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ONTOLOGY REPORT - ANNOTATIONS

Term:response to interferon-gamma
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Accession:GO:0034341 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-gamma stimulus. Interferon-gamma is also known as type II interferon.
Synonyms:exact_synonym: response to immune interferon;   response to type II IFN;   response to type II interferon

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response to interferon-gamma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07015596.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr14:65,152,594...65,153,013 JBrowse link
G AABR07021463.1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr13:73,661,131...73,661,553 JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 IEP RGD PMID:18433458 RGD:2315954 NCBI chr 3:5,519,921...5,558,390
Ensembl chr 3:5,519,990...5,558,166 		JBrowse link
G Bst2 bone marrow stromal cell antigen 2 ISS
ISO		 GO_REF:0000024
(MGI:5448513|PMID:21919738)		 UniProt
RGD		 PMID:21919738 GO_REF:0000024 MGI:5448513 NCBI chr16:19,938,781...19,942,353
Ensembl chr16:19,938,784...19,942,353 		JBrowse link
G Calcoco2 calcium binding and coiled-coil domain 2 ISO (PMID:9230084) RGD PMID:9230084 NCBI chr10:83,935,087...83,963,750 JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IDA PMID:10477596 BHF-UCL PMID:10477596 RGD:8553666 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315 		JBrowse link
G Cd40 CD40 molecule IEP
IBA		 with tumor necrosis factor alpha
PMID:21873635		 RGD
GO_Central		 PMID:10403401, PMID:21873635 RGD:634252, RGD:13792537 NCBI chr 3:161,519,789...161,534,943
Ensembl chr 3:161,519,743...161,534,704 		JBrowse link
G Cd74 CD74 molecule ISO
IEA		 (PMID:32855215)
(MGI:6478071|PMID:32855215)
GO_REF:0000107		 RGD
Ensembl		 PMID:32855215 GO_REF:0000107 MGI:6478071 NCBI chr18:56,071,420...56,080,851
Ensembl chr18:56,071,478...56,080,849 		JBrowse link
G Cd86 CD86 molecule IEP RGD PMID:16839612 RGD:2313438 NCBI chr11:67,060,305...67,117,990
Ensembl chr11:67,082,193...67,118,795 		JBrowse link
G Ciita class II, major histocompatibility complex, transactivator ISO (PMID:19041327), (PMID:32855215)
(MGI:3621255|PMID:16280321), (MGI:6478071|PMID:32855215)		 RGD PMID:16280321 PMID:19041327 PMID:32855215 MGI:3621255 MGI:6478071 NCBI chr10:5,212,621...5,260,641
Ensembl chr10:5,213,350...5,260,608 		JBrowse link
G Cited1 Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 ISS
ISO		 GO_REF:0000024
(MGI:1312962|PMID:9811838)		 UniProt
RGD		 PMID:9811838 GO_REF:0000024 MGI:1312962 NCBI chr  X:72,128,996...72,133,692
Ensembl chr  X:72,128,994...72,133,692 		JBrowse link
G Cxcl16 C-X-C motif chemokine ligand 16 ISO (PMID:18373975) RGD PMID:18373975 NCBI chr10:57,060,005...57,064,600
Ensembl chr10:57,060,007...57,064,600 		JBrowse link
G Cyp27b1 cytochrome P450, family 27, subfamily b, polypeptide 1 ISO (PMID:9282826) RGD PMID:9282826 NCBI chr 7:70,333,150...70,340,006
Ensembl chr 7:70,335,061...70,340,005 		JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 ISO (PMID:11679576) RGD PMID:11679576 NCBI chr10:11,059,701...11,085,186
Ensembl chr10:11,060,313...11,085,210 		JBrowse link
G Gch1 GTP cyclohydrolase 1 ISO (PMID:12607127), (PMID:7678411), (PMID:9445252) RGD PMID:7678411 PMID:9445252 PMID:12607127 NCBI chr15:23,935,011...23,968,971
Ensembl chr15:23,934,585...23,969,011 		JBrowse link
G Hmgb1 high mobility group box 1 IMP RGD PMID:18004227 RGD:2316773 NCBI chr12:7,082,529...7,090,246
Ensembl chr16:37,500,017...37,502,237 		JBrowse link
G Ifitm1 interferon induced transmembrane protein 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:213,765,825...213,767,841
Ensembl chr 1:213,766,758...213,767,815 		JBrowse link
G Ifitm2 interferon induced transmembrane protein 2 ISO
IBA		 (PMID:21253575)
PMID:21873635		 RGD PMID:21253575, PMID:21873635 RGD:13792537 NCBI chr 1:213,750,219...213,751,399
Ensembl chr 1:213,750,192...213,751,405 		JBrowse link
G Ifitm3 interferon induced transmembrane protein 3 ISO
IBA		 (PMID:21253575)
PMID:21873635		 RGD PMID:21253575, PMID:21873635 RGD:13792537 NCBI chr 1:213,810,712...213,811,821
Ensembl chr 1:213,810,696...213,811,901 		JBrowse link
G Ifitm6 interferon induced transmembrane protein 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:213,816,966...213,856,570
Ensembl chr 1:213,817,312...213,818,222 		JBrowse link
G Il23r interleukin 23 receptor ISO (PMID:12023369) RGD PMID:12023369 NCBI chr 4:98,203,788...98,306,729
Ensembl chr 4:98,203,958...98,305,173 		JBrowse link
G Kynu kynureninase ISO (PMID:9291104) RGD PMID:9291104 NCBI chr 3:28,416,926...28,566,939
Ensembl chr 3:28,416,954...28,566,928 		JBrowse link
G Mefv MEFV innate immuity regulator, pyrin ISO
ISS		 (PMID:26347139)
GO_REF:0000024		 RGD
UniProt		 PMID:26347139 GO_REF:0000024 NCBI chr10:12,045,813...12,056,229
Ensembl chr10:12,046,541...12,056,311 		JBrowse link
G Nub1 negative regulator of ubiquitin-like proteins 1 ISO (PMID:16707496) RGD PMID:16707496 NCBI chr 4:6,950,870...6,981,400
Ensembl chr 4:6,951,478...6,978,073 		JBrowse link
G RGD1561738 similar to interferon induced transmembrane protein 2 (1-8D) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:73,661,005...73,661,699 JBrowse link
G RGD1565332 similar to interferon induced transmembrane protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:65,152,594...65,153,013 JBrowse link
G RT1-Ba RT1 class II, locus Ba IEA
ISO		 GO_REF:0000107
(MGI:5009185|PMID:11465104)		 Ensembl
RGD		 PMID:11465104 GO_REF:0000107 MGI:5009185 NCBI chr20:4,066,133...4,070,726
Ensembl chr20:4,066,132...4,070,721 		JBrowse link
G RT1-Db1 RT1 class II, locus Db1 ISO (MGI:5009185|PMID:11465104) RGD PMID:11465104 MGI:5009185 NCBI chr20:4,087,621...4,097,190
Ensembl chr20:4,087,618...4,097,190 		JBrowse link
G Sec61a1 SEC61 translocon subunit alpha 1 IEP RGD PMID:16604358 RGD:2312768 NCBI chr 4:120,453,577...120,467,932
Ensembl chr 4:120,453,581...120,467,932 		JBrowse link
G Shfl shiftless antiviral inhibitor of ribosomal frameshifting IEA
ISS
ISO		 GO_REF:0000107
GO_REF:0000024
(PMID:26735137)		 Ensembl
UniProt
RGD		 PMID:26735137 GO_REF:0000024 GO_REF:0000107 NCBI chr 8:21,890,214...21,896,045
Ensembl chr 8:21,890,319...21,896,031 		JBrowse link
G Slc11a1 solute carrier family 11 member 1 IEA
ISO		 GO_REF:0000107
(MGI:1095423|PMID:9261342)		 Ensembl
RGD		 PMID:9261342 GO_REF:0000107 MGI:1095423 NCBI chr 9:81,655,590...81,666,697
Ensembl chr 9:81,655,629...81,666,706 		JBrowse link
G Slc30a8 solute carrier family 30 member 8 IEP RGD PMID:19243577 RGD:2315023 NCBI chr 7:91,832,988...91,869,329
Ensembl chr 7:91,832,988...91,867,300 		JBrowse link
G Snca synuclein alpha ISO (PMID:19157893) RGD PMID:19157893 NCBI chr 4:90,782,412...90,883,236
Ensembl chr 4:90,782,374...90,882,285 		JBrowse link
G Sp100 SP100 nuclear antigen ISO (PMID:8810287), (PMID:9230084) RGD PMID:8810287 PMID:9230084 NCBI chr 9:92,675,103...92,718,489
Ensembl chr 9:92,681,078...92,717,929 		JBrowse link
G Trim21 tripartite motif-containing 21 ISO (PMID:26347139) RGD PMID:26347139 NCBI chr 1:167,686,148...167,708,735
Ensembl chr 1:167,686,173...167,708,714 		JBrowse link
G Ubd ubiquitin D IEA
IBA
ISO		 GO_REF:0000107
PMID:21873635
(PMID:16782901)
(PMID:17889673)		 Ensembl
RGD		 PMID:16782901 PMID:17889673, PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr20:1,876,175...1,878,126
Ensembl chr20:1,876,173...1,897,814 		JBrowse link
cellular response to interferon-gamma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 ISO (MGI:5489057|PMID:19014335) RGD PMID:19014335 MGI:5489057 NCBI chr15:93,612,968...93,622,322
Ensembl chr15:93,612,971...93,622,358 		JBrowse link
G Actg1 actin, gamma 1 ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr10:109,518,429...109,521,288
Ensembl chr 3:75,643,054...75,644,954
Ensembl chr10:75,643,054...75,644,954 		JBrowse link
G Actr2 actin related protein 2 ISO MGI:1921367 (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr14:104,338,486...104,375,840
Ensembl chr14:104,340,434...104,375,649 		JBrowse link
G Actr3 actin related protein 3 IEA
ISO		 GO_REF:0000107
MGI:1913963 (MGI:3828867|PMID:19144319)		 Ensembl
RGD		 PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr13:41,695,520...41,738,622
Ensembl chr13:41,695,183...41,738,658 		JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 IEP RGD PMID:18433458 RGD:2315954 NCBI chr 3:5,519,921...5,558,390
Ensembl chr 3:5,519,990...5,558,166 		JBrowse link
G Aif1 allograft inflammatory factor 1 IEP
ISO		 PMID:7769138
(PMID:9614071)		 RGD PMID:9614071, PMID:7769138 RGD:61535 NCBI chr20:5,161,350...5,167,176
Ensembl chr20:5,161,333...5,166,448 		JBrowse link
G Aqp4 aquaporin 4 ISO (PMID:17645239) RGD PMID:17645239 NCBI chr18:6,766,009...6,782,757
Ensembl chr18:6,765,945...6,782,996 		JBrowse link
G Arg2 arginase 2 IEP RGD PMID:11250887 RGD:4144048 NCBI chr 6:102,311,097...102,338,406
Ensembl chr 6:102,311,116...102,338,520 		JBrowse link
G Asl argininosuccinate lyase IEP with TNFalpha RGD PMID:11072090 RGD:4139899 NCBI chr12:30,160,922...30,178,348
Ensembl chr12:30,165,694...30,178,341 		JBrowse link
G Ass1 argininosuccinate synthase 1 IEP with TNFalpha RGD PMID:12589771, PMID:11072090 RGD:1599307, RGD:4139899 NCBI chr 3:10,327,411...10,375,847
Ensembl chr 3:10,327,414...10,375,826 		JBrowse link
G Capg capping actin protein, gelsolin like ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 4:100,395,693...100,419,447
Ensembl chr 4:100,407,658...100,419,446 		JBrowse link
G Casp1 caspase 1 ISO
IEA		 (PMID:11536016)
GO_REF:0000107		 RGD
Ensembl		 PMID:11536016 GO_REF:0000107 NCBI chr 8:2,605,743...2,614,637
Ensembl chr 8:2,604,962...2,614,631 		JBrowse link
G Ccl1 C-C motif chemokine ligand 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:69,534,976...69,537,836
Ensembl chr10:69,534,933...69,537,882 		JBrowse link
G Ccl11 C-C motif chemokine ligand 11 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:69,434,965...69,439,566
Ensembl chr10:69,434,941...69,439,575 		JBrowse link
G Ccl12 chemokine (C-C motif) ligand 12 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:69,476,866...69,478,416
Ensembl chr10:69,476,775...69,478,462 		JBrowse link
G Ccl17 C-C motif chemokine ligand 17 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,619,220...10,620,671
Ensembl chr19:10,619,220...10,620,671 		JBrowse link
G Ccl19 C-C motif chemokine ligand 19 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:58,181,025...58,182,969
Ensembl chr 5:58,181,026...58,183,017 		JBrowse link
G Ccl2 C-C motif chemokine ligand 2 IEP
IBA
ISO		 PMID:21873635
(MGI:3699670|PMID:14662900)
(PMID:9407497)		 RGD PMID:9407497 PMID:14662900, PMID:14512159, PMID:21873635 MGI:3699670, RGD:8548859, RGD:13792537 NCBI chr10:69,412,065...69,413,863
Ensembl chr10:69,412,017...69,413,870 		JBrowse link
G Ccl20 C-C motif chemokine ligand 20 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:88,918,359...88,921,017
Ensembl chr 9:88,918,433...88,921,001 		JBrowse link
G Ccl21 C-C motif chemokine ligand 21 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:58,197,678...58,198,782
Ensembl chr 5:58,197,680...58,198,782 		JBrowse link
G Ccl22 C-C motif chemokine ligand 22 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,674,189...10,681,145
Ensembl chr19:10,674,189...10,681,145 		JBrowse link
G Ccl24 C-C motif chemokine ligand 24 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:24,131,529...24,152,626
Ensembl chr12:24,148,567...24,152,625 		JBrowse link
G Ccl25 C-C motif chemokine ligand 25 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:2,429,492...2,438,928
Ensembl chr12:2,429,509...2,438,817 		JBrowse link
G Ccl26 C-C motif chemokine ligand 26 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:24,157,182...24,161,870
Ensembl chr12:24,158,766...24,161,869 		JBrowse link
G Ccl3 C-C motif chemokine ligand 3 ISO
IBA		 (PMID:9407497)
PMID:21873635		 RGD PMID:9407497, PMID:21873635 RGD:13792537 NCBI chr10:70,869,516...70,871,066
Ensembl chr10:70,869,513...70,871,066 		JBrowse link
G Ccl4 C-C motif chemokine ligand 4 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:70,870,926...70,886,357
Ensembl chr10:70,884,531...70,886,355 		JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO
IBA		 (PMID:9407497)
PMID:21873635		 RGD PMID:9407497, PMID:21873635 RGD:13792537 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315 		JBrowse link
G Ccl6 C-C motif chemokine ligand 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:70,798,118...70,802,750
Ensembl chr10:70,797,124...70,802,782 		JBrowse link
G Ccl7 C-C motif chemokine ligand 7 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:69,423,083...69,424,933
Ensembl chr10:69,423,086...69,424,979 		JBrowse link
G Ccl9 chemokine (C-C motif) ligand 9 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:70,783,426...70,788,372
Ensembl chr10:70,783,424...70,788,309 		JBrowse link
G Cd47 Cd47 molecule IMP PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr11:53,511,485...53,575,754
Ensembl chr11:53,514,595...53,575,175 		JBrowse link
G Cdc42 cell division cycle 42 ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300 		JBrowse link
G Cdc42ep2 CDC42 effector protein 2 ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 1:221,272,349...221,281,252
Ensembl chr 1:221,272,353...221,281,180 		JBrowse link
G Cdc42ep4 CDC42 effector protein 4 ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr10:102,244,680...102,269,272
Ensembl chr10:102,244,681...102,269,272 		JBrowse link
G Cfh complement factor H IEP RGD PMID:12121434 RGD:632369 NCBI chr13:56,979,155...57,080,540
Ensembl chr13:56,978,607...57,080,622 		JBrowse link
G Ciita class II, major histocompatibility complex, transactivator IEP RGD PMID:11071855 RGD:632488 NCBI chr10:5,212,621...5,260,641
Ensembl chr10:5,213,350...5,260,608 		JBrowse link
G Cldn1 claudin 1 IEP RGD PMID:18768927 RGD:11344890 NCBI chr11:77,815,216...77,830,373
Ensembl chr11:77,815,181...77,830,416 		JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,644,267...10,654,861
Ensembl chr19:10,644,244...10,653,800 		JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 IEP RGD PMID:12121434 RGD:632369
G Dapk1 death associated protein kinase 1 ISO (PMID:18995835)
(MGI:5466658|PMID:23071094)		 RGD PMID:18995835 PMID:23071094 MGI:5466658 NCBI chr17:4,297,038...4,454,941
Ensembl chr17:4,297,224...4,454,778 		JBrowse link
G Dapk3 death-associated protein kinase 3 ISO (PMID:18995835)
(MGI:5466658|PMID:23071094)		 RGD PMID:18995835 PMID:23071094 MGI:5466658 NCBI chr 7:11,392,436...11,400,855
Ensembl chr 7:11,392,437...11,400,805 		JBrowse link
G Edn1 endothelin 1 IEP RGD PMID:22301113 RGD:8662301 NCBI chr17:22,136,814...22,143,745
Ensembl chr17:22,137,324...22,143,324 		JBrowse link
G Eprs glutamyl-prolyl-tRNA synthetase ISO (PMID:15479637)
(MGI:5466658|PMID:23071094)		 RGD PMID:15479637 PMID:23071094 MGI:5466658 NCBI chr13:103,300,911...103,371,651
Ensembl chr13:103,300,932...103,371,577 		JBrowse link
G Evl Enah/Vasp-like ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 6:132,470,283...132,590,242
Ensembl chr 6:132,510,757...132,590,241 		JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:10029626 RGD:14700709 NCBI chr 1:252,589,785...252,624,790
Ensembl chr 1:252,589,785...252,624,790 		JBrowse link
G Faslg Fas ligand IEP RGD PMID:10029626 RGD:14700709 NCBI chr13:79,696,811...79,717,581
Ensembl chr13:79,698,445...79,705,705 		JBrowse link
G Fcar Fc fragment of IgA receptor ISO (PMID:25339672) RGD PMID:25339672 NCBI chr 1:73,230,392...73,263,462
Ensembl chr 1:73,230,390...73,264,302 		JBrowse link
G Flnb filamin B ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr15:18,750,152...18,883,019
Ensembl chr15:18,750,118...18,883,005 		JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase ISO (PMID:15479637) RGD PMID:15479637 NCBI chr 4:157,676,336...157,680,322
Ensembl chr 4:157,676,595...157,679,962 		JBrowse link
G Gbp1 guanylate binding protein 1 ISO
IBA		 (PMID:17266443), (PMID:21151871)
PMID:21873635
(MGI:4412460|PMID:18025219)		 RGD PMID:17266443 PMID:18025219 PMID:21151871, PMID:21873635 MGI:4412460, RGD:13792537 NCBI chr 2:248,343,334...248,423,402
Ensembl chr 2:248,398,917...248,409,570 		JBrowse link
G Gbp2 guanylate binding protein 2 IEA
IBA
ISO		 GO_REF:0000107
PMID:21873635
(MGI:4412460|PMID:18025219)
(PMID:17266443)		 Ensembl
RGD		 PMID:17266443 PMID:18025219, PMID:21873635 GO_REF:0000107 MGI:4412460, RGD:13792537 NCBI chr 2:248,276,795...248,293,784
Ensembl chr 2:248,276,709...248,293,784 		JBrowse link
G Gbp3 guanylate binding protein 3 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:248,450,908...248,491,258
Ensembl chr 2:248,451,547...248,484,100 		JBrowse link
G Gbp4 guanylate binding protein 4 ISO
IBA		 (PMID:17266443)
PMID:21873635
(MGI:4412460|PMID:18025219)		 RGD PMID:17266443 PMID:18025219, PMID:21873635 MGI:4412460, RGD:13792537 NCBI chr 2:248,249,232...248,263,104
Ensembl chr 2:248,249,468...248,263,168 		JBrowse link
G Gbp5 guanylate binding protein 5 ISO
IBA		 (PMID:17266443)
PMID:21873635
(MGI:4412460|PMID:18025219)		 RGD PMID:17266443 PMID:18025219, PMID:21873635 MGI:4412460, RGD:13792537 NCBI chr 2:248,178,441...248,196,873
Ensembl chr 2:248,178,389...248,197,160 		JBrowse link
G Gbp6 guanylate binding protein family member 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:5,927,568...5,954,923
Ensembl chr14:5,928,737...5,945,321 		JBrowse link
G Gsn gelsolin ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 3:14,456,106...14,508,922
Ensembl chr 3:14,467,330...14,508,911 		JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:7865494 RGD:11520781 NCBI chr 8:22,035,287...22,047,049
Ensembl chr 8:22,035,256...22,047,059 		JBrowse link
G Il12b interleukin 12B ISO (MGI:4412460|PMID:18025219) RGD PMID:18025219 MGI:4412460 NCBI chr10:30,034,447...30,048,774
Ensembl chr10:30,038,709...30,048,085 		JBrowse link
G Il12rb1 interleukin 12 receptor subunit beta 1 ISO (PMID:12023369) RGD PMID:12023369 NCBI chr16:20,370,722...20,383,576
Ensembl chr16:20,371,338...20,383,337 		JBrowse link
G Il18 interleukin 18 IEP RGD PMID:18547159 RGD:4889457 NCBI chr 8:55,009,666...55,016,286
Ensembl chr 8:54,993,859...55,016,299 		JBrowse link
G Irf8 interferon regulatory factor 8 ISO (PMID:25122610) RGD PMID:25122610 NCBI chr19:54,314,859...54,336,643
Ensembl chr19:54,314,865...54,336,640 		JBrowse link
G Irgm immunity-related GTPase M ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr10:34,213,885...34,221,968
Ensembl chr10:34,213,936...34,221,928 		JBrowse link
G Kif16b kinesin family member 16B ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 3:136,596,621...136,936,809
Ensembl chr 3:136,657,480...136,936,674 		JBrowse link
G Kif5b kinesin family member 5B ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr17:54,181,416...54,219,048
Ensembl chr17:54,181,419...54,212,096 		JBrowse link
G Lgals9 galectin 9 ISO (PMID:23817958) RGD PMID:23817958 NCBI chr10:64,737,022...64,760,195
Ensembl chr10:64,737,022...64,760,201 		JBrowse link
G LOC103690086 uncharacterized LOC103690086 ISO (MGI:4412460|PMID:18025219) RGD PMID:18025219 MGI:4412460 NCBI chr14:5,642,357...5,646,406 JBrowse link
G LOC685067 similar to guanylate binding protein family, member 6 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:248,215,324...248,241,278
Ensembl chr 2:248,219,428...248,239,899 		JBrowse link
G Mrc1 mannose receptor, C type 1 ISO (MGI:5486412|PMID:22832163) RGD PMID:22832163 MGI:5486412 NCBI chr17:81,352,700...81,433,743
Ensembl chr17:81,352,700...81,433,743 		JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:7524476 RGD:10059620 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240 		JBrowse link
G Myo18a myosin XVIIIa ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr10:64,979,770...65,080,535
Ensembl chr10:64,979,770...65,080,535 		JBrowse link
G Myo1c myosin 1C ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr10:63,803,311...63,819,614
Ensembl chr10:63,803,309...63,819,614 		JBrowse link
G Nos2 nitric oxide synthase 2 IEA
ISO		 GO_REF:0000107
(MGI:4412460|PMID:18025219)		 Ensembl
RGD		 PMID:18025219 GO_REF:0000107 MGI:4412460 NCBI chr10:66,188,290...66,221,621
Ensembl chr10:66,189,786...66,313,190 		JBrowse link
G Pde12 phosphodiesterase 12 IEA
ISO		 GO_REF:0000107
(PMID:15231837)		 Ensembl
RGD		 PMID:15231837 GO_REF:0000107 NCBI chr16:2,357,028...2,367,069
Ensembl chr16:2,357,028...2,367,253 		JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 IEP RGD PMID:18466611 RGD:2311658 NCBI chr10:94,850,971...94,913,202 JBrowse link
G Rab11fip5 RAB11 family interacting protein 5 ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 4:117,113,067...117,154,495
Ensembl chr 4:117,115,076...117,153,907 		JBrowse link
G Rab12 RAB12, member RAS oncogene family ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 9:114,683,985...114,709,613
Ensembl chr 9:114,684,039...114,709,546 		JBrowse link
G Rab20 RAB20, member RAS oncogene family ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr16:83,358,116...83,382,326
Ensembl chr16:83,358,116...83,382,326 		JBrowse link
G Rab43 RAB43, member RAS oncogene family ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 4:119,695,012...119,714,490
Ensembl chr 4:119,695,013...119,714,302 		JBrowse link
G Rab7b Rab7b, member RAS oncogene family ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr13:48,456,143...48,483,714
Ensembl chr13:48,455,923...48,482,138 		JBrowse link
G Rpl13a ribosomal protein L13A ISO (PMID:15479637)
(MGI:5466658|PMID:23071094)		 RGD PMID:15479637 PMID:23071094 MGI:5466658 NCBI chr 1:101,120,325...101,123,401
Ensembl chr 1:101,120,325...101,123,402 		JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 ISO (MGI:5913528|PMID:28178239) RGD PMID:28178239 MGI:5913528 NCBI chr10:73,824,200...73,865,503
Ensembl chr10:73,824,202...73,865,364 		JBrowse link
G RT1-Bb RT1 class II, locus Bb IEA
ISO		 GO_REF:0000107
(MGI:4942269|PMID:9244347), (MGI:4942274|PMID:7691725), (MGI:4942276|PMID:2502420), (MGI:4942277|PMID:2493384), (MGI:4943415|PMID:1845803)		 Ensembl
RGD		 PMID:1845803 PMID:2493384 PMID:2502420 PMID:7691725 PMID:9244347 GO_REF:0000107 MGI:4942269 MGI:4942274 MGI:4942276 MGI:4942277 MGI:4943415 NCBI chr20:4,043,726...4,049,367
Ensembl chr20:4,039,413...4,049,711 		JBrowse link
G RT1-Ha RT1 class II, locus Ha ISO (PMID:8568247) RGD PMID:8568247 NCBI chr20:3,875,478...3,885,140
Ensembl chr20:3,875,706...3,881,461 		JBrowse link
G Serpina3n serine (or cysteine) peptidase inhibitor, clade A, member 3N IEP RGD PMID:7619083 RGD:5147424 NCBI chr 6:128,073,344...128,080,878
Ensembl chr 6:127,941,526...128,080,889 		JBrowse link
G Sirpa signal-regulatory protein alpha IMP PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr 3:122,113,735...122,152,478
Ensembl chr 3:122,114,108...122,152,477 		JBrowse link
G Slc26a6 solute carrier family 26 member 6 ISO (PMID:18655181) RGD PMID:18655181 NCBI chr 8:117,648,792...117,659,376
Ensembl chr 8:117,648,745...117,659,804 		JBrowse link
G Star steroidogenic acute regulatory protein IEP RGD PMID:9564825 RGD:4891971 NCBI chr16:71,036,204...71,040,847
Ensembl chr16:71,036,204...71,040,847 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 ISO (PMID:23386060) RGD PMID:23386060 NCBI chr 9:54,287,540...54,327,958
Ensembl chr 9:54,287,541...54,484,533 		JBrowse link
G Stx11 syntaxin 11 ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 1:7,039,160...7,064,870
Ensembl chr 1:7,039,162...7,064,870 		JBrowse link
G Stx4 syntaxin 4 IEA
ISO		 GO_REF:0000107
(MGI:3828867|PMID:19144319)		 Ensembl
RGD		 PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 1:199,287,384...199,295,606
Ensembl chr 1:199,287,710...199,294,979 		JBrowse link
G Stx8 syntaxin 8 ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr10:54,512,922...54,753,302
Ensembl chr10:54,512,983...54,753,302 		JBrowse link
G Stxbp1 syntaxin binding protein 1 ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 3:11,823,779...11,885,479
Ensembl chr 3:11,823,785...11,885,417 		JBrowse link
G Stxbp2 syntaxin binding protein 2 ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr12:2,180,101...2,191,863
Ensembl chr12:2,180,150...2,191,175 		JBrowse link
G Stxbp3 syntaxin binding protein 3 ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 2:211,595,763...211,638,756
Ensembl chr 2:211,595,659...211,638,788 		JBrowse link
G Stxbp4 syntaxin binding protein 4 ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr10:78,005,745...78,168,641
Ensembl chr10:78,009,338...78,168,609 		JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein IEA
ISO		 GO_REF:0000107
(PMID:15479637)		 Ensembl
RGD		 PMID:15479637 GO_REF:0000107 NCBI chr 8:96,100,692...96,266,342
Ensembl chr 8:96,105,025...96,266,342 		JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 ISO (PMID:17720976) RGD PMID:17720976 NCBI chr 8:119,215,266...119,220,909
Ensembl chr 8:119,215,495...119,219,232 		JBrowse link
G Tlr2 toll-like receptor 2 ISO (PMID:11672593) RGD PMID:11672593 NCBI chr 2:182,840,171...182,846,061
Ensembl chr 2:182,840,727...182,846,061 		JBrowse link
G Tlr3 toll-like receptor 3 NOT IEP intestinal epithelial cells
thyrocytes		 RGD PMID:16638093, PMID:15661832 RGD:5128794, RGD:5128798 NCBI chr16:50,016,466...50,031,011
Ensembl chr16:50,016,857...50,031,214 		JBrowse link
G Tlr4 toll-like receptor 4 ISO
IEA		 (PMID:11672593)
GO_REF:0000107		 RGD
Ensembl		 PMID:11672593 GO_REF:0000107 NCBI chr 5:82,587,424...82,601,056
Ensembl chr 5:82,587,420...82,601,052 		JBrowse link
G Tnf tumor necrosis factor IEP RGD PMID:16525716 RGD:14985246 NCBI chr20:5,189,382...5,192,000
Ensembl chr20:5,189,390...5,192,000 		JBrowse link
G Vamp3 vesicle-associated membrane protein 3 ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 5:168,126,157...168,136,628
Ensembl chr 5:168,126,157...168,136,666 		JBrowse link
G Vamp4 vesicle-associated membrane protein 4 ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr13:80,460,699...80,483,597
Ensembl chr13:80,460,694...80,483,600 		JBrowse link
G Vamp8 vesicle-associated membrane protein 8 ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 4:100,250,301...100,252,756
Ensembl chr 4:100,250,301...100,252,755 		JBrowse link
G Vim vimentin IEA
ISO		 GO_REF:0000107
(MGI:3828867|PMID:19144319)		 Ensembl
RGD		 PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr17:80,882,715...80,891,200
Ensembl chr17:80,882,666...80,891,212 		JBrowse link
G Vps26b VPS26 retromer complex component B ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 8:28,054,407...28,075,514
Ensembl chr 8:28,054,407...28,075,514 		JBrowse link
G Was WASP actin nucleation promoting factor ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr  X:15,155,246...15,164,099
Ensembl chr  X:15,155,230...15,164,105 		JBrowse link
G Wnt5a Wnt family member 5A ISO
IEA		 (PMID:18174455)
GO_REF:0000107		 RGD
Ensembl		 PMID:18174455 GO_REF:0000107 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860 		JBrowse link
G Xcl1 X-C motif chemokine ligand 1 IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:83,199,402...83,202,845
Ensembl chr13:83,199,264...83,202,864 		JBrowse link
G Zyx zyxin ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 4:71,740,188...71,749,386
Ensembl chr 4:71,740,532...71,749,386 		JBrowse link
interferon-gamma-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ifng interferon gamma ISO (PMID:22504299), (PMID:23629966)
(MGI:5490676|PMID:23629966)		 RGD PMID:22504299 PMID:23629966 MGI:5490676 NCBI chr 7:61,337,383...61,341,419
Ensembl chr 7:61,337,381...61,341,419 		JBrowse link
G Irf1 interferon regulatory factor 1 IEA
ISO
ISS		 GO_REF:0000107
(MGI:5317515|PMID:21909274)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:21909274 GO_REF:0000024 GO_REF:0000107 MGI:5317515 NCBI chr10:39,109,530...39,116,532
Ensembl chr10:39,109,522...39,116,531 		JBrowse link
G Jak2 Janus kinase 2 IDA PMID:11536325 BHF-UCL PMID:11536325 RGD:8553830 NCBI chr 1:247,398,667...247,457,521
Ensembl chr 1:247,398,598...247,458,509 		JBrowse link
G Nmi N-myc (and STAT) interactor IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:37,458,891...37,480,984
Ensembl chr 3:37,458,890...37,480,984 		JBrowse link
G Stat1 signal transducer and activator of transcription 1 ISO (PMID:21268089), (PMID:26479788)
(MGI:5493216|PMID:12138178)		 RGD PMID:12138178 PMID:21268089 PMID:26479788 MGI:5493216 NCBI chr 9:54,287,540...54,327,958
Ensembl chr 9:54,287,541...54,484,533 		JBrowse link
G Tp53 tumor protein p53 ISO (MGI:5490676|PMID:23629966) RGD PMID:23629966 MGI:5490676 NCBI chr10:56,186,299...56,198,449
Ensembl chr10:56,187,020...56,198,449 		JBrowse link
negative regulation of interferon-gamma-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg1 arginase 1 ISO (PMID:16709924) RGD PMID:16709924 NCBI chr 1:21,525,421...21,537,872
Ensembl chr 1:21,525,421...21,537,863 		JBrowse link
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 ISO (PMID:11679576) RGD PMID:11679576 NCBI chr10:11,059,701...11,085,186
Ensembl chr10:11,060,313...11,085,210 		JBrowse link
G Otop1 otopetrin 1 ISS
ISO		 GO_REF:0000024
(MGI:5750846|PMID:24379350)		 UniProt
RGD		 PMID:24379350 GO_REF:0000024 MGI:5750846 NCBI chr14:77,236,278...77,263,729
Ensembl chr14:77,236,278...77,263,729 		JBrowse link
G Parp14 poly (ADP-ribose) polymerase family, member 14 ISO (PMID:27796300)
(MGI:5905929|PMID:27796300)		 RGD PMID:27796300 MGI:5905929 NCBI chr11:68,105,442...68,137,509
Ensembl chr11:68,105,369...68,137,535 		JBrowse link
G Pparg peroxisome proliferator-activated receptor gamma ISO (PMID:21268089) RGD PMID:21268089 NCBI chr 4:147,274,055...147,399,383
Ensembl chr 4:147,274,107...147,399,380 		JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 ISS
ISO		 GO_REF:0000024
(MGI:5493216|PMID:12138178)		 UniProt
RGD		 PMID:12138178 GO_REF:0000024 MGI:5493216 NCBI chr18:63,415,298...63,489,240
Ensembl chr18:63,415,306...63,488,027 		JBrowse link
positive regulation of interferon-gamma-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpx hemopexin ISO MGI:2447193 (MGI:3807609|PMID:18641331) RGD PMID:18641331 MGI:3807609 NCBI chr 1:170,423,558...170,431,066
Ensembl chr 1:170,423,483...170,431,073 		JBrowse link
G Irgm immunity-related GTPase M ISO (PMID:16888103)
(MGI:3656111|PMID:16888103)		 RGD PMID:16888103 MGI:3656111 NCBI chr10:34,213,885...34,221,968
Ensembl chr10:34,213,936...34,221,928 		JBrowse link
G Med1 mediator complex subunit 1 ISO MGI:2176946|MGI:3511276 (MGI:3798012|PMID:18339625) RGD PMID:18339625 MGI:3798012 NCBI chr10:86,101,560...86,145,271
Ensembl chr10:86,103,600...86,144,880 		JBrowse link
G Nlrc5 NLR family, CARD domain containing 5 ISO (PMID:20061403), (PMID:20639463) RGD PMID:20061403 PMID:20639463 NCBI chr19:10,904,381...11,006,202
Ensembl chr19:10,905,542...10,976,396 		JBrowse link
G Parp9 poly (ADP-ribose) polymerase family, member 9 ISO
IBA		 (PMID:27796300)
PMID:21873635
(MGI:5905929|PMID:27796300)		 RGD PMID:27796300, PMID:21873635 MGI:5905929, RGD:13792537 NCBI chr11:67,724,071...67,758,027
Ensembl chr11:67,724,076...67,756,799 		JBrowse link
G Txk TXK tyrosine kinase ISO (PMID:11859127) RGD PMID:11859127 NCBI chr14:38,029,809...38,085,822
Ensembl chr14:38,030,189...38,085,919 		JBrowse link
positive regulation of response to interferon-gamma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hpx hemopexin ISO MGI:2447193 (MGI:3807609|PMID:18641331) RGD PMID:18641331 MGI:3807609 NCBI chr 1:170,423,558...170,431,066
Ensembl chr 1:170,423,483...170,431,073 		JBrowse link
regulation of interferon-gamma-mediated signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc37 cell division cycle 37, HSP90 cochaperone ISO
IEA		 (PMID:16280321)
GO_REF:0000107		 RGD
Ensembl		 PMID:16280321 GO_REF:0000107 NCBI chr 8:22,160,922...22,173,797
Ensembl chr 8:22,154,067...22,173,804 		JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO (PMID:16280321) RGD PMID:16280321 NCBI chr 9:17,817,791...17,823,163
Ensembl chr 9:17,817,721...17,823,243 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:4,956,795...4,958,472
Ensembl chr10:4,957,326...4,958,461 		JBrowse link
regulation of response to interferon-gamma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Parp9 poly (ADP-ribose) polymerase family, member 9 ISO (PMID:16809771) RGD PMID:16809771 NCBI chr11:67,724,071...67,758,027
Ensembl chr11:67,724,076...67,756,799 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20045
    immune system process 2827
      immune response 1725
        innate immune response 814
          response to interferon-gamma 161
            cellular response to interferon-gamma + 129
            negative regulation of response to interferon-gamma + 6
            positive regulation of response to interferon-gamma + 6
            regulation of response to interferon-gamma + 15
Path 2
Term Annotations click to browse term
  biological_process 20045
    response to stimulus 10557
      response to biotic stimulus 1729
        response to external biotic stimulus 1696
          response to other organism 1692
            defense response to other organism 1100
              innate immune response 814
                response to interferon-gamma 161
                  cellular response to interferon-gamma + 129
                  negative regulation of response to interferon-gamma + 6
                  positive regulation of response to interferon-gamma + 6
                  regulation of response to interferon-gamma + 15
paths to the root