LOC101719002 (complement C4-A) - Rat Genome Database

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Gene: LOC101719002 (complement C4-A) Heterocephalus glaber
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Symbol: LOC101719002
Name: complement C4-A
RGD ID: 18918944
Description: ENCODES a protein that exhibits endopeptidase inhibitor activity (inferred); INVOLVED IN complement activation (inferred); complement activation, classical pathway (inferred); inflammatory response (inferred); FOUND IN axon (inferred); cell projection (inferred); dendrite (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: C4a; complement C4-A isoform 1 preproprotein; complement C4A (Rodgers blood group)
Latest Assembly: HetGla 1.0 - Naked Mole-Rat female 1.0 Assembly
Position:
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462475424,258,026 - 24,270,710 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_004846919   ⟹   XP_004846976
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475424,258,026 - 24,270,710 (-)NCBI
RefSeq Acc Id: XM_013072872   ⟹   XP_012928326
Type: CODING
Position:
Naked Mole-Rat AssemblyChrPosition (strand)Source
HetGla 1.0NW_00462475424,258,026 - 24,270,710 (-)NCBI
Protein Sequences
Protein RefSeqs XP_004846976 (Get FASTA)   NCBI Sequence Viewer  
  XP_012928326 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSHGLP00000019060
GenBank Protein JAN97669 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_012928326   ⟸   XM_013072872
- Peptide Label: isoform X2
- UniProtKB: A0A0N8ESX5 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_004846976   ⟸   XM_004846919
- Peptide Label: isoform X1
- UniProtKB: A0A0N8ESX5 (UniProtKB/TrEMBL)


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSHGLG00000013660 ENTREZGENE
Ensembl Transcript ENSHGLT00000019251 ENTREZGENE
Gene3D-CATH 1.50.10.20 UniProtKB/TrEMBL
  2.20.130.20 UniProtKB/TrEMBL
  2.40.50.120 UniProtKB/TrEMBL
  2.60.120.1540 UniProtKB/TrEMBL
  2.60.40.1930 UniProtKB/TrEMBL
  2.60.40.1940 UniProtKB/TrEMBL
  6.20.50.160 UniProtKB/TrEMBL
  Alpha-macroglobulin, receptor-binding domain UniProtKB/TrEMBL
  Anaphylotoxins (complement system) UniProtKB/TrEMBL
  Immunoglobulins UniProtKB/TrEMBL
InterPro A-macroglobulin_rcpt-bd UniProtKB/TrEMBL
  A-macroglobulin_rcpt-bd_sf UniProtKB/TrEMBL
  A2M/Complement_sys UniProtKB/TrEMBL
  A2M_N_BRD UniProtKB/TrEMBL
  Alpha-macroglob_thiol-ester_cl UniProtKB/TrEMBL
  Alpha-macroglobulin_TED UniProtKB/TrEMBL
  Anaphylatoxin/fibulin UniProtKB/TrEMBL
  Anaphylatoxin_comp_syst UniProtKB/TrEMBL
  Anaphylatoxn_comp_syst_dom UniProtKB/TrEMBL
  C4_MG1 UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/TrEMBL
  Macroglobln_a2 UniProtKB/TrEMBL
  MacrogloblnA2_CS UniProtKB/TrEMBL
  MG2 UniProtKB/TrEMBL
  MG3 UniProtKB/TrEMBL
  MG4 UniProtKB/TrEMBL
  Netrin_domain UniProtKB/TrEMBL
  Netrin_module_non-TIMP UniProtKB/TrEMBL
  Terpenoid_cyclase/PrenylTrfase UniProtKB/TrEMBL
  TIMP-like_OB-fold UniProtKB/TrEMBL
NCBI Gene LOC101719002 ENTREZGENE
PANTHER COMPLEMENT C4-A-RELATED UniProtKB/TrEMBL
  MACROGLOBULIN / COMPLEMENT UniProtKB/TrEMBL
Pfam A2M UniProtKB/TrEMBL
  A2M_BRD UniProtKB/TrEMBL
  A2M_recep UniProtKB/TrEMBL
  ANATO UniProtKB/TrEMBL
  C4_MG1 UniProtKB/TrEMBL
  CO4A-B_CUB_C UniProtKB/TrEMBL
  MG2 UniProtKB/TrEMBL
  MG3 UniProtKB/TrEMBL
  MG4 UniProtKB/TrEMBL
  NTR UniProtKB/TrEMBL
  TED_complement UniProtKB/TrEMBL
PRINTS ANAPHYLATOXN UniProtKB/TrEMBL
PROSITE ALPHA_2_MACROGLOBULIN UniProtKB/TrEMBL
  ANAPHYLATOXIN_1 UniProtKB/TrEMBL
  ANAPHYLATOXIN_2 UniProtKB/TrEMBL
  NTR UniProtKB/TrEMBL
SMART A2M UniProtKB/TrEMBL
  A2M_N_2 UniProtKB/TrEMBL
  A2M_recep UniProtKB/TrEMBL
  ANATO UniProtKB/TrEMBL
  C345C UniProtKB/TrEMBL
  Thiol-ester_cl UniProtKB/TrEMBL
Superfamily-SCOP Alpha-macroglobulin receptor domain UniProtKB/TrEMBL
  Anaphylotoxins (complement system) UniProtKB/TrEMBL
  Terpenoid cyclases/Protein prenyltransferases UniProtKB/TrEMBL
  TIMP-like UniProtKB/TrEMBL
UniProt A0A0N8ESX5 ENTREZGENE, UniProtKB/TrEMBL