LOC101700852 (guanylate-binding protein 1) - Rat Genome Database

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Gene: LOC101700852 (guanylate-binding protein 1) Heterocephalus glaber
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Symbol: LOC101700852
Name: guanylate-binding protein 1
RGD ID: 18929310
Description: ENCODES a protein that exhibits GTP binding (inferred); GTPase activity (inferred); INVOLVED IN cellular response to type II interferon (inferred); innate immune response (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: GBP1; interferon-induced guanylate-binding protein 1
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247428,581,575 - 8,595,931 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_004841317   ⟹   XP_004841374
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247428,581,575 - 8,595,931 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004841374 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB08368 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00100043581
GenBank Protein JAN97329 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_004841374   ⟸   XM_004841317
- UniProtKB: G5BGF7 (UniProtKB/TrEMBL),   A0A0P6J4D1 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00100035406 UniProtKB/TrEMBL
Ensembl Transcript ENSHGLT00100093122 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.300 UniProtKB/TrEMBL
  Guanylate-binding protein, C-terminal domain UniProtKB/TrEMBL
InterPro G_GB1_RHD3_dom UniProtKB/TrEMBL
  GBP_C UniProtKB/TrEMBL
  Guanylate-bd/ATL_C UniProtKB/TrEMBL
  Guanylate-bd_C_sf UniProtKB/TrEMBL
  Guanylate-bd_N UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
KEGG Report hgl:101700852 UniProtKB/TrEMBL
NCBI Gene LOC101700852 ENTREZGENE
PANTHER GUANYLATE BINDING PROTEIN UniProtKB/TrEMBL
  GUANYLATE-BINDING PROTEIN 3 UniProtKB/TrEMBL
Pfam GBP UniProtKB/TrEMBL
  GBP_C UniProtKB/TrEMBL
PROSITE G_GB1_RHD3 UniProtKB/TrEMBL
Superfamily-SCOP SSF48340 UniProtKB/TrEMBL
  SSF52540 UniProtKB/TrEMBL
UniProt A0A0P6J4D1 ENTREZGENE, UniProtKB/TrEMBL
  G5BGF7 ENTREZGENE, UniProtKB/TrEMBL