Sle19_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Sle19_m (systematic lupus erythematosus susceptibility 19 (mouse)) Mus musculus

Symbol: Sle19_m
Name: systematic lupus erythematosus susceptibility 19 (mouse)
RGD ID: 4141805
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm39730,032,485 - 81,135,653MOUSEQTLGRCm39
GRCm38730,333,060 - 81,485,905MOUSEQTLGRCm38
cM Map7syntenicMOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Sle19_mMouseimmune system phenotype  IEA 704405Created by mouse qtl pipelineMGIPMID:16943797
Sle19_mMouseincreased anti-nuclear antigen antibody level  IAGP 5509061 MGIPMID:16943797
Sle19_mMouseincreased susceptibility to systemic lupus erythematosus  IAGP 5509061 MGIPMID:16943797

#
Reference Title
Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
PMID:16943797  



1 to 20 of 2004 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
16129794930479H17RikRIKEN cDNA 4930479H17 gene73004602230053372Mouse
1313672Lrfn3leucine rich repeat and fibronectin type III domain containing 373005493930062197Mouse
14999904Gm25259predicted gene, 2525973005615730056349Mouse
10010971Gm42376predicted gene, 4237673009159930098071Mouse
9644014Gm32029predicted gene, 3202973011034130113144Mouse
1624060TyrobpTYRO protein tyrosine kinase binding protein73011320730117007Mouse
1550588Hcsthematopoietic cell signal transducer73011713730119279Mouse
163678559LOC128925679CapStarr-seq enhancer MGSCv37_chr7:31204808-3120496173011921430119367Mouse
401832145LOC132412019STARR-positive B cell enhancer ABC_E883773012097830121279Mouse
1317603Nfkbidnuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, delta73012115630128173Mouse
401838947LOC132412020STARR-positive B cell enhancer ABC_E491673012155730121858Mouse
9607351Gm30646predicted gene, 3064673013013830132272Mouse
401702138LOC131373027STARR-seq mESC enhancer starr_1851973013402130137029Mouse
736697Aplp1amyloid beta precursor like protein 173013440530144960Mouse
1318235Kirrel2kirre like nephrin family adhesion molecule 273014695530160105Mouse
12795813Gm45979predicted gene, 4597973014987130155310Mouse
737511Nphs1nephrosis 1, nephrin73015725930188048Mouse
1610425Nphs1osnephrosis 1 homolog, nephrin, opposite strand73016158930165016Mouse
2308587Rps12-ps4ribosomal protein S12, pseudogene 473018408530184603Mouse
1315566Prodh2proline dehydrogenase (oxidase) 273019301130212830Mouse

1 to 20 of 2004 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match

1 to 10 of 115 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
27226781Tibl3_mtibia length 3, 5 week (mouse)774849748122199223Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
1357586Mdmsc3_mmodifier of muscularity 3 (mouse)Not determined73444786968448018Mouse
11252140Fdr1_mfat response to dietary restriction 1 (mouse)74114882075148965Mouse
13506761Tbthq1_mtrabecular bone thickness QTL 1 (mouse)76234974867749748Mouse
25394571Skmw59_mskeletal muscle weight 59, TA (mouse)74422494344675382Mouse
1301784Ses2_msalmonella enteritidis susceptibility 2 (mouse)Not determined767290094101290240Mouse
25394574Skmw61_mskeletal muscle weight 61, EDL (mouse)74422494344675382Mouse
12790989Tgl6_mtriglyceride 6 (mouse)72754054961540549Mouse
25394572Skmw60_mskeletal muscle weight 60, gastroc (mouse)74455116444702447Mouse

1 to 10 of 115 rows


Database
Acc Id
Source(s)
MGD MGI:3701658 MouseQtl

Note Type Note Reference