Plin1 (perilipin 1) - Rat Genome Database

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Gene: Plin1 (perilipin 1) Mus musculus
Analyze
Symbol: Plin1
Name: perilipin 1
RGD ID: 736220
MGI Page MGI
Description: Acts upstream of or within cellular response to cold and lipid catabolic process. Located in cytosol and lipid droplet. Is expressed in blood vessel and connective tissue. Human ortholog(s) of this gene implicated in familial partial lipodystrophy type 4 and obesity. Orthologous to human PLIN1 (perilipin 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 6030432J05Rik; lipid droplet-associated protein; P; Peri; perilipin A; perilipin B; perilipin-1; Plin
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39779,370,912 - 79,382,652 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl779,369,966 - 79,382,651 (-)EnsemblGRCm39 Ensembl
GRCm38779,721,164 - 79,732,904 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl779,720,218 - 79,732,903 (-)EnsemblGRCm38mm10GRCm38
MGSCv37786,866,050 - 86,877,662 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36779,594,677 - 79,605,684 (-)NCBIMGSCv36mm8
Celera777,120,535 - 77,132,138 (-)NCBICelera
Cytogenetic Map7D2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(R)-lipoic acid  (EXP)
15-deoxy-Delta(12,14)-prostaglandin J2  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
3,3',5,5'-tetrabromobisphenol A  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (EXP,ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (EXP)
ammonium chloride  (EXP,ISO)
amphetamine  (ISO)
aristolochic acid  (ISO)
benzo[a]pyrene  (ISO)
benzo[b]fluoranthene  (EXP)
beta-D-glucosamine 6-sulfate  (EXP)
bexarotene  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
bucladesine  (EXP)
butanal  (ISO)
Butylbenzyl phthalate  (EXP)
Butylparaben  (EXP)
cadmium dichloride  (EXP,ISO)
celastrol  (EXP)
chlorpyrifos  (EXP)
deoxycholic acid  (EXP)
dexamethasone  (EXP,ISO)
disodium selenite  (ISO)
fenofibrate  (ISO)
fentin hydroxide  (EXP)
glycerol 2-phosphate  (EXP,ISO)
hexadecanoic acid  (EXP)
Indeno[1,2,3-cd]pyrene  (EXP)
indometacin  (ISO)
L-ascorbic acid  (EXP,ISO)
leupeptin  (EXP)
Licarin A  (EXP)
linoleic acid  (EXP)
lipoic acid  (EXP)
lipopolysaccharide  (ISO)
lithium chloride  (EXP)
mono(2-ethylhexyl) phthalate  (EXP)
N-[2-(4-bromocinnamylamino)ethyl]isoquinoline-5-sulfonamide  (EXP)
N-ethyl-N-nitrosourea  (EXP)
N-methylnicotinate  (EXP)
nelfinavir  (EXP)
ochratoxin A  (ISO)
octadecanoic acid  (ISO)
oleic acid  (ISO)
PCB138  (EXP)
pentanal  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
phosphatidylcholine  (EXP)
pioglitazone  (EXP)
propanal  (ISO)
quercetin  (EXP)
quinoxyfen  (EXP)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
silicon dioxide  (EXP)
sodium arsenite  (EXP,ISO)
sotorasib  (ISO)
Tesaglitazar  (ISO)
testosterone  (ISO)
tetrachloromethane  (ISO)
titanium dioxide  (EXP)
trametinib  (ISO)
tributylstannane  (EXP)
trichloroethene  (ISO)
triphenyl phosphate  (EXP,ISO)
triphenylstannane  (EXP)
triptonide  (EXP)
troglitazone  (ISO)
tungsten  (EXP)
valproic acid  (ISO)
XL147  (EXP)
zearalenone  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal adipose tissue physiology  (IAGP)
abnormal blood homeostasis  (IAGP)
abnormal body temperature homeostasis  (IAGP)
abnormal brown adipose tissue morphology  (IAGP)
abnormal brown adipose tissue physiology  (IAGP)
abnormal circulating free fatty acids level  (IAGP)
abnormal circulating ketone body level  (IAGP)
abnormal fat pad morphology  (IAGP)
abnormal glucose homeostasis  (IAGP)
abnormal glycerol level  (IAGP)
abnormal lipolysis  (IAGP)
abnormal liver morphology  (IAGP)
abnormal white adipose tissue mass  (IAGP)
decreased brown adipose tissue amount  (IAGP)
decreased brown fat cell lipid droplet size  (IAGP)
decreased brown fat lipid droplet number  (IAGP)
decreased circulating leptin level  (IAGP)
decreased epididymal fat pad weight  (IAGP)
decreased inguinal fat pad weight  (IAGP)
decreased interscapular fat pad weight  (IAGP)
decreased parametrial fat pad weight  (IAGP)
decreased percent body fat/body weight  (IAGP)
decreased retroperitoneal fat pad weight  (IAGP)
decreased subcutaneous adipose tissue amount  (IAGP)
decreased susceptibility to age related obesity  (IAGP)
decreased susceptibility to diet-induced obesity  (IAGP)
decreased total body fat amount  (IAGP)
decreased total fat pad weight  (IAGP)
decreased white adipose tissue mass  (IAGP)
decreased white fat cell size  (IAGP)
enhanced lipolysis  (IAGP)
impaired adaptive thermogenesis  (IAGP)
impaired glucose tolerance  (IAGP)
impaired lipolysis  (IAGP)
increased circulating insulin level  (IAGP)
increased circulating leptin level  (IAGP)
increased food intake  (IAGP)
increased gastrocnemius weight  (IAGP)
increased lean body mass  (IAGP)
increased oxygen consumption  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Obese subjects carrying the 11482G>A polymorphism at the perilipin locus are resistant to weight loss after dietary energy restriction. Corella D, etal., J Clin Endocrinol Metab. 2005 Sep;90(9):5121-6. Epub 2005 Jun 28.
2. Genes of cholesterol metabolism in human atheroma: overexpression of perilipin and genes promoting cholesterol storage and repression of ABCA1 expression. Forcheron F, etal., Arterioscler Thromb Vasc Biol. 2005 Aug;25(8):1711-7. Epub 2005 Jun 16.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Perilipin ablation results in a lean mouse with aberrant adipocyte lipolysis, enhanced leptin production, and resistance to diet-induced obesity. Tansey JT, etal., Proc Natl Acad Sci U S A 2001 May 22;98(11):6494-9.
11. CGI-58 interacts with perilipin and is localized to lipid droplets. Possible involvement of CGI-58 mislocalization in Chanarin-Dorfman syndrome. Yamaguchi T, etal., J Biol Chem 2004 Jul 16;279(29):30490-7. Epub 2004 May 10.
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11101849   PMID:11217851   PMID:11641724   PMID:11751901   PMID:12407111   PMID:12477932   PMID:12810697   PMID:12832420   PMID:14527948  
PMID:14578284   PMID:14610073   PMID:14704148   PMID:14726448   PMID:15111495   PMID:15197189   PMID:15292255   PMID:15342676   PMID:16141072   PMID:16141073   PMID:16243839   PMID:16448845  
PMID:16571721   PMID:16595669   PMID:16679289   PMID:17114792   PMID:17401109   PMID:17463056   PMID:17488708   PMID:17921437   PMID:18390901   PMID:18393390   PMID:18487449   PMID:18719666  
PMID:18762440   PMID:19299455   PMID:19324970   PMID:19515989   PMID:19797618   PMID:19850935   PMID:20091459   PMID:21103377   PMID:21393244   PMID:21943217   PMID:21944269   PMID:21983901  
PMID:21989031   PMID:22028793   PMID:22609209   PMID:22685330   PMID:22940098   PMID:23204327   PMID:23296636   PMID:23481402   PMID:23734208   PMID:23805974   PMID:23907538   PMID:24706781  
PMID:24727056   PMID:24927580   PMID:25197048   PMID:25351614   PMID:25416668   PMID:25535287   PMID:25677823   PMID:25695774   PMID:25855981   PMID:26220403   PMID:26243869   PMID:26411340  
PMID:26417690   PMID:26521150   PMID:26659641   PMID:26963625   PMID:27185876   PMID:27373682   PMID:27408775   PMID:27807033   PMID:27832861   PMID:28049691   PMID:28111199   PMID:28964716  
PMID:29191637   PMID:29407594   PMID:29579167   PMID:30042231   PMID:30862682   PMID:31246957   PMID:31361546   PMID:31706571   PMID:31980640   PMID:32748596   PMID:33567267   PMID:33732701  
PMID:33846639   PMID:34023333  


Genomics

Comparative Map Data
Plin1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39779,370,912 - 79,382,652 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl779,369,966 - 79,382,651 (-)EnsemblGRCm39 Ensembl
GRCm38779,721,164 - 79,732,904 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl779,720,218 - 79,732,903 (-)EnsemblGRCm38mm10GRCm38
MGSCv37786,866,050 - 86,877,662 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36779,594,677 - 79,605,684 (-)NCBIMGSCv36mm8
Celera777,120,535 - 77,132,138 (-)NCBICelera
Cytogenetic Map7D2NCBI
PLIN1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381589,664,367 - 89,679,367 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl1589,664,367 - 89,679,427 (-)EnsemblGRCh38hg38GRCh38
GRCh371590,207,598 - 90,222,598 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361588,008,602 - 88,023,595 (-)NCBINCBI36Build 36hg18NCBI36
Build 341588,008,601 - 88,023,595NCBI
Celera1566,610,375 - 66,625,424 (-)NCBICelera
Cytogenetic Map15q26.1NCBI
HuRef1566,320,556 - 66,335,605 (-)NCBIHuRef
CHM1_11590,048,432 - 90,063,481 (-)NCBICHM1_1
T2T-CHM13v2.01587,420,250 - 87,435,249 (-)NCBIT2T-CHM13v2.0
Plin1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21133,664,294 - 133,676,854 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1133,664,892 - 133,676,828 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1141,574,304 - 141,586,247 (-)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.01148,743,695 - 148,755,636 (-)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.01141,661,405 - 141,673,342 (-)NCBIRnor_WKY
Rnor_6.01141,458,907 - 141,470,927 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1141,458,181 - 141,471,010 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01142,419,793 - 142,432,199 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41135,497,431 - 135,509,926 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11135,575,836 - 135,588,332 (-)NCBI
Celera1125,728,269 - 125,740,447 (-)NCBICelera
Cytogenetic Map1q31NCBI
Plin1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541615,533,268 - 15,549,772 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541615,538,309 - 15,549,275 (+)NCBIChiLan1.0ChiLan1.0
PLIN1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11587,565,468 - 87,579,467 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1587,565,468 - 87,577,301 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01568,357,815 - 68,375,062 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PLIN1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1352,657,178 - 52,670,573 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl352,658,427 - 52,671,196 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha355,291,156 - 55,304,527 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0353,073,572 - 53,086,957 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl353,074,803 - 53,087,586 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1352,595,775 - 52,609,130 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0352,805,669 - 52,819,039 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0353,145,820 - 53,159,427 (-)NCBIUU_Cfam_GSD_1.0
Plin1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640130,853,950 - 130,877,219 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648315,457,297 - 15,470,350 (-)EnsemblSpeTri2.0
SpeTri2.0NW_00493648315,457,299 - 15,470,674 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLIN1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl755,236,348 - 55,250,797 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1755,237,517 - 55,250,797 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2760,125,368 - 60,142,711 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap7q11-q14NCBI
PLIN1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1298,204,071 - 8,219,974 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl298,202,035 - 8,215,921 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605938,584,169 - 38,609,434 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Plin1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476816,735,905 - 16,760,326 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476816,736,435 - 16,750,150 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:304
Count of miRNA genes:139
Interacting mature miRNAs:143
Transcripts:ENSMUST00000032762, ENSMUST00000178257
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
4141805Sle19_msystematic lupus erythematosus susceptibility 19 (mouse)Not determined3003248581135653Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1301514Rigs1_mradiation induced gastroschisis 1 (mouse)Not determined73628001592394346Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
25314303Vmm4_mvariable multisystem mineralization 4, kidney (mouse)73729942587049208Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined739673887103510010Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
1302141Fcsa6_mfemoral cross-sectional area 6 (mouse)Not determined74838446182384607Mouse
11532741Tbrs5_mtuberculosis resistance 5 (mouse)74915922783235415Mouse
1357752Tabw_mtally ho asscoiated body weight (mouse)Not determined74919327883193390Mouse
10053685Eae43_mexperimental allergic encephalomyelitis susceptibility 43 (mouse)Not determined75112495485125093Mouse
10054064Bwq11_mbody weight QTL 11 (mouse)Not determined75112495485125093Mouse
13208555Lgth10_mbody length 10 (mouse)751649748125599172Mouse
12880418V125Dq6_mvitamin D active form serum level QTL 6 (mouse)75214974886149748Mouse
27226751Femd5_mfemur midshaft diameter 5, 10 week (mouse)753249748143153737Mouse
25823170Hrsq7_mhost response to SARS QTL 7, log titer (mouse)754819589116822815Mouse
11565101Tsve1_mvariable short tail (Tsv) enhancer 1 (mouse)75588950887142720Mouse
27226778Femd11_mfemur midshaft diameter 11, 16 week (mouse)756949748134001729Mouse
1300952Hcs1_mhepatocarcinogenesis susceptibility 1 (mouse)Not determined75732612191326352Mouse
1301465Egrm3_mearly growth rate (mouse)Not determined75732612191326352Mouse
1301663Skull9_mskull morphology 9 (mouse)Not determined75732612191326352Mouse
26884408Bzwq13_mbi-zygomatic width QTL 13, 16 week (mouse)761749748121399223Mouse
27095916Scvln15_msacral vertebrae length 2, 16 week (mouse)761749748123699223Mouse
25314305Vmm6_mvariable multisystem mineralization 6, eye (mouse)761849748102749207Mouse
1301383Aem2_manti-erythrocyte autoantibody modifier 2 (mouse)Not determined76413542498135653Mouse
26884381Bzwq2_mbi-zygomatic width QTL 2, 5 week (mouse)76524974896949207Mouse
26884440Sklq4_mskull length QTL 4, 5 week (mouse)765249748126499172Mouse
11553865Stmm1c_mskin tumor modifier of MSM 1c (mouse)76578898699788986Mouse
11553866Stmm1d_mskin tumor modifier of MSM 1d (mouse)76578898699788986Mouse
27095937Ulnl7_mulna length 7, 10 week (mouse)76644974898349207Mouse
12801463Rta1_mretinal aging 1 (mouse)76716802789089989Mouse
1301826Pgia3_mproteoglycan induced arthritis 3 (mouse)Not determined767290094101290240Mouse
1301784Ses2_msalmonella enteritidis susceptibility 2 (mouse)Not determined767290094101290240Mouse
1300620Pgia21_mproteoglycan induced arthritis 21 (mouse)Not determined767290094101290240Mouse
26884418Bzwq7_mbi-zygomatic width QTL 7, 10 week (mouse)767849748105449207Mouse
27226715Metcl3_mmetatarsal-calcaneal length 3, 5 week (mouse)767849748119499223Mouse
26884444Sklq8_mskull length QTL 8, 10 week (mouse)767849748124199223Mouse
26884451Sklq14_mskull length QTL 14, 16 week (mouse)767849748124999172Mouse
1300654Bomd1_mbone mineral density 1 (mouse)Not determined768365595102365702Mouse
27095907Scvln4_msacral vertebrae length 2, 5 week (mouse)769949748120499223Mouse
1301155Bpq7_mblood pressure QTL 7 (mouse)Not determined770143137104143379Mouse
10043973Obq29_mobesity QTL 29 (mouse)Not determined772263372106263372Mouse
4142319Powg_mpost-ovarectomy weight gain (mouse)Not determined7285710592582163Mouse
27095910Pglq13_mpelvic girdle length QTL 13, 16 week (mouse)773049748125699172Mouse
27095933Ulnl3_mulna length 3, 5 week (mouse)773149748143153737Mouse
11553869Stmm2b_mskin tumor modifier of MSM 2a (mouse)773725965107725965Mouse
4142212Png1_mPostnatal growth 1 (mouse)Not determined7432612192394346Mouse
27226745Metcl9_mmetatarsal-calcaneal length 9, 10 week (mouse)774849748122199223Mouse
27226781Tibl3_mtibia length 3, 5 week (mouse)774849748122199223Mouse
1301566Adip3_madiposity 3 (mouse)Not determined775394215109394346Mouse
14746989Manh62_mmandible shape 62 (mouse)775742528109742528Mouse
26884398Humsd6_mhumerus midshaft diameter 6, 16 week (mouse)778649748136901729Mouse


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000032762   ⟹   ENSMUSP00000032762
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl779,370,912 - 79,382,524 (-)Ensembl
GRCm38.p6 Ensembl779,721,164 - 79,732,776 (-)Ensembl
RefSeq Acc Id: ENSMUST00000178257   ⟹   ENSMUSP00000136996
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl779,370,912 - 79,381,919 (-)Ensembl
GRCm38.p6 Ensembl779,721,164 - 79,732,171 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205413   ⟹   ENSMUSP00000145747
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl779,378,731 - 79,382,651 (-)Ensembl
GRCm38.p6 Ensembl779,728,983 - 79,732,903 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205553   ⟹   ENSMUSP00000145653
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl779,372,129 - 79,373,036 (-)Ensembl
GRCm38.p6 Ensembl779,722,381 - 79,723,288 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205747   ⟹   ENSMUSP00000146198
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl779,376,252 - 79,382,583 (-)Ensembl
GRCm38.p6 Ensembl779,726,504 - 79,732,835 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205915   ⟹   ENSMUSP00000146028
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl779,369,966 - 79,382,535 (-)Ensembl
GRCm38.p6 Ensembl779,720,218 - 79,732,787 (-)Ensembl
RefSeq Acc Id: ENSMUST00000206083   ⟹   ENSMUSP00000146003
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl779,374,831 - 79,379,613 (-)Ensembl
GRCm38.p6 Ensembl779,725,083 - 79,729,865 (-)Ensembl
RefSeq Acc Id: NM_001113471   ⟹   NP_001106942
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39779,370,912 - 79,382,524 (-)NCBI
GRCm38779,721,164 - 79,732,776 (-)NCBI
MGSCv37786,866,050 - 86,877,662 (-)RGD
Celera777,120,535 - 77,132,138 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_175640   ⟹   NP_783571
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39779,370,912 - 79,382,524 (-)NCBI
GRCm38779,721,164 - 79,732,776 (-)NCBI
MGSCv37786,866,050 - 86,877,662 (-)RGD
Celera777,120,535 - 77,132,138 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_011250776   ⟹   XP_011249078
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39779,370,912 - 79,382,652 (-)NCBI
GRCm38779,721,164 - 79,732,904 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_783571   ⟸   NM_175640
- UniProtKB: Q8C0F5 (UniProtKB/Swiss-Prot),   Q8CGN5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001106942   ⟸   NM_001113471
- UniProtKB: Q8C0F5 (UniProtKB/Swiss-Prot),   Q8CGN5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_011249078   ⟸   XM_011250776
- Peptide Label: isoform X1
- UniProtKB: Q8C0F5 (UniProtKB/Swiss-Prot),   Q8CGN5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000136996   ⟸   ENSMUST00000178257
RefSeq Acc Id: ENSMUSP00000032762   ⟸   ENSMUST00000032762
RefSeq Acc Id: ENSMUSP00000146003   ⟸   ENSMUST00000206083
RefSeq Acc Id: ENSMUSP00000146028   ⟸   ENSMUST00000205915
RefSeq Acc Id: ENSMUSP00000146198   ⟸   ENSMUST00000205747
RefSeq Acc Id: ENSMUSP00000145747   ⟸   ENSMUST00000205413
RefSeq Acc Id: ENSMUSP00000145653   ⟸   ENSMUST00000205553

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8CGN5-F1-model_v2 AlphaFold Q8CGN5 1-517 view protein structure

Promoters
RGD ID:8664517
Promoter ID:EPDNEW_M10290
Type:multiple initiation site
Name:Plin1_2
Description:Mus musculus perilipin 1 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M10291  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38779,732,170 - 79,732,230EPDNEW
RGD ID:8664519
Promoter ID:EPDNEW_M10291
Type:initiation region
Name:Plin1_1
Description:Mus musculus perilipin 1 , transcript variant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M10290  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38779,732,781 - 79,732,841EPDNEW
RGD ID:6841781
Promoter ID:MM_KWN:51250
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6
Transcripts:UC009HYW.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36786,874,506 - 86,875,927 (-)MPROMDB
RGD ID:6841782
Promoter ID:MM_KWN:51251
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6
Transcripts:UC009HYU.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36786,876,821 - 86,878,052 (-)MPROMDB
RGD ID:6841783
Promoter ID:MM_KWN:51252
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day4
Transcripts:NM_175640,   UC009HYV.1,   UC009HYX.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36786,877,411 - 86,877,911 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1890505 AgrOrtholog
Ensembl Genes ENSMUSG00000030546 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000032762 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000136996 UniProtKB/Swiss-Prot
  ENSMUSP00000145653.2 UniProtKB/TrEMBL
  ENSMUSP00000145747.2 UniProtKB/TrEMBL
  ENSMUSP00000146003.2 UniProtKB/TrEMBL
  ENSMUSP00000146028 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000146198.2 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000032762 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000178257 UniProtKB/Swiss-Prot
  ENSMUST00000205413.2 UniProtKB/TrEMBL
  ENSMUST00000205553.2 UniProtKB/TrEMBL
  ENSMUST00000205747.2 UniProtKB/TrEMBL
  ENSMUST00000205915 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000206083.2 UniProtKB/TrEMBL
InterPro Perilipin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PLIN1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:103968 UniProtKB/Swiss-Prot
MGD MGI:1890505 ENTREZGENE
NCBI Gene 103968 ENTREZGENE
PANTHER PTHR47138 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Perilipin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Plin1 PhenoGen
PIRSF PAT UniProtKB/Swiss-Prot
UniProt A0A0U1RNP7_MOUSE UniProtKB/TrEMBL
  A0A0U1RNY2_MOUSE UniProtKB/TrEMBL
  A0A0U1RPJ3_MOUSE UniProtKB/TrEMBL
  A0A0U1RQ08_MOUSE UniProtKB/TrEMBL
  PLIN1_MOUSE UniProtKB/Swiss-Prot
  Q8C0F5 ENTREZGENE
  Q8CGN5 ENTREZGENE
UniProt Secondary Q4V9U2 UniProtKB/Swiss-Prot
  Q8C0F5 UniProtKB/Swiss-Prot