Emc10 (ER membrane protein complex subunit 10) - Rat Genome Database

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Gene: Emc10 (ER membrane protein complex subunit 10) Mus musculus
Analyze
Symbol: Emc10
Name: ER membrane protein complex subunit 10
RGD ID: 1618341
MGI Page MGI
Description: Predicted to contribute to membrane insertase activity. Involved in positive regulation of angiogenesis; positive regulation of endothelial cell migration; and positive regulation of endothelial cell proliferation. Located in extracellular region. Is expressed in several structures, including brain; cardiovascular system; genitourinary system; gut; and respiratory system. Orthologous to human EMC10 (ER membrane protein complex subunit 10).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2310044H10Rik; 5430410O10Rik; hematopoietic signal peptide-containing membrane domain-containing protein 1; hypothetical protein LOC69683; Inm02; Mirt; Mirta22; RIKEN cDNA 2310044H10; UPF0510 protein INM02
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39744,139,361 - 44,145,953 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl744,139,361 - 44,145,953 (-)EnsemblGRCm39 Ensembl
GRCm38744,489,937 - 44,496,524 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl744,489,937 - 44,496,529 (-)EnsemblGRCm38mm10GRCm38
MGSCv37751,745,308 - 51,751,883 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36744,358,169 - 44,364,450 (-)NCBIMGSCv36mm8
Celera739,939,859 - 39,946,434 (-)NCBICelera
Cytogenetic Map7B3NCBI
cM Map728.83NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Mouse MP Annotation Import Pipeline RGD automated import pipeline
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12904583   PMID:14610273   PMID:15782199   PMID:16141072   PMID:16141073  
PMID:18554416   PMID:18799693   PMID:21677750   PMID:21873635   PMID:23332760   PMID:24194600   PMID:25849460   PMID:27626380   PMID:28696314   PMID:28931551   PMID:29083321   PMID:29242231  
PMID:29659949   PMID:30550785   PMID:36077468   PMID:36417873   PMID:36443308   PMID:38355793  


Genomics

Comparative Map Data
Emc10
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39744,139,361 - 44,145,953 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl744,139,361 - 44,145,953 (-)EnsemblGRCm39 Ensembl
GRCm38744,489,937 - 44,496,524 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl744,489,937 - 44,496,529 (-)EnsemblGRCm38mm10GRCm38
MGSCv37751,745,308 - 51,751,883 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36744,358,169 - 44,364,450 (-)NCBIMGSCv36mm8
Celera739,939,859 - 39,946,434 (-)NCBICelera
Cytogenetic Map7B3NCBI
cM Map728.83NCBI
EMC10
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381950,476,507 - 50,490,871 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1950,476,400 - 50,490,871 (+)EnsemblGRCh38hg38GRCh38
GRCh371950,979,764 - 50,994,128 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361955,671,548 - 55,678,420 (+)NCBINCBI36Build 36hg18NCBI36
Celera1948,029,877 - 48,036,747 (+)NCBICelera
Cytogenetic Map19q13.33NCBI
HuRef1947,317,584 - 47,324,456 (+)NCBIHuRef
CHM1_11950,981,479 - 50,988,350 (+)NCBICHM1_1
T2T-CHM13v2.01953,563,993 - 53,578,354 (+)NCBIT2T-CHM13v2.0
Emc10
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81104,119,040 - 104,125,409 (-)NCBIGRCr8
mRatBN7.2194,980,260 - 94,988,847 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl194,943,587 - 94,988,847 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1100,367,921 - 100,374,249 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01108,840,569 - 108,846,897 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01102,130,994 - 102,137,322 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01100,495,112 - 100,501,468 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1100,495,119 - 100,501,437 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01101,560,499 - 101,566,862 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4194,967,722 - 94,974,041 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1195,045,832 - 95,052,152 (-)NCBI
Celera189,245,087 - 89,251,415 (-)NCBICelera
Cytogenetic Map1q22NCBI
Emc10
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955559672,039 - 676,473 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955559672,055 - 676,569 (-)NCBIChiLan1.0ChiLan1.0
EMC10
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22056,542,978 - 56,549,842 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11958,463,734 - 58,470,604 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01947,440,309 - 47,447,199 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11956,341,505 - 56,348,394 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1956,341,503 - 56,352,725 (+)Ensemblpanpan1.1panPan2
EMC10
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11106,254,498 - 106,261,212 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1106,236,307 - 106,261,113 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1105,827,559 - 105,834,314 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01106,765,525 - 106,772,280 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1106,764,511 - 106,772,195 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11106,437,585 - 106,444,475 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01106,079,193 - 106,085,948 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01106,919,850 - 106,926,607 (-)NCBIUU_Cfam_GSD_1.0
Emc10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934922,412,714 - 22,420,154 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936889290,605 - 293,718 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936889288,704 - 296,144 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EMC10
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl655,316,468 - 55,322,249 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1655,316,384 - 55,322,251 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2651,165,375 - 51,171,183 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EMC10
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1643,537,612 - 43,544,579 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl643,537,689 - 43,543,435 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607323,525,972 - 23,533,236 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Emc10
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248324,079,515 - 4,084,797 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248324,079,759 - 4,084,880 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Emc10
199 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2158
Count of miRNA genes:577
Interacting mature miRNAs:702
Transcripts:ENSMUST00000008284, ENSMUST00000118515, ENSMUST00000118808, ENSMUST00000123928, ENSMUST00000138328, ENSMUST00000147102, ENSMUST00000150342
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
1558893Spir1_mStreptococcus pneumoniae infection resistance 1 (mouse)Not determined71030579844305936Mouse
10449139Eosn1_meosinophil differential 1 (mouse)71248087746480877Mouse
10449158Eosn3_meosinophil differential 3 (mouse)71248087746480877Mouse
4141566Femwf8_mfemur work to failure 8 (mouse)Not determined1303248547032621Mouse
11522751Cocia17_mcocaine-induced activity, QTL 17 (mouse)71313520447135204Mouse
25314314Sccor1_msynaptonemal complex length to mean MLH1 count ratio 1 (mouse)71333392547349748Mouse
1559016Drsi_mDCC-related Spp1 induction (mouse)Not determined71663729349159331Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
1301622Eae12_msusceptibility to experimental allergic encephalomyelitis 12 (mouse)Not determined71928001553280104Mouse
1301052Bhr6_mbronchial hyperresponsiveness 6 (mouse)Not determined71984225053842367Mouse
12904742Litsq2_mlitter size QTL 2 (mouse)72267388756674033Mouse
1301709Bdt4_mbone density traits 4 (mouse)Not determined72288857256888716Mouse
11354952Pdcc1_mplasmacytoid dentritic cell compartment 1 (mouse)72306653157066531Mouse
1301969Lbw5_mlupus NZB x NZW 5 (mouse)Not determined72684761560851775Mouse
12790989Tgl6_mtriglyceride 6 (mouse)72754054961540549Mouse
4141805Sle19_msystematic lupus erythematosus susceptibility 19 (mouse)Not determined3003248581135653Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1301175Ap7q_malcohol preference 7 QTL (mouse)Not determined73171484565715077Mouse
1300996Aorls2_maortic lesion size 2 (mouse)Not determined73239453266394681Mouse
4142003W3q10_mweight 3 weeks QTL 10 (mouse)Not determined3349772758148965Mouse
4142102Tailq5_mtail length QTL 5 (mouse)Not determined3349772758148965Mouse
4142218W6q17_mweight 6 weeks QTL 17 (mouse)Not determined3349772758148965Mouse
4141909W10q18_mweight 10 weeks QTL 18 (mouse)Not determined3349772758148965Mouse
1357883Epfq5_mepididymal fat pad weight QTL 5 (mouse)Not determined73349772758148965Mouse
1357634Splq7_mspleen weight QTL 7 (mouse)Not determined73349772758148965Mouse
39128210Lwq19_mliver weight QTL 19 (mouse)73349772758148965Mouse
1357469Kidq5_mkidney weight QTL 5 (mouse)Not determined73349772758148965Mouse
1559000Ossc1_mosteosarcoma susceptibility 1 (mouse)Not determined73405302568053223Mouse
38501071Stsl6_mSalmonella typhimurium susceptibility locus 6 (mouse)73419942551149748Mouse
10045622Heal20_mwound healing/regeneration 20 (mouse)Not determined73431688768317043Mouse
1357586Mdmsc3_mmodifier of muscularity 3 (mouse)Not determined73444786968448018Mouse
1301514Rigs1_mradiation induced gastroschisis 1 (mouse)Not determined73628001592394346Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
25314301Vmm3_mvariable multisystem mineralization 3, lung (mouse)73729942572049748Mouse
25314303Vmm4_mvariable multisystem mineralization 4, kidney (mouse)73729942587049208Mouse
1300878Skts1_mskin tumor susceptibility 1 (mouse)Not determined73789138671891582Mouse
10402488Dipa2_mdrug induced psychomotor activation 2 (mouse)Not determined73842154872421684Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined739673887103510010Mouse
11252140Fdr1_mfat response to dietary restriction 1 (mouse)74114882075148965Mouse
4141929Chlq18_mcirculating hormone level QTL 18 (mouse)Not determined74114882075148965Mouse

Markers in Region
RH135163  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38744,490,784 - 44,491,982UniSTSGRCm38
MGSCv37751,746,154 - 51,747,352UniSTSGRCm37
Celera739,940,705 - 39,941,903UniSTS
Cytogenetic Map7B4UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001355107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_197991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006541176 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030242972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003946559 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC149607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169010 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183758 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK205720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK208212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216646 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY761096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY761098 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC020179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY271382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY761533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000118515   ⟹   ENSMUSP00000113141
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,139,535 - 44,145,830 (-)Ensembl
GRCm38.p6 Ensembl744,490,111 - 44,496,406 (-)Ensembl
RefSeq Acc Id: ENSMUST00000118808   ⟹   ENSMUSP00000113509
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,139,361 - 44,145,953 (-)Ensembl
GRCm38.p6 Ensembl744,489,937 - 44,496,529 (-)Ensembl
RefSeq Acc Id: ENSMUST00000123928
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,143,698 - 44,145,821 (-)Ensembl
GRCm38.p6 Ensembl744,494,274 - 44,496,397 (-)Ensembl
RefSeq Acc Id: ENSMUST00000138328   ⟹   ENSMUSP00000116293
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,141,427 - 44,145,852 (-)Ensembl
GRCm38.p6 Ensembl744,492,003 - 44,496,428 (-)Ensembl
RefSeq Acc Id: ENSMUST00000147102
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,140,309 - 44,141,442 (-)Ensembl
GRCm38.p6 Ensembl744,490,885 - 44,492,018 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150342
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,141,159 - 44,145,887 (-)Ensembl
GRCm38.p6 Ensembl744,491,735 - 44,496,463 (-)Ensembl
RefSeq Acc Id: ENSMUST00000239015   ⟹   ENSMUSP00000159045
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,139,362 - 44,145,937 (-)Ensembl
GRCm38.p6 Ensembl744,489,938 - 44,496,513 (-)Ensembl
RefSeq Acc Id: NM_001355107   ⟹   NP_001342036
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,139,362 - 44,145,937 (-)NCBI
GRCm38744,489,938 - 44,496,513 (-)NCBI
Sequence:
RefSeq Acc Id: NM_197991   ⟹   NP_932108
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,139,361 - 44,145,842 (-)NCBI
GRCm38744,489,937 - 44,496,418 (-)NCBI
MGSCv37751,745,308 - 51,751,883 (-)RGD
Celera739,939,859 - 39,946,434 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006541176   ⟹   XP_006541239
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,139,547 - 44,145,953 (-)NCBI
GRCm38744,490,111 - 44,496,524 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030242972   ⟹   XP_030098832
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,139,547 - 44,145,953 (-)NCBI
GRCm38744,490,111 - 44,496,524 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003946559
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,139,547 - 44,145,953 (-)NCBI
GRCm38744,490,111 - 44,496,524 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_932108   ⟸   NM_197991
- Peptide Label: isoform 1 precursor
- UniProtKB: Q8VCD8 (UniProtKB/Swiss-Prot),   Q5UCC5 (UniProtKB/Swiss-Prot),   Q5UCC3 (UniProtKB/Swiss-Prot),   Q3TFU1 (UniProtKB/Swiss-Prot),   Q3TAS6 (UniProtKB/Swiss-Prot),   Q99JJ8 (UniProtKB/Swiss-Prot),   A0A0X1KG67 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006541239   ⟸   XM_006541176
- Peptide Label: isoform X2
- UniProtKB: A0A0X1KG67 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001342036   ⟸   NM_001355107
- Peptide Label: isoform 2 precursor
- UniProtKB: A0A0X1KG67 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030098832   ⟸   XM_030242972
- Peptide Label: isoform X1
- UniProtKB: A0A0X1KG67 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000113141   ⟸   ENSMUST00000118515
RefSeq Acc Id: ENSMUSP00000113509   ⟸   ENSMUST00000118808
RefSeq Acc Id: ENSMUSP00000116293   ⟸   ENSMUST00000138328
RefSeq Acc Id: ENSMUSP00000159045   ⟸   ENSMUST00000239015

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q3TAS6-F1-model_v2 AlphaFold Q3TAS6 1-258 view protein structure

Promoters
RGD ID:8663867
Promoter ID:EPDNEW_M9965
Type:initiation region
Name:Emc10_1
Description:Mus musculus ER membrane protein complex subunit 10 , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38744,496,418 - 44,496,478EPDNEW
RGD ID:6841122
Promoter ID:MM_KWN:50263
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000056413,   ENSMUST00000085440,   ENSMUST00000118808,   NM_028169,   OTTMUST00000079002,   OTTMUST00000079003,   OTTMUST00000079004,   UC009GPP.1,   UC009GPQ.1,   UC009GPR.1,   UC009GPS.1,   UC009GPT.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36751,751,461 - 51,752,077 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1916933 AgrOrtholog
Ensembl Genes ENSMUSG00000008140 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000118515 ENTREZGENE
  ENSMUST00000118515.9 UniProtKB/Swiss-Prot
  ENSMUST00000118808 ENTREZGENE
  ENSMUST00000118808.9 UniProtKB/Swiss-Prot
  ENSMUST00000138328 ENTREZGENE
  ENSMUST00000138328.3 UniProtKB/TrEMBL
  ENSMUST00000239015.2 UniProtKB/TrEMBL
KEGG Report mmu:69683 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1916933 ENTREZGENE
NCBI Gene 69683 ENTREZGENE
PANTHER CHROMATIN COMPLEXES SUBUNIT BAP18-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR21397:SF4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Emc10 PhenoGen
UniProt A0A0X1KG67 ENTREZGENE, UniProtKB/TrEMBL
  D3Z665_MOUSE UniProtKB/TrEMBL
  EMC10_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3TFU1 ENTREZGENE
  Q5UCC3 ENTREZGENE
  Q5UCC5 ENTREZGENE
  Q8VCD8 ENTREZGENE
  Q99JJ8 ENTREZGENE
UniProt Secondary Q3TFU1 UniProtKB/Swiss-Prot
  Q5UCC3 UniProtKB/Swiss-Prot
  Q5UCC5 UniProtKB/Swiss-Prot
  Q8VCD8 UniProtKB/Swiss-Prot
  Q99JJ8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-09-19 Emc10  ER membrane protein complex subunit 10  2310044H10Rik  RIKEN cDNA 2310044H10 gene  Symbol and/or name change 5135510 APPROVED