + 0
                  melanization defense response + 0
                  natural killer cell mediated immunity + 53
                  negative regulation of innate immune response + 72
                  plant-type hypersensitive response + 0
                  positive regulation of innate immune response + 309
                  regulation of innate immune response + 371
                  response to type I interferon + 61
                  response to type II interferon + 142
                  response to type III interferon + 4
paths to the root