MEF2A (myocyte enhancer factor 2A) - Rat Genome Database
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Gene: MEF2A (myocyte enhancer factor 2A) Pan paniscus
Analyze
Symbol: MEF2A
Name: myocyte enhancer factor 2A
RGD ID: 11851398
Description: ENCODES a protein that exhibits activating transcription factor binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN cardiac conduction (ortholog); cellular response to calcium ion (ortholog); cellular response to glucose stimulus (ortholog); ASSOCIATED WITH Coronary Artery Disease, Autosomal Dominant 1 (ortholog); dilated cardiomyopathy (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Also known as: myocyte-specific enhancer factor 2A
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11597,428,808 - 97,579,092 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1597,428,744 - 97,579,092 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01578,246,439 - 78,396,720 (+)NCBIMhudiblu_PPA_v0panPan3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

Genomics

Comparative Map Data
MEF2A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11597,428,808 - 97,579,092 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1597,428,744 - 97,579,092 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01578,246,439 - 78,396,720 (+)NCBIMhudiblu_PPA_v0panPan3
MEF2A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1599,565,417 - 99,716,466 (+)EnsemblGRCh38hg38GRCh38
GRCh381599,565,417 - 99,716,488 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3715100,106,133 - 100,256,688 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361597,956,185 - 98,071,524 (+)NCBINCBI36hg18NCBI36
Build 341597,956,184 - 98,071,524NCBI
Celera1576,525,015 - 76,675,549 (+)NCBI
Cytogenetic Map15q26.3NCBI
HuRef1576,235,794 - 76,386,442 (+)NCBIHuRef
CHM1_11599,947,526 - 100,098,006 (+)NCBICHM1_1
Mef2a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39766,880,911 - 67,026,435 (-)NCBIGRCm39mm39
GRCm38767,231,163 - 67,376,456 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl767,231,163 - 67,372,858 (-)EnsemblGRCm38mm10GRCm38
MGSCv37774,378,710 - 74,517,744 (-)NCBIGRCm37mm9NCBIm37
MGSCv36767,112,774 - 67,251,808 (-)NCBImm8
Celera764,692,674 - 64,806,488 (-)NCBICelera
Cytogenetic Map7CNCBI
cM Map736.72NCBI
Mef2a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01128,207,715 - 128,341,681 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1128,209,971 - 128,341,263 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01129,273,893 - 129,407,071 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.11122,128,377 - 122,183,406 (-)NCBI
Celera1113,052,879 - 113,157,227 (-)NCBICelera
Cytogenetic Map1q22NCBI
Mef2a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541626,953,798 - 27,051,171 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541626,926,753 - 27,051,171 (+)NCBIChiLan1.0ChiLan1.0
MEF2A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl341,015,713 - 41,179,448 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1341,012,103 - 41,177,588 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Mef2a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049364833,837,891 - 3,982,334 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MEF2A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1138,341,153 - 138,511,311 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11138,398,270 - 138,508,639 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21154,615,130 - 154,689,503 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MEF2A
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12918,150,315 - 18,312,975 (+)NCBI
ChlSab1.1 Ensembl2918,150,854 - 18,309,247 (+)Ensembl
Mef2a
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247684,701,734 - 4,852,833 (-)NCBI


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003816764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_003816765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008969867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008969868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014341592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014341593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024925654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024925655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024925656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024925657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024925658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024925659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034939500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034939501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034939503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034939504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide DQ977268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  SSBP01000241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000046934   ⟹   ENSPPAP00000024109
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1597,428,744 - 97,579,092 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000046943   ⟹   ENSPPAP00000024118
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1597,496,022 - 97,579,092 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000046947   ⟹   ENSPPAP00000024122
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1597,496,022 - 97,579,086 (+)Ensembl
RefSeq Acc Id: ENSPPAT00000046954   ⟹   ENSPPAP00000024129
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1597,496,022 - 97,575,446 (+)Ensembl
RefSeq Acc Id: XM_003816764   ⟹   XP_003816812
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11597,429,064 - 97,579,092 (+)NCBI
Mhudiblu_PPA_v01578,246,453 - 78,396,720 (+)NCBI
Sequence:
RefSeq Acc Id: XM_003816765   ⟹   XP_003816813
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11597,429,064 - 97,579,092 (+)NCBI
Mhudiblu_PPA_v01578,246,439 - 78,396,720 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008969867   ⟹   XP_008968115
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11597,428,812 - 97,576,321 (+)NCBI
Mhudiblu_PPA_v01578,246,462 - 78,396,720 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008969868   ⟹   XP_008968116
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11597,428,808 - 97,579,086 (+)NCBI
Mhudiblu_PPA_v01578,246,447 - 78,396,720 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014341592   ⟹   XP_014197078
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11597,428,808 - 97,579,092 (+)NCBI
Mhudiblu_PPA_v01578,246,450 - 78,396,720 (+)NCBI
Sequence:
RefSeq Acc Id: XM_014341593   ⟹   XP_014197079
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11597,428,810 - 97,579,092 (+)NCBI
Mhudiblu_PPA_v01578,246,456 - 78,396,720 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024925654   ⟹   XP_024781422
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11597,428,808 - 97,579,092 (+)NCBI
Mhudiblu_PPA_v01578,246,446 - 78,396,720 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024925655   ⟹   XP_024781423
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11597,428,808 - 97,579,092 (+)NCBI
Mhudiblu_PPA_v01578,246,446 - 78,396,720 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024925656   ⟹   XP_024781424
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11597,429,064 - 97,579,086 (+)NCBI
Mhudiblu_PPA_v01578,246,450 - 78,396,720 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024925657   ⟹   XP_024781425
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11597,428,808 - 97,579,092 (+)NCBI
Mhudiblu_PPA_v01578,246,448 - 78,396,720 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024925658   ⟹   XP_024781426
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11597,428,808 - 97,579,092 (+)NCBI
Mhudiblu_PPA_v01578,246,448 - 78,396,720 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024925659   ⟹   XP_024781427
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.11597,428,809 - 97,579,092 (+)NCBI
Mhudiblu_PPA_v01578,246,452 - 78,396,720 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034939500   ⟹   XP_034795391
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01578,247,208 - 78,396,713 (+)NCBI
RefSeq Acc Id: XM_034939501   ⟹   XP_034795392
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01578,246,450 - 78,396,720 (+)NCBI
RefSeq Acc Id: XM_034939503   ⟹   XP_034795394
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01578,246,450 - 78,396,720 (+)NCBI
RefSeq Acc Id: XM_034939504   ⟹   XP_034795395
RefSeq Status:
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
Mhudiblu_PPA_v01578,246,453 - 78,396,720 (+)NCBI
Reference Sequences
RefSeq Acc Id: XP_008968116   ⟸   XM_008969868
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_014197078   ⟸   XM_014341592
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_014197079   ⟸   XM_014341593
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_008968115   ⟸   XM_008969867
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_003816812   ⟸   XM_003816764
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_003816813   ⟸   XM_003816765
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_024781422   ⟸   XM_024925654
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_024781425   ⟸   XM_024925657
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_024781423   ⟸   XM_024925655
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_024781426   ⟸   XM_024925658
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_024781427   ⟸   XM_024925659
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_024781424   ⟸   XM_024925656
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_034795394   ⟸   XM_034939503
- Peptide Label: isoform X4
RefSeq Acc Id: XP_034795392   ⟸   XM_034939501
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034795395   ⟸   XM_034939504
- Peptide Label: isoform X5
RefSeq Acc Id: XP_034795391   ⟸   XM_034939500
- Peptide Label: isoform X1
RefSeq Acc Id: ENSPPAP00000024118   ⟸   ENSPPAT00000046943
RefSeq Acc Id: ENSPPAP00000024122   ⟸   ENSPPAT00000046947
RefSeq Acc Id: ENSPPAP00000024129   ⟸   ENSPPAT00000046954
RefSeq Acc Id: ENSPPAP00000024109   ⟸   ENSPPAT00000046934
Protein Domains
HJURP_C   MADS-box


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000035128 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSPPAP00000024109 UniProtKB/TrEMBL
  ENSPPAP00000024118 UniProtKB/TrEMBL
  ENSPPAP00000024122 UniProtKB/TrEMBL
  ENSPPAP00000024129 UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000046934 UniProtKB/TrEMBL
  ENSPPAT00000046943 UniProtKB/TrEMBL
  ENSPPAT00000046947 UniProtKB/TrEMBL
  ENSPPAT00000046954 UniProtKB/TrEMBL
Gene3D-CATH 3.40.1810.10 UniProtKB/TrEMBL
InterPro HJURP_C UniProtKB/TrEMBL
  MADS_MEF2-like UniProtKB/TrEMBL
  TF_MADSbox UniProtKB/TrEMBL
  TF_MADSbox_sf UniProtKB/TrEMBL
KEGG Report pps:100989820 UniProtKB/TrEMBL
NCBI Gene MEF2A ENTREZGENE
Pfam HJURP_C UniProtKB/TrEMBL
  SRF-TF UniProtKB/TrEMBL
PRINTS MADSDOMAIN UniProtKB/TrEMBL
PROSITE MADS_BOX_1 UniProtKB/TrEMBL
  MADS_BOX_2 UniProtKB/TrEMBL
SMART MADS UniProtKB/TrEMBL
Superfamily-SCOP SSF55455 UniProtKB/TrEMBL
UniProt A0A2R9B3E7_PANPA UniProtKB/TrEMBL
  A0A2R9B3G6_PANPA UniProtKB/TrEMBL
  A0A2R9BA52_PANPA UniProtKB/TrEMBL
  A0A2R9BA70_PANPA UniProtKB/TrEMBL
  A1YGF0_PANPA UniProtKB/TrEMBL
  A1YGF1_PANPA UniProtKB/TrEMBL
  A1YGF2_PANPA UniProtKB/TrEMBL
  A1YGF3_PANPA UniProtKB/TrEMBL
  A1YGF4_PANPA UniProtKB/TrEMBL