LOC101703789 (high mobility group protein B3) - Rat Genome Database

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Gene: LOC101703789 (high mobility group protein B3) Heterocephalus glaber
Analyze
Symbol: LOC101703789
Name: high mobility group protein B3
RGD ID: 18921743
Description: ENCODES a protein that exhibits DNA binding (inferred); DNA binding, bending (inferred); INVOLVED IN innate immune response (inferred); regulation of transcription by RNA polymerase II (inferred); FOUND IN chromosome (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462480111,075,521 - 11,078,065 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
chromosome  (IEA)
nucleus  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:21993625   PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_021241255   ⟹   XP_021096914
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462480111,075,521 - 11,078,065 (+)NCBI
Protein Sequences
Protein RefSeqs XP_021096914 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EHB09362 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: XP_021096914   ⟸   XM_021241255
- UniProtKB: G5BJA1 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Gene3D-CATH High mobility group box domain UniProtKB/TrEMBL
InterPro HMG_box_dom UniProtKB/TrEMBL
  HMG_box_dom_sf UniProtKB/TrEMBL
  HMG_boxA_CS UniProtKB/TrEMBL
KEGG Report hgl:101703789 UniProtKB/TrEMBL
NCBI Gene LOC101703789 ENTREZGENE
PANTHER HIGH MOBILITY GROUP PROTEIN B3 UniProtKB/TrEMBL
  HIGH MOBILITY GROUP PROTEIN DSP1 UniProtKB/TrEMBL
Pfam HMG_box UniProtKB/TrEMBL
  HMG_box_2 UniProtKB/TrEMBL
PRINTS HIGHMOBLTY12 UniProtKB/TrEMBL
PROSITE HMG_BOX_1 UniProtKB/TrEMBL
  HMG_BOX_2 UniProtKB/TrEMBL
SMART HMG UniProtKB/TrEMBL
Superfamily-SCOP HMG-box UniProtKB/TrEMBL
UniProt G5BJA1 ENTREZGENE, UniProtKB/TrEMBL