LOC101703392 (twinfilin-2) - Rat Genome Database

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Gene: LOC101703392 (twinfilin-2) Heterocephalus glaber
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Symbol: LOC101703392
Name: twinfilin-2
RGD ID: 18916141
Description: ENCODES a protein that exhibits actin binding (inferred); pattern recognition receptor activity (inferred); INVOLVED IN activation of innate immune response (inferred); canonical NF-kappaB signal transduction (inferred); defense response to virus (inferred); FOUND IN endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred); endosome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Tlr9; toll like receptor 9; toll-like receptor 9; Twf2; twinfilin actin binding protein 2
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247306,004,706 - 6,020,876 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_004834207   ⟹   XP_004834264
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247306,011,602 - 6,020,857 (-)NCBI
RefSeq Acc Id: XM_021241509   ⟹   XP_021097168
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_0046247306,004,706 - 6,020,876 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004834264 (Get FASTA)   NCBI Sequence Viewer  
  XP_021097168 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000017518
Reference Protein Sequences
RefSeq Acc Id: XP_021097168   ⟸   XM_021241509
- Peptide Label: isoform X2
- UniProtKB: G5AXM8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004834264   ⟸   XM_004834207
- Peptide Label: isoform X1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000012542 ENTREZGENE
Ensembl Transcript ENSHGLT00000017693 ENTREZGENE
Gene3D-CATH Ribonuclease Inhibitor UniProtKB/TrEMBL
  Severin UniProtKB/TrEMBL
  Toll/interleukin-1 receptor homology (TIR) domain UniProtKB/TrEMBL
InterPro ADF-H UniProtKB/TrEMBL
  ADF-H/Gelsolin-like_dom_sf UniProtKB/TrEMBL
  Leu-rich_rpt UniProtKB/TrEMBL
  Leu-rich_rpt_typical-subtyp UniProtKB/TrEMBL
  LRR_12 UniProtKB/TrEMBL
  LRR_dom_sf UniProtKB/TrEMBL
  TIR_dom UniProtKB/TrEMBL
  Toll_tir_struct_dom_sf UniProtKB/TrEMBL
NCBI Gene LOC101703392 ENTREZGENE
PANTHER TOLL-LIKE RECEPTOR 7-RELATED UniProtKB/TrEMBL
  TOLL-LIKE RECEPTOR 9 UniProtKB/TrEMBL
Pfam Cofilin_ADF UniProtKB/TrEMBL
  LRR_12 UniProtKB/TrEMBL
  LRR_8 UniProtKB/TrEMBL
PROSITE ADF_H UniProtKB/TrEMBL
  LRR UniProtKB/TrEMBL
  TIR UniProtKB/TrEMBL
SMART ADF UniProtKB/TrEMBL
  LRR_SD22 UniProtKB/TrEMBL
  LRR_TYP UniProtKB/TrEMBL
  TIR UniProtKB/TrEMBL
Superfamily-SCOP Actin depolymerizing proteins UniProtKB/TrEMBL
  L domain-like UniProtKB/TrEMBL
  Toll/Interleukin receptor TIR domain UniProtKB/TrEMBL
UniProt G5AXM8 ENTREZGENE, UniProtKB/TrEMBL