Symbol:
Tnip2
Name:
TNFAIP3 interacting protein 2
RGD ID:
18934000
Description:
ENCODES a protein that exhibits polyubiquitin modification-dependent protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN CD40 signaling pathway (ortholog); interleukin-1-mediated signaling pathway (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH cherubism (ortholog); Ellis-Van Creveld syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
TNFAIP3-interacting protein 2
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Tnip2
TNIP2 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 4 2,741,648 - 2,756,336 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 4 2,741,648 - 2,756,342 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 4 2,743,375 - 2,758,063 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 4 2,713,185 - 2,727,859 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 4 2,780,592 - 2,795,267 NCBI Celera 4 2,654,688 - 2,669,415 (-) NCBI Celera Cytogenetic Map 4 p16.3 NCBI HuRef 4 2,682,483 - 2,696,862 (-) NCBI HuRef CHM1_1 4 2,741,351 - 2,756,073 (-) NCBI CHM1_1 T2T-CHM13v2.0 4 2,740,398 - 2,755,095 (-) NCBI T2T-CHM13v2.0
Tnip2 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 5 34,653,440 - 34,671,323 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 5 34,653,431 - 34,671,335 (-) Ensembl GRCm39 Ensembl GRCm38 5 34,496,096 - 34,513,979 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 5 34,496,087 - 34,513,991 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 5 34,838,745 - 34,856,628 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 5 34,812,953 - 34,830,836 (-) NCBI MGSCv36 mm8 Celera 5 31,967,000 - 31,984,842 (-) NCBI Celera Cytogenetic Map 5 B2 NCBI cM Map 5 17.89 NCBI
Tnip2 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 14 80,452,936 - 80,470,141 (+) NCBI GRCr8 mRatBN7.2 14 76,228,350 - 76,245,553 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 14 76,228,371 - 76,275,265 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 14 80,680,797 - 80,698,114 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 14 81,921,444 - 81,938,761 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 14 78,366,692 - 78,384,009 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 14 81,487,934 - 81,505,889 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 14 81,488,008 - 81,504,686 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 14 82,175,144 - 82,192,502 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 14 81,870,935 - 81,888,169 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 14 81,873,325 - 81,890,560 (+) NCBI Celera 14 75,152,826 - 75,170,060 (+) NCBI Celera Cytogenetic Map 14 q21 NCBI
Tnip2 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 NW_004955514 1,682,641 - 1,687,881 (-) NCBI ChiLan1.0 ChiLan1.0
TNIP2 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 3 3,077,308 - 3,092,199 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 4 3,013,213 - 3,028,094 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 4 2,884,265 - 2,899,160 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 4 2,787,594 - 2,793,893 (-) NCBI panpan1.1 PanPan1.1 panPan2
TNIP2 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 3 61,511,676 - 61,535,480 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 3 64,094,717 - 64,118,689 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 3 61,987,047 - 62,011,284 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 3 61,987,047 - 62,012,472 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 3 61,478,352 - 61,502,338 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 3 61,683,311 - 61,707,304 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 3 62,042,935 - 62,067,151 (+) NCBI UU_Cfam_GSD_1.0
Tnip2 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405285 67,105,267 - 67,139,845 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936477 20,834,849 - 20,841,535 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936477 20,810,188 - 20,841,537 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
TNIP2 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 8 1,533,429 - 1,554,683 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 8 1,530,534 - 1,554,677 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 8 1,115,215 - 1,136,000 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
TNIP2 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 27 46,001,814 - 46,017,676 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 27 46,001,872 - 46,018,494 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666051 2,366,620 - 2,381,224 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
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Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSHGLT00000007256 ⟹ ENSHGLP00000007171
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla_female_1.0 Ensembl NW_004624755 24,976,361 - 25,001,397 (+) Ensembl
RefSeq Acc Id:
XM_004847383 ⟹ XP_004847440
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla 1.0 NW_004624755 24,976,376 - 24,995,150 (+) NCBI
RefSeq Acc Id:
XM_021260393 ⟹ XP_021116052
Type:
CODING
Position:
Naked Mole-Rat Assembly Chr Position (strand) Source HetGla 1.0 NW_004624755 24,976,375 - 24,995,150 (+) NCBI
RefSeq Acc Id:
XP_021116052 ⟸ XM_021260393
- Peptide Label:
isoform X1
- UniProtKB:
A0AAX6T1E0 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_004847440 ⟸ XM_004847383
- Peptide Label:
isoform X2
- UniProtKB:
A0AAX6PAM2 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSHGLP00000007171 ⟸ ENSHGLT00000007256
