Gm44812 (predicted gene 44812) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Gm44812 (predicted gene 44812) Mus musculus
Analyze
Symbol: Gm44812
Name: predicted gene 44812
RGD ID: 11667120
MGI Page MGI
Description:
Type: protein-coding (Ensembl: lncRNA)
RefSeq Status: MODEL
Previously known as: uncharacterized protein Gm44812
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39770,158,905 - 70,234,709 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl770,165,215 - 70,240,016 (+)EnsemblGRCm39 Ensembl
GRCm38770,509,157 - 70,584,961 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl770,574,834 - 70,585,751 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map7CNCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314306Micab7_mMicrobial abundance of Bacteroidales Porphyromonadaceae Odoribacter 7 (mouse)76675405570749713Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
25314305Vmm6_mvariable multisystem mineralization 6, eye (mouse)761849748102749207Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
11252140Fdr1_mfat response to dietary restriction 1 (mouse)74114882075148965Mouse
26884381Bzwq2_mbi-zygomatic width QTL 2, 5 week (mouse)76524974896949207Mouse
1301784Ses2_msalmonella enteritidis susceptibility 2 (mouse)Not determined767290094101290240Mouse
1301663Skull9_mskull morphology 9 (mouse)Not determined75732612191326352Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
1301383Aem2_manti-erythrocyte autoantibody modifier 2 (mouse)Not determined76413542498135653Mouse
1301514Rigs1_mradiation induced gastroschisis 1 (mouse)Not determined73628001592394346Mouse
27095937Ulnl7_mulna length 7, 10 week (mouse)76644974898349207Mouse
1300878Skts1_mskin tumor susceptibility 1 (mouse)Not determined73789138671891582Mouse
11565101Tsve1_mvariable short tail (Tsv) enhancer 1 (mouse)75588950887142720Mouse
1300620Pgia21_mproteoglycan induced arthritis 21 (mouse)Not determined767290094101290240Mouse
13432172Rotet1_mrotarod training ethanol time 1 (mouse)76930486272904862Mouse
13208555Lgth10_mbody length 10 (mouse)751649748125599172Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)761749748121399223Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined739673887103510010Mouse
10402488Dipa2_mdrug induced psychomotor activation 2 (mouse)Not determined73842154872421684Mouse
10054064Bwq11_mbody weight QTL 11 (mouse)Not determined75112495485125093Mouse
1357752Tabw_mtally ho asscoiated body weight (mouse)Not determined74919327883193390Mouse
10053685Eae43_mexperimental allergic encephalomyelitis susceptibility 43 (mouse)Not determined75112495485125093Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1301155Bpq7_mblood pressure QTL 7 (mouse)Not determined770143137104143379Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1300654Bomd1_mbone mineral density 1 (mouse)Not determined768365595102365702Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765249748126499172Mouse
27226715Metcl3_mmetatarsal-calcaneal length 3, 5 week (mouse)767849748119499223Mouse
26884444Sklq8_mskull length QTL 8, 10 week (mouse)767849748124199223Mouse
25823170Hrsq7_mhost response to SARS QTL 7, log titer (mouse)754819589116822815Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
1301465Egrm3_mearly growth rate (mouse)Not determined75732612191326352Mouse
1300952Hcs1_mhepatocarcinogenesis susceptibility 1 (mouse)Not determined75732612191326352Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
1301826Pgia3_mproteoglycan induced arthritis 3 (mouse)Not determined767290094101290240Mouse
4141805Sle19_msystematic lupus erythematosus susceptibility 19 (mouse)Not determined3003248581135653Mouse
4141929Chlq18_mcirculating hormone level QTL 18 (mouse)Not determined74114882075148965Mouse
26884418Bzwq7_mbi-zygomatic width QTL 7, 10 week (mouse)767849748105449207Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
12880417V125Dq5_mvitamin D active form serum level QTL 5 (mouse)74524974879249748Mouse
12880418V125Dq6_mvitamin D active form serum level QTL 6 (mouse)75214974886149748Mouse
11532741Tbrs5_mtuberculosis resistance 5 (mouse)74915922783235415Mouse
1302141Fcsa6_mfemoral cross-sectional area 6 (mouse)Not determined74838446182384607Mouse
13506750Tbthq2_mtrabecular bone thickness QTL 2 (mouse)76565974877549748Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)761749748123699223Mouse
12801463Rta1_mretinal aging 1 (mouse)76716802789089989Mouse
11553865Stmm1c_mskin tumor modifier of MSM 1c (mouse)76578898699788986Mouse
26884451Sklq14_mskull length QTL 14, 16 week (mouse)767849748124999172Mouse
11553866Stmm1d_mskin tumor modifier of MSM 1d (mouse)76578898699788986Mouse
25314302Vmm2_mvariable multisystem mineralization 2, heart (mouse)74714974874149748Mouse
25314303Vmm4_mvariable multisystem mineralization 4, kidney (mouse)73729942587049208Mouse
27095907Scvln4_msacral vertebrae length 2, 5 week (mouse)769949748120499223Mouse
25314301Vmm3_mvariable multisystem mineralization 3, lung (mouse)73729942572049748Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000207627
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl770,224,582 - 70,235,499 (+)Ensembl
GRCm38.p6 Ensembl770,574,834 - 70,585,751 (+)Ensembl
Ensembl Acc Id: ENSMUST00000208999
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl770,226,052 - 70,234,709 (+)Ensembl
GRCm38.p6 Ensembl770,576,484 - 70,584,559 (+)Ensembl
Ensembl Acc Id: ENSMUST00000251604
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl770,175,583 - 70,233,987 (+)Ensembl
Ensembl Acc Id: ENSMUST00000251605
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl770,178,012 - 70,234,709 (+)Ensembl
Ensembl Acc Id: ENSMUST00000251606
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl770,178,042 - 70,232,433 (+)Ensembl
Ensembl Acc Id: ENSMUST00000251608
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl770,165,229 - 70,183,323 (+)Ensembl
Ensembl Acc Id: ENSMUST00000251609
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl770,165,215 - 70,183,307 (+)Ensembl
Ensembl Acc Id: ENSMUST00000251610
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl770,224,153 - 70,233,985 (+)Ensembl
Ensembl Acc Id: ENSMUST00000251611
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl770,226,114 - 70,233,020 (+)Ensembl
Ensembl Acc Id: ENSMUST00000251612
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl770,226,069 - 70,232,435 (+)Ensembl
Ensembl Acc Id: ENSMUST00000251613
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl770,234,414 - 70,240,004 (+)Ensembl
Ensembl Acc Id: ENSMUST00000251614
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl770,236,471 - 70,240,016 (+)Ensembl
RefSeq Acc Id: XM_030243181   ⟹   XP_030099041
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39770,167,442 - 70,234,709 (+)NCBI
GRCm38770,517,694 - 70,584,961 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243182   ⟹   XP_030099042
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39770,158,905 - 70,234,709 (+)NCBI
GRCm38770,509,157 - 70,584,961 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001778173
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39770,212,585 - 70,234,709 (+)NCBI
GRCm38770,562,873 - 70,584,961 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001778175
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39770,224,211 - 70,234,709 (+)NCBI
GRCm38770,574,463 - 70,584,961 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004934232
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39770,212,585 - 70,234,709 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_030099041 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099042 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_030099042   ⟸   XM_030243182
RefSeq Acc Id: XP_030099041   ⟸   XM_030243181

Promoters
RGD ID:15093280
Promoter ID:EPDNEWNC_M1185
Type:single initiation site
Name:Gm44812_1
Description:predicted gene 44812 [Source:MGI Symbol;Acc:MGI:5753388]
SO ACC ID:SO:0000170
Source:EPDNEWNC (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38770,574,818 - 70,574,878EPDNEWNC

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000109021 Ensembl
MGD MGI:5753388 ENTREZGENE
NCBI Gene Gm44812 ENTREZGENE
PhenoGen Gm44812 PhenoGen