LOC101698564 (guanylate-binding protein 5) - Rat Genome Database

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Gene: LOC101698564 (guanylate-binding protein 5) Heterocephalus glaber
Analyze
Symbol: LOC101698564
Name: guanylate-binding protein 5
RGD ID: 18913360
Description: ENCODES a protein that exhibits GTP binding (inferred); GTPase activity (inferred); INVOLVED IN cellular response to type II interferon (inferred); innate immune response (inferred)
Type: protein-coding
RefSeq Status: MODEL
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247428,426,088 - 8,441,480 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_004841310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AHKG01020504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: XM_004841310   ⟹   XP_004841367
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247428,426,088 - 8,441,480 (+)NCBI
Protein Sequences
Protein RefSeqs XP_004841367 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000006724
Reference Protein Sequences
RefSeq Acc Id: XP_004841367   ⟸   XM_004841310
- UniProtKB: G5BGF3 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000004912 ENTREZGENE
Ensembl Transcript ENSHGLT00000006807 ENTREZGENE
Gene3D-CATH Guanylate-binding protein, C-terminal domain UniProtKB/TrEMBL
  P-loop containing nucleotide triphosphate hydrolases UniProtKB/TrEMBL
InterPro G_GB1_RHD3_dom UniProtKB/TrEMBL
  GBP_C UniProtKB/TrEMBL
  Guanylate-bd/ATL_C UniProtKB/TrEMBL
  Guanylate-bd_C_sf UniProtKB/TrEMBL
  Guanylate-bd_N UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/TrEMBL
NCBI Gene LOC101698564 ENTREZGENE
PANTHER GUANYLATE BINDING PROTEIN UniProtKB/TrEMBL
  GUANYLATE-BINDING PROTEIN 5 UniProtKB/TrEMBL
Pfam GBP UniProtKB/TrEMBL
  GBP_C UniProtKB/TrEMBL
PROSITE G_GB1_RHD3 UniProtKB/TrEMBL
Superfamily-SCOP Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain UniProtKB/TrEMBL
  P-loop containing nucleoside triphosphate hydrolases UniProtKB/TrEMBL
UniProt G5BGF3 ENTREZGENE, UniProtKB/TrEMBL