Ffar2 (free fatty acid receptor 2) - Rat Genome Database

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Gene: Ffar2 (free fatty acid receptor 2) Mus musculus
Analyze
Symbol: Ffar2
Name: free fatty acid receptor 2
RGD ID: 1552346
MGI Page MGI
Description: Enables G protein-coupled receptor activity. Involved in several processes, including leukocyte chemotaxis involved in inflammatory response; positive regulation of cytokine production; and regulation of insulin secretion. Is active in plasma membrane. Is expressed in pancreas; pancreas epithelium; superior cervical ganglion; and testis. Orthologous to human FFAR2 (free fatty acid receptor 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: G protein-coupled receptor 43; G-protein coupled receptor 43; GPCR43; Gpr; Gpr43; leukocyte-specific STAT-induced GPCR; MGC28611
RGD Orthologs
Human
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39730,517,778 - 30,523,200 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl730,517,773 - 30,523,200 (-)EnsemblGRCm39 Ensembl
GRCm38730,818,031 - 30,823,775 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl730,818,348 - 30,823,775 (-)EnsemblGRCm38mm10GRCm38
MGSCv37731,603,376 - 31,608,794 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36730,527,117 - 30,532,535 (-)NCBIMGSCv36mm8
Celera725,400,917 - 25,406,335 (-)NCBICelera
Cytogenetic Map7B1NCBI
cM Map719.25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cell projection  (IEA,ISO)
plasma membrane  (IBA,IDA,ISO,ISS)

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. Mouse MP Annotation Import Pipeline RGD automated import pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9441896   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12393494   PMID:12477932   PMID:12684041   PMID:15489334   PMID:16123168   PMID:16141072   PMID:16141073  
PMID:16602821   PMID:18499755   PMID:18554416   PMID:18799693   PMID:19865172   PMID:19917676   PMID:20959533   PMID:21115338   PMID:21267068   PMID:21518883   PMID:21698257   PMID:21873635  
PMID:21947380   PMID:22190648   PMID:23066016   PMID:23341498   PMID:23589301   PMID:23652017   PMID:23665276   PMID:23828891   PMID:23885020   PMID:24194600   PMID:24327954   PMID:25581519  
PMID:25828455   PMID:25914377   PMID:26023106   PMID:26030851   PMID:26075576   PMID:26239054   PMID:26394664   PMID:26742586   PMID:27324831   PMID:27332875   PMID:27385588   PMID:27658303  
PMID:27866157   PMID:27959892   PMID:27966553   PMID:28212864   PMID:28346408   PMID:28692672   PMID:28727837   PMID:28873082   PMID:29061999   PMID:29411774   PMID:29515566   PMID:29524208  
PMID:29644622   PMID:29768180   PMID:30177845   PMID:30201970   PMID:30203438   PMID:31076530   PMID:31272808   PMID:31332169   PMID:31628054   PMID:31685604   PMID:31694949   PMID:31719611  
PMID:31876919   PMID:31917258   PMID:32093510   PMID:32130898   PMID:32358041   PMID:32641826   PMID:32725930   PMID:32853993   PMID:32901017   PMID:32958255   PMID:32991574   PMID:33539767  
PMID:33597149   PMID:33754024   PMID:33934399   PMID:34210970   PMID:34233192   PMID:34262176   PMID:34330996   PMID:34622466   PMID:34626852   PMID:34818236   PMID:34818549   PMID:34975320  
PMID:35437874   PMID:35671792   PMID:36254783   PMID:36965576   PMID:37215085   PMID:37264394   PMID:37993715   PMID:38032704   PMID:38224777   PMID:38329121   PMID:38355793   PMID:38402237  
PMID:38467381   PMID:38524121   PMID:38794746  


Genomics

Comparative Map Data
Ffar2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39730,517,778 - 30,523,200 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl730,517,773 - 30,523,200 (-)EnsemblGRCm39 Ensembl
GRCm38730,818,031 - 30,823,775 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl730,818,348 - 30,823,775 (-)EnsemblGRCm38mm10GRCm38
MGSCv37731,603,376 - 31,608,794 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36730,527,117 - 30,532,535 (-)NCBIMGSCv36mm8
Celera725,400,917 - 25,406,335 (-)NCBICelera
Cytogenetic Map7B1NCBI
cM Map719.25NCBI
FFAR2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381935,448,257 - 35,451,767 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1935,443,907 - 35,451,767 (+)EnsemblGRCh38hg38GRCh38
GRCh371935,939,159 - 35,942,669 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361940,632,457 - 40,633,449 (+)NCBINCBI36Build 36hg18NCBI36
Build 341940,632,456 - 40,633,449NCBI
Celera1932,654,111 - 32,656,163 (+)NCBICelera
Cytogenetic Map19q13.12NCBI
HuRef1932,447,169 - 32,449,221 (+)NCBIHuRef
CHM1_11935,942,259 - 35,944,310 (+)NCBICHM1_1
T2T-CHM13v2.01937,992,993 - 37,996,503 (+)NCBIT2T-CHM13v2.0
Ffar2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8195,199,277 - 95,202,599 (-)NCBIGRCr8
mRatBN7.2186,071,855 - 86,075,049 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl186,072,184 - 86,075,033 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx191,487,329 - 91,488,321 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0199,953,498 - 99,954,490 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0193,245,625 - 93,246,617 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0189,268,197 - 89,271,942 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl189,268,938 - 89,269,930 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0190,424,349 - 90,426,614 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4185,878,452 - 85,879,444 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1185,956,562 - 85,957,555 (-)NCBI
Celera180,441,218 - 80,442,210 (-)NCBICelera
Cytogenetic Map1q21NCBI
FFAR2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22041,457,880 - 41,465,932 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11943,441,222 - 43,449,252 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01932,394,401 - 32,398,730 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11941,132,599 - 41,134,646 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1941,132,599 - 41,133,591 (+)Ensemblpanpan1.1panPan2
FFAR2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11117,197,535 - 117,201,613 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1117,198,289 - 117,199,284 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1116,600,488 - 116,603,385 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01117,797,278 - 117,800,175 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1117,798,032 - 117,799,027 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11117,360,581 - 117,363,478 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01116,986,040 - 116,988,937 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01118,041,328 - 118,044,225 (-)NCBIUU_Cfam_GSD_1.0
LOC101971238
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934910,749,526 - 10,751,680 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936570895,364 - 896,356 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936570895,364 - 896,356 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FFAR2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl644,901,159 - 44,904,459 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1644,899,879 - 44,904,461 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2640,281,282 - 40,285,863 (-)NCBISscrofa10.2Sscrofa10.2susScr3
FFAR2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1630,375,607 - 30,379,479 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl630,377,427 - 30,378,419 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660738,169,045 - 8,171,781 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ffar2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247948,140,629 - 8,155,258 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247948,140,629 - 8,155,313 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:633
Count of miRNA genes:189
Interacting mature miRNAs:195
Transcripts:ENSMUST00000053156, ENSMUST00000163504, ENSMUST00000168528
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
4141566Femwf8_mfemur work to failure 8 (mouse)Not determined1303248547032621Mouse
1301969Lbw5_mlupus NZB x NZW 5 (mouse)Not determined72684761560851775Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
25314314Sccor1_msynaptonemal complex length to mean MLH1 count ratio 1 (mouse)71333392547349748Mouse
7394747asp3_maudiogenic seizure prone 3 (mouse)Not determined72730579836842367Mouse
12790989Tgl6_mtriglyceride 6 (mouse)72754054961540549Mouse
11522751Cocia17_mcocaine-induced activity, QTL 17 (mouse)71313520447135204Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
4141805Sle19_msystematic lupus erythematosus susceptibility 19 (mouse)Not determined3003248581135653Mouse
1301572Sluc30_msusceptibility to lung cancer 30 (mouse)Not determined7243169636431844Mouse
1357699Nhdlq6_mnon-HDL QTL 6 (mouse)Not determined7998886743988984Mouse
10449158Eosn3_meosinophil differential 3 (mouse)71248087746480877Mouse
1301709Bdt4_mbone density traits 4 (mouse)Not determined72288857256888716Mouse
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
1301041Prnr2_mprion resistance 2 (mouse)Not determined71872879439674033Mouse
12904742Litsq2_mlitter size QTL 2 (mouse)72267388756674033Mouse
1301622Eae12_msusceptibility to experimental allergic encephalomyelitis 12 (mouse)Not determined71928001553280104Mouse
11354952Pdcc1_mplasmacytoid dentritic cell compartment 1 (mouse)72306653157066531Mouse
10449139Eosn1_meosinophil differential 1 (mouse)71248087746480877Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1301052Bhr6_mbronchial hyperresponsiveness 6 (mouse)Not determined71984225053842367Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1558893Spir1_mStreptococcus pneumoniae infection resistance 1 (mouse)Not determined71030579844305936Mouse
1559016Drsi_mDCC-related Spp1 induction (mouse)Not determined71663729349159331Mouse

Markers in Region
Ffar2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38730,819,410 - 30,819,852UniSTSGRCm38
MGSCv37731,604,275 - 31,605,133UniSTSGRCm37
Celera725,401,970 - 25,402,412UniSTS
Cytogenetic Map7B1UniSTS
cM Map7 UniSTS
ha1258  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38730,822,066 - 30,823,245UniSTSGRCm38
MGSCv37731,607,085 - 31,608,264UniSTSGRCm37
Celera725,404,626 - 25,405,805UniSTS
Cytogenetic Map7B1UniSTS
Ffar2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38730,819,256 - 30,820,114UniSTSGRCm38
MGSCv37731,604,275 - 31,605,133UniSTSGRCm37
Celera725,401,816 - 25,402,674UniSTS
Cytogenetic Map7B1UniSTS
cM Map7 UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001168509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001168510 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001168511 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001168512 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_146187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250549 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011250554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC165340 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF545043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI573563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI607149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK078861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX228700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX231878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000053156   ⟹   ENSMUSP00000052600
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl730,517,773 - 30,523,200 (-)Ensembl
GRCm38.p6 Ensembl730,818,348 - 30,823,775 (-)Ensembl
Ensembl Acc Id: ENSMUST00000163504   ⟹   ENSMUSP00000127758
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl730,517,782 - 30,520,564 (-)Ensembl
GRCm38.p6 Ensembl730,818,357 - 30,821,139 (-)Ensembl
Ensembl Acc Id: ENSMUST00000168528   ⟹   ENSMUSP00000129398
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl730,518,541 - 30,521,073 (-)Ensembl
GRCm38.p6 Ensembl730,819,116 - 30,821,648 (-)Ensembl
Ensembl Acc Id: ENSMUST00000186059   ⟹   ENSMUSP00000140484
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl730,519,138 - 30,520,572 (-)Ensembl
GRCm38.p6 Ensembl730,819,713 - 30,821,147 (-)Ensembl
Ensembl Acc Id: ENSMUST00000186339   ⟹   ENSMUSP00000140493
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl730,518,993 - 30,520,563 (-)Ensembl
GRCm38.p6 Ensembl730,819,568 - 30,821,138 (-)Ensembl
Ensembl Acc Id: ENSMUST00000186534   ⟹   ENSMUSP00000140215
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl730,519,111 - 30,520,402 (-)Ensembl
GRCm38.p6 Ensembl730,819,686 - 30,820,977 (-)Ensembl
RefSeq Acc Id: NM_001168509   ⟹   NP_001161981
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,517,782 - 30,521,073 (-)NCBI
GRCm38730,818,357 - 30,821,648 (-)NCBI
MGSCv37731,603,376 - 31,608,794 (-)RGD
Celera725,400,917 - 25,406,335 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001168510   ⟹   NP_001161982
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,517,782 - 30,520,617 (-)NCBI
GRCm38730,818,357 - 30,821,192 (-)NCBI
MGSCv37731,603,376 - 31,608,794 (-)RGD
Celera725,400,917 - 25,406,335 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001168511   ⟹   NP_001161983
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,517,782 - 30,520,564 (-)NCBI
GRCm38730,818,357 - 30,821,139 (-)NCBI
MGSCv37731,603,376 - 31,608,794 (-)RGD
Celera725,400,917 - 25,406,335 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001168512   ⟹   NP_001161984
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,517,782 - 30,520,402 (-)NCBI
GRCm38730,818,357 - 30,820,977 (-)NCBI
MGSCv37731,603,376 - 31,608,794 (-)RGD
Celera725,400,917 - 25,406,335 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_146187   ⟹   NP_666299
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,517,782 - 30,523,200 (-)NCBI
GRCm38730,818,357 - 30,823,775 (-)NCBI
MGSCv37731,603,376 - 31,608,794 (-)RGD
Celera725,400,917 - 25,406,335 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011250548   ⟹   XP_011248850
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,517,778 - 30,520,623 (-)NCBI
GRCm38730,819,029 - 30,821,197 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011250549   ⟹   XP_011248851
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,517,778 - 30,521,093 (-)NCBI
GRCm38730,819,029 - 30,821,667 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011250552   ⟹   XP_011248854
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,517,778 - 30,520,458 (-)NCBI
GRCm38730,819,029 - 30,821,051 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011250553   ⟹   XP_011248855
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,517,778 - 30,520,477 (-)NCBI
GRCm38730,818,031 - 30,821,051 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011250554   ⟹   XP_011248856
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39730,517,778 - 30,523,119 (-)NCBI
GRCm38730,818,031 - 30,823,697 (-)NCBI
Sequence:
RefSeq Acc Id: NP_666299   ⟸   NM_146187
- UniProtKB: Q8VCK6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001161981   ⟸   NM_001168509
- UniProtKB: Q8VCK6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001161982   ⟸   NM_001168510
- UniProtKB: Q8VCK6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001161983   ⟸   NM_001168511
- UniProtKB: Q8VCK6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001161984   ⟸   NM_001168512
- UniProtKB: Q8VCK6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011248856   ⟸   XM_011250554
- Peptide Label: isoform X1
- UniProtKB: Q8VCK6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011248855   ⟸   XM_011250553
- Peptide Label: isoform X1
- UniProtKB: Q8VCK6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011248851   ⟸   XM_011250549
- Peptide Label: isoform X1
- UniProtKB: Q8VCK6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011248850   ⟸   XM_011250548
- Peptide Label: isoform X1
- UniProtKB: Q8VCK6 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011248854   ⟸   XM_011250552
- Peptide Label: isoform X1
- UniProtKB: Q8VCK6 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000127758   ⟸   ENSMUST00000163504
Ensembl Acc Id: ENSMUSP00000140215   ⟸   ENSMUST00000186534
Ensembl Acc Id: ENSMUSP00000140493   ⟸   ENSMUST00000186339
Ensembl Acc Id: ENSMUSP00000140484   ⟸   ENSMUST00000186059
Ensembl Acc Id: ENSMUSP00000052600   ⟸   ENSMUST00000053156
Ensembl Acc Id: ENSMUSP00000129398   ⟸   ENSMUST00000168528
Protein Domains
G-protein coupled receptors family 1 profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8VCK6-F1-model_v2 AlphaFold Q8VCK6 1-330 view protein structure

Promoters
RGD ID:8663525
Promoter ID:EPDNEW_M9794
Type:multiple initiation site
Name:Ffar2_1
Description:Mus musculus free fatty acid receptor 2 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M9795  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38730,821,150 - 30,821,210EPDNEW
RGD ID:8663527
Promoter ID:EPDNEW_M9795
Type:initiation region
Name:Ffar2_2
Description:Mus musculus free fatty acid receptor 2 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M9794  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38730,823,831 - 30,823,891EPDNEW
RGD ID:6841104
Promoter ID:MM_KWN:49864
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day4,   3T3L1_Day6
Transcripts:NM_001168509,   NM_001168510,   NM_001168511,   NM_001168512
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36731,606,091 - 31,606,737 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2441731 AgrOrtholog
Ensembl Genes ENSMUSG00000051314 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000053156 ENTREZGENE
  ENSMUST00000053156.10 UniProtKB/Swiss-Prot
  ENSMUST00000163504 ENTREZGENE
  ENSMUST00000163504.8 UniProtKB/Swiss-Prot
  ENSMUST00000168528 ENTREZGENE
  ENSMUST00000168528.8 UniProtKB/Swiss-Prot
  ENSMUST00000186059.2 UniProtKB/TrEMBL
  ENSMUST00000186339.7 UniProtKB/TrEMBL
  ENSMUST00000186534.2 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPR40-rel_orph UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:233079 UniProtKB/Swiss-Prot
MGD MGI:2441731 ENTREZGENE
NCBI Gene 233079 ENTREZGENE
PANTHER FREE FATTY ACID RECEPTOR 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FREE FATTY ACID RECEPTOR 2-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB FFAR2 RGD
PhenoGen Ffar2 PhenoGen
PRINTS GPCRRHODOPSN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPR40FAMILY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A087WQJ1_MOUSE UniProtKB/TrEMBL
  A0A087WR60_MOUSE UniProtKB/TrEMBL
  A0A087WR67_MOUSE UniProtKB/TrEMBL
  FFAR2_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE