Mef2a (myocyte enhancer factor 2A) - Rat Genome Database
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Gene: Mef2a (myocyte enhancer factor 2A) Mus musculus
Analyze
Symbol: Mef2a
Name: myocyte enhancer factor 2A
RGD ID: 1621608
MGI Page MGI
Description: Exhibits several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and activating transcription factor binding activity. Involved in several processes, including mitochondrion organization; positive regulation of glucose import; and positive regulation of macromolecule metabolic process. Localizes to chromatin and nucleus. Is expressed in several structures, including brain; cardiovascular system; embryo mesenchyme; genitourinary system; and sensory organ. Human ortholog(s) of this gene implicated in dilated cardiomyopathy. Orthologous to human MEF2A (myocyte enhancer factor 2A); INTERACTS WITH 1,2-dichloroethane; 1,2-dimethylhydrazine; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: A430079H05Rik; myocyte-specific enhancer factor 2A
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39766,880,911 - 67,026,435 (-)NCBIGRCm39mm39
GRCm39 Ensembl766,880,911 - 67,022,606 (-)Ensembl
GRCm38767,231,163 - 67,376,456 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl767,231,163 - 67,372,858 (-)EnsemblGRCm38mm10GRCm38
MGSCv37774,378,710 - 74,517,744 (-)NCBIGRCm37mm9NCBIm37
MGSCv36767,112,774 - 67,251,808 (-)NCBImm8
Celera764,692,674 - 64,806,488 (-)NCBICelera
Cytogenetic Map7CNCBI
cM Map736.72NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP,ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2-amino-2-deoxy-D-glucopyranose  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4-phenylbutyric acid  (ISO)
5-azacytidine  (EXP)
acrolein  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
aldehydo-D-glucosamine  (ISO)
alpha-pinene  (ISO)
benzene  (ISO)
benzo[a]pyrene diol epoxide I  (ISO)
beta-D-glucosamine  (ISO)
bis(2-chloroethyl) sulfide  (EXP)
bisphenol A  (ISO)
cadmium dichloride  (ISO)
caffeine  (ISO)
carbamazepine  (ISO)
chloroprene  (ISO)
choline  (EXP)
cocaine  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
dantrolene  (ISO)
dibutyl phthalate  (ISO)
diclofenac  (ISO)
dioxygen  (ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
enniatin  (ISO)
Enterolactone  (ISO)
ethanol  (EXP)
folic acid  (EXP)
geraniol  (ISO)
L-methionine  (EXP)
lead diacetate  (EXP)
leflunomide  (ISO)
metformin  (ISO)
methylmercury chloride  (EXP,ISO)
metoprolol  (ISO)
nickel atom  (ISO)
nitric oxide  (EXP)
oxytocin  (ISO)
ozone  (ISO)
paracetamol  (ISO)
phenobarbital  (EXP)
phenylmercury acetate  (ISO)
propiconazole  (EXP)
raloxifene  (ISO)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (EXP)
SB 431542  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (ISO)
succimer  (EXP)
sulfates  (ISO)
tamoxifen  (ISO)
tauroursodeoxycholic acid  (ISO)
theophylline  (ISO)
topotecan  (ISO)
torcetrapib  (ISO)
trichostatin A  (ISO)
triptonide  (EXP)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
vorinostat  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

Additional References at PubMed
PMID:7643214   PMID:7646512   PMID:8026334   PMID:8096811   PMID:8114702   PMID:8530078   PMID:8575763   PMID:8674419   PMID:8817457   PMID:8889548   PMID:8900141   PMID:8916939  
PMID:8993831   PMID:9013788   PMID:9111346   PMID:9162005   PMID:9430690   PMID:9738004   PMID:10207130   PMID:10349636   PMID:10737771   PMID:10922068   PMID:11042159   PMID:11044609  
PMID:11076861   PMID:11081517   PMID:11160896   PMID:11217851   PMID:11585834   PMID:11809751   PMID:12097321   PMID:12130539   PMID:12379849   PMID:12466851   PMID:12477932   PMID:12520002  
PMID:12663654   PMID:12694204   PMID:12893821   PMID:12904583   PMID:14610273   PMID:14630949   PMID:14681479   PMID:14722059   PMID:15226823   PMID:15483225   PMID:15491989   PMID:15507520  
PMID:15618518   PMID:15728583   PMID:15834131   PMID:15890335   PMID:16043483   PMID:16141072   PMID:16141073   PMID:16280085   PMID:16407236   PMID:16424906   PMID:16484498   PMID:16847152  
PMID:17046827   PMID:17164432   PMID:17336904   PMID:17431507   PMID:17646162   PMID:17696759   PMID:17785444   PMID:17786239   PMID:17875930   PMID:17967808   PMID:18093911   PMID:18198354  
PMID:18216015   PMID:18222924   PMID:18287559   PMID:18448675   PMID:18799693   PMID:19075228   PMID:19188439   PMID:19389706   PMID:19782130   PMID:19935709   PMID:20059953   PMID:20093629  
PMID:20111592   PMID:20178747   PMID:20363751   PMID:20399744   PMID:20412781   PMID:20434996   PMID:20833138   PMID:21233771   PMID:21267068   PMID:21379568   PMID:21447557   PMID:21531906  
PMID:21708977   PMID:21724844   PMID:21768366   PMID:21868385   PMID:21873635   PMID:21953612   PMID:22135324   PMID:22194471   PMID:22466704   PMID:22496871   PMID:22622902   PMID:22764880  
PMID:22885849   PMID:23137781   PMID:23154418   PMID:23477786   PMID:23511190   PMID:24591619   PMID:24694307   PMID:24859004   PMID:24879151   PMID:24934156   PMID:24952961   PMID:25001280  
PMID:25213552   PMID:25416778   PMID:25757744   PMID:25793529   PMID:26240138   PMID:26286136   PMID:26482596   PMID:26586428   PMID:26999812   PMID:27466189   PMID:27632998   PMID:27779093  
PMID:27989458   PMID:28164238   PMID:28641113   PMID:28901289   PMID:28965945   PMID:29054930   PMID:29606596   PMID:30205047   PMID:30362213   PMID:30699340   PMID:30940539   PMID:30995482  
PMID:31420455   PMID:31722213   PMID:32544095   PMID:33315889  


Genomics

Comparative Map Data
Mef2a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39766,880,911 - 67,026,435 (-)NCBIGRCm39mm39
GRCm39 Ensembl766,880,911 - 67,022,606 (-)Ensembl
GRCm38767,231,163 - 67,376,456 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl767,231,163 - 67,372,858 (-)EnsemblGRCm38mm10GRCm38
MGSCv37774,378,710 - 74,517,744 (-)NCBIGRCm37mm9NCBIm37
MGSCv36767,112,774 - 67,251,808 (-)NCBImm8
Celera764,692,674 - 64,806,488 (-)NCBICelera
Cytogenetic Map7CNCBI
cM Map736.72NCBI
MEF2A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1599,565,417 - 99,716,466 (+)EnsemblGRCh38hg38GRCh38
GRCh381599,565,417 - 99,716,482 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3715100,105,622 - 100,256,693 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361597,956,185 - 98,071,524 (+)NCBINCBI36hg18NCBI36
Build 341597,956,184 - 98,071,524NCBI
Celera1576,525,015 - 76,675,549 (+)NCBI
Cytogenetic Map15q26.3NCBI
HuRef1576,235,794 - 76,386,442 (+)NCBIHuRef
CHM1_11599,947,526 - 100,098,006 (+)NCBICHM1_1
Mef2a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21120,847,874 - 120,982,488 (-)NCBI
Rnor_6.0 Ensembl1128,209,971 - 128,341,263 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01128,207,715 - 128,341,681 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01129,273,893 - 129,407,071 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.11122,128,377 - 122,183,406 (-)NCBI
Celera1113,052,879 - 113,157,227 (-)NCBICelera
Cytogenetic Map1q22NCBI
Mef2a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541626,953,798 - 27,051,171 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541626,926,753 - 27,051,171 (+)NCBIChiLan1.0ChiLan1.0
MEF2A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11597,428,808 - 97,579,092 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1597,428,744 - 97,579,092 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01578,246,439 - 78,396,720 (+)NCBIMhudiblu_PPA_v0panPan3
MEF2A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1341,012,103 - 41,177,588 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl341,015,713 - 41,179,448 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha343,686,343 - 43,878,500 (-)NCBI
ROS_Cfam_1.0341,389,861 - 41,582,392 (-)NCBI
UMICH_Zoey_3.1340,922,313 - 41,112,375 (-)NCBI
UNSW_CanFamBas_1.0341,153,499 - 41,343,252 (-)NCBI
UU_Cfam_GSD_1.0341,373,135 - 41,563,186 (-)NCBI
Mef2a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640142,352,128 - 142,499,799 (+)NCBI
SpeTri2.0NW_0049364833,837,891 - 3,982,334 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MEF2A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1138,341,153 - 138,511,311 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11138,398,270 - 138,508,639 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21154,615,130 - 154,689,503 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MEF2A
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12918,150,315 - 18,312,975 (+)NCBI
ChlSab1.1 Ensembl2918,150,854 - 18,309,247 (+)Ensembl
Mef2a
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247684,701,734 - 4,852,833 (-)NCBI

Position Markers
UniSTS:235688  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38767,232,478 - 67,232,569UniSTSGRCm38
MGSCv37774,377,364 - 74,377,455UniSTSGRCm37
Celera764,691,328 - 64,691,419UniSTS
Cytogenetic Map7CUniSTS
cM Map733.0UniSTS
Mef2a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv37774,412,959 - 74,413,092UniSTSGRCm37
Celera764,726,843 - 64,726,976UniSTS
Cytogenetic Map7CUniSTS
cM Map733.0UniSTS
MARC_27533-27534:1035232725:1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38767,231,297 - 67,231,793UniSTSGRCm38
MGSCv37774,376,183 - 74,376,679UniSTSGRCm37
Celera764,690,147 - 64,690,643UniSTS
Cytogenetic Map7CUniSTS
cM Map733.0UniSTS
Mef2a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7CUniSTS
Mef2a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38767,268,073 - 67,268,206UniSTSGRCm38
MGSCv37774,412,959 - 74,413,092UniSTSGRCm37
Celera764,726,843 - 64,726,976UniSTS
Cytogenetic Map7CUniSTS
Mef2a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7CUniSTS
cM Map733.0UniSTS
Mef2a  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7CUniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7346321287493512Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360000072900000Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76500000133900000Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718994869119886157Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719413473142366067Mouse
4141805Sle19_msystematic lupus erythematosus susceptibility 19 (mouse)Not determined3033306081485905Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730500000109400000Mouse
1559000Ossc1_mosteosarcoma susceptibility 1 (mouse)Not determined73440327768403475Mouse
10045622Heal20_mwound healing/regeneration 20 (mouse)Not determined73466713968667295Mouse
1357586Mdmsc3_mmodifier of muscularity 3 (mouse)Not determined73479812168798270Mouse
1301514Rigs1_mradiation induced gastroschisis 1 (mouse)Not determined73658059092745138Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736580590116817642Mouse
25314301Vmm3_mvariable multisystem mineralization 3, lung (mouse)73760000072400000Mouse
25314303Vmm4_mvariable multisystem mineralization 4, kidney (mouse)73760000087400000Mouse
1300878Skts1_mskin tumor susceptibility 1 (mouse)Not determined73824163872241834Mouse
10402488Dipa2_mdrug induced psychomotor activation 2 (mouse)Not determined73877180072771936Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined740024463103860803Mouse
4141929Chlq18_mcirculating hormone level QTL 18 (mouse)Not determined74149907275499217Mouse
11252140Fdr1_mfat response to dietary restriction 1 (mouse)74149907275499217Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745512542119094307Mouse
12880417V125Dq5_mvitamin D active form serum level QTL 5 (mouse)74560000079600000Mouse
25314302Vmm2_mvariable multisystem mineralization 2, heart (mouse)74750000074500000Mouse
1302141Fcsa6_mfemoral cross-sectional area 6 (mouse)Not determined74873471382734859Mouse
11532741Tbrs5_mtuberculosis resistance 5 (mouse)74950947983586207Mouse
1357752Tabw_mtally ho asscoiated body weight (mouse)Not determined74954353083543642Mouse
10054064Bwq11_mbody weight QTL 11 (mouse)Not determined75147520685475345Mouse
10053685Eae43_mexperimental allergic encephalomyelitis susceptibility 43 (mouse)Not determined75147520685475345Mouse
13208555Lgth10_mbody length 10 (mouse)752000000126000000Mouse
12880418V125Dq6_mvitamin D active form serum level QTL 6 (mouse)75250000086500000Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753600000143600000Mouse
25823170Hrsq7_mhost response to SARS QTL 7, log titer (mouse)755169841117223580Mouse
11565101Tsve1_mvariable short tail (Tsv) enhancer 1 (mouse)75623976087493512Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)757300000134400000Mouse
1300952Hcs1_mhepatocarcinogenesis susceptibility 1 (mouse)Not determined75767637391676604Mouse
1301465Egrm3_mearly growth rate (mouse)Not determined75767637391676604Mouse
1301663Skull9_mskull morphology 9 (mouse)Not determined75767637391676604Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)762100000121800000Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)762100000124100000Mouse
25314305Vmm6_mvariable multisystem mineralization 6, eye (mouse)762200000103100000Mouse
13506761Tbthq1_mtrabecular bone thickness QTL 1 (mouse)76270000068100000Mouse
1301383Aem2_manti-erythrocyte autoantibody modifier 2 (mouse)Not determined76448567698485905Mouse
26884381Bzwq2_mbi-zygomatic width QTL 2, 5 week (mouse)76560000097300000Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765600000126900000Mouse
13506750Tbthq2_mtrabecular bone thickness QTL 2 (mouse)76601000077900000Mouse
11553865Stmm1c_mskin tumor modifier of MSM 1c (mouse)766139778100139778Mouse
11553866Stmm1d_mskin tumor modifier of MSM 1d (mouse)766139778100139778Mouse
27095937Ulnl7_mulna length 7, 10 week (mouse)76680000098700000Mouse
25314306Micab7_mMicrobial abundance of Bacteroidales Porphyromonadaceae Odoribacter 7 (mouse)76710430771099965Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3946
Count of miRNA genes:808
Interacting mature miRNAs:1070
Transcripts:ENSMUST00000032776, ENSMUST00000072460, ENSMUST00000076325, ENSMUST00000107476, ENSMUST00000133074, ENSMUST00000135493, ENSMUST00000144057, ENSMUST00000156690
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001033713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001291191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001291192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001291195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001291196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001357324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001357325 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006540684 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242191 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152734 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152736 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152737 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152739 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152740 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC120123 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC158751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI849762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK040227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041136 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK052385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK132678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK136368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153751 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC061128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC096598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U30823 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U94423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000032776   ⟹   ENSMUSP00000032776
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl767,234,207 - 67,372,858 (-)Ensembl
RefSeq Acc Id: ENSMUST00000072460   ⟹   ENSMUSP00000138645
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl767,234,147 - 67,372,858 (-)Ensembl
RefSeq Acc Id: ENSMUST00000076325   ⟹   ENSMUSP00000075664
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl767,234,039 - 67,372,858 (-)Ensembl
RefSeq Acc Id: ENSMUST00000107476   ⟹   ENSMUSP00000103100
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl767,231,918 - 67,372,858 (-)Ensembl
RefSeq Acc Id: ENSMUST00000133074   ⟹   ENSMUSP00000116144
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl767,251,809 - 67,372,858 (-)Ensembl
RefSeq Acc Id: ENSMUST00000135493   ⟹   ENSMUSP00000138566
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl767,232,084 - 67,316,920 (-)Ensembl
RefSeq Acc Id: ENSMUST00000144057
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl767,345,592 - 67,372,827 (-)Ensembl
RefSeq Acc Id: ENSMUST00000156690   ⟹   ENSMUSP00000117496
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl767,231,163 - 67,372,858 (-)Ensembl
RefSeq Acc Id: ENSMUST00000207486
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl767,268,154 - 67,316,965 (-)Ensembl
RefSeq Acc Id: ENSMUST00000207715   ⟹   ENSMUSP00000146872
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl767,236,537 - 67,266,162 (-)Ensembl
RefSeq Acc Id: ENSMUST00000207794
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl767,233,833 - 67,268,714 (-)Ensembl
RefSeq Acc Id: ENSMUST00000208823
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl767,289,391 - 67,293,649 (-)Ensembl
RefSeq Acc Id: NM_001033713   ⟹   NP_001028885
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39766,880,911 - 67,022,606 (-)NCBI
GRCm38767,231,163 - 67,372,858 (-)NCBI
MGSCv37774,378,710 - 74,517,744 (-)RGD
Celera764,690,013 - 64,806,488 (-)NCBI
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001291191   ⟹   NP_001278120
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39766,880,911 - 67,022,606 (-)NCBI
GRCm38767,231,163 - 67,372,858 (-)NCBI
Celera764,690,013 - 64,806,488 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001291192   ⟹   NP_001278121
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39766,880,911 - 67,022,606 (-)NCBI
GRCm38767,231,163 - 67,372,858 (-)NCBI
Celera764,690,013 - 64,806,488 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001291195   ⟹   NP_001278124
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39766,880,911 - 67,022,606 (-)NCBI
GRCm38767,231,163 - 67,372,858 (-)NCBI
Celera764,690,013 - 64,806,488 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001291196   ⟹   NP_001278125
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39766,880,911 - 67,022,606 (-)NCBI
GRCm38767,231,163 - 67,372,858 (-)NCBI
Celera764,690,013 - 64,806,488 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001357324   ⟹   NP_001344253
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39766,880,911 - 67,022,606 (-)NCBI
GRCm38767,231,163 - 67,372,858 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001357325   ⟹   NP_001344254
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39766,880,911 - 67,022,606 (-)NCBI
GRCm38767,231,163 - 67,372,858 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006540684   ⟹   XP_006540747
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39766,880,993 - 67,026,435 (-)NCBI
GRCm38767,231,165 - 67,376,456 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030242191   ⟹   XP_030098051
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39766,880,913 - 67,026,435 (-)NCBI
GRCm38767,231,165 - 67,376,456 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152734   ⟹   XP_036008627
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39766,880,993 - 67,026,435 (-)NCBI
RefSeq Acc Id: XM_036152735   ⟹   XP_036008628
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39766,880,913 - 67,026,435 (-)NCBI
RefSeq Acc Id: XM_036152736   ⟹   XP_036008629
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39766,880,913 - 66,980,720 (-)NCBI
RefSeq Acc Id: XM_036152737   ⟹   XP_036008630
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39766,880,993 - 67,022,099 (-)NCBI
RefSeq Acc Id: XM_036152738   ⟹   XP_036008631
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39766,880,913 - 67,022,230 (-)NCBI
RefSeq Acc Id: XM_036152739   ⟹   XP_036008632
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39766,880,913 - 66,945,150 (-)NCBI
RefSeq Acc Id: XM_036152740   ⟹   XP_036008633
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39766,880,913 - 67,026,435 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_001028885   ⟸   NM_001033713
- Peptide Label: isoform a
- UniProtKB: Q60929 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006540747   ⟸   XM_006540684
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001278124   ⟸   NM_001291195
- Peptide Label: isoform c
- UniProtKB: Q60929 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001278125   ⟸   NM_001291196
- Peptide Label: isoform d
- UniProtKB: Q60929 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001278120   ⟸   NM_001291191
- Peptide Label: isoform b
- UniProtKB: Q60929 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001278121   ⟸   NM_001291192
- Peptide Label: isoform b
- UniProtKB: Q60929 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001344253   ⟸   NM_001357324
- Peptide Label: isoform e
RefSeq Acc Id: NP_001344254   ⟸   NM_001357325
- Peptide Label: isoform a
RefSeq Acc Id: XP_030098051   ⟸   XM_030242191
- Peptide Label: isoform X3
RefSeq Acc Id: ENSMUSP00000032776   ⟸   ENSMUST00000032776
RefSeq Acc Id: ENSMUSP00000116144   ⟸   ENSMUST00000133074
RefSeq Acc Id: ENSMUSP00000103100   ⟸   ENSMUST00000107476
RefSeq Acc Id: ENSMUSP00000138645   ⟸   ENSMUST00000072460
RefSeq Acc Id: ENSMUSP00000075664   ⟸   ENSMUST00000076325
RefSeq Acc Id: ENSMUSP00000138566   ⟸   ENSMUST00000135493
RefSeq Acc Id: ENSMUSP00000146872   ⟸   ENSMUST00000207715
RefSeq Acc Id: ENSMUSP00000117496   ⟸   ENSMUST00000156690
RefSeq Acc Id: XP_036008633   ⟸   XM_036152740
- Peptide Label: isoform X5
RefSeq Acc Id: XP_036008628   ⟸   XM_036152735
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036008631   ⟸   XM_036152738
- Peptide Label: isoform X3
RefSeq Acc Id: XP_036008629   ⟸   XM_036152736
- Peptide Label: isoform X2
RefSeq Acc Id: XP_036008632   ⟸   XM_036152739
- Peptide Label: isoform X4
RefSeq Acc Id: XP_036008627   ⟸   XM_036152734
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036008630   ⟸   XM_036152737
- Peptide Label: isoform X1
Protein Domains
MADS-box

Promoters
RGD ID:8664397
Promoter ID:EPDNEW_M10229
Type:single initiation site
Name:Mef2a_2
Description:Mus musculus myocyte enhancer factor 2A , transcript variant7, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M10230  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38767,335,253 - 67,335,313EPDNEW
RGD ID:8664399
Promoter ID:EPDNEW_M10230
Type:initiation region
Name:Mef2a_1
Description:Mus musculus myocyte enhancer factor 2A , transcript variant7, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M10229  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38767,372,829 - 67,372,889EPDNEW
RGD ID:6841512
Promoter ID:MM_KWN:50977
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:MEF_B6
Transcripts:OTTMUST00000050026
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36774,461,096 - 74,461,596 (-)MPROMDB
RGD ID:6841513
Promoter ID:MM_KWN:50978
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000107476,   OTTMUST00000050021,   OTTMUST00000050025,   OTTMUST00000050027,   UC009HIG.1,   UC009HII.1,   UC009HIJ.1,   UC009HIL.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36774,517,646 - 74,518,532 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:99532 AgrOrtholog
Ensembl Genes ENSMUSG00000030557 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000032776 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000075664 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000103100 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000116144 UniProtKB/TrEMBL
  ENSMUSP00000117496 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000138566 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000138645 UniProtKB/TrEMBL
  ENSMUSP00000146872 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000032776 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000072460 UniProtKB/TrEMBL
  ENSMUST00000076325 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000107476 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000133074 UniProtKB/TrEMBL
  ENSMUST00000135493 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000156690 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000207715 UniProtKB/TrEMBL
Gene3D-CATH 3.40.1810.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro HJURP_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MADS_MEF2-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TF_MADSbox UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TF_MADSbox_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:17258 UniProtKB/Swiss-Prot
MGD MGI:99532 ENTREZGENE
NCBI Gene 17258 ENTREZGENE
Pfam HJURP_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SRF-TF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Mef2a PhenoGen
PRINTS MADSDOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE MADS_BOX_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MADS_BOX_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART MADS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF55455 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A140LIL7_MOUSE UniProtKB/TrEMBL
  D3Z6M5_MOUSE UniProtKB/TrEMBL
  MEF2A_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  S4R2H4_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q3V155 UniProtKB/Swiss-Prot
  Q4VA09 UniProtKB/Swiss-Prot
  Q6P8Q3 UniProtKB/Swiss-Prot