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Gene: EMC10 (ER membrane protein complex subunit 10) Canis lupus familiaris

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Symbol:

EMC10

Name:

ER membrane protein complex subunit 10

RGD ID:

12348245

Description:

ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN positive regulation of endothelial cell migration (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorder with Dysmorphic Facies and Variable Seizures (ortholog); FOUND IN extracellular region (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

C1H19orf63

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	106,254,498 - 106,261,212 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	106,236,307 - 106,261,113 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	105,827,559 - 105,834,314 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	106,765,525 - 106,772,280 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	106,764,511 - 106,772,195 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	106,437,585 - 106,444,475 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	106,079,193 - 106,085,948 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	106,919,850 - 106,926,607 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

genetic disease (ISO)

intellectual disability (ISO)

Neurodevelopmental Disorder with Dysmorphic Facies and Variable Seizures (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

positive regulation of angiogenesis (IEA)

positive regulation of endothelial cell migration (ISO)

positive regulation of endothelial cell proliferation (IEA)

protein insertion into ER membrane by stop-transfer membrane-anchor sequence (IEA)

tail-anchored membrane protein insertion into ER membrane (IEA)

Cellular Component

EMC complex (IEA)

endoplasmic reticulum (IEA)

endoplasmic reticulum membrane (IEA)

extracellular region (ISO)

membrane (IEA)

Molecular Function

membrane insertase activity (IEA,ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

EMC10
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	106,254,498 - 106,261,212 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	106,236,307 - 106,261,113 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	105,827,559 - 105,834,314 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	106,765,525 - 106,772,280 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	106,764,511 - 106,772,195 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	106,437,585 - 106,444,475 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	106,079,193 - 106,085,948 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	106,919,850 - 106,926,607 (-)	NCBI		UU_Cfam_GSD_1.0

EMC10
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	50,476,507 - 50,490,871 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	50,476,400 - 50,490,871 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	50,979,764 - 50,994,128 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	55,671,548 - 55,678,420 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	19	48,029,877 - 48,036,747 (+)	NCBI		Celera
Cytogenetic Map	19	q13.33	NCBI
HuRef	19	47,317,584 - 47,324,456 (+)	NCBI		HuRef
CHM1_1	19	50,981,479 - 50,988,350 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	53,563,993 - 53,578,354 (+)	NCBI		T2T-CHM13v2.0

Emc10
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	7	44,139,361 - 44,145,953 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	7	44,139,361 - 44,145,953 (-)	Ensembl		GRCm39 Ensembl
GRCm38	7	44,489,937 - 44,496,524 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	7	44,489,937 - 44,496,529 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	7	51,745,308 - 51,751,883 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	7	44,358,169 - 44,364,450 (-)	NCBI		MGSCv36	mm8
Celera	7	39,939,859 - 39,946,434 (-)	NCBI		Celera
Cytogenetic Map	7	B3	NCBI
cM Map	7	28.83	NCBI

Emc10
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	104,119,040 - 104,125,409 (-)	NCBI		GRCr8
mRatBN7.2	1	94,980,260 - 94,988,847 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	94,943,587 - 94,988,847 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	100,367,921 - 100,374,249 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	108,840,569 - 108,846,897 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	102,130,994 - 102,137,322 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	100,495,112 - 100,501,468 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	100,495,119 - 100,501,437 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	101,560,499 - 101,566,862 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	94,967,722 - 94,974,041 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	95,045,832 - 95,052,152 (-)	NCBI
Celera	1	89,245,087 - 89,251,415 (-)	NCBI		Celera
Cytogenetic Map	1	q22	NCBI

Emc10
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955559	672,039 - 676,473 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955559	672,055 - 676,569 (-)	NCBI	ChiLan1.0	ChiLan1.0

EMC10
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	56,542,978 - 56,549,842 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	58,463,734 - 58,470,604 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	47,440,309 - 47,447,199 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	56,341,505 - 56,348,394 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	56,341,503 - 56,352,725 (+)	Ensembl	panpan1.1		panPan2

Emc10
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	22,412,714 - 22,420,154 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936889	290,605 - 293,718 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936889	288,704 - 296,144 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EMC10
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	55,316,468 - 55,322,249 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	55,316,384 - 55,322,251 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	51,165,375 - 51,171,183 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EMC10
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	43,537,612 - 43,544,579 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	43,537,689 - 43,543,435 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666073	23,525,972 - 23,533,236 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Emc10
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624832	4,079,515 - 4,084,797 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624832	4,079,759 - 4,084,880 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in EMC10
37 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038467391	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038467392	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038528089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038528090	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038592386	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038592387	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038656178	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038656179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_541478	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_858228	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000004761 ⟹ ENSCAFP00000004407

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	106,255,415 - 106,261,113 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000064418 ⟹ ENSCAFP00000055406

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	106,236,307 - 106,260,248 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000065685 ⟹ ENSCAFP00000047903

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	106,256,067 - 106,261,113 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000093452 ⟹ ENSCAFP00000062380

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	106,249,754 - 106,261,113 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845029684 ⟹ ENSCAFP00845023315

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	106,764,511 - 106,772,195 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845029713 ⟹ ENSCAFP00845023338

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	106,767,135 - 106,772,195 (-)	Ensembl

RefSeq Acc Id:

XM_038467391 ⟹ XP_038323319

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	106,437,585 - 106,444,475 (-)	NCBI

RefSeq Acc Id:

XM_038467392 ⟹ XP_038323320

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	106,438,874 - 106,444,475 (-)	NCBI

RefSeq Acc Id:

XM_038528089 ⟹ XP_038384017

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	106,919,850 - 106,926,607 (-)	NCBI

RefSeq Acc Id:

XM_038528090 ⟹ XP_038384018

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	106,921,141 - 106,926,607 (-)	NCBI

RefSeq Acc Id:

XM_038592386 ⟹ XP_038448314

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	106,079,193 - 106,085,948 (-)	NCBI

RefSeq Acc Id:

XM_038592387 ⟹ XP_038448315

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	106,080,482 - 106,085,948 (-)	NCBI

RefSeq Acc Id:

XM_038656178 ⟹ XP_038512106

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	106,765,525 - 106,772,280 (-)	NCBI

RefSeq Acc Id:

XM_038656179 ⟹ XP_038512107

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	106,766,814 - 106,772,280 (-)	NCBI

RefSeq Acc Id:

XM_541478 ⟹ XP_541478

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	106,254,498 - 106,261,212 (-)	NCBI
Dog10K_Boxer_Tasha	1	105,827,559 - 105,834,314 (-)	NCBI

Sequence:

show sequence

ACCTAGCTGACGTCAGACCCCGGGAGCGGGAGGGCACTGGTGCGCAGGCGCAAAGAACTGGCGC
GCAGGCGCAAAGAACTGGCGCGCAGGCGCAAAGAACTGGCTCCGGCTCAGGATCACGCCGCTCC
ACAGCGCCCGGCTCGAGCCCGTCCGGGACTAGTGGGAGGGGGTCAAAATGGCGGCGGCCGGTGC
TGTGGTTACTCGGCTGTTCCTGCTCTTGCTGATGGCGGCAGCAGCCCCCAGCCGGGCTCGGGGC
AGTGGCTGCCGGTCCGGGGCCGCTCTGCGAGGGGCAGGAGCAGAAGGTCGAGAGAGTGAGGGCT
GCGGCACCGTGGGGCTGCTGCTGGAGCACTCATTCGAGATCGATGACAGTGCTCACTTTCGGAA
GCGGGGCTCCCTGCTCTGGAACCAGCAGGATGGCACTTTGTCCCTGTCGCAGCGGCAGCTCAAC
GAGGAGGAGCGGGGCCGGCTCCGGGATGTGGCAGCCCTGAATGGCTTATACCGTGTCCGGGTCC
CTCAGCGTCCTGGGGTCCCTGATGGCGCAGAAGCTGGTGGCTACGTTTCCTCTTTTGTCCCCGC
GTGTTCCCTGGTGGAGTCTCACCTGTCAGACCAGCTGACACTGCACGTGGACGTGGCTGGCAAC
GTGGTGGGGGTGTCAGTGGTGACGCACCCCGGGGGTTGCAGGGGCCACGAGGTGGAGGACGTGG
ACCTGGAACTTTTCAACACTTCAGTGCACCTACAGCCGCCCGCCACTGCCCCAGGTCCTGAGAC
AGCCGCCTTCATCGAGCGTCTGGAGATGGAGCAGGCCCAGAAGGCCAAGAACCCCCAGGAACAG
AAGTCCTTTTTCGCCAAATATTGGATGTACATCATTCCCGTCGTCCTGTTCCTCATGATGTCAG
GAGCGCCAGATGCTGGGGGCCAGGGAGGGGGTGGTGGCGGGGGTGGTGGTGGGGGCAGTGGCCG
CTGAGGGGCTGGGGCCTGTCAGATCCCTGGTCCTCTCTCATCCAGGCTACTCCCTTCCTGCCCA
GAGTGCTCCTATCCTTGATCATCCCAAGAAGGATTTGCTAGCTCCTCCCATCTCCATCCCATGA
GGGCAGGAGGACACCCCTCCCCAGGAGTCCTTTCCCTCTGGGTGGATGGGTAACCAGATTCTGG
TGCACCCTTCCTGCCCCTGTGGTCCCTTTGGAGCCCCAAAGACTTCCTCTTGCCCACAGCGTGA
AGCTCAAGCTCCCCTTCCAGCTCTGACCCTGTGTCTGTCCTCCCCACCCCCAAGCCTCATAGTT
TGGGAACATGCCGACTTCTCTCCAGCCTCTGTGCCTTTGTTCGTGGTCCTATCCTGCCTGTCCC
CGGCTGGACTAGATGGTCCTCCTAATTTGTCTGACACTGGATGGGGCCACGCACTTCCCACCTG
TGTGCCCTTGAGGGGCCTGGTACAGAGCAGGTGCAGGCTGGCCCCATTCCTCCCAGCAGCCCTG
CCTTGGGACCCTGCTCTGACCTTTATCTGCCCATGGCTCTGAGCAGGACTTTAGCTTTCCTGCC
CTGTCAGCATGCCAAGCCTTCCATAGGATTTGGGGCATGAAGAAATGGTGTTTTGTTTTGTCTT
TACATTTATTTATTTATTCATGAGAGCGAGAGAGAGAGAGGGAGAGAGAGGCAGAGAGGCAGAG
TCAGAGGCAGGCTCCATACAGGGAGCCCAATGTGGGACTCGATCCCGGATCCCAGGATCACGCC
CTGAGCCGAAGGCAGATGCCCATCCGCTGAGCCACCCAGGTGTCAAGAAATGGTGTTTAAAGTG
AAAACAAAGCAAGCTAACCTTTAGTATAGAGTCAAGGGCCGGATGATATAAATAGAACCCCTTC
CCCTGTCTGGAGTGTCTTCCCTGGGAGGAGGCACCAGGAGAGGACTGCCTGGCCTTTCGTATTT
ATCACCCCCCCCCTTATCTATGTAAAAATATTGACAATATATTGAAATACATCAATGTTTTGAA
AAGGTACAACTTCCAGCAACCAAATCCAACTGTTGATTTGGTTCCAAGGAAGTCCTGCTGTACA
GACTTTATTGAACCTTGCTCTTTGCTTCACACGTTACTCGGAAACACACAGAAGCGGCTGTCAC
GGTCGCTGTAATGCCTGCGTGATGCTCCATGGTGTTTTATGGCAGTTTATTAAACTGTTCCCCA
GATGTTCAACATT

hide sequence

RefSeq Acc Id:

XM_858228 ⟹ XP_863321

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	106,255,748 - 106,261,212 (-)	NCBI
Dog10K_Boxer_Tasha	1	105,828,848 - 105,834,314 (-)	NCBI

Sequence:

show sequence

ACCTAGCTGACGTCAGACCCCGGGAGCGGGAGGGCACTGGTGCGCAGGCGCAAAGAACTGGCGC
GCAGGCGCAAAGAACTGGCGCGCAGGCGCAAAGAACTGGCTCCGGCTCAGGATCACGCCGCTCC
ACAGCGCCCGGCTCGAGCCCGTCCGGGACTAGTGGGAGGGGGTCAAAATGGCGGCGGCCGGTGC
TGTGGTTACTCGGCTGTTCCTGCTCTTGCTGATGGCGGCAGCAGCCCCCAGCCGGGCTCGGGGC
AGTGGCTGCCGGTCCGGGGCCGCTCTGCGAGGGGCAGGAGCAGAAGGTCGAGAGAGTGAGGGCT
GCGGCACCGTGGGGCTGCTGCTGGAGCACTCATTCGAGATCGATGACAGTGCTCACTTTCGGAA
GCGGGGCTCCCTGCTCTGGAACCAGCAGGATGGCACTTTGTCCCTGTCGCAGCGGCAGCTCAAC
GAGGAGGAGCGGGGCCGGCTCCGGGATGTGGCAGCCCTGAATGGCTTATACCGTGTCCGGGTCC
CTCAGCGTCCTGGGGTCCCTGATGGCGCAGAAGCTGGTGGCTACGTTTCCTCTTTTGTCCCCGC
GTGTTCCCTGGTGGAGTCTCACCTGTCAGACCAGCTGACACTGCACGTGGACGTGGCTGGCAAC
GTGGTGGGGGTGTCAGTGGTGACGCACCCCGGGGGTTGCAGGGGCCACGAGGTGGAGGACGTGG
ACCTGGAACTTTTCAACACTTCAGTGCACCTACAGCCGCCCGCCACTGCCCCAGGTCCTGAGAC
AGCCGCCTTCATCGAGCGTCTGGAGATGGAGCAGGCCCAGAAGGCCAAGAACCCCCAGGAACAG
AAGTCCTTTTTCGCCAAATATTGGCACCTCGTCCTCGGGGGGGCCGTGTTGCTCACAGCCCTGC
GTCCTGCTGCCCCGGGGCCCACGCCGCCGCCGCAGGAGGCCTGATGGATGTACATCATTCCCGT
CGTCCTGTTCCTCATGATGTCAGGAGCGCCAGATGCTGGGGGCCAGGGAGGGGGTGGTGGCGGG
GG

hide sequence

Protein Sequences


Protein RefSeqs	XP_038323319	(Get FASTA)	NCBI Sequence Viewer
	XP_038323320	(Get FASTA)	NCBI Sequence Viewer
	XP_038384017	(Get FASTA)	NCBI Sequence Viewer
	XP_038384018	(Get FASTA)	NCBI Sequence Viewer
	XP_038448314	(Get FASTA)	NCBI Sequence Viewer
	XP_038448315	(Get FASTA)	NCBI Sequence Viewer
	XP_038512106	(Get FASTA)	NCBI Sequence Viewer
	XP_038512107	(Get FASTA)	NCBI Sequence Viewer
	XP_541478	(Get FASTA)	NCBI Sequence Viewer
	XP_863321	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000004407.3
	ENSCAFP00000047903.1
	ENSCAFP00030003739.1
	ENSCAFP00030003751.1
	ENSCAFP00040018787.1
	ENSCAFP00040018814.1
	ENSCAFP00845023315
	ENSCAFP00845023315.1
	ENSCAFP00845023338
	ENSCAFP00845023338.1

RefSeq Acc Id:	XP_541478 ⟸ XM_541478
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0M3S3 (UniProtKB/TrEMBL), A0A8C0L189 (UniProtKB/TrEMBL), A0A8I3P0P8 (UniProtKB/TrEMBL), A0A8C0L7F2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAAGAVVTRLFLLLLMAAAAPSRARGSGCRSGAALRGAGAEGRESEGCGTVGLLLEHSFEIDD SAHFRKRGSLLWNQQDGTLSLSQRQLNEEERGRLRDVAALNGLYRVRVPQRPGVPDGAEAGGYV SSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPGGCRGHEVEDVDLELFNTSVHLQPPAT APGPETAAFIERLEMEQAQKAKNPQEQKSFFAKYWMYIIPVVLFLMMSGAPDAGGQGGGGGGGG GGGSGR hide sequence

RefSeq Acc Id:	XP_863321 ⟸ XM_858228
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0M3T3 (UniProtKB/TrEMBL), A0A8I3NVZ8 (UniProtKB/TrEMBL), A0A8C0L7F2 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAAAGAVVTRLFLLLLMAAAAPSRARGSGCRSGAALRGAGAEGRESEGCGTVGLLLEHSFEIDD SAHFRKRGSLLWNQQDGTLSLSQRQLNEEERGRLRDVAALNGLYRVRVPQRPGVPDGAEAGGYV SSFVPACSLVESHLSDQLTLHVDVAGNVVGVSVVTHPGGCRGHEVEDVDLELFNTSVHLQPPAT APGPETAAFIERLEMEQAQKAKNPQEQKSFFAKYWHLVLGGAVLLTALRPAAPGPTPPPQEA hide sequence

Ensembl Acc Id:

ENSCAFP00000055406 ⟸ ENSCAFT00000064418

Ensembl Acc Id:

ENSCAFP00000004407 ⟸ ENSCAFT00000004761

Ensembl Acc Id:

ENSCAFP00000062380 ⟸ ENSCAFT00000093452

Ensembl Acc Id:

ENSCAFP00000047903 ⟸ ENSCAFT00000065685

RefSeq Acc Id:	XP_038323319 ⟸ XM_038467391
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038323320 ⟸ XM_038467392
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038448314 ⟸ XM_038592386
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038448315 ⟸ XM_038592387
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038512106 ⟸ XM_038656178
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0M3S3 (UniProtKB/TrEMBL), A0A8C0L189 (UniProtKB/TrEMBL), A0A8I3P0P8 (UniProtKB/TrEMBL), A0A8C0L7F2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038512107 ⟸ XM_038656179
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0M3T3 (UniProtKB/TrEMBL), A0A8I3NVZ8 (UniProtKB/TrEMBL), A0A8C0L7F2 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038384017 ⟸ XM_038528089
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0L189 (UniProtKB/TrEMBL), A0A8C0L7F2 (UniProtKB/TrEMBL), A0A8C0M3S3 (UniProtKB/TrEMBL), A0A8I3P0P8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038384018 ⟸ XM_038528090
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0L7F2 (UniProtKB/TrEMBL), A0A8C0M3T3 (UniProtKB/TrEMBL), A0A8I3NVZ8 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845023338 ⟸ ENSCAFT00845029713

Ensembl Acc Id:

ENSCAFP00845023315 ⟸ ENSCAFT00845029684

Promoters

RGD ID:

13682176

Promoter ID:

EPDNEW_C245

Type:

multiple initiation site

Name:

EMC10_1

Description:

ER membrane protein complex subunit 10

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	106,261,125 - 106,261,185	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000002973	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030002288	UniProtKB/TrEMBL
	ENSCAFG00040011730	UniProtKB/TrEMBL
	ENSCAFG00845016751	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000004761.5	UniProtKB/TrEMBL
	ENSCAFT00000065685.2	UniProtKB/TrEMBL
	ENSCAFT00030004211.1	UniProtKB/TrEMBL
	ENSCAFT00030004225.1	UniProtKB/TrEMBL
	ENSCAFT00040021643.1	UniProtKB/TrEMBL
	ENSCAFT00040021672.1	UniProtKB/TrEMBL
	ENSCAFT00845029684	ENTREZGENE
	ENSCAFT00845029684.1	UniProtKB/TrEMBL
	ENSCAFT00845029713	ENTREZGENE
	ENSCAFT00845029713.1	UniProtKB/TrEMBL
InterPro	Chrom_ER_Complex_Protein	UniProtKB/TrEMBL
KEGG Report	cfa:484362	UniProtKB/TrEMBL
NCBI Gene	EMC10	ENTREZGENE
PANTHER	CHROMATIN COMPLEXES SUBUNIT BAP18-RELATED	UniProtKB/TrEMBL
	PTHR21397:SF4	UniProtKB/TrEMBL
Pfam	ECM10	UniProtKB/TrEMBL
UniProt	A0A8C0L189	ENTREZGENE
	A0A8C0L7F2	ENTREZGENE
	A0A8C0M3S3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0M3T3	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NVZ8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3P0P8	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:40332	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar

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