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ONTOLOGY REPORT - ANNOTATIONS


Term:response to biotic stimulus
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Accession:GO:0009607 term browser browse the term
Definition:Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a biotic stimulus, a stimulus caused or produced by a living organism.
Comment:Note that this term is in the subset of terms that should not be used for direct gene product annotation. Instead, select a child term or, if no appropriate child term exists, please request a new term. Direct annotations to this term may be amended during annotation QC.
Synonyms:narrow_synonym: response to biotic stress



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activation of innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aim2 absent in melanoma 2 involved_in IBA
ISO
PMID:21873635
(MGI:3839523|PMID:19158676)
(PMID:19158675), (PMID:19158676), (PMID:19158679)
RGD PMID:19158675 PMID:19158676 PMID:19158679 PMID:21873635 MGI:3839523, RGD:13792537 NCBI chr13:85,865,206...85,906,996
Ensembl chr13:85,866,284...85,906,975
JBrowse link
G Cgas cyclic GMP-AMP synthase involved_in ISO
IBA
(PMID:23258413), (PMID:23929945), (PMID:24077100), (PMID:26046437), (PMID:28363908), (PMID:30007416)
(MGI:5487472|PMID:23258413), (MGI:5505711|PMID:23929945), (MGI:5908326|PMID:24077100)
PMID:21873635
RGD PMID:23258413 PMID:23929945 PMID:24077100 PMID:26046437 PMID:28363908 More... MGI:5487472 MGI:5505711 MGI:5908326, RGD:13792537 NCBI chr 8:79,292,282...79,306,998
Ensembl chr 8:79,294,511...79,305,496
JBrowse link
G Hexim1 HEXIM P-TEFb complex subunit 1 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr10:88,062,808...88,064,920
Ensembl chr10:88,062,803...88,066,189
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (PMID:24971542) RGD PMID:24971542 NCBI chr12:5,973,062...5,978,565 JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 involved_in ISO
ISS
(PMID:20628368)
GO_REF:0000024
RGD
UniProt
PMID:20628368 GO_REF:0000024 NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268
JBrowse link
G LOC102556096 pyrin domain-containing protein 3-like involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr13:85,911,915...85,929,491
Ensembl chr13:85,912,044...85,929,007
JBrowse link
G Matr3 matrin 3 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr18:27,154,098...27,193,212
Ensembl chr18:27,163,714...27,193,166
JBrowse link
G Mavs mitochondrial antiviral signaling protein involved_in ISO
ISS
(PMID:18818105), (PMID:20628368)
GO_REF:0000024
RGD
UniProt
PMID:18818105 PMID:20628368 GO_REF:0000024 NCBI chr 3:118,451,650...118,466,094
Ensembl chr 3:118,451,743...118,466,094
JBrowse link
G Mnda myeloid cell nuclear differentiation antigen involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:86,017,888...86,035,556
Ensembl chr13:86,017,892...86,034,201
JBrowse link
G Nlrc4 NLR family, CARD domain containing 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:3662990|PMID:16648852)
UniProt
RGD
PMID:16648852 GO_REF:0000024 MGI:3662990 NCBI chr 6:20,991,785...21,018,254
Ensembl chr 6:20,995,266...21,018,248
JBrowse link
G Nono non-POU domain containing, octamer-binding involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr  X:66,554,131...66,571,992
Ensembl chr  X:66,554,098...66,571,952
JBrowse link
G Pqbp1 polyglutamine binding protein 1 involved_in ISO
IEA
ISS
(PMID:26046437)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:26046437 GO_REF:0000024 GO_REF:0000107 NCBI chr  X:14,603,516...14,608,091
Ensembl chr  X:14,603,539...14,608,087
JBrowse link
G Prkdc protein kinase, DNA-activated, catalytic subunit involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr11:85,040,790...85,258,357
Ensembl chr11:85,040,792...85,257,952
JBrowse link
G Pspc1 paraspeckle component 1 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr15:30,828,617...30,911,315
Ensembl chr15:30,828,626...30,911,202
JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (PMID:21575908)
(MGI:3839029|PMID:19158675)
RGD PMID:19158675 PMID:21575908 MGI:3839029 NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955
JBrowse link
G Rbm14 RNA binding motif protein 14 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr 1:202,076,940...202,105,688
Ensembl chr 1:202,078,287...202,105,665
JBrowse link
G Sfpq splicing factor proline and glutamine rich involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr 5:139,338,034...139,353,476
Ensembl chr 5:139,338,075...139,353,472
JBrowse link
G Sin3a SIN3 transcription regulator family member A involved_in ISO (PMID:22783022) RGD PMID:22783022 NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192
JBrowse link
G Sting1 stimulator of interferon response cGAMP interactor 1 involved_in ISO
IBA
(PMID:18818105)
(MGI:5487473|PMID:23258412), (MGI:5487515|PMID:21947006)
PMID:21873635
RGD PMID:18818105 PMID:21947006 PMID:23258412 PMID:21873635 MGI:5487473 MGI:5487515, RGD:13792537 NCBI chr18:27,332,119...27,338,371
Ensembl chr18:27,332,119...27,338,335
JBrowse link
G Tbk1 TANK-binding kinase 1 acts_upstream_of_or_within ISO MGI:3046789 (MGI:3530402|PMID:15661922) RGD PMID:15661922 MGI:3530402 NCBI chr 7:57,077,830...57,110,868
Ensembl chr 7:57,077,830...57,110,892
JBrowse link
G Tlr4 toll-like receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1860885 (MGI:3530402|PMID:15661922)
Ensembl
RGD
PMID:15661922 GO_REF:0000107 MGI:3530402 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Tlr9 toll-like receptor 9 involved_in ISO (MGI:5887188|PMID:25686612) RGD PMID:25686612 MGI:5887188 NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796
JBrowse link
G Tomm70 translocase of outer mitochondrial membrane 70 involved_in IEA
ISS
ISO
GO_REF:0000107
GO_REF:0000024
(PMID:20628368)
Ensembl
UniProt
RGD
PMID:20628368 GO_REF:0000024 GO_REF:0000107 NCBI chr11:43,378,719...43,417,166
Ensembl chr11:43,377,216...43,417,202
JBrowse link
G Trim5 tripartite motif-containing 5 involved_in ISO (PMID:21512573) RGD PMID:21512573 NCBI chr 1:158,720,407...158,737,393
Ensembl chr 1:158,720,410...158,814,012
JBrowse link
G Xrcc5 X-ray repair cross complementing 5 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr 9:73,955,220...74,044,020
Ensembl chr 9:73,955,216...74,044,018
JBrowse link
G Xrcc6 X-ray repair cross complementing 6 involved_in ISO (PMID:28712728) RGD PMID:28712728 NCBI chr 7:113,542,992...113,563,762
Ensembl chr 7:113,543,057...113,563,762
JBrowse link
G Zbp1 Z-DNA binding protein 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:6434626|PMID:32296175), (MGI:6436412|PMID:32200799)
UniProt
RGD
PMID:32200799 PMID:32296175 GO_REF:0000024 MGI:6434626 MGI:6436412 NCBI chr 3:161,993,351...162,009,297
Ensembl chr 3:161,993,351...162,003,870
JBrowse link
G Zcchc3 zinc finger CCHC-type containing 3 involved_in ISO (PMID:30135424), (PMID:30193849)
(MGI:6209107|PMID:30135424), (MGI:6271678|PMID:30193849)
RGD PMID:30135424 PMID:30193849 MGI:6209107 MGI:6271678 NCBI chr 3:140,872,460...140,875,851 JBrowse link
antibacterial humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07030143.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr10:68,593,837...68,594,709 JBrowse link
G Adm adrenomedullin involved_in ISO (PMID:10225288) RGD PMID:10225288 NCBI chr 1:164,745,484...164,747,655
Ensembl chr 1:164,745,466...164,747,654
JBrowse link
G Ang angiogenin involved_in ISO (PMID:12548285)
(MGI:2652649|PMID:12548285)
RGD PMID:12548285 MGI:2652649 NCBI chr15:24,317,733...24,323,361 JBrowse link
G Ang2 angiogenin, ribonuclease A family, member 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:24,398,383...24,415,837
Ensembl chr15:24,398,419...24,398,922
JBrowse link
G Anos1 anosmin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:68,561,954...68,562,801
Ensembl chr10:68,561,954...68,562,801
JBrowse link
G App amyloid beta precursor protein involved_in ISO
IDA
(PMID:20209079) RGD PMID:20209079 PMID:20209079 RGD:10400853 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G B2m beta-2 microglobulin involved_in ISO (PMID:23144825) RGD PMID:23144825 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
JBrowse link
G Bpi bactericidal/permeability-increasing protein involved_in ISO (PMID:1937776) RGD PMID:1937776 NCBI chr 3:146,909,626...146,936,487
Ensembl chr 3:146,909,629...146,936,221
JBrowse link
G Bpifa1 BPI fold containing family A, member 1 involved_in ISO
ISS
IBA
(PMID:23499554)
(MGI:5484728|PMID:23499554)
GO_REF:0000024
PMID:21873635
RGD
UniProt
PMID:23499554 PMID:21873635 GO_REF:0000024 MGI:5484728, RGD:13792537 NCBI chr 3:142,627,810...142,633,553
Ensembl chr 3:142,627,810...142,633,552
JBrowse link
G Bpifa5 BPI fold containing family A, member 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:142,646,103...142,652,884
Ensembl chr 3:142,646,103...142,652,883
JBrowse link
G Camp cathelicidin antimicrobial peptide involved_in ISO (PMID:12759353), (PMID:14978112), (PMID:20209079)
(PMID:12860195)
(PMID:7529412)
RGD PMID:7529412 PMID:12759353 PMID:12860195 PMID:14978112 PMID:20209079 NCBI chr 8:109,841,729...109,843,543
Ensembl chr 8:109,841,729...109,843,543
JBrowse link
G Ctsg cathepsin G involved_in IEA
ISO
GO_REF:0000107
(PMID:1937776)
Ensembl
RGD
PMID:1937776 GO_REF:0000107 NCBI chr15:29,930,988...29,937,353
Ensembl chr15:29,931,003...29,937,353
JBrowse link
G Defa10 defensin alpha 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,514,248...70,515,024
Ensembl chr16:70,514,248...70,515,024
JBrowse link
G Defa11 defensin alpha 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,533,436...70,535,646
Ensembl chr16:70,533,436...70,535,604
JBrowse link
G Defa24 defensin alpha 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,349,550...70,350,582
Ensembl chr16:70,349,567...70,350,603
JBrowse link
G Defa5 defensin alpha 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,342,530...70,344,836
Ensembl chr16:70,342,530...70,344,836
JBrowse link
G Defa6 defensin alpha 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,405,268...70,406,142
Ensembl chr16:70,405,268...70,406,142
JBrowse link
G Defa8 defensin alpha 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,433,166...70,434,059
Ensembl chr16:70,433,166...70,434,059
JBrowse link
G Defa9 defensin alpha 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,481,813...70,482,803
Ensembl chr16:70,481,821...70,482,717
JBrowse link
G Defal1 defensin alpha-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,371,518...70,372,353
Ensembl chr16:70,371,518...70,372,353
JBrowse link
G Defb1 defensin beta 1 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr16:70,298,862...70,313,604
Ensembl chr16:70,298,863...70,313,604
JBrowse link
G Fau FAU, ubiquitin like and ribosomal protein S30 fusion involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr 1:203,350,226...203,351,741
Ensembl chr 1:203,350,189...203,351,742
JBrowse link
G H2bc12 H2B clustered histone 12 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:42,485,746...42,486,126 JBrowse link
G Hist1h2bd histone cluster 1 H2B family member D involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:42,792,887...42,793,268 JBrowse link
G Hist1h2bl histone cluster 1 H2B family member l involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:42,708,646...42,709,435 JBrowse link
G Hist1h2bq histone cluster 1 H2B family member Q involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:41,432,100...41,441,487
Ensembl chr17:41,429,164...41,442,153
JBrowse link
G Hist2h2be histone cluster 2 H2B family member E involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr 2:183,780,449...183,783,030 JBrowse link
G Ighg1 immunoglobulin heavy constant gamma 1 acts_upstream_of_or_within ISO (MGI:2664488|PMID:11911824), (MGI:3690573|PMID:9834074) RGD PMID:9834074 PMID:11911824 MGI:2664488 MGI:3690573 Ensembl chr 6:132,389,370...132,393,397 JBrowse link
G Ighm immunoglobulin heavy constant mu involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Inhca inhibitor of carbonic anhydrase involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:103,836,846...103,874,980
Ensembl chr 8:103,823,196...103,874,985
JBrowse link
G Jchain joining chain of multimeric IgA and IgM involved_in ISO (PMID:23250751) RGD PMID:23250751 NCBI chr14:19,538,560...19,546,384
Ensembl chr14:19,538,952...19,546,298
JBrowse link
G LOC103690289 antileukoproteinase-like involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Ltf lactotransferrin involved_in IBA
ISO
PMID:21873635
(PMID:1599934), (PMID:18714013)
RGD PMID:1599934 PMID:18714013 PMID:21873635 RGD:13792537 NCBI chr 8:110,999,948...111,022,795
Ensembl chr 8:110,999,948...111,022,795
JBrowse link
G Np4 defensin NP-4 precursor involved_in ISO
IBA
(PMID:2500436)
PMID:21873635
RGD PMID:2500436 PMID:21873635 RGD:13792537 NCBI chr16:70,494,607...70,497,261
Ensembl chr16:70,342,529...70,497,202
JBrowse link
G Npy neuropeptide Y involved_in ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 4:78,881,294...78,888,495
Ensembl chr 4:78,881,264...78,888,495
JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr12:41,142,193...41,151,967
Ensembl chr12:41,142,200...41,153,226
JBrowse link
G Pla2g6 phospholipase A2 group VI involved_in ISO (PMID:18714013) RGD PMID:18714013 NCBI chr 7:110,851,378...110,891,557
Ensembl chr 7:110,851,378...110,891,114
JBrowse link
G RatNP-3b defensin RatNP-3 precursor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,544,364...70,546,533
Ensembl chr16:70,513,888...70,546,522
JBrowse link
G RGD1563818 similar to secretory leukocyte protease inhibitor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G Rnase3 ribonuclease A family member 3 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr15:24,511,894...24,512,764
Ensembl chr15:24,511,891...24,512,790
JBrowse link
G Rnase6 ribonuclease A family member k6 involved_in IBA
ISO
PMID:21873635
(MGI:5902674|PMID:25075772)
(PMID:25075772)
RGD PMID:25075772 PMID:21873635 MGI:5902674, RGD:13792537 NCBI chr15:24,354,305...24,357,289
Ensembl chr15:24,354,303...24,357,328
JBrowse link
G Rpl39 ribosomal protein L39 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr  X:116,327,183...116,330,211 JBrowse link
G RT1-S3 RT1 class Ib, locus S3 involved_in ISO (PMID:25631937) RGD PMID:25631937 NCBI chr20:2,670,654...2,675,411
Ensembl chr20:2,670,709...2,675,411
JBrowse link
G Semg1 semenogelin 1 involved_in ISO (PMID:18714013) RGD PMID:18714013 NCBI chr 3:152,910,033...152,912,882
Ensembl chr 3:152,910,034...152,912,882
JBrowse link
G Slpi secretory leukocyte peptidase inhibitor involved_in IBA
ISO
PMID:21873635
(MGI:3777210|PMID:18322212)
(PMID:18714013)
RGD PMID:18322212 PMID:18714013 PMID:21873635 MGI:3777210, RGD:13792537 NCBI chr 3:153,082,208...153,084,457
Ensembl chr 3:153,082,369...153,084,453
JBrowse link
G Slpil2 antileukoproteinase-like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,019,901...153,021,351
Ensembl chr 3:153,019,109...153,021,360
Ensembl chr 3:153,019,109...153,021,360
JBrowse link
G Slpil3 antileukoproteinase-like 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,056,907...153,061,611
Ensembl chr 3:153,010,336...153,012,598
JBrowse link
G Tac1 tachykinin, precursor 1 involved_in ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 4:35,679,183...35,687,180
Ensembl chr 4:35,679,704...35,687,178
JBrowse link
G Tf transferrin involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:103,789,780...103,816,487
Ensembl chr 8:103,767,995...103,816,511
JBrowse link
G Vip vasoactive intestinal peptide involved_in ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 1:42,064,878...42,073,219
Ensembl chr 1:42,065,120...42,073,216
JBrowse link
G Wap whey acidic protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:81,503,125...81,505,217
Ensembl chr14:81,503,123...81,505,219
JBrowse link
G Wfdc10a WAP four-disulfide core domain 10A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,390,067...153,391,420
Ensembl chr 3:153,390,067...153,391,420
JBrowse link
G Wfdc11 WAP four-disulfide core domain 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,397,711...153,399,978 JBrowse link
G Wfdc12 WAP four-disulfide core domain 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:152,862,341...152,862,690
Ensembl chr 3:152,862,341...152,862,690
JBrowse link
G Wfdc13 WAP four-disulfide core domain 13 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,419,553...153,421,306
Ensembl chr 3:153,419,648...153,421,221
JBrowse link
G Wfdc15a WAP four-disulfide core domain 15A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:152,874,144...152,874,522
Ensembl chr 3:152,873,285...152,874,620
JBrowse link
G Wfdc15b WAP four-disulfide core domain 15B involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:152,889,298...152,900,571
Ensembl chr 3:152,890,216...152,896,900
JBrowse link
G Wfdc16 WAP four-disulfide core domain 16 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,366,976...153,370,056
Ensembl chr 3:153,366,976...153,370,056
JBrowse link
G Wfdc18 WAP four-disulfide core domain 18 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:68,588,818...68,590,972
Ensembl chr10:68,588,818...68,589,671
JBrowse link
G Wfdc2 WAP four-disulfide core domain 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,286,946...153,314,832
Ensembl chr 3:153,286,131...153,292,807
JBrowse link
G Wfdc21 WAP four-disulfide core domain 21 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:68,627,836...68,633,705
Ensembl chr10:68,627,820...68,633,701
JBrowse link
G Wfdc3 WAP four-disulfide core domain 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,464,862...153,478,952
Ensembl chr 3:153,464,862...153,478,952
JBrowse link
G Wfdc5 WAP four-disulfide core domain 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:152,849,025...152,854,868
Ensembl chr 3:152,849,025...152,854,904
JBrowse link
G Wfdc9 WAP four-disulfide core domain 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,380,562...153,383,734
Ensembl chr 3:153,380,649...153,391,261
JBrowse link
antibacterial peptide biosynthetic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp7 matrix metallopeptidase 7 acts_upstream_of_or_within ISO (MGI:4838964|PMID:20056603) RGD PMID:20056603 MGI:4838964 NCBI chr 8:4,848,186...4,855,908
Ensembl chr 8:4,848,186...4,855,902
JBrowse link
antibacterial peptide secretion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mmp7 matrix metallopeptidase 7 acts_upstream_of_or_within ISO (MGI:3698376|PMID:11248802) RGD PMID:11248802 MGI:3698376 NCBI chr 8:4,848,186...4,855,908
Ensembl chr 8:4,848,186...4,855,902
JBrowse link
antifungal humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin NOT|involved_in ISO (PMID:10225288) RGD PMID:10225288 NCBI chr 1:164,745,484...164,747,655
Ensembl chr 1:164,745,466...164,747,654
JBrowse link
G Ang angiogenin involved_in ISO (PMID:12548285)
(MGI:2652649|PMID:12548285)
RGD PMID:12548285 MGI:2652649 NCBI chr15:24,317,733...24,323,361 JBrowse link
G App amyloid beta precursor protein involved_in ISO
IDA
(PMID:20209079) RGD PMID:20209079 PMID:20209079 RGD:10400853 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G Camp cathelicidin antimicrobial peptide involved_in ISO (PMID:14978112), (PMID:20209079) RGD PMID:14978112 PMID:20209079 NCBI chr 8:109,841,729...109,843,543
Ensembl chr 8:109,841,729...109,843,543
JBrowse link
G Fam3a FAM3 metabolism regulating signaling molecule A involved_in ISO (PMID:18212107) RGD PMID:18212107 NCBI chr  X:152,166,716...152,175,327
Ensembl chr  X:152,165,535...152,175,362
JBrowse link
G Il36rn interleukin 36 receptor antagonist involved_in ISO (PMID:23147407) RGD PMID:23147407 NCBI chr 3:7,044,419...7,051,016
Ensembl chr 3:7,044,406...7,051,016
JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:11083624) RGD PMID:11083624 NCBI chr 8:110,999,948...111,022,795
Ensembl chr 8:110,999,948...111,022,795
JBrowse link
G Np4 defensin NP-4 precursor involved_in ISO (PMID:2500436) RGD PMID:2500436 NCBI chr16:70,494,607...70,497,261
Ensembl chr16:70,342,529...70,497,202
JBrowse link
G Npy neuropeptide Y involved_in ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 4:78,881,294...78,888,495
Ensembl chr 4:78,881,264...78,888,495
JBrowse link
G Rarres2 retinoic acid receptor responder 2 involved_in ISO (PMID:23527010) RGD PMID:23527010 NCBI chr 4:77,522,549...77,525,733
Ensembl chr 4:77,522,535...77,525,556
JBrowse link
G Tac1 tachykinin, precursor 1 involved_in ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 4:35,679,183...35,687,180
Ensembl chr 4:35,679,704...35,687,178
JBrowse link
G Vip vasoactive intestinal peptide involved_in ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 1:42,064,878...42,073,219
Ensembl chr 1:42,065,120...42,073,216
JBrowse link
antifungal innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl10 BCL10, immune signaling adaptor involved_in ISS
ISO
GO_REF:0000024
(MGI:5310700|PMID:22265677)
UniProt
RGD
PMID:22265677 GO_REF:0000024 MGI:5310700 NCBI chr 2:234,840,880...234,850,520
Ensembl chr 2:234,840,858...234,850,523
JBrowse link
G Card9 caspase recruitment domain family, member 9 involved_in ISS
ISO
GO_REF:0000024
(MGI:5310700|PMID:22265677), (MGI:5567862|PMID:24470469), (MGI:5919121|PMID:26679537), (MGI:5919639|PMID:25621893), (MGI:6117948|PMID:29080677), (MGI:6445005|PMID:32358020), (MGI:6508474|PMID:33548172)
(PMID:24231284), (PMID:25057046), (PMID:25702837), (PMID:26488816), (PMID:26679537), (PMID:26961233), (PMID:29080677), (PMID:33548172), (PMID:33558980)
UniProt
RGD
PMID:22265677 PMID:24231284 PMID:24470469 PMID:25057046 PMID:25621893 More... GO_REF:0000024 MGI:5310700 MGI:5567862 MGI:5919121 MGI:5919639 MGI:6117948 MGI:6445005 MGI:6508474 NCBI chr 3:9,171,814...9,180,310
Ensembl chr 3:9,171,815...9,180,237
JBrowse link
G Clec4a C-type lectin domain family 4, member A involved_in ISO (MGI:5300086|PMID:22041900), (MGI:6445005|PMID:32358020) RGD PMID:22041900 PMID:32358020 MGI:5300086 MGI:6445005 NCBI chr 4:156,340,439...156,434,212
Ensembl chr 4:156,414,688...156,432,402
JBrowse link
G Clec4d C-type lectin domain family 4, member D involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5562511|PMID:23911656)
(PMID:23911656)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:23911656 GO_REF:0000024 GO_REF:0000107 MGI:5562511 NCBI chr 4:156,589,591...156,598,969
Ensembl chr 4:156,589,792...156,598,848
JBrowse link
G Clec4e C-type lectin domain family 4, member E involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:3796003|PMID:18490740)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:18490740 GO_REF:0000024 GO_REF:0000107 MGI:3796003 NCBI chr 4:156,606,927...156,612,911
Ensembl chr 4:156,607,614...156,612,767
JBrowse link
G Clec4n C-type lectin domain family 4, member n involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 Ensembl chr 4:156,539,408...156,558,605 JBrowse link
G Clec7a C-type lectin domain containing 7A involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 4:162,902,731...162,913,931
Ensembl chr 4:162,902,732...162,913,897
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:6110065|PMID:29326275)
(PMID:29326275)
UniProt
RGD
PMID:29326275 GO_REF:0000024 MGI:6110065 NCBI chr 8:119,785,726...119,799,431
Ensembl chr 8:119,782,595...119,800,014
JBrowse link
G Defb15 defensin beta 15 involved_in ISO (PMID:24189797) RGD PMID:24189797 NCBI chr16:70,141,193...70,143,834
Ensembl chr16:70,141,193...70,143,834
JBrowse link
G Defb24 defensin beta 24 involved_in ISO
IBA
(PMID:24449502)
PMID:21873635
RGD PMID:24449502 PMID:21873635 RGD:13792537 NCBI chr 3:141,046,571...141,052,706
Ensembl chr 3:141,046,564...141,052,753
JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:5300086|PMID:22041900)
Ensembl
RGD
PMID:22041900 GO_REF:0000107 MGI:5300086 NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930
JBrowse link
G Rarres2 retinoic acid receptor responder 2 involved_in ISO (PMID:23527010) RGD PMID:23527010 NCBI chr 4:77,522,549...77,525,733
Ensembl chr 4:77,522,535...77,525,556
JBrowse link
antimicrobial humoral immune response mediated by antimicrobial peptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07012269.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537
G AC115202.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 4:110,867,647...110,870,072 JBrowse link
G Adm adrenomedullin involved_in ISO (PMID:10225288) RGD PMID:10225288 NCBI chr 1:164,745,484...164,747,655
Ensembl chr 1:164,745,466...164,747,654
JBrowse link
G Ang angiogenin involved_in ISO (PMID:12548285)
(MGI:2652649|PMID:12548285)
RGD PMID:12548285 MGI:2652649 NCBI chr15:24,317,733...24,323,361 JBrowse link
G Ang2 angiogenin, ribonuclease A family, member 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr15:24,398,383...24,415,837
Ensembl chr15:24,398,419...24,398,922
JBrowse link
G App amyloid beta precursor protein involved_in ISO
IDA
(PMID:20209079) RGD PMID:20209079 PMID:20209079 RGD:10400853 NCBI chr11:24,019,774...24,236,584
Ensembl chr11:24,019,778...24,236,561
JBrowse link
G B2m beta-2 microglobulin involved_in ISO (PMID:23144825) RGD PMID:23144825 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
JBrowse link
G Bpi bactericidal/permeability-increasing protein involved_in ISO (PMID:1937776) RGD PMID:1937776 NCBI chr 3:146,909,626...146,936,487
Ensembl chr 3:146,909,629...146,936,221
JBrowse link
G Bpifa1 BPI fold containing family A, member 1 involved_in IBA
ISO
PMID:21873635
(PMID:21805676)
RGD PMID:21805676 PMID:21873635 RGD:13792537 NCBI chr 3:142,627,810...142,633,553
Ensembl chr 3:142,627,810...142,633,552
JBrowse link
G Bpifa5 BPI fold containing family A, member 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:142,646,103...142,652,884
Ensembl chr 3:142,646,103...142,652,883
JBrowse link
G Camp cathelicidin antimicrobial peptide involved_in ISO
IBA
(PMID:12860195)
PMID:21873635
(MGI:3770082|PMID:17012259)
(PMID:12759353), (PMID:14978112), (PMID:17012259), (PMID:20209079), (PMID:20421939), (PMID:23537644), (PMID:9182550)
(PMID:7529412)
RGD PMID:7529412 PMID:9182550 PMID:12759353 PMID:12860195 PMID:14978112 More... MGI:3770082, RGD:13792537 NCBI chr 8:109,841,729...109,843,543
Ensembl chr 8:109,841,729...109,843,543
JBrowse link
G Ccl1 C-C motif chemokine ligand 1 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr10:67,128,331...67,131,109
Ensembl chr10:67,128,331...67,131,159
JBrowse link
G Ccl11 C-C motif chemokine ligand 11 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr10:67,028,328...67,032,929
Ensembl chr10:67,028,328...67,032,926
JBrowse link
G Ccl12 chemokine (C-C motif) ligand 12 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr10:67,070,230...67,071,780
Ensembl chr10:67,070,230...67,071,780
JBrowse link
G Ccl17 C-C motif chemokine ligand 17 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr19:10,202,317...10,203,768
Ensembl chr19:10,202,128...10,203,819
JBrowse link
G Ccl19 C-C motif chemokine ligand 19 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr 5:56,963,364...56,965,308
Ensembl chr 5:56,963,364...56,965,308
JBrowse link
G Ccl20 C-C motif chemokine ligand 20 involved_in ISO (PMID:12949249), (PMID:19109182) RGD PMID:12949249 PMID:19109182 NCBI chr 9:84,389,031...84,391,629
Ensembl chr 9:84,388,904...84,391,629
JBrowse link
G Ccl21 C-C motif chemokine ligand 21 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr 5:56,980,557...56,981,661
Ensembl chr 5:56,980,558...56,981,686
JBrowse link
G Ccl22 C-C motif chemokine ligand 22 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr19:10,257,602...10,264,373
Ensembl chr19:10,257,601...10,264,400
JBrowse link
G Ccl25 C-C motif chemokine ligand 25 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr12:2,707,398...2,716,571
Ensembl chr12:2,707,398...2,716,554
JBrowse link
G Ccl27 C-C motif chemokine ligand 27 involved_in ISO (PMID:19109182) RGD PMID:19109182 NCBI chr 5:56,941,402...56,948,511
Ensembl chr 5:56,941,402...56,948,506
JBrowse link
G Ccl28 C-C motif chemokine ligand 28 involved_in ISO (PMID:12538707)
(MGI:5897759|PMID:12538707)
RGD PMID:12538707 MGI:5897759 NCBI chr 2:51,601,354...51,625,999
Ensembl chr 2:51,601,331...51,625,997
JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 involved_in IBA
ISO
PMID:21873635
(PMID:12949249)
RGD PMID:12949249 PMID:21873635 RGD:13792537 NCBI chr14:17,193,364...17,195,143
Ensembl chr14:17,193,365...17,195,215
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 involved_in IBA
ISO
PMID:21873635
(PMID:12949249)
RGD PMID:12949249 PMID:21873635 RGD:13792537 NCBI chr14:15,704,772...15,706,969
Ensembl chr14:15,704,758...15,706,975
JBrowse link
G Cxcl11 C-X-C motif chemokine ligand 11 involved_in ISO
IBA
(PMID:12949249)
PMID:21873635
RGD PMID:12949249 PMID:21873635 RGD:13792537 NCBI chr14:15,689,432...15,692,207
Ensembl chr14:15,689,424...15,692,271
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
JBrowse link
G Cxcl13 C-X-C motif chemokine ligand 13 involved_in IBA
ISO
PMID:21873635
(PMID:12949249)
RGD PMID:12949249 PMID:21873635 RGD:13792537 NCBI chr14:13,608,894...13,613,965
Ensembl chr14:13,608,902...13,613,933
JBrowse link
G Cxcl14 C-X-C motif chemokine ligand 14 involved_in ISO
IBA
(PMID:12949249), (PMID:19109182)
(MGI:3822386|PMID:19109182)
PMID:21873635
RGD PMID:12949249 PMID:19109182 PMID:21873635 MGI:3822386, RGD:13792537 NCBI chr17:8,317,933...8,325,956
Ensembl chr17:8,317,933...8,324,839
JBrowse link
G Cxcl2 C-X-C motif chemokine ligand 2 involved_in ISO
IBA
(PMID:12949249)
PMID:21873635
RGD PMID:12949249 PMID:21873635 RGD:13792537 NCBI chr14:17,181,030...17,183,075
Ensembl chr14:17,181,062...17,183,075
JBrowse link
G Cxcl3 C-X-C motif chemokine ligand 3 involved_in IBA
ISO
PMID:21873635
(PMID:12949249)
RGD PMID:12949249 PMID:21873635 RGD:13792537 NCBI chr14:17,270,146...17,289,458
Ensembl chr14:17,270,146...17,289,511
JBrowse link
G Cxcl6 C-X-C motif chemokine ligand 6 involved_in IBA
IEA
ISO
PMID:21873635
GO_REF:0000107
(PMID:8399143)
Ensembl
RGD
PMID:8399143 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr14:17,310,089...17,312,303
Ensembl chr14:17,310,426...17,313,093
JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 involved_in ISO
IBA
(PMID:12949249)
PMID:21873635
RGD PMID:12949249 PMID:21873635 RGD:13792537 NCBI chr14:15,722,868...15,727,779
Ensembl chr14:15,722,908...15,728,435
JBrowse link
G Defa10 defensin alpha 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,514,248...70,515,024
Ensembl chr16:70,514,248...70,515,024
JBrowse link
G Defa11 defensin alpha 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,533,436...70,535,646
Ensembl chr16:70,533,436...70,535,604
JBrowse link
G Defa24 defensin alpha 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,349,550...70,350,582
Ensembl chr16:70,349,567...70,350,603
JBrowse link
G Defa5 defensin alpha 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,342,530...70,344,836
Ensembl chr16:70,342,530...70,344,836
JBrowse link
G Defa6 defensin alpha 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,405,268...70,406,142
Ensembl chr16:70,405,268...70,406,142
JBrowse link
G Defa8 defensin alpha 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,433,166...70,434,059
Ensembl chr16:70,433,166...70,434,059
JBrowse link
G Defa9 defensin alpha 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,481,813...70,482,803
Ensembl chr16:70,481,821...70,482,717
JBrowse link
G Defal1 defensin alpha-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,371,518...70,372,353
Ensembl chr16:70,371,518...70,372,353
JBrowse link
G Defb1 defensin beta 1 involved_in ISO (PMID:12860195), (PMID:25122636) RGD PMID:12860195 PMID:25122636 NCBI chr16:70,298,862...70,313,604
Ensembl chr16:70,298,863...70,313,604
JBrowse link
G Defb14 defensin beta 14 involved_in ISO (PMID:11085990) RGD PMID:11085990 NCBI chr16:70,663,443...70,668,473
Ensembl chr16:70,663,333...70,666,540
JBrowse link
G Defb21 defensin beta 21 involved_in ISO (PMID:15033915) RGD PMID:15033915 NCBI chr 3:141,042,844...141,044,159
Ensembl chr 3:141,042,810...141,044,184
JBrowse link
G Defb22 defensin beta 22 involved_in ISO (PMID:19373462) RGD PMID:19373462 NCBI chr 3:140,957,093...140,961,373
Ensembl chr 3:140,957,090...140,961,373
JBrowse link
G Defb4 defensin beta 4 involved_in ISO (PMID:19109182)
(PMID:9727055)
RGD PMID:9727055 PMID:19109182 NCBI chr16:70,650,472...70,653,665
Ensembl chr16:70,650,472...70,653,665
JBrowse link
G Defb41 defensin beta 41 involved_in ISO (PMID:28181499) RGD PMID:28181499 NCBI chr15:37,255,022...37,257,543
Ensembl chr15:37,255,022...37,257,543
JBrowse link
G Defb43 defensin beta 43 involved_in ISO (PMID:26649771) RGD PMID:26649771 NCBI chr15:37,272,008...37,276,626
Ensembl chr15:37,272,008...37,276,626
JBrowse link
G Defb5 defensin beta 5 involved_in ISO (PMID:19109182)
(PMID:9727055)
RGD PMID:9727055 PMID:19109182 NCBI chr16:70,613,200...70,615,360
Ensembl chr16:70,613,146...70,615,467
JBrowse link
G Dmbt1 deleted in malignant brain tumors 1 involved_in ISO (PMID:11007786), (PMID:19189310) RGD PMID:11007786 PMID:19189310 NCBI chr 1:185,617,469...185,696,476 JBrowse link
G F2 coagulation factor II involved_in IEA
ISO
GO_REF:0000107
(PMID:20421939)
Ensembl
RGD
PMID:20421939 GO_REF:0000107 NCBI chr 3:77,596,196...77,609,486
Ensembl chr 3:77,596,198...77,609,486
JBrowse link
G Fam3a FAM3 metabolism regulating signaling molecule A involved_in ISO (PMID:18212107) RGD PMID:18212107 NCBI chr  X:152,166,716...152,175,327
Ensembl chr  X:152,165,535...152,175,362
JBrowse link
G Fau FAU, ubiquitin like and ribosomal protein S30 fusion involved_in ISO (PMID:12860195)
(MGI:5897760|PMID:10496312)
RGD PMID:10496312 PMID:12860195 MGI:5897760 NCBI chr 1:203,350,226...203,351,741
Ensembl chr 1:203,350,189...203,351,742
JBrowse link
G Galp galanin-like peptide involved_in ISO
IBA
(PMID:23537644)
PMID:21873635
RGD PMID:23537644 PMID:21873635 RGD:13792537 NCBI chr 1:67,684,023...67,703,121
Ensembl chr 1:67,684,025...67,702,269
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:22832495) RGD PMID:22832495 NCBI chr 4:157,962,312...157,967,158
Ensembl chr 4:157,962,343...157,966,235
JBrowse link
G H2bc12 H2B clustered histone 12 involved_in ISO (PMID:12860195), (PMID:15019208) RGD PMID:12860195 PMID:15019208 NCBI chr17:42,485,746...42,486,126 JBrowse link
G Hamp hepcidin antimicrobial peptide involved_in ISO (PMID:11113131)
(PMID:11034317), (PMID:11113131)
RGD PMID:11034317 PMID:11113131 NCBI chr 1:86,170,926...86,172,865
Ensembl chr 1:86,170,901...86,172,891
JBrowse link
G Hist1h2bd histone cluster 1 H2B family member D involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:42,792,887...42,793,268 JBrowse link
G Hist1h2bl histone cluster 1 H2B family member l involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:42,708,646...42,709,435 JBrowse link
G Hist1h2bq histone cluster 1 H2B family member Q involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr17:41,432,100...41,441,487
Ensembl chr17:41,429,164...41,442,153
JBrowse link
G Hist2h2be histone cluster 2 H2B family member E involved_in ISO (PMID:11859126), (PMID:12860195) RGD PMID:11859126 PMID:12860195 NCBI chr 2:183,780,449...183,783,030 JBrowse link
G Hmgn2 high mobility group nucleosomal binding domain 2 involved_in ISO (PMID:16204630) RGD PMID:16204630 NCBI chr 5:146,192,126...146,195,580
Ensembl chr 5:146,192,126...146,195,521
JBrowse link
G Hrg histidine-rich glycoprotein involved_in IEA
ISO
GO_REF:0000107
(MGI:5294287|PMID:18797515)
(PMID:18797515)
Ensembl
RGD
PMID:18797515 GO_REF:0000107 MGI:5294287 NCBI chr11:78,054,488...78,069,402
Ensembl chr11:78,054,498...78,069,389
JBrowse link
G Kb15 type II keratin Kb15 involved_in ISO (MGI:5466437|PMID:23006328) RGD PMID:23006328 MGI:5466437 NCBI chr 7:132,677,994...132,686,634
Ensembl chr 7:132,677,751...132,686,759
JBrowse link
G Kng2 kininogen 2 involved_in ISO (PMID:12074933) RGD PMID:12074933 NCBI chr11:77,913,876...77,936,247 JBrowse link
G Krt6a keratin 6A involved_in ISO (PMID:23006328) RGD PMID:23006328 NCBI chr 7:132,829,278...132,833,665 JBrowse link
G Lgals3 galectin 3 involved_in ISO (PMID:16982911) RGD PMID:16982911 NCBI chr15:20,620,083...20,632,019
Ensembl chr15:20,607,692...20,632,025
JBrowse link
G LOC681544 similar to histidine-rich glycoprotein involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr11:78,039,371...78,049,353
Ensembl chr11:78,039,376...78,049,353
JBrowse link
G Ltf lactotransferrin involved_in ISO (PMID:15155221) RGD PMID:15155221 NCBI chr 8:110,999,948...111,022,795
Ensembl chr 8:110,999,948...111,022,795
JBrowse link
G Np4 defensin NP-4 precursor involved_in IBA
ISO
PMID:21873635
(PMID:2500436)
RGD PMID:2500436 PMID:21873635 RGD:13792537 NCBI chr16:70,494,607...70,497,261
Ensembl chr16:70,342,529...70,497,202
JBrowse link
G Nppb natriuretic peptide B involved_in ISO (PMID:11410403) RGD PMID:11410403 NCBI chr 5:158,416,813...158,418,175
Ensembl chr 5:158,416,866...158,418,168
JBrowse link
G Npy neuropeptide Y involved_in ISO (PMID:18603306)
(PMID:9756788)
RGD PMID:9756788 PMID:18603306 NCBI chr 4:78,881,294...78,888,495
Ensembl chr 4:78,881,264...78,888,495
JBrowse link
G Nts neurotensin involved_in ISO (PMID:12074933) RGD PMID:12074933 NCBI chr 7:37,564,944...37,574,350
Ensembl chr 7:37,564,533...37,574,423
JBrowse link
G Pf4 platelet factor 4 involved_in ISO
IBA
(PMID:23245326)
(MGI:5897546|PMID:23245326)
PMID:21873635
(PMID:10877842)
RGD PMID:10877842 PMID:23245326 PMID:21873635 MGI:5897546, RGD:13792537 NCBI chr14:17,298,438...17,299,148
Ensembl chr14:17,298,308...17,299,365
JBrowse link
G Pglyrp1 peptidoglycan recognition protein 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:16354652)
Ensembl
RGD
PMID:16354652 GO_REF:0000107 NCBI chr 1:78,531,815...78,537,001
Ensembl chr 1:78,531,815...78,537,001
JBrowse link
G Pglyrp3 peptidoglycan recognition protein 3 involved_in ISO (PMID:16354652) RGD PMID:16354652 NCBI chr 2:177,479,693...177,490,867
Ensembl chr 2:176,855,732...176,874,162
Ensembl chr 2:176,855,732...176,874,162
JBrowse link
G Pglyrp4 peptidoglycan recognition protein 4 involved_in ISO (PMID:16354652) RGD PMID:16354652 NCBI chr 2:176,202,654...176,322,859
Ensembl chr 2:176,218,519...176,242,251
JBrowse link
G Pla2g1b phospholipase A2 group IB involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr12:41,142,193...41,151,967
Ensembl chr12:41,142,200...41,153,226
JBrowse link
G Pomc proopiomelanocortin involved_in ISO (PMID:10670585) RGD PMID:10670585 NCBI chr 6:26,939,844...26,945,666
Ensembl chr 6:26,939,837...26,945,664
JBrowse link
G Ppbp pro-platelet basic protein involved_in ISO
IBA
(PMID:10877842)
PMID:21873635
RGD PMID:10877842 PMID:21873635 RGD:13792537 NCBI chr14:17,302,326...17,303,130
Ensembl chr14:17,302,326...17,303,130
JBrowse link
G RatNP-3b defensin RatNP-3 precursor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,544,364...70,546,533
Ensembl chr16:70,513,888...70,546,522
JBrowse link
G Reg1a regenerating family member 1 alpha involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:110,892,451...110,895,115
Ensembl chr 4:110,892,453...110,895,570
JBrowse link
G Reg3a regenerating islet-derived 3 alpha involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:110,872,398...110,875,157
Ensembl chr 4:110,872,425...110,875,157
JBrowse link
G Reg3b regenerating family member 3 beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:110,861,775...110,865,015
Ensembl chr 4:110,861,775...110,865,015
JBrowse link
G Reg3g regenerating family member 3 gamma involved_in IBA
ISO
PMID:21873635
(MGI:5897756|PMID:16931762)
(PMID:16931762)
RGD PMID:16931762 PMID:21873635 MGI:5897756, RGD:13792537 NCBI chr 4:110,922,805...110,927,803
Ensembl chr 4:110,924,168...110,926,723
JBrowse link
G Rnase3 ribonuclease A family member 3 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr15:24,511,894...24,512,764
Ensembl chr15:24,511,891...24,512,790
JBrowse link
G Rnase6 ribonuclease A family member k6 involved_in IBA
ISO
PMID:21873635
(MGI:5902674|PMID:25075772)
(PMID:25075772)
RGD PMID:25075772 PMID:21873635 MGI:5902674, RGD:13792537 NCBI chr15:24,354,305...24,357,289
Ensembl chr15:24,354,303...24,357,328
JBrowse link
G Romo1 reactive oxygen species modulator 1 involved_in ISO (PMID:22083756) RGD PMID:22083756 NCBI chr 3:144,659,709...144,661,310
Ensembl chr 3:144,659,826...144,661,310
JBrowse link
G Rpl30 ribosomal protein L30 involved_in ISO (PMID:15019208) RGD PMID:15019208 NCBI chr 7:65,648,470...65,651,363
Ensembl chr 7:65,645,991...65,651,363
JBrowse link
G Rpl39 ribosomal protein L39 involved_in ISO (PMID:12860195) RGD PMID:12860195 NCBI chr  X:116,327,183...116,330,211 JBrowse link
G Rps19 ribosomal protein S19 involved_in ISO (PMID:15019208) RGD PMID:15019208 NCBI chr 1:80,480,718...80,486,511
Ensembl chr 1:80,480,951...80,486,508
JBrowse link
G S100a7l2 S100 calcium binding protein A7 like 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:176,506,300...176,509,196
Ensembl chr 2:176,506,300...176,509,196
JBrowse link
G S100a9 S100 calcium binding protein A9 involved_in ISO
IBA
IEA
(PMID:12874352)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:12874352 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 2:176,190,361...176,193,182
Ensembl chr 2:176,190,361...176,193,230
JBrowse link
G S100vp S100 calcium-binding protein, ventral prostate involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:176,748,273...176,751,624
Ensembl chr 2:176,748,273...176,751,624
JBrowse link
G Semg1 semenogelin 1 involved_in ISO (PMID:18314226) RGD PMID:18314226 NCBI chr 3:152,910,033...152,912,882
Ensembl chr 3:152,910,034...152,912,882
JBrowse link
G Spag11a sperm associated antigen 11A involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,682,326...70,684,067
Ensembl chr16:70,682,326...70,684,069
JBrowse link
G Spag11b sperm associated antigen 11b involved_in ISO (PMID:16411022) RGD PMID:16411022
G Spag11bl sperm associated antigen 11b-like involved_in IBA
ISO
PMID:21873635
(PMID:16411022)
RGD PMID:16411022 PMID:21873635 RGD:13792537 NCBI chr16:70,697,810...70,700,336 JBrowse link
G Tac1 tachykinin, precursor 1 involved_in ISO (PMID:12074933), (PMID:18603306) RGD PMID:12074933 PMID:18603306 NCBI chr 4:35,679,183...35,687,180
Ensembl chr 4:35,679,704...35,687,178
JBrowse link
G Tslp thymic stromal lymphopoietin involved_in ISO (PMID:24850429) RGD PMID:24850429 NCBI chr18:24,447,409...24,454,244
Ensembl chr18:24,449,844...24,453,548
JBrowse link
G Vip vasoactive intestinal peptide involved_in ISO (PMID:18603306) RGD PMID:18603306 NCBI chr 1:42,064,878...42,073,219
Ensembl chr 1:42,065,120...42,073,216
JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in ISO (PMID:12949249) RGD PMID:12949249 NCBI chr13:77,248,865...77,252,308
Ensembl chr13:77,248,717...77,252,329
JBrowse link
antimicrobial humoral response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl3 BCL3, transcription coactivator acts_upstream_of_or_within ISO MGI:1861796 (MGI:85481|PMID:9009202) RGD PMID:9009202 MGI:85481 NCBI chr 1:79,471,368...79,485,908
Ensembl chr 1:79,471,369...79,485,607
JBrowse link
G Colec11 collectin sub-family member 11 involved_in ISO (PMID:20956340) RGD PMID:20956340 NCBI chr 6:45,223,974...45,256,640
Ensembl chr 6:45,223,980...45,271,145
JBrowse link
G Cst9l cystatin 9-like involved_in IBA
ISO
PMID:21873635
(MGI:5700490|PMID:23922243)
RGD PMID:23922243 PMID:21873635 MGI:5700490, RGD:13792537 NCBI chr 3:136,288,093...136,290,906
Ensembl chr 3:136,288,093...136,290,906
JBrowse link
G LOC689081 similar to cystatin E2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:136,302,588...136,336,782
Ensembl chr 3:136,305,152...136,308,899
JBrowse link
G Np4 defensin NP-4 precursor involved_in ISO (PMID:2500436) RGD PMID:2500436 NCBI chr16:70,494,607...70,497,261
Ensembl chr16:70,342,529...70,497,202
JBrowse link
antiviral innate immune response term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap1 A-kinase anchoring protein 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:31522117)
UniProt
Ensembl
RGD
PMID:31522117 GO_REF:0000024 GO_REF:0000107 NCBI chr10:73,621,021...73,654,123
Ensembl chr10:73,621,883...73,653,896
JBrowse link
G Atad3a ATPase family, AAA domain containing 3A involved_in ISO
ISS
(PMID:31522117)
GO_REF:0000024
RGD
UniProt
PMID:31522117 GO_REF:0000024 NCBI chr 5:166,350,302...166,370,492
Ensembl chr 5:166,350,304...166,370,482
JBrowse link
G Clpb caseinolytic mitochondrial matrix peptidase chaperone subunit B involved_in ISO
IEA
(PMID:31522117)
GO_REF:0000107
RGD
Ensembl
PMID:31522117 GO_REF:0000107 NCBI chr 1:156,028,740...156,158,183
Ensembl chr 1:156,028,930...156,168,788
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 involved_in ISO (PMID:25930096) RGD PMID:25930096 NCBI chr14:15,704,772...15,706,969
Ensembl chr14:15,704,758...15,706,975
JBrowse link
G Ddx58 DEXD/H-box helicase 58 involved_in ISO (PMID:28469175) RGD PMID:28469175 NCBI chr 5:55,321,229...55,369,947
Ensembl chr 5:55,321,235...55,370,819
JBrowse link
G Mx1 MX dynamin like GTPase 1 involved_in ISO (PMID:25930096) RGD PMID:25930096 NCBI chr11:36,799,659...36,825,209
Ensembl chr11:36,799,660...36,823,507
JBrowse link
G Nlrp1a NLR family, pyrin domain containing 1A involved_in ISO (PMID:33093214) RGD PMID:33093214 NCBI chr10:55,778,560...55,833,639
Ensembl chr10:55,778,560...55,825,180
JBrowse link
G Nlrp1b NLR family, pyrin domain containing 1B involved_in ISO (PMID:33542150) RGD PMID:33542150 NCBI chr10:55,838,381...55,904,374 JBrowse link
G Oas1a 2'-5' oligoadenylate synthetase 1A involved_in ISO (PMID:25930096) RGD PMID:25930096 NCBI chr12:35,669,798...35,680,505
Ensembl chr12:35,669,801...35,680,517
JBrowse link
G Phb prohibitin involved_in ISO (PMID:31522117) RGD PMID:31522117 NCBI chr10:80,605,268...80,618,043
Ensembl chr10:80,605,251...80,618,042
JBrowse link
G Phb2 prohibitin 2 involved_in ISO (PMID:31522117) RGD PMID:31522117 NCBI chr 4:157,517,662...157,522,268
Ensembl chr 4:157,517,577...157,522,272
JBrowse link
G Rnf135 ring finger protein 135 involved_in ISO
ISS
(PMID:28469175), (PMID:31006531)
(MGI:6152590|PMID:21147464), (MGI:6155526|PMID:23950712)
GO_REF:0000024
RGD
UniProt
PMID:21147464 PMID:23950712 PMID:28469175 PMID:31006531 GO_REF:0000024 MGI:6152590 MGI:6155526 NCBI chr10:65,170,560...65,189,791 JBrowse link
G Zdhhc1 zinc finger, DHHC-type containing 1 involved_in ISO (PMID:25299331)
(MGI:6392967|PMID:25299331)
RGD PMID:25299331 MGI:6392967 NCBI chr19:33,350,533...33,375,717
Ensembl chr19:33,350,533...33,375,616
JBrowse link
G Zdhhc11 zinc finger, DHHC-type containing 11 involved_in ISO (PMID:29429998)
(MGI:6414701|PMID:29429998)
RGD PMID:29429998 MGI:6414701 NCBI chr 1:29,296,216...29,327,227
Ensembl chr 1:29,296,334...29,326,898
JBrowse link
biosynthetic process of antibacterial peptides active against Gram-negative bacteria term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Elane elastase, neutrophil expressed involved_in ISO (PMID:20421939) RGD PMID:20421939 NCBI chr 7:9,817,251...9,819,174
Ensembl chr 7:9,817,252...9,819,100
JBrowse link
cell surface pattern recognition receptor signaling pathway term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fcna ficolin A involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 3:8,445,904...8,449,128
Ensembl chr 3:8,445,907...8,449,105
JBrowse link
G Fcnb ficolin B involved_in ISO (PMID:21037097) RGD PMID:21037097 NCBI chr 3:11,393,771...11,402,198
Ensembl chr 3:11,393,739...11,402,151
JBrowse link
G Ffar2 free fatty acid receptor 2 involved_in ISO
ISS
(PMID:21037097)
GO_REF:0000024
RGD
UniProt
PMID:21037097 GO_REF:0000024 NCBI chr 1:86,071,860...86,075,049
Ensembl chr 1:86,072,184...86,075,033
JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO MGI:2178675 (MGI:3042099|PMID:12719478) RGD PMID:12719478 MGI:3042099 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
cellular response to bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd36 CD36 molecule acts_upstream_of_or_within ISO MGI:1931790|MGI:3573941 (MGI:3528769|PMID:15690042) RGD PMID:15690042 MGI:3528769 NCBI chr 4:17,317,343...17,410,084 JBrowse link
G Tirap TIR domain containing adaptor protein acts_upstream_of_or_within ISO MGI:3573942 (MGI:3528769|PMID:15690042) RGD PMID:15690042 MGI:3528769 NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432
JBrowse link
G Tlr1 toll-like receptor 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:43,384,127...43,396,765
Ensembl chr14:43,384,932...43,397,125
JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within ISO MGI:2674036 (MGI:3528769|PMID:15690042) RGD PMID:15690042 MGI:3528769 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
G Tlr6 toll-like receptor 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:43,362,164...43,374,500
Ensembl chr14:43,362,164...43,375,685
JBrowse link
cellular response to diacyl bacterial lipopeptide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd14 CD14 molecule involved_in ISS
ISO
GO_REF:0000024
(PMID:16880211)
UniProt
RGD
PMID:16880211 GO_REF:0000024 NCBI chr18:28,335,522...28,337,383
Ensembl chr18:28,335,340...28,337,261
JBrowse link
G Cd36 CD36 molecule involved_in ISO
ISS
(PMID:16880211)
GO_REF:0000024
RGD
UniProt
PMID:16880211 GO_REF:0000024 NCBI chr 4:17,317,343...17,410,084 JBrowse link
G Tlr2 toll-like receptor 2 involved_in
acts_upstream_of_or_within
ISO (PMID:16880211)
(PMID:19931471)
RGD PMID:16880211 PMID:19931471 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
G Tlr6 toll-like receptor 6 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:19931471)
(PMID:16880211)
RGD PMID:16880211 PMID:19931471 PMID:21873635 RGD:13792537 NCBI chr14:43,362,164...43,374,500
Ensembl chr14:43,362,164...43,375,685
JBrowse link
cellular response to external biotic stimulus term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:16353156 RGD:2316359 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709
JBrowse link
G Abcb1b ATP-binding cassette, subfamily B (MDR/TAP), member 1B IEP RGD PMID:16353156 RGD:2316359 NCBI chr 4:25,242,761...25,325,194
Ensembl chr 4:25,242,798...25,325,199
JBrowse link
G Cda cytidine deaminase IEP K-selection - confluent culture RGD PMID:16353156 RGD:2316359 NCBI chr 5:150,556,615...150,583,231
Ensembl chr 5:150,556,615...150,583,231
JBrowse link
cellular response to interferon-gamma term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (MGI:5489057|PMID:19014335) RGD PMID:19014335 MGI:5489057 NCBI chr15:79,871,819...79,881,101
Ensembl chr15:79,871,827...79,880,529
JBrowse link
G Actg1 actin, gamma 1 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232
JBrowse link
G Actr2 actin related protein 2 acts_upstream_of_or_within ISO MGI:1921367 (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr14:94,296,443...94,333,735
Ensembl chr14:94,296,443...94,340,524
JBrowse link
G Actr3 actin related protein 3 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1913963 (MGI:3828867|PMID:19144319)
Ensembl
RGD
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 IEP RGD PMID:18433458 RGD:2315954 NCBI chr 3:10,299,264...10,338,464
Ensembl chr 3:10,300,028...10,346,687
JBrowse link
G Aif1 allograft inflammatory factor 1 involved_in ISO
IEP
(PMID:9614071)
PMID:7769138
RGD PMID:9614071 PMID:7769138 RGD:61535 NCBI chr20:3,646,784...3,652,670
Ensembl chr20:3,646,777...3,652,668
JBrowse link
G Aqp4 aquaporin 4 involved_in ISO
IEA
(PMID:17645239)
GO_REF:0000107
RGD
Ensembl
PMID:17645239 GO_REF:0000107 NCBI chr18:6,507,903...6,524,558
Ensembl chr18:6,507,903...6,524,856
JBrowse link
G Arg2 arginase 2 IEP RGD PMID:11250887 RGD:4144048 NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378
JBrowse link
G Asl argininosuccinate lyase IEP with TNFalpha RGD PMID:11072090 RGD:4139899 NCBI chr12:26,659,664...26,677,136
Ensembl chr12:26,659,565...26,679,662
JBrowse link
G Ass1 argininosuccinate synthase 1 IEP with TNFalpha RGD PMID:12589771 PMID:11072090 RGD:1599307, RGD:4139899 NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903
JBrowse link
G Capg capping actin protein, gelsolin like acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 4:104,594,743...104,611,856
Ensembl chr 4:104,594,753...104,611,856
JBrowse link
G Casp1 caspase 1 involved_in ISO
IEA
(PMID:11536016)
GO_REF:0000107
RGD
Ensembl
PMID:11536016 GO_REF:0000107 NCBI chr 8:2,587,812...2,597,403
Ensembl chr 8:2,587,831...2,597,383
JBrowse link
G Ccl1 C-C motif chemokine ligand 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:67,128,331...67,131,109
Ensembl chr10:67,128,331...67,131,159
JBrowse link
G Ccl11 C-C motif chemokine ligand 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:67,028,328...67,032,929
Ensembl chr10:67,028,328...67,032,926
JBrowse link
G Ccl12 chemokine (C-C motif) ligand 12 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:67,070,230...67,071,780
Ensembl chr10:67,070,230...67,071,780
JBrowse link
G Ccl17 C-C motif chemokine ligand 17 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,202,317...10,203,768
Ensembl chr19:10,202,128...10,203,819
JBrowse link
G Ccl19 C-C motif chemokine ligand 19 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:56,963,364...56,965,308
Ensembl chr 5:56,963,364...56,965,308
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 involved_in IEP
ISO
IBA
(MGI:3699670|PMID:14662900)
PMID:21873635
(PMID:9407497)
RGD PMID:9407497 PMID:14662900 PMID:14512159 PMID:21873635 MGI:3699670, RGD:8548859, RGD:13792537 NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
JBrowse link
G Ccl20 C-C motif chemokine ligand 20 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:84,389,031...84,391,629
Ensembl chr 9:84,388,904...84,391,629
JBrowse link
G Ccl21 C-C motif chemokine ligand 21 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:56,980,557...56,981,661
Ensembl chr 5:56,980,558...56,981,686
JBrowse link
G Ccl22 C-C motif chemokine ligand 22 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,257,602...10,264,373
Ensembl chr19:10,257,601...10,264,400
JBrowse link
G Ccl24 C-C motif chemokine ligand 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:21,100,835...21,104,832
Ensembl chr12:21,100,835...21,104,893
JBrowse link
G Ccl25 C-C motif chemokine ligand 25 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:2,707,398...2,716,571
Ensembl chr12:2,707,398...2,716,554
JBrowse link
G Ccl26 C-C motif chemokine ligand 26 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:21,109,384...21,114,336
Ensembl chr12:21,109,421...21,114,335
JBrowse link
G Ccl3 C-C motif chemokine ligand 3 involved_in IBA
ISO
PMID:21873635
(PMID:9407497)
RGD PMID:9407497 PMID:21873635 RGD:13792537 NCBI chr10:68,451,388...68,452,938
Ensembl chr10:68,451,388...68,452,938
JBrowse link
G Ccl4 C-C motif chemokine ligand 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:68,466,469...68,467,941
Ensembl chr10:68,452,052...68,468,231
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 involved_in ISO
IBA
(PMID:9407497)
PMID:21873635
RGD PMID:9407497 PMID:21873635 RGD:13792537 NCBI chr10:68,322,826...68,327,365
Ensembl chr10:68,322,829...68,327,377
JBrowse link
G Ccl6 C-C motif chemokine ligand 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:68,381,179...68,385,811
Ensembl chr10:68,380,188...68,384,001
JBrowse link
G Ccl7 C-C motif chemokine ligand 7 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:67,016,446...67,018,296
Ensembl chr10:67,016,446...67,018,303
JBrowse link
G Ccl9 chemokine (C-C motif) ligand 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:68,366,486...68,371,408
Ensembl chr10:68,366,487...68,371,369
JBrowse link
G Cd47 Cd47 molecule involved_in IMP PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr11:50,906,052...50,970,000
Ensembl chr11:50,906,177...50,969,425
JBrowse link
G Cdc42 cell division cycle 42 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 5:149,555,069...149,593,239
Ensembl chr 5:149,553,724...149,593,111
JBrowse link
G Cdc42ep2 CDC42 effector protein 2 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 1:203,202,000...203,210,891
Ensembl chr 1:203,201,873...203,210,897
JBrowse link
G Cdc42ep4 CDC42 effector protein 4 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr10:98,772,613...98,797,924
Ensembl chr10:98,772,495...98,797,695
JBrowse link
G Cfh complement factor H IEP RGD PMID:12121434 RGD:632369 NCBI chr13:51,512,376...51,613,829
Ensembl chr13:51,511,828...51,613,838
JBrowse link
G Ciita class II, major histocompatibility complex, transactivator IEP RGD PMID:11071855 RGD:632488 NCBI chr10:5,139,947...5,187,493
Ensembl chr10:5,140,178...5,187,440
JBrowse link
G Cldn1 claudin 1 IEP RGD PMID:18768927 RGD:11344890 NCBI chr11:74,421,569...74,436,728
Ensembl chr11:74,421,569...74,436,724
JBrowse link
G Cx3cl1 C-X3-C motif chemokine ligand 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr19:10,227,337...10,237,826
Ensembl chr19:10,227,340...10,236,833
JBrowse link
G Cyp11b1 cytochrome P450, family 11, subfamily b, polypeptide 1 IEP RGD PMID:12121434 RGD:632369 NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278
JBrowse link
G Dapk1 death associated protein kinase 1 involved_in ISO (PMID:18995835)
(MGI:5466658|PMID:23071094)
RGD PMID:18995835 PMID:23071094 MGI:5466658 NCBI chr17:3,930,223...4,090,991
Ensembl chr17:3,930,213...4,090,991
JBrowse link
G Dapk3 death-associated protein kinase 3 involved_in ISO (PMID:18995835)
(MGI:5466658|PMID:23071094)
RGD PMID:18995835 PMID:23071094 MGI:5466658 NCBI chr 7:8,524,182...8,532,552
Ensembl chr 7:8,524,183...8,532,558
JBrowse link
G Edn1 endothelin 1 IEP RGD PMID:22301113 RGD:8662301 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Eprs glutamyl-prolyl-tRNA synthetase involved_in
acts_upstream_of_or_within
ISO (PMID:15479637)
(MGI:5466658|PMID:23071094)
RGD PMID:15479637 PMID:23071094 MGI:5466658 NCBI chr13:96,901,548...96,971,966
Ensembl chr13:96,901,575...96,971,966
JBrowse link
G Evl Enah/Vasp-like acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 6:127,473,119...127,594,342
Ensembl chr 6:127,474,543...127,594,344
JBrowse link
G Fas Fas cell surface death receptor IEP RGD PMID:10029626 RGD:14700709 NCBI chr 1:231,798,963...231,832,591
Ensembl chr 1:231,798,960...231,832,591
JBrowse link
G Faslg Fas ligand IEP RGD PMID:10029626 RGD:14700709 NCBI chr13:74,151,519...74,172,760
Ensembl chr13:74,154,954...74,162,215
JBrowse link
G Fcar Fc fragment of IgA receptor involved_in ISO (PMID:25339672) RGD PMID:25339672 NCBI chr 1:69,626,458...69,660,558 JBrowse link
G Flnb filamin B acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr15:16,961,999...17,095,059
Ensembl chr15:16,962,003...17,095,006
JBrowse link
G Gapdh glyceraldehyde-3-phosphate dehydrogenase involved_in ISO (PMID:15479637) RGD PMID:15479637 NCBI chr 4:157,962,312...157,967,158
Ensembl chr 4:157,962,343...157,966,235
JBrowse link
G Gbp1 guanylate binding protein 1 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:17266443), (PMID:21151871)
(MGI:4412460|PMID:18025219)
PMID:21873635
RGD PMID:17266443 PMID:18025219 PMID:21151871 PMID:21873635 MGI:4412460, RGD:13792537 NCBI chr 2:231,398,136...231,432,773
Ensembl chr 2:231,517,398...231,529,600
JBrowse link
G Gbp2 guanylate binding protein 2 involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
(MGI:4412460|PMID:18025219)
GO_REF:0000107
(PMID:17266443)
RGD
Ensembl
PMID:17266443 PMID:18025219 PMID:21873635 GO_REF:0000107 MGI:4412460, RGD:13792537 NCBI chr 2:231,332,488...231,348,573
Ensembl chr 2:231,332,284...231,348,571
JBrowse link
G Gbp3 guanylate binding protein 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:231,460,032...231,500,266
Ensembl chr 2:231,486,062...231,493,098
JBrowse link
G Gbp4 guanylate binding protein 4 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:17266443)
(MGI:4412460|PMID:18025219)
PMID:21873635
RGD PMID:17266443 PMID:18025219 PMID:21873635 MGI:4412460, RGD:13792537 NCBI chr 2:231,304,910...231,318,883
Ensembl chr 2:231,305,244...231,318,879
JBrowse link
G Gbp5 guanylate binding protein 5 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:17266443)
(MGI:4412460|PMID:18025219)
PMID:21873635
RGD PMID:17266443 PMID:18025219 PMID:21873635 MGI:4412460, RGD:13792537 NCBI chr 2:231,237,748...231,257,071
Ensembl chr 2:231,237,748...231,257,061
JBrowse link
G Gbp6 guanylate binding protein family member 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:4,730,286...4,756,508
Ensembl chr14:4,663,614...4,678,985
JBrowse link
G Gsn gelsolin acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 3:18,585,166...18,638,404
Ensembl chr 3:18,585,172...18,638,402
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:7865494 RGD:11520781 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Il12b interleukin 12B acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219) RGD PMID:18025219 MGI:4412460 NCBI chr10:28,888,832...28,903,796
Ensembl chr10:28,893,008...28,902,903
JBrowse link
G Il12rb1 interleukin 12 receptor subunit beta 1 involved_in ISO (PMID:12023369) RGD PMID:12023369 NCBI chr16:18,620,228...18,633,207
Ensembl chr16:18,620,770...18,632,769
JBrowse link
G Il18 interleukin 18 IEP RGD PMID:18547159 RGD:4889457 NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
JBrowse link
G Irf8 interferon regulatory factor 8 involved_in ISO (PMID:25122610) RGD PMID:25122610 NCBI chr19:48,790,483...48,812,363
Ensembl chr19:48,790,588...48,811,829
JBrowse link
G Irgm immunity-related GTPase M acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
JBrowse link
G Kif16b kinesin family member 16B acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 3:129,974,692...130,254,194
Ensembl chr 3:129,974,800...130,254,019
JBrowse link
G Kif5b kinesin family member 5B acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr17:51,489,873...51,527,508
Ensembl chr17:51,489,944...51,527,508
JBrowse link
G Lgals9 galectin 9 involved_in ISO (PMID:23817958) RGD PMID:23817958 NCBI chr10:63,907,018...63,930,224
Ensembl chr10:63,907,018...63,930,045
JBrowse link
G LOC103690086 uncharacterized LOC103690086 acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219) RGD PMID:18025219 MGI:4412460
G LOC685067 similar to guanylate binding protein family, member 6 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:231,275,521...231,297,289
Ensembl chr 2:231,275,640...231,297,278
JBrowse link
G Mrc1 mannose receptor, C type 1 acts_upstream_of_or_within ISO (MGI:5486412|PMID:22832163) RGD PMID:22832163 MGI:5486412 NCBI chr17:77,249,187...77,330,857
Ensembl chr17:77,249,187...77,330,857
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:7524476 RGD:10059620 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Myo18a myosin XVIIIa acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr10:62,654,218...62,755,464
Ensembl chr10:62,654,281...62,755,468
JBrowse link
G Myo1c myosin 1C acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr10:60,498,374...60,520,752
Ensembl chr10:60,498,280...60,520,752
JBrowse link
G Nos2 nitric oxide synthase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:4412460|PMID:18025219)
Ensembl
RGD
PMID:18025219 GO_REF:0000107 MGI:4412460 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Pde12 phosphodiesterase 12 involved_in IEA
ISO
GO_REF:0000107
(PMID:15231837)
Ensembl
RGD
PMID:15231837 GO_REF:0000107 NCBI chr16:1,915,386...1,925,427
Ensembl chr16:1,915,386...1,925,887
JBrowse link
G Pecam1 platelet and endothelial cell adhesion molecule 1 IEP RGD PMID:18466611 RGD:2311658 NCBI chr10:91,590,521...91,652,279
Ensembl chr10:91,590,521...91,652,116
JBrowse link
G Rab11fip5 RAB11 family interacting protein 5 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 4:117,871,301...117,908,819
Ensembl chr 4:117,871,308...117,908,741
JBrowse link
G Rab12 RAB12, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 9:106,480,301...106,506,895
Ensembl chr 9:106,480,301...106,506,910
JBrowse link
G Rab20 RAB20, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr16:78,019,337...78,043,529
Ensembl chr16:78,019,337...78,043,529
JBrowse link
G Rab43 RAB43, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 4:120,249,878...120,269,174
Ensembl chr 4:120,249,879...120,269,174
JBrowse link
G Rab7b Rab7b, member RAS oncogene family acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr13:43,121,168...43,147,581
Ensembl chr13:43,121,226...43,147,581
JBrowse link
G Rpl13a ribosomal protein L13A involved_in ISO (PMID:15479637)
(MGI:5466658|PMID:23071094)
RGD PMID:15479637 PMID:23071094 MGI:5466658 NCBI chr 1:95,609,374...95,612,557 JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 involved_in ISO (MGI:5913528|PMID:28178239) RGD PMID:28178239 MGI:5913528 NCBI chr10:71,323,777...71,367,908
Ensembl chr10:71,323,777...71,367,908
JBrowse link
G RT1-Bb RT1 class II, locus Bb involved_in IEA
ISO
GO_REF:0000107
(MGI:4942269|PMID:9244347), (MGI:4942274|PMID:7691725), (MGI:4942276|PMID:2502420), (MGI:4942277|PMID:2493384), (MGI:4943415|PMID:1845803)
Ensembl
RGD
PMID:1845803 PMID:2493384 PMID:2502420 PMID:7691725 PMID:9244347 GO_REF:0000107 MGI:4942269 MGI:4942274 MGI:4942276 MGI:4942277 MGI:4943415 NCBI chr20:4,596,558...4,602,201
Ensembl chr20:4,596,559...4,607,597
JBrowse link
G RT1-Ha RT1 class II, locus Ha involved_in ISO (PMID:8568247) RGD PMID:8568247 NCBI chr20:4,760,631...4,770,662 JBrowse link
G Serpina3n serine (or cysteine) peptidase inhibitor, clade A, member 3N IEP RGD PMID:7619083 RGD:5147424 NCBI chr 6:123,323,632...123,331,166 JBrowse link
G Sirpa signal-regulatory protein alpha involved_in IMP PMID:12023387 ARUK-UCL PMID:12023387 RGD:625650 NCBI chr 3:116,819,730...116,858,099
Ensembl chr 3:116,819,726...116,858,098
JBrowse link
G Slc26a6 solute carrier family 26 member 6 involved_in ISO (PMID:18655181) RGD PMID:18655181 NCBI chr 8:109,558,968...109,569,778
Ensembl chr 8:109,559,642...109,569,778
JBrowse link
G Star steroidogenic acute regulatory protein IEP RGD PMID:9564825 RGD:4891971 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
G Stat1 signal transducer and activator of transcription 1 involved_in ISO (PMID:23386060) RGD PMID:23386060 NCBI chr 9:49,419,561...49,459,969 JBrowse link
G Stx11 syntaxin 11 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 1:7,293,427...7,320,060
Ensembl chr 1:7,289,976...7,320,164
JBrowse link
G Stx4 syntaxin 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3828867|PMID:19144319)
Ensembl
RGD
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr 1:182,451,108...182,459,701
Ensembl chr 1:182,451,117...182,459,979
JBrowse link
G Stx8 syntaxin 8 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr10:52,655,643...52,900,048
Ensembl chr10:52,654,990...52,894,993
JBrowse link
G Stxbp1 syntaxin binding protein 1 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 3:16,076,725...16,138,431
Ensembl chr 3:16,076,391...16,138,369
JBrowse link
G Stxbp2 syntaxin binding protein 2 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr12:1,689,364...1,701,145
Ensembl chr12:1,689,410...1,700,458
JBrowse link
G Stxbp3 syntaxin binding protein 3 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 2:196,442,738...196,485,733
Ensembl chr 2:196,442,634...196,485,671
JBrowse link
G Stxbp4 syntaxin binding protein 4 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr10:75,301,868...75,458,741
Ensembl chr10:75,305,463...75,458,663
JBrowse link
G Syncrip synaptotagmin binding, cytoplasmic RNA interacting protein involved_in ISO (PMID:15479637) RGD PMID:15479637 NCBI chr 8:89,402,487...89,435,517
Ensembl chr 8:89,402,866...89,435,515
JBrowse link
G Tdgf1 teratocarcinoma-derived growth factor 1 involved_in ISO (PMID:17720976) RGD PMID:17720976 NCBI chr 8:110,924,774...110,938,545
Ensembl chr 8:110,925,024...110,930,308
JBrowse link
G Tlr2 toll-like receptor 2 involved_in ISO (PMID:11672593) RGD PMID:11672593 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
G Tlr3 toll-like receptor 3 NOT IEP intestinal epithelial cells
thyrocytes
RGD PMID:16638093 PMID:15661832 RGD:5128794, RGD:5128798 NCBI chr16:46,821,980...46,837,900
Ensembl chr16:46,822,039...46,836,545
JBrowse link
G Tlr4 toll-like receptor 4 involved_in ISO
IEA
(PMID:11672593)
GO_REF:0000107
RGD
Ensembl
PMID:11672593 GO_REF:0000107 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Tnf tumor necrosis factor IEP RGD PMID:16525716 RGD:14985246 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Vamp3 vesicle-associated membrane protein 3 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 5:161,498,109...161,508,704
Ensembl chr 5:161,498,109...161,508,751
JBrowse link
G Vamp4 vesicle-associated membrane protein 4 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr13:74,919,872...74,942,791
Ensembl chr13:74,919,880...74,933,686
JBrowse link
G Vamp8 vesicle-associated membrane protein 8 acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 4:104,442,383...104,452,884
Ensembl chr 4:104,442,393...104,452,897
JBrowse link
G Vim vimentin involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3828867|PMID:19144319)
Ensembl
RGD
PMID:19144319 GO_REF:0000107 MGI:3828867 NCBI chr17:76,668,701...76,677,186
Ensembl chr17:76,668,647...76,677,187
JBrowse link
G Vps26b VPS26 retromer complex component B acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 8:25,415,877...25,436,985
Ensembl chr 8:25,415,261...25,436,985
JBrowse link
G Was WASP actin nucleation promoting factor acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr  X:14,405,096...14,413,850
Ensembl chr  X:14,405,124...14,413,849
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO
IEA
(PMID:18174455)
GO_REF:0000107
RGD
Ensembl
PMID:18174455 GO_REF:0000107 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
G Xcl1 X-C motif chemokine ligand 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:77,248,865...77,252,308
Ensembl chr13:77,248,717...77,252,329
JBrowse link
G Zyx zyxin acts_upstream_of_or_within ISO (MGI:3828867|PMID:19144319) RGD PMID:19144319 MGI:3828867 NCBI chr 4:71,236,767...71,246,553
Ensembl chr 4:71,237,451...71,246,553
JBrowse link
cellular response to lectin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myc MYC proto-oncogene, bHLH transcription factor IEP RGD PMID:2200903 RGD:10059628 NCBI chr 7:93,593,705...93,598,633
Ensembl chr 7:93,593,705...93,598,630
JBrowse link
G Plcg2 phospholipase C, gamma 2 involved_in ISO (MGI:3844414|PMID:19136564) RGD PMID:19136564 MGI:3844414 NCBI chr19:45,547,416...45,683,930
Ensembl chr19:45,547,416...45,683,930
JBrowse link
G Syk spleen associated tyrosine kinase involved_in ISO (MGI:3844414|PMID:19136564) RGD PMID:19136564 MGI:3844414 NCBI chr17:12,604,615...12,678,437
Ensembl chr17:12,604,619...12,661,410
JBrowse link
cellular response to lipopolysaccharide term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca1 ATP binding cassette subfamily A member 1 involved_in ISO (MGI:4411947|PMID:19752193) RGD PMID:19752193 MGI:4411947 NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170
JBrowse link
G Abcb1a ATP binding cassette subfamily B member 1A IEP RGD PMID:20300455 RGD:39456124 NCBI chr 4:25,357,467...25,529,941
Ensembl chr 4:25,158,362...25,442,709
JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 IEP RGD PMID:20702406 RGD:11081005 NCBI chr 1:242,664,657...242,723,239
Ensembl chr 1:242,664,657...242,723,238
JBrowse link
G Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:1856663 (MGI:82358|PMID:8806812) RGD PMID:8806812 MGI:82358 NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
JBrowse link
G Acod1 aconitate decarboxylase 1 involved_in ISO (PMID:23609450), (PMID:23610393)
(MGI:5490395|PMID:23610393), (MGI:5490396|PMID:23609450)
RGD PMID:23609450 PMID:23610393 MGI:5490395 MGI:5490396 NCBI chr15:79,871,819...79,881,101
Ensembl chr15:79,871,827...79,880,529
JBrowse link
G Adam9 ADAM metallopeptidase domain 9 involved_in ISO (PMID:22480688) RGD PMID:22480688 NCBI chr16:67,022,538...67,101,647
Ensembl chr16:67,022,655...67,100,917
JBrowse link
G Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif, 13 IEP RGD PMID:22871409 RGD:7207038 NCBI chr 3:10,299,264...10,338,464
Ensembl chr 3:10,300,028...10,346,687
JBrowse link
G Aicda activation-induced cytidine deaminase acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 4:155,774,132...155,783,972
Ensembl chr 4:155,774,132...155,783,972
JBrowse link
G Akap8 A-kinase anchoring protein 8 involved_in ISO (MGI:5763364|PMID:19531803) RGD PMID:19531803 MGI:5763364 NCBI chr 7:11,316,224...11,332,523
Ensembl chr 7:11,316,228...11,332,399
JBrowse link
G Ankrd1 ankyrin repeat domain 1 involved_in ISO (PMID:7730328)
(MGI:5294542|PMID:17239933)
RGD PMID:7730328 PMID:17239933 MGI:5294542 NCBI chr 1:233,815,851...233,834,891
Ensembl chr 1:233,815,851...233,834,919
JBrowse link
G Arg1 arginase 1 IEP RGD PMID:9013624 RGD:4144055 NCBI chr 1:20,475,878...20,488,422
Ensembl chr 1:20,475,968...20,488,422
JBrowse link
G Arg2 arginase 2 IEP RGD PMID:11250887 RGD:4144048 NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378
JBrowse link
G Arid5a AT-rich interaction domain 5A involved_in ISO (MGI:5887181|PMID:27671645) RGD PMID:27671645 MGI:5887181 NCBI chr 9:38,534,612...38,549,467
Ensembl chr 9:38,534,590...38,547,597
JBrowse link
G Ass1 argininosuccinate synthase 1 IEP alveolar macrophages RGD PMID:9879717 RGD:4139906 NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903
JBrowse link
G Axl Axl receptor tyrosine kinase involved_in ISO (PMID:19657094) RGD PMID:19657094 NCBI chr 1:81,265,656...81,296,278
Ensembl chr 1:81,265,088...81,296,265
JBrowse link
G B2m beta-2 microglobulin involved_in ISO (PMID:23144825) RGD PMID:23144825 NCBI chr 3:109,095,740...109,101,764
Ensembl chr 3:109,095,729...109,101,766
JBrowse link
G Bcl10 BCL10, immune signaling adaptor involved_in ISS
ISO
GO_REF:0000024
(PMID:16831874)
UniProt
RGD
PMID:16831874 GO_REF:0000024 NCBI chr 2:234,840,880...234,850,520
Ensembl chr 2:234,840,858...234,850,523
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase acts_upstream_of_or_within ISO MGI:2154396 (MGI:71493|PMID:7889565) RGD PMID:7889565 MGI:71493 NCBI chr20:13,471,679...13,596,497
Ensembl chr20:13,471,668...13,597,016
JBrowse link
G Bpi bactericidal/permeability-increasing protein involved_in ISO (PMID:1937776) RGD PMID:1937776 NCBI chr 3:146,909,626...146,936,487
Ensembl chr 3:146,909,629...146,936,221
JBrowse link
G Bysl bystin-like IEP RGD PMID:15305856 RGD:2316201 NCBI chr 9:13,382,806...13,392,557
Ensembl chr 9:13,382,557...13,394,339
JBrowse link
G Cactin cactin, spliceosome C complex subunit involved_in ISO (PMID:20829348) RGD PMID:20829348 NCBI chr 7:8,391,396...8,397,219
Ensembl chr 7:8,391,397...8,396,829
JBrowse link
G Camp cathelicidin antimicrobial peptide IEP RGD PMID:19879657 RGD:2316237 NCBI chr 8:109,841,729...109,843,543
Ensembl chr 8:109,841,729...109,843,543
JBrowse link
G Capn2 calpain 2 IEP RGD PMID:23390485 RGD:13792657 NCBI chr13:94,150,244...94,200,969
Ensembl chr13:94,150,240...94,200,969
JBrowse link
G Casp1 caspase 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:11536016)
Ensembl
RGD
PMID:11536016 GO_REF:0000107 NCBI chr 8:2,587,812...2,597,403
Ensembl chr 8:2,587,831...2,597,383
JBrowse link
G Ccl2 C-C motif chemokine ligand 2 involved_in IEP
ISO
(MGI:3699670|PMID:14662900) RGD PMID:14662900 PMID:8921263 MGI:3699670, RGD:8549522 NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226
JBrowse link
G Ccl20 C-C motif chemokine ligand 20 IEP RGD PMID:15618187 RGD:7483631 NCBI chr 9:84,389,031...84,391,629
Ensembl chr 9:84,388,904...84,391,629
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IEP RGD PMID:20578038 RGD:4889899 NCBI chr10:68,322,826...68,327,365
Ensembl chr10:68,322,829...68,327,377
JBrowse link
G Ccr5 C-C motif chemokine receptor 5 involved_in IEA
ISO
GO_REF:0000107
(PMID:10679098)
Ensembl
RGD
PMID:10679098 GO_REF:0000107 NCBI chr 8:123,752,423...123,757,538
Ensembl chr 8:123,752,325...123,759,260
JBrowse link
G Cd14 CD14 molecule acts_upstream_of_or_within
involved_in
IEP
ISO
ISS
(PMID:12594207)
(PMID:8612135)
(MGI:5645195|PMID:24380872), (MGI:80217|PMID:8612135)
GO_REF:0000024
RGD
UniProt
PMID:8612135 PMID:12594207 PMID:24380872 PMID:22511970 GO_REF:0000024 MGI:5645195 MGI:80217, RGD:7183752 NCBI chr18:28,335,522...28,337,383
Ensembl chr18:28,335,340...28,337,261
JBrowse link
G Cd180 CD180 molecule involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3581654 (MGI:1860539|PMID:10880523)
RGD PMID:10880523 PMID:21873635 MGI:1860539, RGD:13792537 NCBI chr 2:33,855,940...33,870,046
Ensembl chr 2:33,855,991...33,899,936
JBrowse link
G Cd274 CD274 molecule involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:227,116,627...227,137,379
Ensembl chr 1:227,116,649...227,134,450
JBrowse link
G Cd300lb CD300 molecule-like family member b acts_upstream_of_or_within ISO MGI:4829592 (MGI:5446972|PMID:22772446) RGD PMID:22772446 MGI:5446972 NCBI chr10:99,964,801...99,974,790
Ensembl chr10:99,964,801...99,974,790
JBrowse link
G Cd36 CD36 molecule acts_upstream_of_or_within ISO MGI:2447190 (MGI:3587138|PMID:16061696) RGD PMID:16061696 MGI:3587138 NCBI chr 4:17,317,343...17,410,084 JBrowse link
G Cd40 CD40 molecule IEP RGD PMID:19271152 RGD:5491178 NCBI chr 3:153,790,372...153,805,279
Ensembl chr 3:153,790,449...153,805,534
JBrowse link
G Cd68 Cd68 molecule involved_in ISO (MGI:6274946|PMID:16157452) RGD PMID:16157452 MGI:6274946 NCBI chr10:54,381,814...54,383,693
Ensembl chr10:54,381,815...54,383,697
JBrowse link
G Cd80 Cd80 molecule involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:3828894|PMID:19047410)
RGD PMID:19047410 PMID:21873635 MGI:3828894, RGD:13792537 NCBI chr11:62,254,543...62,293,414
Ensembl chr11:62,254,624...62,292,030
JBrowse link
G Cd86 CD86 molecule acts_upstream_of_or_within
involved_in
IEP
ISO
IBA
(MGI:3828894|PMID:19047410)
PMID:21873635
RGD PMID:19047410 PMID:21039614 PMID:21873635 MGI:3828894, RGD:4892198, RGD:13792537 NCBI chr11:64,142,193...64,200,816
Ensembl chr11:64,163,828...64,200,818
JBrowse link
G Cdc73 cell division cycle 73 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5319608|PMID:17911113)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:17911113 GO_REF:0000024 GO_REF:0000107 MGI:5319608 NCBI chr13:55,357,226...55,449,690
Ensembl chr13:55,357,226...55,449,656
JBrowse link
G Cdk19 cyclin-dependent kinase 19 IEP RGD PMID:20066559 RGD:9590278 NCBI chr20:43,770,409...43,910,629
Ensembl chr20:43,770,409...43,910,628
JBrowse link
G Cdk4 cyclin-dependent kinase 4 acts_upstream_of_or_within ISO (MGI:78049|PMID:8543804) RGD PMID:8543804 MGI:78049 NCBI chr 7:62,885,647...62,889,562
Ensembl chr 7:62,883,105...62,942,403
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta IDA RGD PMID:18405661 RGD:10401220 NCBI chr 3:156,398,035...156,399,466
Ensembl chr 3:156,397,052...156,399,473
JBrowse link
G Cebpe CCAAT/enhancer binding protein epsilon IEP RGD PMID:9593684 RGD:728287 NCBI chr15:28,169,885...28,171,283
Ensembl chr15:28,169,704...28,171,814
JBrowse link
G Cfh complement factor H acts_upstream_of_or_within IEP
ISO
(MGI:4421084|PMID:19828624) RGD PMID:19828624 PMID:12121434 MGI:4421084, RGD:632369 NCBI chr13:51,512,376...51,613,829
Ensembl chr13:51,511,828...51,613,838
JBrowse link
G Chmp5 charged multivesicular body protein 5 involved_in ISO
ISS
(PMID:27812135)
GO_REF:0000024
RGD
UniProt
PMID:27812135 GO_REF:0000024 NCBI chr 5:56,081,385...56,098,529
Ensembl chr 5:56,081,343...56,098,529
JBrowse link
G Cmpk2 cytidine/uridine monophosphate kinase 2 acts_upstream_of_or_within ISO (MGI:73245|PMID:7751651) RGD PMID:7751651 MGI:73245 NCBI chr 6:43,073,706...43,085,183
Ensembl chr 6:43,073,796...43,085,183
JBrowse link
G Cpeb1 cytoplasmic polyadenylation element binding protein 1 IEP RGD PMID:21620800 RGD:9685153 NCBI chr 1:135,300,048...135,407,688
Ensembl chr 1:135,300,461...135,409,760
JBrowse link
G Cr2 complement C3d receptor 2 acts_upstream_of_or_within ISO (MGI:4421084|PMID:19828624) RGD PMID:19828624 MGI:4421084 NCBI chr13:106,678,579...106,716,595
Ensembl chr13:106,685,413...106,716,235
JBrowse link
G Csf2 colony stimulating factor 2 IEP RGD PMID:18387647 RGD:5131517 NCBI chr10:38,386,945...38,388,926
Ensembl chr10:38,386,945...38,389,199
JBrowse link
G Csf3 colony stimulating factor 3 IEP RGD PMID:19732808 RGD:5133735 NCBI chr10:83,660,787...83,664,569
Ensembl chr10:83,661,207...83,663,603
JBrowse link
G Ctr9 CTR9 homolog, Paf1/RNA polymerase II complex component involved_in ISO (MGI:5319608|PMID:17911113) RGD PMID:17911113 MGI:5319608 NCBI chr 1:165,137,277...165,167,303
Ensembl chr 1:165,137,215...165,167,303
JBrowse link
G Ctsg cathepsin G involved_in ISO
IEA
(PMID:1937776)
GO_REF:0000107
RGD
Ensembl
PMID:1937776 GO_REF:0000107 NCBI chr15:29,930,988...29,937,353
Ensembl chr15:29,931,003...29,937,353
JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 involved_in IEP
ISO
UniProtKB:P05067 (MGI:6162390|PMID:23499256) RGD PMID:23499256 PMID:10422773 MGI:6162390, RGD:4892028 NCBI chr 8:119,785,726...119,799,431
Ensembl chr 8:119,782,595...119,800,014
JBrowse link
G Cxcl1 C-X-C motif chemokine ligand 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:17,193,364...17,195,143
Ensembl chr14:17,193,365...17,195,215
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(PMID:23776175)
RGD PMID:23776175 PMID:21873635 RGD:13792537 NCBI chr14:15,704,772...15,706,969
Ensembl chr14:15,704,758...15,706,975
JBrowse link
G Cxcl11 C-X-C motif chemokine ligand 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:15,689,432...15,692,207
Ensembl chr14:15,689,424...15,692,271
JBrowse link
G Cxcl13 C-X-C motif chemokine ligand 13 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:13,608,894...13,613,965
Ensembl chr14:13,608,902...13,613,933
JBrowse link
G Cxcl16 C-X-C motif chemokine ligand 16 involved_in ISO (MGI:1891794|PMID:11017100) RGD PMID:11017100 MGI:1891794 NCBI chr10:55,166,721...55,171,316
Ensembl chr10:55,166,723...55,171,592
JBrowse link
G Cxcl2 C-X-C motif chemokine ligand 2 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:16239643 PMID:21873635 RGD:5135237, RGD:13792537 NCBI chr14:17,181,030...17,183,075
Ensembl chr14:17,181,062...17,183,075
JBrowse link
G Cxcl3 C-X-C motif chemokine ligand 3 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:10738946 PMID:21873635 RGD:5135239, RGD:13792537 NCBI chr14:17,270,146...17,289,458
Ensembl chr14:17,270,146...17,289,511
JBrowse link
G Cxcl6 C-X-C motif chemokine ligand 6 involved_in IEP
IBA
ISO
IEA
PMID:21873635
(PMID:8399143)
GO_REF:0000107
RGD
Ensembl
PMID:8399143 PMID:15778492 PMID:21873635 GO_REF:0000107, RGD:5135262, RGD:13792537 NCBI chr14:17,310,089...17,312,303
Ensembl chr14:17,310,426...17,313,093
JBrowse link
G Cxcl9 C-X-C motif chemokine ligand 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:15,722,868...15,727,779
Ensembl chr14:15,722,908...15,728,435
JBrowse link
G Cyp11a1 cytochrome P450, family 11, subfamily a, polypeptide 1 IEP RGD PMID:20665543 RGD:4145535 NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338
JBrowse link
G Cyp17a1 cytochrome P450, family 17, subfamily a, polypeptide 1 IEP RGD PMID:20665543 RGD:4145535 NCBI chr 1:245,535,462...245,543,148
Ensembl chr 1:245,535,462...245,541,573
JBrowse link
G Dab2ip DAB2 interacting protein involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:4453088|PMID:19948740)
GO_REF:0000107
(PMID:19948740)
UniProt
RGD
Ensembl
PMID:19948740 GO_REF:0000024 GO_REF:0000107 MGI:4453088 NCBI chr 3:18,915,290...19,086,282
Ensembl chr 3:18,915,290...19,086,280
JBrowse link
G Defa10 defensin alpha 10 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:94880|MGI:94882|MGI:99582 (MGI:3698376|PMID:11248802)
RGD PMID:11248802 PMID:21873635 MGI:3698376, RGD:13792537 NCBI chr16:70,514,248...70,515,024
Ensembl chr16:70,514,248...70,515,024
JBrowse link
G Defa11 defensin alpha 11 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,533,436...70,535,646
Ensembl chr16:70,533,436...70,535,604
JBrowse link
G Defa24 defensin alpha 24 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,349,550...70,350,582
Ensembl chr16:70,349,567...70,350,603
JBrowse link
G Defa5 defensin alpha 5 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,342,530...70,344,836
Ensembl chr16:70,342,530...70,344,836
JBrowse link
G Defa6 defensin alpha 6 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:94880|MGI:94882|MGI:94883 (MGI:3698376|PMID:11248802)
RGD PMID:11248802 PMID:21873635 MGI:3698376, RGD:13792537 NCBI chr16:70,405,268...70,406,142
Ensembl chr16:70,405,268...70,406,142
JBrowse link
G Defa8 defensin alpha 8 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,433,166...70,434,059
Ensembl chr16:70,433,166...70,434,059
JBrowse link
G Defa9 defensin alpha 9 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,481,813...70,482,803
Ensembl chr16:70,481,821...70,482,717
JBrowse link
G Defal1 defensin alpha-like 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,371,518...70,372,353
Ensembl chr16:70,371,518...70,372,353
JBrowse link
G Ednrb endothelin receptor type B IEP RGD PMID:18091567 RGD:4892289 NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115
JBrowse link
G Efnb2 ephrin B2 IEP RGD PMID:33794069 RGD:127285659 NCBI chr16:80,783,389...80,827,420
Ensembl chr16:80,783,417...80,824,391
JBrowse link
G Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 IEP RGD PMID:23990338 RGD:9685490 NCBI chr 1:239,425,515...239,552,323
Ensembl chr 1:239,425,430...239,552,317
JBrowse link
G Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 IEP RGD PMID:23990338 RGD:9685490 NCBI chr 3:8,213,575...8,219,094
Ensembl chr 3:8,213,663...8,226,866
JBrowse link
G Epas1 endothelial PAS domain protein 1 IEP RGD PMID:12099714 RGD:11041576 NCBI chr 6:7,790,236...7,871,246
Ensembl chr 6:7,790,647...7,871,228
JBrowse link
G Ephb2 Eph receptor B2 IEP RGD PMID:33794069 RGD:127285659 NCBI chr 5:148,889,574...149,077,027
Ensembl chr 5:148,897,246...149,077,059
JBrowse link
G Fcar Fc fragment of IgA receptor involved_in ISO (PMID:25339672) RGD PMID:25339672 NCBI chr 1:69,626,458...69,660,558 JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb IEP RGD PMID:19106808 RGD:5147925 NCBI chr13:83,191,253...83,207,776
Ensembl chr13:83,193,163...83,207,778
JBrowse link
G Fcgr3a Fc fragment of IgG receptor IIIa IDA RGD PMID:19106808 RGD:5147925 NCBI chr13:83,249,905...83,259,921
Ensembl chr13:83,249,872...83,259,921
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 IEP RGD PMID:30250515 RGD:25330356 NCBI chr16:66,492,445...66,546,731
Ensembl chr16:66,494,042...66,547,350
JBrowse link
G Fn1 fibronectin 1 IEP RGD PMID:11819312 RGD:7205475 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
JBrowse link
G Fubp1 far upstream element binding protein 1 IEP RGD PMID:23797733 RGD:13673879 NCBI chr 2:241,159,481...241,186,591
Ensembl chr 2:241,159,512...241,186,602
JBrowse link
G Gata1 GATA binding protein 1 IDA RGD PMID:17687519 RGD:5131526 NCBI chr  X:14,529,706...14,537,530
Ensembl chr  X:14,529,702...14,537,530
JBrowse link
G Gbp2 guanylate binding protein 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:4412460|PMID:18025219)
Ensembl
RGD
PMID:18025219 GO_REF:0000107 MGI:4412460 NCBI chr 2:231,332,488...231,348,573
Ensembl chr 2:231,332,284...231,348,571
JBrowse link
G Gfer growth factor, augmenter of liver regeneration IEP RGD PMID:23073658 RGD:9685733 NCBI chr10:13,718,489...13,721,782
Ensembl chr10:13,718,489...13,720,869
JBrowse link
G Gfi1 growth factor independent 1 transcriptional repressor involved_in
acts_upstream_of_or_within
ISO (PMID:20547752) RGD PMID:20547752 NCBI chr14:2,040,576...2,056,874
Ensembl chr14:2,042,434...2,051,814
JBrowse link
G Ghsr growth hormone secretagogue receptor IEP RGD PMID:15155262 RGD:12905047 NCBI chr 2:110,268,489...110,271,865
Ensembl chr 2:110,268,489...110,271,865
JBrowse link
G Git1 GIT ArfGAP 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:6478067|PMID:32460388)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:32460388 GO_REF:0000024 GO_REF:0000107 MGI:6478067 NCBI chr10:62,342,082...62,356,379
Ensembl chr10:62,342,299...62,356,373
JBrowse link
G Grk6 G protein-coupled receptor kinase 6 IEP RGD PMID:23359120 RGD:13792782 NCBI chr17:9,177,018...9,192,644
Ensembl chr17:9,177,019...9,192,644
JBrowse link
G Gstp1 glutathione S-transferase pi 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:5009411|PMID:16023107)
BHF-UCL
RGD
PMID:16023107 GO_REF:0000024 MGI:5009411 NCBI chr 1:201,337,762...201,340,230
Ensembl chr 1:201,321,672...201,340,226
JBrowse link
G Hamp hepcidin antimicrobial peptide IEP RGD PMID:23506423 RGD:11041627 NCBI chr 1:86,170,926...86,172,865
Ensembl chr 1:86,170,901...86,172,891
JBrowse link
G Havcr2 hepatitis A virus cellular receptor 2 involved_in ISO (MGI:5705210|PMID:25337993) RGD PMID:25337993 MGI:5705210 NCBI chr10:30,882,484...30,914,018
Ensembl chr10:30,882,606...30,909,137
JBrowse link
G Hdac5 histone deacetylase 5 IEP RGD PMID:22933299 RGD:9590257 NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
JBrowse link
G Hif1a hypoxia inducible factor 1 subunit alpha IEP RGD PMID:19940979 RGD:5147884 NCBI chr 6:92,624,059...92,669,262
Ensembl chr 6:92,624,390...92,669,261
JBrowse link
G Hmgb1 high mobility group box 1 involved_in ISO (MGI:6244743|PMID:28096568) RGD PMID:28096568 MGI:6244743 NCBI chr12:5,973,062...5,978,565 JBrowse link
G Hmgb2 high mobility group box 2 involved_in ISO (PMID:19811285) RGD PMID:19811285 NCBI chr16:32,710,651...32,713,230
Ensembl chr16:32,710,658...32,713,140
JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEP RGD PMID:11578593 RGD:1599044 NCBI chr 2:185,875,609...185,903,505
Ensembl chr 2:185,875,616...185,902,130
JBrowse link
G Hnrnpm heterogeneous nuclear ribonucleoprotein M IEP RGD PMID:14597422 RGD:10054261 NCBI chr 7:14,438,703...14,476,781
Ensembl chr 7:14,438,688...14,476,762
JBrowse link
G Hsf1 heat shock transcription factor 1 IEP RGD PMID:21540803 RGD:10402943 NCBI chr 7:108,196,040...108,223,011
Ensembl chr 7:108,196,056...108,223,011
JBrowse link
G Icam1 intercellular adhesion molecule 1 IEP RGD PMID:20674665 RGD:4145373 NCBI chr 8:19,553,063...19,565,438
Ensembl chr 8:19,553,645...19,565,438
JBrowse link
G Ifng interferon gamma acts_upstream_of_or_within ISO (MGI:3821815|PMID:18791161) RGD PMID:18791161 MGI:3821815 NCBI chr 7:53,903,339...53,907,375
Ensembl chr 7:53,903,337...53,907,375
JBrowse link
G Il10 interleukin 10 involved_in
acts_upstream_of_or_within
ISO (PMID:23071313)
(MGI:3828894|PMID:19047410), (MGI:5013871|PMID:21609717)
RGD PMID:19047410 PMID:21609717 PMID:23071313 MGI:3828894 MGI:5013871 NCBI chr13:42,472,625...42,477,308
Ensembl chr13:42,472,839...42,477,313
JBrowse link
G Il12a interleukin 12A acts_upstream_of_or_within ISO (MGI:3828894|PMID:19047410) RGD PMID:19047410 MGI:3828894 NCBI chr 2:152,965,769...152,973,035
Ensembl chr 2:152,965,769...152,972,734
JBrowse link
G Il12b interleukin 12B acts_upstream_of_or_within ISO (MGI:4412460|PMID:18025219), (MGI:5013875|PMID:21606371) RGD PMID:18025219 PMID:21606371 MGI:4412460 MGI:5013875 NCBI chr10:28,888,832...28,903,796
Ensembl chr10:28,893,008...28,902,903
JBrowse link
G Il18 interleukin 18 IEP RGD PMID:11739527 RGD:729357 NCBI chr 8:50,904,630...50,932,887
Ensembl chr 8:50,906,960...50,932,887
JBrowse link
G Il1a interleukin 1 alpha involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:116,526,601...116,537,055
Ensembl chr 3:116,526,604...116,536,822
JBrowse link
G Il1b interleukin 1 beta involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:23200736 PMID:21873635 RGD:7175528, RGD:13792537 NCBI chr 3:116,577,005...116,583,386
Ensembl chr 3:116,577,010...116,583,415
JBrowse link
G Il1f10 interleukin 1 family member 10 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:7,072,511...7,075,439
Ensembl chr 3:7,072,511...7,075,439
JBrowse link
G Il24 interleukin 24 IEP RGD PMID:12182458 RGD:5147432 NCBI chr13:42,353,089...42,358,487
Ensembl chr13:42,353,090...42,358,487
JBrowse link
G Il36a interleukin 36, alpha involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:6,996,851...7,001,400
Ensembl chr 3:6,996,851...7,001,400
JBrowse link
G Il36b interleukin 36, beta involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:7,024,862...7,122,489
Ensembl chr 3:7,021,973...7,031,619
JBrowse link
G Il36g interleukin 36, gamma involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:6,948,323...6,954,485
Ensembl chr 3:6,948,297...6,954,480
JBrowse link
G Il36rn interleukin 36 receptor antagonist involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:7,044,419...7,051,016
Ensembl chr 3:7,044,406...7,051,016
JBrowse link
G Il6 interleukin 6 acts_upstream_of_or_within IEP
ISO
(PMID:23776175)
(MGI:3828894|PMID:19047410), (MGI:5013875|PMID:21606371), (MGI:5543352|PMID:23610142)
RGD PMID:19047410 PMID:21606371 PMID:23610142 PMID:23776175 PMID:2789217 MGI:3828894 MGI:5013875 MGI:5543352, RGD:11049548 NCBI chr 4:5,214,602...5,219,178
Ensembl chr 4:5,213,394...5,219,178
JBrowse link
G Irak1 interleukin-1 receptor-associated kinase 1 involved_in IEP
IBA
PMID:21873635 RGD
GO_Central
PMID:15793310 PMID:21873635 RGD:1579809, RGD:13792537 NCBI chr  X:151,768,621...151,778,521
Ensembl chr  X:151,768,777...151,778,521
JBrowse link
G Irf3 interferon regulatory factor 3 acts_upstream_of_or_within ISO (MGI:5013875|PMID:21606371) RGD PMID:21606371 MGI:5013875 NCBI chr 1:95,479,966...95,484,926
Ensembl chr 1:95,479,821...95,484,935
JBrowse link
G Irf8 interferon regulatory factor 8 acts_upstream_of_or_within ISO MGI:1926332 (MGI:3653161|PMID:9348310) RGD PMID:9348310 MGI:3653161 NCBI chr19:48,790,483...48,812,363
Ensembl chr19:48,790,588...48,811,829
JBrowse link
G Irgm immunity-related GTPase M involved_in ISO (PMID:25891078) RGD PMID:25891078 NCBI chr10:33,233,513...33,241,594
Ensembl chr10:33,233,455...33,241,578
JBrowse link
G Jak2 Janus kinase 2 acts_upstream_of_or_within ISO (MGI:5013875|PMID:21606371) RGD PMID:21606371 MGI:5013875 NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit involved_in ISO (PMID:25110868) RGD PMID:25110868 NCBI chr 5:109,894,175...109,897,268
Ensembl chr 5:109,893,145...109,897,656
JBrowse link
G Klrk1 killer cell lectin like receptor K1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3028810|PMID:14764662)
Ensembl
RGD
PMID:14764662 GO_REF:0000107 MGI:3028810 NCBI chr 4:163,079,887...163,092,434
Ensembl chr 4:163,081,927...163,092,459
JBrowse link
G Kmo kynurenine 3-monooxygenase IEP RGD PMID:26524415 RGD:13703043 NCBI chr13:87,557,080...87,589,334
Ensembl chr13:87,557,286...87,588,881
JBrowse link
G Lbp lipopolysaccharide binding protein involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:12594207)
(PMID:24120359)
(MGI:5645195|PMID:24380872)
UniProt
RGD
PMID:12594207 PMID:24120359 PMID:24380872 GO_REF:0000024 MGI:5645195 NCBI chr 3:146,953,889...146,981,032
Ensembl chr 3:146,954,015...146,981,586
JBrowse link
G Lcn2 lipocalin 2 IEP RGD PMID:19329498 RGD:2316495 NCBI chr 3:15,680,688...15,684,033
Ensembl chr 3:15,680,687...15,684,095
JBrowse link
G Ldoc1 LDOC1, regulator of NFKB signaling involved_in ISO
IEA
(PMID:27812135)
GO_REF:0000107
RGD
Ensembl
PMID:27812135 GO_REF:0000107 NCBI chr  X:139,965,511...140,074,355
Ensembl chr  X:139,965,509...140,074,355
JBrowse link
G Lilrb2 leukocyte immunoglobulin like receptor B2 involved_in ISO (PMID:14971032) RGD PMID:14971032 NCBI chr 1:65,326,832...65,334,683
Ensembl chr 1:65,326,832...65,334,679
JBrowse link
G Litaf lipopolysaccharide-induced TNF factor acts_upstream_of_or_within ISO MGI:3687962 (MGI:3687609|PMID:16954198) RGD PMID:16954198 MGI:3687609 NCBI chr10:4,656,308...4,692,981
Ensembl chr10:4,625,552...4,692,763
JBrowse link
G Ltc4s leukotriene C4 synthase IEP RGD PMID:9794912 RGD:2316634 NCBI chr10:34,560,476...34,562,790
Ensembl chr10:34,560,360...34,562,651
JBrowse link
G Ly96 lymphocyte antigen 96 involved_in ISO (MGI:5645195|PMID:24380872) RGD PMID:24380872 MGI:5645195 NCBI chr 5:2,582,233...2,612,357
Ensembl chr 5:2,582,254...2,612,386
JBrowse link
G Malt1 MALT1 paracaspase acts_upstream_of_or_within ISO (PMID:16831874) RGD PMID:16831874 NCBI chr18:58,942,282...58,996,318
Ensembl chr18:58,942,299...58,994,260
JBrowse link
G Map2k3 mitogen activated protein kinase kinase 3 IDA RGD PMID:14670949 RGD:7495812 NCBI chr10:45,608,145...45,629,492
Ensembl chr10:45,607,163...45,629,492
JBrowse link
G Map2k7 mitogen activated protein kinase kinase 7 involved_in ISO (MGI:1101248|PMID:9405446) RGD PMID:9405446 MGI:1101248 NCBI chr12:2,591,312...2,604,211
Ensembl chr12:2,591,219...2,604,222
JBrowse link
G Mapk14 mitogen activated protein kinase 14 acts_upstream_of_or_within ISO (PMID:23776175) RGD PMID:23776175 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:23776175)
GO_REF:0000107
RGD
Ensembl
PMID:23776175 GO_REF:0000107 NCBI chr16:8,638,897...8,721,960
Ensembl chr16:8,638,924...8,721,981
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 IEP RGD PMID:9475517 RGD:2304245 NCBI chr10:34,169,661...34,211,138
Ensembl chr10:34,169,675...34,210,178
JBrowse link
G Mef2c myocyte enhancer factor 2C involved_in ISS
ISO
GO_REF:0000024
(MGI:3829850|PMID:18955699)
UniProt
RGD
PMID:18955699 GO_REF:0000024 MGI:3829850 NCBI chr 2:13,973,299...14,136,065
Ensembl chr 2:13,993,438...14,132,880
JBrowse link
G Mir107 microRNA 107 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 1:232,337,767...232,337,853
Ensembl chr 1:232,337,767...232,337,853
JBrowse link
G Mir10a microRNA 10a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr10:81,283,171...81,283,280
Ensembl chr10:81,283,171...81,283,280
JBrowse link
G Mir125a microRNA 125a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 1:58,677,626...58,677,710
Ensembl chr 1:58,677,626...58,677,710
JBrowse link
G Mir139 microRNA 139 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 1:155,878,828...155,878,895
Ensembl chr 1:155,878,825...155,878,902
JBrowse link
G Mir140 microRNA 140 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr19:35,465,577...35,465,675
Ensembl chr19:35,465,577...35,465,675
JBrowse link
G Mir142 microRNA 142 acts_upstream_of_or_within ISO (MGI:5013506|PMID:21536037) RGD PMID:21536037 MGI:5013506 NCBI chr10:72,557,864...72,557,950
Ensembl chr10:72,557,857...72,557,967
JBrowse link
G Mir146a microRNA 146a acts_upstream_of_or_within ISO (MGI:3821815|PMID:18791161), (MGI:5050043|PMID:21247879) RGD PMID:18791161 PMID:21247879 MGI:3821815 MGI:5050043 NCBI chr10:27,848,516...27,848,610
Ensembl chr10:27,848,516...27,848,610
JBrowse link
G Mir146b microRNA 146b acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 1:245,203,438...245,203,525
Ensembl chr 1:245,203,438...245,203,525
JBrowse link
G Mir147 microRNA 147 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 3:109,722,692...109,722,770
Ensembl chr 3:109,722,692...109,722,770
JBrowse link
G Mir150 microRNA 150 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) RGD PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr 1:95,605,024...95,605,108
Ensembl chr 1:95,605,024...95,605,108
JBrowse link
G Mir155 microRNA 155 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) RGD PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr11:23,774,654...23,774,718
Ensembl chr11:23,774,654...23,774,718
JBrowse link
G Mir16 microRNA 16 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 2:153,245,349...153,245,443
Ensembl chr 2:153,245,349...153,245,443
JBrowse link
G Mir181a2 microRNA 181a-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 3:22,615,845...22,615,961
Ensembl chr 3:22,615,845...22,615,961
JBrowse link
G Mir181b2 microRNA 181b-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 3:22,616,948...22,617,035
Ensembl chr 3:22,616,948...22,617,035
JBrowse link
G Mir181c microRNA 181c acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) RGD PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr19:23,983,523...23,983,628
Ensembl chr19:23,983,523...23,983,628
JBrowse link
G Mir184 microRNA 184 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 8:90,343,134...90,343,210
Ensembl chr 8:90,343,134...90,343,210
JBrowse link
G Mir193a microRNA 193a acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr10:64,672,343...64,672,454
Ensembl chr10:64,672,343...64,672,454
JBrowse link
G Mir194-1 microRNA 194-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr13:96,851,166...96,851,248
Ensembl chr13:96,851,166...96,851,248
JBrowse link
G Mir194-2 microRNA 194-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 1:203,564,761...203,564,845
Ensembl chr 1:203,564,761...203,564,845
JBrowse link
G Mir199a2 microRNA 199a-2 acts_upstream_of_or_within ISO MGI:2676863 (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr13:74,582,954...74,583,063
Ensembl chr13:74,582,954...74,583,063
JBrowse link
G Mir200c microRNA 200c acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 4:157,523,679...157,523,747 JBrowse link
G Mir202 microRNA 202 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 1:194,754,730...194,754,801
Ensembl chr 1:194,754,730...194,754,801
JBrowse link
G Mir205 microRNA 205 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr13:105,035,878...105,035,985
Ensembl chr13:105,035,878...105,035,985
JBrowse link
G Mir21 microRNA 21 IEP RGD PMID:30542412 RGD:41410885 NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
JBrowse link
G Mir210 microRNA 210 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 1:196,326,343...196,326,452 JBrowse link
G Mir217 microRNA 217 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr14:102,531,505...102,531,609
Ensembl chr14:102,531,505...102,531,609
JBrowse link
G Mir223 microRNA 223 acts_upstream_of_or_within IEP
ISO
(MGI:3817382|PMID:18762567), (MGI:3821815|PMID:18791161), (MGI:5050043|PMID:21247879) RGD PMID:18762567 PMID:18791161 PMID:21247879 PMID:29707878 MGI:3817382 MGI:3821815 MGI:5050043, RGD:25823197 NCBI chr  X:61,141,887...61,141,996
Ensembl chr  X:61,141,887...61,141,996
JBrowse link
G Mir224 microRNA 224 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) RGD PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr  X:150,065,088...150,065,169
Ensembl chr  X:150,065,088...150,065,169
JBrowse link
G Mir23b microRNA 23b acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr17:1,813,667...1,813,763
Ensembl chr17:1,813,667...1,813,763
JBrowse link
G Mir24-2 microRNA 24-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr19:23,954,683...23,954,790
Ensembl chr19:23,954,683...23,954,790
JBrowse link
G Mir26a microRNA 26a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 8:118,755,289...118,755,378
Ensembl chr 8:118,755,289...118,755,378
JBrowse link
G Mir26b microRNA 26b acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 9:75,976,596...75,976,680
Ensembl chr 9:75,976,596...75,976,680
JBrowse link
G Mir27a microRNA 27a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr19:23,954,831...23,954,917
Ensembl chr19:23,954,831...23,954,917
JBrowse link
G Mir29a microRNA 29a acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 4:59,650,608...59,650,695 JBrowse link
G Mir29b1 microRNA 29b-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 4:59,650,987...59,651,067
Ensembl chr 4:59,650,986...59,651,067
JBrowse link
G Mir29b2 microRNA 29b-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr13:106,570,371...106,570,451
Ensembl chr13:106,570,367...106,570,456
JBrowse link
G Mir30b microRNA 30b acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 7:100,132,589...100,132,675
Ensembl chr 7:100,132,589...100,132,675
JBrowse link
G Mir30c1 microRNA 30c-1 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 5:134,349,237...134,349,325
Ensembl chr 5:134,349,237...134,349,325
JBrowse link
G Mir30c2 microRNA 30c-2 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 9:25,757,342...25,757,425
Ensembl chr 9:25,757,342...25,757,425
JBrowse link
G Mir30d microRNA 30d acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 7:100,136,391...100,136,472
Ensembl chr 7:100,136,391...100,136,472
JBrowse link
G Mir323 microRNA 323 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:128,725,539...128,725,624
Ensembl chr 6:128,725,539...128,725,624
JBrowse link
G Mir342 microRNA 342 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567), (MGI:5050043|PMID:21247879) RGD PMID:18762567 PMID:21247879 MGI:3817382 MGI:5050043 NCBI chr 6:127,565,269...127,565,367
Ensembl chr 6:127,565,269...127,565,367
JBrowse link
G Mir345 microRNA 345 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:127,754,027...127,754,122
Ensembl chr 6:127,754,027...127,754,122
JBrowse link
G Mir381 microRNA 381 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:128,740,976...128,741,036 JBrowse link
G Mir383 microRNA 383 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr16:54,040,340...54,040,413
Ensembl chr16:54,040,340...54,040,413
JBrowse link
G Mir409 microRNA 409 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:128,757,780...128,757,856 JBrowse link
G Mir425 microRNA 425 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 8:109,264,555...109,264,637
Ensembl chr 8:109,264,555...109,264,637
JBrowse link
G Mir431 microRNA 431 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:128,544,210...128,544,323
Ensembl chr 6:128,544,210...128,544,323
JBrowse link
G Mir433 microRNA 433 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:128,545,119...128,545,211
Ensembl chr 6:128,545,112...128,545,217
JBrowse link
G Mir484 microRNA 484 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr10:887,684...887,760 JBrowse link
G Mir486 microRNA 486 acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382
G Mir494 microRNA 494 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 6:128,728,710...128,728,792
Ensembl chr 6:128,728,709...128,728,793
JBrowse link
G Mir500 microRNA 500 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr  X:15,258,778...15,258,857
Ensembl chr  X:15,258,768...15,258,859
JBrowse link
G Mir598 microRNA 598 acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr15:37,962,692...37,962,770 JBrowse link
G Mir7-1 microRNA 7-1 acts_upstream_of_or_within ISO MGI:3619437 (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr17:6,273,264...6,273,360
Ensembl chr17:6,273,264...6,273,360
JBrowse link
G Mir7b microRNA 7b acts_upstream_of_or_within ISO (MGI:5050043|PMID:21247879) RGD PMID:21247879 MGI:5050043 NCBI chr 9:1,080,274...1,080,383
Ensembl chr 9:1,080,274...1,080,383
JBrowse link
G Mir98 microRNA 98 acts_upstream_of_or_within ISO (MGI:5013871|PMID:21609717) RGD PMID:21609717 MGI:5013871 NCBI chr  X:20,981,235...20,981,342
Ensembl chr  X:20,981,235...20,981,342
JBrowse link
G Mirlet7g microRNA let-7g acts_upstream_of_or_within ISO (MGI:3817382|PMID:18762567) RGD PMID:18762567 MGI:3817382 NCBI chr 8:106,822,293...106,822,380
Ensembl chr 8:106,822,280...106,822,388
JBrowse link
G Mmp1 matrix metallopeptidase 1 IEP RGD PMID:21683124 RGD:7207286 NCBI chr 8:4,658,588...4,679,099
Ensembl chr 8:4,658,588...4,679,097
JBrowse link
G Mmp9 matrix metallopeptidase 9 IEP RGD PMID:21683124 RGD:7207286 NCBI chr 3:153,684,158...153,692,118
Ensembl chr 3:153,683,858...153,692,120
JBrowse link
G Mrc1 mannose receptor, C type 1 acts_upstream_of_or_within ISO (MGI:5486412|PMID:22832163) RGD PMID:22832163 MGI:5486412 NCBI chr17:77,249,187...77,330,857
Ensembl chr17:77,249,187...77,330,857
JBrowse link
G Myd88 MYD88, innate immune signal transduction adaptor involved_in ISO (MGI:6355543|PMID:17660297) RGD PMID:17660297 MGI:6355543 NCBI chr 8:119,074,439...119,078,508
Ensembl chr 8:119,074,437...119,079,415
JBrowse link
G Ncl nucleolin IMP RGD PMID:21309751 RGD:9686449 NCBI chr 9:86,999,588...87,008,112
Ensembl chr 9:86,998,019...87,008,136
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 involved_in
acts_upstream_of_or_within
IDA
IEA
ISO
GO_REF:0000107
(PMID:23776175)
Ensembl
RGD
PMID:23776175 PMID:16842873 GO_REF:0000107, RGD:10045666 NCBI chr 2:224,016,214...224,132,135
Ensembl chr 2:224,016,214...224,110,404
JBrowse link
G Nfkbib NFKB inhibitor beta involved_in
acts_upstream_of_or_within
IBA
ISO
IEA
PMID:21873635
(MGI:4437182|PMID:20060382)
GO_REF:0000107
RGD
Ensembl
PMID:20060382 PMID:21873635 GO_REF:0000107 MGI:4437182, RGD:13792537 NCBI chr 1:84,046,292...84,053,862
Ensembl chr 1:84,046,295...84,053,862
JBrowse link
G Nfkbil1 NFKB inhibitor like 1 involved_in ISO
ISS
(PMID:20829348)
GO_REF:0000024
RGD
UniProt
PMID:20829348 GO_REF:0000024 NCBI chr20:3,589,974...3,608,348
Ensembl chr20:3,590,642...3,605,616
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 involved_in ISO (PMID:12483741), (PMID:28847925)
(MGI:6095076|PMID:28847925)
RGD PMID:12483741 PMID:28847925 MGI:6095076 NCBI chr10:44,326,770...44,353,814
Ensembl chr10:44,328,566...44,352,811
JBrowse link
G Nod2 nucleotide-binding oligomerization domain containing 2 involved_in ISO (PMID:27812135) RGD PMID:27812135 NCBI chr19:18,379,720...18,422,817
Ensembl chr19:18,382,439...18,417,177
JBrowse link
G Nos2 nitric oxide synthase 2 acts_upstream_of_or_within
involved_in
IEP
ISO
IEA
(MGI:3821815|PMID:18791161), (MGI:4412460|PMID:18025219)
GO_REF:0000107
RGD
Ensembl
PMID:18025219 PMID:18791161 PMID:21975807 GO_REF:0000107 MGI:3821815 MGI:4412460, RGD:5508737 NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210
JBrowse link
G Np4 defensin NP-4 precursor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,494,607...70,497,261
Ensembl chr16:70,342,529...70,497,202
JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:18511497)
Ensembl
RGD
PMID:18511497 GO_REF:0000107 NCBI chr10:83,728,348...83,735,562
Ensembl chr10:83,728,318...83,735,705
JBrowse link
G Nr1h3 nuclear receptor subfamily 1, group H, member 3 involved_in ISO
IEA
(PMID:18511497)
GO_REF:0000107
(MGI:5009771|PMID:21187453)
RGD
Ensembl
PMID:18511497 PMID:21187453 GO_REF:0000107 MGI:5009771 NCBI chr 3:77,158,808...77,168,907
Ensembl chr 3:77,158,808...77,168,722
JBrowse link
G Nr1h4 nuclear receptor subfamily 1, group H, member 4 involved_in ISO (MGI:5707586|PMID:18972444) RGD PMID:18972444 MGI:5707586 NCBI chr 7:23,846,122...23,942,085
Ensembl chr 7:23,846,122...23,942,047
JBrowse link
G Nuggc nuclear GTPase, germinal center associated involved_in ISO (PMID:19734146) RGD PMID:19734146 NCBI chr15:39,821,851...39,866,122
Ensembl chr15:39,821,855...39,866,122
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase IMP RGD PMID:19098112 RGD:9590190 NCBI chr  X:66,771,278...66,816,148
Ensembl chr  X:66,771,349...66,816,146
JBrowse link
G Oprk1 opioid receptor, kappa 1 IEP RGD PMID:9645969 RGD:9831421 NCBI chr 5:13,860,016...13,877,823
Ensembl chr 5:13,860,021...13,877,823
JBrowse link
G P2ry2 purinergic receptor P2Y2 IEP RGD PMID:18689605 RGD:2316659 NCBI chr 1:155,352,050...155,367,423
Ensembl chr 1:155,351,165...155,367,632
JBrowse link
G Pabpn1 poly(A) binding protein, nuclear 1 involved_in ISO (MGI:5795816|PMID:22844456) RGD PMID:22844456 MGI:5795816 NCBI chr15:28,368,100...28,372,712
Ensembl chr15:28,368,100...28,372,703
JBrowse link
G Paf1 PAF1 homolog, Paf1/RNA polymerase II complex component involved_in ISS
ISO
GO_REF:0000024
(MGI:5319608|PMID:17911113)
UniProt
RGD
PMID:17911113 GO_REF:0000024 MGI:5319608 NCBI chr 1:83,683,654...83,689,233
Ensembl chr 1:83,668,813...83,689,237
JBrowse link
G Park7 Parkinsonism associated deglycase IEP RGD PMID:23847046 RGD:13462068 NCBI chr 5:161,353,718...161,376,993
Ensembl chr 5:161,353,719...161,376,970
JBrowse link
G Pdcd1lg2 programmed cell death 1 ligand 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:227,158,941...227,223,938
Ensembl chr 1:227,158,941...227,223,938
JBrowse link
G Pdcd4 programmed cell death 4 involved_in ISO (MGI:4438829|PMID:19946272) RGD PMID:19946272 MGI:4438829 NCBI chr 1:252,921,342...252,944,278
Ensembl chr 1:252,921,392...252,944,275
JBrowse link
G Pde2a phosphodiesterase 2A acts_upstream_of_or_within ISO (PMID:21571906) RGD PMID:21571906 NCBI chr 1:155,823,590...155,915,434
Ensembl chr 1:155,813,180...155,915,434
JBrowse link
G Pde4b phosphodiesterase 4B involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2181444 (MGI:3521611|PMID:15585880)
Ensembl
RGD
PMID:15585880 GO_REF:0000107 MGI:3521611 NCBI chr 5:116,799,827...117,367,707
Ensembl chr 5:116,799,971...117,367,696
JBrowse link
G Pde4d phosphodiesterase 4D acts_upstream_of_or_within ISO MGI:2451168|MGI:3525068 (MGI:3521611|PMID:15585880) RGD PMID:15585880 MGI:3521611 NCBI chr 2:40,014,933...41,529,190
Ensembl chr 2:40,019,933...41,525,884
JBrowse link
G Pf4 platelet factor 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:17,298,438...17,299,148
Ensembl chr14:17,298,308...17,299,365
JBrowse link
G Plaa phospholipase A2, activating protein involved_in ISO
ISS
(PMID:28007986)
GO_REF:0000024
RGD
UniProt
PMID:28007986 GO_REF:0000024 NCBI chr 5:109,428,600...109,460,373
Ensembl chr 5:109,428,265...109,460,282
JBrowse link
G Plau plasminogen activator, urokinase IEP RGD PMID:19184369 RGD:7241806 NCBI chr15:3,456,230...3,462,732
Ensembl chr15:3,456,232...3,462,775
JBrowse link
G Plscr1 phospholipid scramblase 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(PMID:17590392)
Ensembl
RGD
PMID:17590392 GO_REF:0000107 NCBI chr 8:92,784,279...92,804,698
Ensembl chr 8:92,784,356...92,804,692
JBrowse link
G Plscr2 phospholipid scramblase 2 acts_upstream_of_or_within ISO (PMID:17590392) RGD PMID:17590392 NCBI chr 8:92,809,422...92,845,947
Ensembl chr 8:92,808,398...92,845,932
JBrowse link
G Plscr3 phospholipid scramblase 3 acts_upstream_of_or_within ISO (PMID:17590392) RGD PMID:17590392 NCBI chr10:54,566,556...54,573,240
Ensembl chr10:54,566,873...54,578,709
JBrowse link
G Plscr4 phospholipid scramblase 4 acts_upstream_of_or_within ISO (PMID:17590392) RGD PMID:17590392 NCBI chr 8:92,987,290...93,026,056
Ensembl chr 8:92,987,381...93,026,049
JBrowse link
G Ppard peroxisome proliferator-activated receptor delta IDA RGD PMID:15728586 RGD:1580656 NCBI chr20:6,298,785...6,363,970
Ensembl chr20:6,298,785...6,363,968
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha IEP RGD PMID:19853624 RGD:10059687 NCBI chr14:58,860,752...59,516,525
Ensembl chr14:58,861,144...59,512,656
JBrowse link
G Ppbp pro-platelet basic protein involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr14:17,302,326...17,303,130
Ensembl chr14:17,302,326...17,303,130
JBrowse link
G Prpf8 pre-mRNA processing factor 8 IDA RGD PMID:1345341 RGD:10045884 NCBI chr10:60,331,494...60,354,606
Ensembl chr10:60,331,494...60,354,606
JBrowse link
G Ptger3 prostaglandin E receptor 3 IEP RGD PMID:14636300 RGD:10043359 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
G Pycard PYD and CARD domain containing involved_in ISO (PMID:12486103) RGD PMID:12486103 NCBI chr 1:182,601,657...182,603,013
Ensembl chr 1:182,601,174...182,602,955
JBrowse link
G Rara retinoic acid receptor, alpha involved_in ISO (MGI:4411947|PMID:19752193) RGD PMID:19752193 MGI:4411947 NCBI chr10:83,883,490...83,928,932
Ensembl chr10:83,893,384...83,928,142
JBrowse link
G RatNP-3b defensin RatNP-3 precursor involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:70,544,364...70,546,533
Ensembl chr16:70,513,888...70,546,522
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit acts_upstream_of_or_within
involved_in
IEP
ISO
IDA
(PMID:20547752)
(PMID:25762865)
RGD PMID:20547752 PMID:25762865 PMID:9918814 PMID:15728586 RGD:2298880, RGD:1580656 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G Rhoa ras homolog family member A involved_in ISO (PMID:19734146) RGD PMID:19734146 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2446070|MGI:2660793 (MGI:2176422|PMID:11894098), (MGI:2176424|PMID:11894097) RGD PMID:11894097 PMID:11894098 MGI:2176422 MGI:2176424 NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
JBrowse link
G Sbno2 strawberry notch homolog 2 involved_in ISO (MGI:5660440|PMID:25903009) RGD PMID:25903009 MGI:5660440 NCBI chr 7:9,605,572...9,649,529
Ensembl chr 7:9,605,627...9,649,527
JBrowse link
G Selenos selenoprotein S involved_in ISO
IEA
(PMID:18675776)
GO_REF:0000107
RGD
Ensembl
PMID:18675776 GO_REF:0000107 NCBI chr 1:119,659,779...119,669,546
Ensembl chr 1:119,659,751...119,669,833
JBrowse link
G Serpine1 serpin family E member 1 involved_in IEP
ISO
IEA
(PMID:19916862)
GO_REF:0000107
RGD
Ensembl
PMID:19916862 PMID:20060032 GO_REF:0000107, RGD:13208812 NCBI chr12:19,601,272...19,611,657
Ensembl chr12:19,601,272...19,611,657
JBrowse link
G Sgms1 sphingomyelin synthase 1 IEP RGD PMID:12353928 RGD:1302423 NCBI chr 1:229,996,673...230,259,591
Ensembl chr 1:229,998,119...230,259,603
JBrowse link
G Shpk sedoheptulokinase involved_in ISO
IBA
(PMID:22682222)
(MGI:5428058|PMID:22682222)
PMID:21873635
RGD PMID:22682222 PMID:21873635 MGI:5428058, RGD:13792537 NCBI chr10:57,817,551...57,841,981
Ensembl chr10:57,817,629...57,841,980
JBrowse link
G Sirpa signal-regulatory protein alpha involved_in IEA
ISO
GO_REF:0000107
(MGI:3760575|PMID:17954568)
Ensembl
RGD
PMID:17954568 GO_REF:0000107 MGI:3760575 NCBI chr 3:116,819,730...116,858,099
Ensembl chr 3:116,819,726...116,858,098
JBrowse link
G Smr3b submaxillary gland androgen regulated protein 3B involved_in IDA PMID:9321881 UniProt PMID:9321881 RGD:8553737 NCBI chr14:19,783,815...19,788,557
Ensembl chr14:19,783,816...19,788,492
JBrowse link
G Spon2 spondin 2 acts_upstream_of_or_within ISO MGI:3026870 (MGI:2686801|PMID:14691481) RGD PMID:14691481 MGI:2686801 NCBI chr14:77,505,695...77,518,001
Ensembl chr14:77,511,901...77,517,996
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase IEP RGD PMID:20149623 RGD:2325014 NCBI chr 3:146,091,969...146,139,492
Ensembl chr 3:146,091,841...146,139,476
JBrowse link
G Stap1 signal transducing adaptor family member 1 involved_in ISO (MGI:3831067|PMID:19100238) RGD PMID:19100238 MGI:3831067 NCBI chr14:21,950,466...21,981,395
Ensembl chr14:21,952,496...21,981,245
JBrowse link
G Star steroidogenic acute regulatory protein IEP RGD PMID:20665543 RGD:4145535 NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672
JBrowse link
G Stat1 signal transducer and activator of transcription 1 acts_upstream_of_or_within ISO MGI:1861949 (MGI:5013875|PMID:21606371) RGD PMID:21606371 MGI:5013875 NCBI chr 9:49,419,561...49,459,969 JBrowse link
G Tbxa2r thromboxane A2 receptor IMP RGD PMID:10513923 RGD:11059603 NCBI chr 7:8,383,347...8,390,753
Ensembl chr 7:8,383,378...8,388,176
JBrowse link
G Tfpi tissue factor pathway inhibitor IEP RGD PMID:11816723 RGD:727341 NCBI chr 3:69,533,156...69,582,547
Ensembl chr 3:69,533,156...69,576,880
JBrowse link
G Thpo thrombopoietin IEP RGD PMID:20236022 RGD:11073693 Ensembl chr11:80,182,820...80,188,167 JBrowse link
G Ticam1 toll-like receptor adaptor molecule 1 involved_in ISO (MGI:3718934|PMID:17658277) RGD PMID:17658277 MGI:3718934 NCBI chr 9:1,102,559...1,115,573 JBrowse link
G Ticam2 toll-like receptor adaptor molecule 2 involved_in ISO (PMID:19412184)
(PMID:22685567)
RGD PMID:19412184 PMID:22685567 NCBI chr18:39,289,902...39,311,462
Ensembl chr18:39,294,453...39,311,462
JBrowse link
G Tlr4 toll-like receptor 4 involved_in
acts_upstream_of_or_within
IEP
ISO
(MGI:4421230|PMID:20051628), (MGI:5462034|PMID:21880694), (MGI:6244743|PMID:28096568)
MGI:1860755 (MGI:1860539|PMID:10880523), (MGI:2686801|PMID:14691481), (MGI:5604854|PMID:24740015)
RNAcentral:URS000026261D_9606 (PMID:11432859), (PMID:30321456)
RGD PMID:10880523 PMID:11432859 PMID:14691481 PMID:20051628 PMID:21880694 More... MGI:1860539 MGI:2686801 MGI:4421230 MGI:5462034 MGI:5604854 MGI:6244743, RGD:7777075 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Tlr5 toll-like receptor 5 IEP RGD PMID:21308757 RGD:5129495 NCBI chr13:94,634,778...94,658,992
Ensembl chr13:94,634,801...94,657,738
JBrowse link
G Tlr9 toll-like receptor 9 IEP RGD PMID:21308757 PMID:20655116 RGD:5129495, RGD:5130179 NCBI chr 8:106,864,680...106,868,796
Ensembl chr 8:106,864,680...106,868,796
JBrowse link
G Tnf tumor necrosis factor acts_upstream_of_or_within IEP
ISO
IMP
(MGI:3828894|PMID:19047410), (MGI:4437182|PMID:20060382), (MGI:5013875|PMID:21606371), (MGI:5543352|PMID:23610142) RGD PMID:19047410 PMID:20060382 PMID:21606371 PMID:23610142 PMID:15602748 More... MGI:3828894 MGI:4437182 MGI:5013875 MGI:5543352, RGD:1582142, RGD:14994703, RGD:14995441 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Tnfaip3 TNF alpha induced protein 3 involved_in ISO (PMID:19912257), (PMID:21127049), (PMID:21220427) RGD PMID:19912257 PMID:21127049 PMID:21220427 NCBI chr 1:13,709,211...13,724,291
Ensembl chr 1:13,709,206...13,725,282
JBrowse link
G Tnfrsf1b TNF receptor superfamily member 1B involved_in ISO (PMID:22480688) RGD PMID:22480688 NCBI chr 5:157,070,642...157,104,216
Ensembl chr 5:157,070,642...157,104,206
JBrowse link
G Tnfsf4 TNF superfamily member 4 involved_in ISO (PMID:20844189) RGD PMID:20844189 NCBI chr13:73,723,329...73,746,809
Ensembl chr13:73,723,329...73,746,788
JBrowse link
G Tnip2 TNFAIP3 interacting protein 2 involved_in ISO (MGI:3656197|PMID:16633345) RGD PMID:16633345 MGI:3656197 NCBI chr14:76,228,283...76,246,609
Ensembl chr14:76,228,371...76,275,265
JBrowse link
G Tnip3 TNFAIP3 interacting protein 3 involved_in ISO (PMID:17088249) RGD PMID:17088249 NCBI chr 4:94,867,258...94,908,780 JBrowse link
G Traf6 TNF receptor associated factor 6 acts_upstream_of_or_within ISO (PMID:23776175) RGD PMID:23776175 NCBI chr 3:87,963,517...87,988,316
Ensembl chr 3:87,963,514...87,983,507
JBrowse link
G Trem1 triggering receptor expressed on myeloid cells 1 IEP RGD PMID:26383906 RGD:127284850 NCBI chr 9:12,763,819...12,779,285
Ensembl chr 9:12,763,819...12,779,203
JBrowse link
G Trim41 tripartite motif-containing 41 involved_in ISO (PMID:27812135) RGD PMID:27812135 NCBI chr10:33,175,213...33,186,472
Ensembl chr10:33,175,213...33,186,694
JBrowse link
G Tspo translocator protein IEP RGD PMID:14678758 RGD:2317158 NCBI chr 7:114,720,188...114,730,450
Ensembl chr 7:114,720,188...114,730,450
JBrowse link
G Upf1 UPF1, RNA helicase and ATPase involved_in ISO (PMID:26255671) RGD PMID:26255671 NCBI chr16:19,076,594...19,097,365
Ensembl chr16:19,076,322...19,096,568
JBrowse link
G Vim vimentin involved_in IEA
ISO
ISS
GO_REF:0000107
(PMID:27812135)
GO_REF:0000024
Ensembl
RGD
UniProt
PMID:27812135 GO_REF:0000024 GO_REF:0000107 NCBI chr17:76,668,701...76,677,186
Ensembl chr17:76,668,647...76,677,187
JBrowse link
G Vldlr very low density lipoprotein receptor IEP RGD PMID:16376325 RGD:1625574 NCBI chr 1:224,813,539...224,850,400
Ensembl chr 1:224,814,377...224,845,920
JBrowse link
G Vwf von Willebrand factor IEP RGD PMID:17708840 RGD:11079229 NCBI chr 4:158,360,152...158,491,539
Ensembl chr 4:158,360,152...158,491,539
JBrowse link
G Wnt5a Wnt family member 5A involved_in ISO
IEA
(PMID:18174455)
GO_REF:0000107
RGD
Ensembl
PMID:18174455 GO_REF:0000107 NCBI chr16:3,695,667...3,718,234
Ensembl chr16:3,697,032...3,718,234
JBrowse link
G Xbp1 X-box binding protein 1 involved_in ISS
ISO
IEA
GO_REF:0000024
(MGI:5605956|PMID:12612580)
GO_REF:0000107
(PMID:11460154)
UniProt
RGD
Ensembl
PMID:11460154 PMID:12612580 GO_REF:0000024 GO_REF:0000107 MGI:5605956 NCBI chr14:80,390,629...80,395,713
Ensembl chr14:80,390,643...80,395,693
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISO
ISS
(PMID:18178554), (PMID:19909337), (PMID:22055188), (PMID:25861989)
(MGI:3842851|PMID:19322177), (MGI:5142149|PMID:21616078), (MGI:5706859|PMID:26000482), (MGI:5751631|PMID:26255671)
GO_REF:0000024
RGD
UniProt
PMID:18178554 PMID:19322177 PMID:19909337 PMID:21616078 PMID:22055188 More... GO_REF:0000024 MGI:3842851 MGI:5142149 MGI:5706859 MGI:5751631 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
G Zfp36 zinc finger protein 36 involved_in IEA
ISO
ISS
GO_REF:0000107
(MGI:4457258|PMID:10330172), (MGI:5784995|PMID:11533235), (MGI:5784999|PMID:9703499), (MGI:5795816|PMID:22844456)
GO_REF:0000024
(PMID:14679154), (PMID:14766228), (PMID:15187101)
Ensembl
RGD
UniProt
PMID:9703499 PMID:10330172 PMID:11533235 PMID:14679154 PMID:14766228 More... GO_REF:0000024 GO_REF:0000107 MGI:4457258 MGI:5784995 MGI:5784999 MGI:5795816 NCBI chr 1:83,669,084...83,671,564
Ensembl chr 1:83,669,084...83,671,564
JBrowse link
G Zfp709 zinc finger protein 709 involved_in IDA PMID:17374454 UniProt PMID:17374454 RGD:8553966 NCBI chr16:17,907,599...17,920,047
Ensembl chr16:17,909,641...17,919,700
JBrowse link
cellular response to lipoteichoic acid term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccl20 C-C motif chemokine ligand 20 IEP RGD PMID:15618187 RGD:7483631 NCBI chr 9:84,389,031...84,391,629
Ensembl chr 9:84,388,904...84,391,629
JBrowse link
G Cd14 CD14 molecule acts_upstream_of_or_within ISO (PMID:12594207) RGD PMID:12594207 NCBI chr18:28,335,522...28,337,383
Ensembl chr18:28,335,340...28,337,261
JBrowse link
G Cd36 CD36 molecule acts_upstream_of_or_within ISO MGI:1931790|MGI:2447190|MGI:3573941 (MGI:3528769|PMID:15690042), (MGI:3587138|PMID:16061696) RGD PMID:15690042 PMID:16061696 MGI:3528769 MGI:3587138 NCBI chr 4:17,317,343...17,410,084 JBrowse link
G Defb43 defensin beta 43 involved_in ISO (PMID:26649771) RGD PMID:26649771 NCBI chr15:37,272,008...37,276,626
Ensembl chr15:37,272,008...37,276,626
JBrowse link
G Lbp lipopolysaccharide binding protein acts_upstream_of_or_within
involved_in
ISO
IEA
(PMID:12594207)
GO_REF:0000107
RGD
Ensembl
PMID:12594207 GO_REF:0000107 NCBI chr 3:146,953,889...146,981,032
Ensembl chr 3:146,954,015...146,981,586
JBrowse link
G Mapk14 mitogen activated protein kinase 14 involved_in ISO
IEA
(PMID:26649771)
GO_REF:0000107
RGD
Ensembl
PMID:26649771 GO_REF:0000107 NCBI chr20:6,749,646...6,810,590
Ensembl chr20:6,749,670...6,810,589
JBrowse link
G Rela RELA proto-oncogene, NF-kB subunit involved_in ISO (PMID:26649771) RGD PMID:26649771 NCBI chr 1:202,925,001...202,935,484
Ensembl chr 1:202,924,945...202,935,484
JBrowse link
G Ripk2 receptor-interacting serine-threonine kinase 2 acts_upstream_of_or_within ISO MGI:2660793 (MGI:2176422|PMID:11894098) RGD PMID:11894098 MGI:2176422 NCBI chr 5:29,630,806...29,662,804
Ensembl chr 5:29,631,570...29,662,657
JBrowse link
G Tirap TIR domain containing adaptor protein acts_upstream_of_or_within ISO MGI:3573942 (MGI:3528769|PMID:15690042) RGD PMID:15690042 MGI:3528769 NCBI chr 8:33,531,724...33,548,508
Ensembl chr 8:33,531,725...33,547,432
JBrowse link
G Tlr2 toll-like receptor 2 acts_upstream_of_or_within
involved_in
ISO MGI:2674036 (MGI:3528769|PMID:15690042)
(PMID:12594207)
(PMID:26649771)
RGD PMID:12594207 PMID:15690042 PMID:26649771 MGI:3528769 NCBI chr 2:169,200,620...169,206,819
Ensembl chr 2:169,197,419...169,206,630
JBrowse link
G Tlr4 toll-like receptor 4 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1860885 (MGI:2178646|PMID:10549626)
Ensembl
RGD
PMID:10549626 GO_REF:0000107 MGI:2178646 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Trem2 triggering receptor expressed on myeloid cells 2 involved_in ISO (MGI:5572888|PMID:12847223) RGD PMID:12847223 MGI:5572888 NCBI chr 9:12,647,605...12,654,190
Ensembl chr 9:12,647,259...12,654,170
JBrowse link
cellular response to molecule of bacterial origin term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acod1 aconitate decarboxylase 1 involved_in ISO (MGI:5489057|PMID:19014335) RGD PMID:19014335 MGI:5489057 NCBI chr15:79,871,819...79,881,101
Ensembl chr15:79,871,827...79,880,529
JBrowse link
G Cd14 CD14 molecule involved_in ISO (PMID:15039339) RGD PMID:15039339 NCBI chr18:28,335,522...28,337,383
Ensembl chr18:28,335,340...28,337,261
JBrowse link
G Cyrib CYFIP related Rac1 interactor B involved_in ISO (PMID:31285585)
(MGI:6383257|PMID:31285585)
RGD PMID:31285585 MGI:6383257 NCBI chr 7:95,633,876...95,760,588
Ensembl chr 7:95,633,876...95,697,686
JBrowse link
G Fcgr2b Fc fragment of IgG receptor IIb acts_upstream_of_or_within ISO MGI:1857166 (MGI:3608295|PMID:12385742) RGD PMID:12385742 MGI:3608295 NCBI chr13:83,191,253...83,207,776
Ensembl chr13:83,193,163...83,207,778
JBrowse link
G Fzd5 frizzled class receptor 5 involved_in ISO
IEA
(PMID:16601243)
GO_REF:0000107
RGD
Ensembl
PMID:16601243 GO_REF:0000107 NCBI chr 9:66,117,370...66,119,127
Ensembl chr 9:66,113,112...66,121,457
JBrowse link
G Ncam1 neural cell adhesion molecule 1 IEP RGD PMID:19853610 RGD:2325979 NCBI chr 8:49,865,629...50,165,687
Ensembl chr 8:49,865,633...50,166,014
JBrowse link
G Sirt2 sirtuin 2 involved_in ISS
ISO
GO_REF:0000024
(PMID:23908241)
UniProt
RGD
PMID:23908241 GO_REF:0000024 NCBI chr 1:84,053,883...84,076,975
Ensembl chr 1:84,052,903...84,076,975