Gm30459 (predicted gene, 30459) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: Gm30459 (predicted gene, 30459) Mus musculus
Analyze
Symbol: Gm30459
Name: predicted gene, 30459
RGD ID: 9601342
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39774,415,735 - 74,420,991 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl774,367,063 - 74,421,066 (+)EnsemblGRCm39 Ensembl
GRCm38774,765,987 - 74,771,243 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl774,765,987 - 74,771,243 (+)EnsemblGRCm38mm10GRCm38
Celera772,228,949 - 72,234,205 (+)NCBICelera
Cytogenetic Map7D1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  



.

.
Variants in Gm30459
314 total Variants

1 to 10 of 57 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
25314305Vmm6_mvariable multisystem mineralization 6, eye (mouse)761849748102749207Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
11252140Fdr1_mfat response to dietary restriction 1 (mouse)74114882075148965Mouse
26884381Bzwq2_mbi-zygomatic width QTL 2, 5 week (mouse)76524974896949207Mouse
1301784Ses2_msalmonella enteritidis susceptibility 2 (mouse)Not determined767290094101290240Mouse
1301663Skull9_mskull morphology 9 (mouse)Not determined75732612191326352Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
1301383Aem2_manti-erythrocyte autoantibody modifier 2 (mouse)Not determined76413542498135653Mouse
1301514Rigs1_mradiation induced gastroschisis 1 (mouse)Not determined73628001592394346Mouse

1 to 10 of 57 rows





RefSeq Transcripts XR_391623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC154397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK140552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000206203
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl774,415,735 - 74,421,060 (+)Ensembl
GRCm38.p6 Ensembl774,765,987 - 74,771,243 (+)Ensembl
Ensembl Acc Id: ENSMUST00000327252
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl774,367,063 - 74,421,066 (+)Ensembl
RefSeq Acc Id: XR_391623
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39774,415,735 - 74,420,991 (+)NCBI
GRCm38774,765,987 - 74,771,243 (+)NCBI
Sequence:


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000108468 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000206203 ENTREZGENE
MGD MGI:5589618 ENTREZGENE
NCBI Gene Gm30459 ENTREZGENE
PhenoGen Gm30459 PhenoGen
RNAcentral URS00009B99EA RNACentral