Med25 (mediator complex subunit 25) - Rat Genome Database

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Gene: Med25 (mediator complex subunit 25) Mus musculus
Analyze
Symbol: Med25
Name: mediator complex subunit 25
RGD ID: 1553314
MGI Page MGI
Description: Enables nuclear retinoid X receptor binding activity. Acts upstream of or within positive regulation of transcription by RNA polymerase II. Part of transcription regulator complex. Is expressed in central nervous system; incisor; submandibular gland primordium; and tail dorsal root ganglion. Orthologous to human MED25 (mediator complex subunit 25).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2610034E13Rik; 2610529E18Rik; ESTM; ESTM2; mediator of RNA polymerase II transcription subunit 25; mediator of RNA polymerase II transcription, subunit 25 homolog; mediator of RNA polymerase II transcription, subunit 9 homolog; mMED25; X83308
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39744,526,189 - 44,544,771 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl744,526,189 - 44,542,136 (-)EnsemblGRCm39 Ensembl
GRCm38744,876,765 - 44,892,705 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl744,876,765 - 44,892,712 (-)EnsemblGRCm38mm10GRCm38
MGSCv37752,134,756 - 52,147,736 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36744,747,428 - 44,760,409 (-)NCBIMGSCv36mm8
Celera740,329,552 - 40,342,567 (-)NCBICelera
Cytogenetic Map7B3NCBI
cM Map728.95NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. The Mediator complex and transcription regulation. Poss ZC, etal., Crit Rev Biochem Mol Biol. 2013 Nov-Dec;48(6):575-608. doi: 10.3109/10409238.2013.840259. Epub 2013 Oct 3.
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Genetic mapping of 20 novel expressed sequence tags from midgestation mouse embryos suggests chromosomal clustering. Tchernev VT, etal., Genomics 1997 Feb 15;40(1):170-4.
Additional References at PubMed
PMID:7490078   PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11559591   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15782199   PMID:16141072   PMID:16141073  
PMID:17641689   PMID:19290556   PMID:19501082   PMID:20362541   PMID:21267068   PMID:21427722   PMID:21677750   PMID:21873635   PMID:22952853   PMID:27626380   PMID:32968282   PMID:37047128  
PMID:38327785  


Genomics

Comparative Map Data
Med25
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39744,526,189 - 44,544,771 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl744,526,189 - 44,542,136 (-)EnsemblGRCm39 Ensembl
GRCm38744,876,765 - 44,892,705 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl744,876,765 - 44,892,712 (-)EnsemblGRCm38mm10GRCm38
MGSCv37752,134,756 - 52,147,736 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36744,747,428 - 44,760,409 (-)NCBIMGSCv36mm8
Celera740,329,552 - 40,342,567 (-)NCBICelera
Cytogenetic Map7B3NCBI
cM Map728.95NCBI
MED25
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381949,818,289 - 49,840,384 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1949,818,282 - 49,840,383 (+)EnsemblGRCh38hg38GRCh38
GRCh371950,321,546 - 50,343,641 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361955,013,358 - 55,032,049 (+)NCBINCBI36Build 36hg18NCBI36
Build 341955,013,357 - 55,032,049NCBI
Celera1947,190,990 - 47,209,687 (+)NCBICelera
Cytogenetic Map19q13.33NCBI
HuRef1946,697,846 - 46,716,581 (+)NCBIHuRef
CHM1_11950,323,376 - 50,342,077 (+)NCBICHM1_1
T2T-CHM13v2.01952,817,584 - 52,840,522 (+)NCBIT2T-CHM13v2.0
Med25
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81104,496,447 - 104,513,061 (-)NCBIGRCr8
mRatBN7.2195,359,961 - 95,375,827 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl195,360,284 - 95,375,877 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1100,748,078 - 100,760,955 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01109,220,743 - 109,233,620 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01102,511,152 - 102,524,029 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01100,872,240 - 100,887,864 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1100,874,976 - 100,887,853 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01101,936,861 - 101,952,758 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4195,351,526 - 95,364,403 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1195,429,640 - 95,442,595 (-)NCBI
Celera189,624,421 - 89,637,298 (-)NCBICelera
Cytogenetic Map1q22NCBI
Med25
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555591,084,182 - 1,103,143 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555591,085,033 - 1,102,501 (-)NCBIChiLan1.0ChiLan1.0
MED25
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22055,933,021 - 55,955,983 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11957,853,775 - 57,876,771 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01946,831,190 - 46,853,367 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11955,747,445 - 55,765,978 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1955,747,722 - 55,765,942 (+)Ensemblpanpan1.1panPan2
MED25
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11106,723,737 - 106,740,077 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1106,727,141 - 106,740,032 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1106,306,605 - 106,323,010 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01107,244,636 - 107,261,039 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1107,244,582 - 107,261,159 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11106,920,147 - 106,933,101 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01106,558,669 - 106,575,105 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01107,399,164 - 107,415,567 (-)NCBIUU_Cfam_GSD_1.0
Med25
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934921,991,828 - 22,012,964 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366643,609,451 - 3,628,337 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366643,610,004 - 3,629,850 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MED25
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl654,834,316 - 54,852,821 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1654,834,303 - 54,849,539 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2650,563,412 - 50,581,933 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MED25
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1642,979,616 - 42,994,901 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl642,979,674 - 42,994,865 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607322,954,325 - 22,971,979 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Med25
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248324,484,359 - 4,503,863 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248324,483,599 - 4,503,937 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Med25
504 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:214
Count of miRNA genes:195
Interacting mature miRNAs:209
Transcripts:ENSMUST00000003049
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
10449139Eosn1_meosinophil differential 1 (mouse)71248087746480877Mouse
10449158Eosn3_meosinophil differential 3 (mouse)71248087746480877Mouse
4141566Femwf8_mfemur work to failure 8 (mouse)Not determined1303248547032621Mouse
11522751Cocia17_mcocaine-induced activity, QTL 17 (mouse)71313520447135204Mouse
25314314Sccor1_msynaptonemal complex length to mean MLH1 count ratio 1 (mouse)71333392547349748Mouse
1559016Drsi_mDCC-related Spp1 induction (mouse)Not determined71663729349159331Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
1301622Eae12_msusceptibility to experimental allergic encephalomyelitis 12 (mouse)Not determined71928001553280104Mouse
1301052Bhr6_mbronchial hyperresponsiveness 6 (mouse)Not determined71984225053842367Mouse
12904742Litsq2_mlitter size QTL 2 (mouse)72267388756674033Mouse
1301709Bdt4_mbone density traits 4 (mouse)Not determined72288857256888716Mouse
11354952Pdcc1_mplasmacytoid dentritic cell compartment 1 (mouse)72306653157066531Mouse
1301969Lbw5_mlupus NZB x NZW 5 (mouse)Not determined72684761560851775Mouse
12790989Tgl6_mtriglyceride 6 (mouse)72754054961540549Mouse
4141805Sle19_msystematic lupus erythematosus susceptibility 19 (mouse)Not determined3003248581135653Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1301175Ap7q_malcohol preference 7 QTL (mouse)Not determined73171484565715077Mouse
1300996Aorls2_maortic lesion size 2 (mouse)Not determined73239453266394681Mouse
4142003W3q10_mweight 3 weeks QTL 10 (mouse)Not determined3349772758148965Mouse
4142102Tailq5_mtail length QTL 5 (mouse)Not determined3349772758148965Mouse
4142218W6q17_mweight 6 weeks QTL 17 (mouse)Not determined3349772758148965Mouse
4141909W10q18_mweight 10 weeks QTL 18 (mouse)Not determined3349772758148965Mouse
1357883Epfq5_mepididymal fat pad weight QTL 5 (mouse)Not determined73349772758148965Mouse
1357634Splq7_mspleen weight QTL 7 (mouse)Not determined73349772758148965Mouse
39128210Lwq19_mliver weight QTL 19 (mouse)73349772758148965Mouse
1357469Kidq5_mkidney weight QTL 5 (mouse)Not determined73349772758148965Mouse
1559000Ossc1_mosteosarcoma susceptibility 1 (mouse)Not determined73405302568053223Mouse
38501071Stsl6_mSalmonella typhimurium susceptibility locus 6 (mouse)73419942551149748Mouse
10045622Heal20_mwound healing/regeneration 20 (mouse)Not determined73431688768317043Mouse
1357586Mdmsc3_mmodifier of muscularity 3 (mouse)Not determined73444786968448018Mouse
1301514Rigs1_mradiation induced gastroschisis 1 (mouse)Not determined73628001592394346Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
25314301Vmm3_mvariable multisystem mineralization 3, lung (mouse)73729942572049748Mouse
25314303Vmm4_mvariable multisystem mineralization 4, kidney (mouse)73729942587049208Mouse
1300878Skts1_mskin tumor susceptibility 1 (mouse)Not determined73789138671891582Mouse
10402488Dipa2_mdrug induced psychomotor activation 2 (mouse)Not determined73842154872421684Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined739673887103510010Mouse
11252140Fdr1_mfat response to dietary restriction 1 (mouse)74114882075148965Mouse
4141929Chlq18_mcirculating hormone level QTL 18 (mouse)Not determined74114882075148965Mouse
25394571Skmw59_mskeletal muscle weight 59, TA (mouse)74422494344675382Mouse
25394574Skmw61_mskeletal muscle weight 61, EDL (mouse)74422494344675382Mouse

Markers in Region
UniSTS:235660  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38744,877,090 - 44,877,358UniSTSGRCm38
MGSCv37752,132,460 - 52,132,728UniSTSGRCm37
Celera740,327,256 - 40,327,524UniSTS
Cytogenetic Map7B2UniSTS
cM Map77.0UniSTS
D10Mit157.2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map6D1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map18E2UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map7B2UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map14E2.2UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map6C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map8C1UniSTS
Cytogenetic Map18A2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8E2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map18B1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map14C2UniSTS
Cytogenetic Map6A1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map13D2.1UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map17E3UniSTS
Cytogenetic Map11B3UniSTS
Cytogenetic Map1H4UniSTS
Cytogenetic Map6A3UniSTS
Cytogenetic Map5E4-E5UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map13DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map14D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic MapXDUniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map1H2.3UniSTS
Cytogenetic Map7A2UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map15D2UniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map16B2UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map1C4UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9F3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map9A4UniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map1A5UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map6G1UniSTS
Cytogenetic MapXA2UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map9BUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map10A4UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map18A1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map1C2UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map1BUniSTS
Cytogenetic Map17A3.1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map4B1UniSTS
Cytogenetic Map15A2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic Map4A3UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map8A1UniSTS
Cytogenetic Map8A1.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map10B1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map4A1UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map17CUniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map5E3UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map14C1UniSTS
Cytogenetic Map14E5UniSTS
Cytogenetic Map10CUniSTS
Cytogenetic Map18B2UniSTS
Cytogenetic Map2F1UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map17A2UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17B2UniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map9E3.1UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXE3UniSTS
Cytogenetic Map4C4UniSTS
Cytogenetic Map3E3UniSTS
Cytogenetic Map11A4UniSTS
Cytogenetic Map4C5UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map7E1UniSTS
Cytogenetic Map5D-E1UniSTS
Cytogenetic Map5B3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map5A2UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map17E4UniSTS
Cytogenetic Map1G2UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map4D2.1UniSTS
Cytogenetic Map4A5UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map1E3-E4UniSTS
Cytogenetic Map9F1-F3UniSTS
Cytogenetic Map1C1.1UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map12A2UniSTS
Cytogenetic Map17A3-BUniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map14A3UniSTS
Cytogenetic Map5G1.1UniSTS
Cytogenetic MapXF2-F4UniSTS
Cytogenetic Map7D2UniSTS
Cytogenetic Map2F3UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map9F1-F2UniSTS
Cytogenetic Map13A3.2UniSTS
Cytogenetic Map10A2UniSTS
Cytogenetic Map1C1UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map12D3UniSTS
Cytogenetic Map1A3-A5UniSTS
Cytogenetic Map2A2UniSTS
Cytogenetic Map3A1UniSTS
Cytogenetic MapXA3.3UniSTS
Cytogenetic Map16A-B1UniSTS
Cytogenetic Map1D2.3UniSTS
Cytogenetic Map6B2.3UniSTS
Cytogenetic Map2G3UniSTS
Cytogenetic MapXA2-A3.1UniSTS
Cytogenetic Map9A5.3UniSTS
Cytogenetic Map14A2-BUniSTS
Cytogenetic Map8E1-E2UniSTS
Cytogenetic Map8A3UniSTS
Cytogenetic Map1G3-H1UniSTS
Cytogenetic Map8B3-C1UniSTS
Cytogenetic Map19C1UniSTS
Cytogenetic Map8C5UniSTS
Cytogenetic Map8A4UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map14E4UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic MapXF5UniSTS
cM Map1040.0UniSTS
Whitehead Genetic1033.9UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001331206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001331208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001415795 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_029365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006541264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006541265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312366 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243073 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC158231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK012187 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK080608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK089940 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK090026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK148368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158238 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK196756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK212178 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219042 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW495583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031138 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC071206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB524888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000003049   ⟹   ENSMUSP00000003049
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,528,808 - 44,542,136 (-)Ensembl
GRCm38.p6 Ensembl744,879,384 - 44,892,712 (-)Ensembl
RefSeq Acc Id: ENSMUST00000123130
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,533,249 - 44,534,095 (-)Ensembl
GRCm38.p6 Ensembl744,883,825 - 44,884,671 (-)Ensembl
RefSeq Acc Id: ENSMUST00000207196
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,539,138 - 44,541,841 (-)Ensembl
GRCm38.p6 Ensembl744,889,714 - 44,892,417 (-)Ensembl
RefSeq Acc Id: ENSMUST00000207206
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,529,664 - 44,530,732 (-)Ensembl
GRCm38.p6 Ensembl744,880,240 - 44,881,308 (-)Ensembl
RefSeq Acc Id: ENSMUST00000207278   ⟹   ENSMUSP00000146595
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,528,815 - 44,541,843 (-)Ensembl
GRCm38.p6 Ensembl744,879,391 - 44,892,419 (-)Ensembl
RefSeq Acc Id: ENSMUST00000207490   ⟹   ENSMUSP00000146422
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,534,921 - 44,541,294 (-)Ensembl
GRCm38.p6 Ensembl744,885,497 - 44,891,870 (-)Ensembl
RefSeq Acc Id: ENSMUST00000207654   ⟹   ENSMUSP00000146817
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,530,452 - 44,541,831 (-)Ensembl
GRCm38.p6 Ensembl744,881,028 - 44,892,407 (-)Ensembl
RefSeq Acc Id: ENSMUST00000207788   ⟹   ENSMUSP00000147117
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,535,290 - 44,541,842 (-)Ensembl
GRCm38.p6 Ensembl744,885,866 - 44,892,418 (-)Ensembl
RefSeq Acc Id: ENSMUST00000207848   ⟹   ENSMUSP00000146864
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,529,735 - 44,533,563 (-)Ensembl
GRCm38.p6 Ensembl744,880,311 - 44,884,139 (-)Ensembl
RefSeq Acc Id: ENSMUST00000208253   ⟹   ENSMUSP00000146405
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,526,189 - 44,541,815 (-)Ensembl
GRCm38.p6 Ensembl744,876,765 - 44,892,391 (-)Ensembl
RefSeq Acc Id: ENSMUST00000208551   ⟹   ENSMUSP00000146498
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,528,815 - 44,541,790 (-)Ensembl
GRCm38.p6 Ensembl744,879,391 - 44,892,366 (-)Ensembl
RefSeq Acc Id: ENSMUST00000208552
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,530,143 - 44,532,608 (-)Ensembl
GRCm38.p6 Ensembl744,880,719 - 44,883,184 (-)Ensembl
RefSeq Acc Id: ENSMUST00000208556   ⟹   ENSMUSP00000146475
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,534,600 - 44,541,825 (-)Ensembl
GRCm38.p6 Ensembl744,885,176 - 44,892,401 (-)Ensembl
RefSeq Acc Id: ENSMUST00000209191   ⟹   ENSMUSP00000146676
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl744,530,058 - 44,534,134 (-)Ensembl
GRCm38.p6 Ensembl744,880,634 - 44,884,710 (-)Ensembl
RefSeq Acc Id: NM_001331206   ⟹   NP_001318135
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,526,189 - 44,541,842 (-)NCBI
GRCm38744,876,765 - 44,892,424 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001331207   ⟹   NP_001318136
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,526,189 - 44,541,842 (-)NCBI
GRCm38744,876,765 - 44,892,424 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001331208   ⟹   NP_001318137
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,528,810 - 44,541,842 (-)NCBI
GRCm38744,879,384 - 44,892,424 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001415795   ⟹   NP_001402724
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,528,810 - 44,541,842 (-)NCBI
RefSeq Acc Id: NM_029365   ⟹   NP_083641
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,528,810 - 44,541,842 (-)NCBI
GRCm38744,879,384 - 44,892,424 (-)NCBI
MGSCv37752,134,756 - 52,147,736 (-)RGD
Celera740,329,552 - 40,342,567 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006541264   ⟹   XP_006541327
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,526,191 - 44,542,172 (-)NCBI
GRCm38744,876,767 - 44,892,705 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006541265   ⟹   XP_006541328
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,526,189 - 44,541,976 (-)NCBI
GRCm38744,876,765 - 44,892,424 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017312366   ⟹   XP_017167855
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,526,189 - 44,544,771 (-)NCBI
GRCm38744,876,765 - 44,892,705 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017312367   ⟹   XP_017167856
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,526,191 - 44,542,172 (-)NCBI
GRCm38744,876,767 - 44,892,705 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017312368   ⟹   XP_017167857
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,526,189 - 44,541,976 (-)NCBI
GRCm38744,876,765 - 44,892,419 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243066   ⟹   XP_030098926
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,526,189 - 44,542,172 (-)NCBI
GRCm38744,876,765 - 44,892,705 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243067   ⟹   XP_030098927
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,526,189 - 44,541,976 (-)NCBI
GRCm38744,876,765 - 44,892,419 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243068   ⟹   XP_030098928
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,526,189 - 44,541,976 (-)NCBI
GRCm38744,876,765 - 44,892,424 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243069   ⟹   XP_030098929
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,526,191 - 44,541,976 (-)NCBI
GRCm38744,879,384 - 44,892,419 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243070   ⟹   XP_030098930
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,526,191 - 44,541,976 (-)NCBI
GRCm38744,879,384 - 44,892,424 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243071   ⟹   XP_030098931
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,526,191 - 44,541,976 (-)NCBI
GRCm38744,879,384 - 44,892,420 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243072   ⟹   XP_030098932
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,526,191 - 44,541,976 (-)NCBI
GRCm38744,876,767 - 44,892,419 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243073   ⟹   XP_030098933
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,526,191 - 44,541,976 (-)NCBI
GRCm38744,876,767 - 44,892,424 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036153534   ⟹   XP_036009427
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39744,526,189 - 44,541,976 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001318135 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318136 (Get FASTA)   NCBI Sequence Viewer  
  NP_001318137 (Get FASTA)   NCBI Sequence Viewer  
  NP_001402724 (Get FASTA)   NCBI Sequence Viewer  
  NP_083641 (Get FASTA)   NCBI Sequence Viewer  
  XP_006541327 (Get FASTA)   NCBI Sequence Viewer  
  XP_006541328 (Get FASTA)   NCBI Sequence Viewer  
  XP_017167855 (Get FASTA)   NCBI Sequence Viewer  
  XP_017167856 (Get FASTA)   NCBI Sequence Viewer  
  XP_017167857 (Get FASTA)   NCBI Sequence Viewer  
  XP_030098926 (Get FASTA)   NCBI Sequence Viewer  
  XP_030098927 (Get FASTA)   NCBI Sequence Viewer  
  XP_030098928 (Get FASTA)   NCBI Sequence Viewer  
  XP_030098929 (Get FASTA)   NCBI Sequence Viewer  
  XP_030098930 (Get FASTA)   NCBI Sequence Viewer  
  XP_030098931 (Get FASTA)   NCBI Sequence Viewer  
  XP_030098932 (Get FASTA)   NCBI Sequence Viewer  
  XP_030098933 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009427 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH31138 (Get FASTA)   NCBI Sequence Viewer  
  AAH71206 (Get FASTA)   NCBI Sequence Viewer  
  BAE28509 (Get FASTA)   NCBI Sequence Viewer  
  BAE29135 (Get FASTA)   NCBI Sequence Viewer  
  EDL22768 (Get FASTA)   NCBI Sequence Viewer  
  EDL22769 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000003049
  ENSMUSP00000003049.7
  ENSMUSP00000146405
  ENSMUSP00000146405.2
  ENSMUSP00000146422.2
  ENSMUSP00000146475.2
  ENSMUSP00000146498.2
  ENSMUSP00000146595
  ENSMUSP00000146595.2
  ENSMUSP00000146676.2
  ENSMUSP00000146817.2
  ENSMUSP00000146864.3
  ENSMUSP00000147117.2
GenBank Protein Q8VCB2 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_083641   ⟸   NM_029365
- Peptide Label: isoform 1
- UniProtKB: Q3UFQ1 (UniProtKB/Swiss-Prot),   Q3UDX6 (UniProtKB/Swiss-Prot),   Q6IR27 (UniProtKB/Swiss-Prot),   Q8VCB2 (UniProtKB/Swiss-Prot),   A0A140LHQ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006541328   ⟸   XM_006541265
- Peptide Label: isoform X6
- UniProtKB: A0A140LHQ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006541327   ⟸   XM_006541264
- Peptide Label: isoform X5
- UniProtKB: A0A140LHQ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017167855   ⟸   XM_017312366
- Peptide Label: isoform X1
- UniProtKB: A0A140LHQ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017167857   ⟸   XM_017312368
- Peptide Label: isoform X6
- UniProtKB: A0A140LHQ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017167856   ⟸   XM_017312367
- Peptide Label: isoform X4
- UniProtKB: A0A140LHQ0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030098926   ⟸   XM_030243066
- Peptide Label: isoform X2
- UniProtKB: A0A140LHQ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001318136   ⟸   NM_001331207
- Peptide Label: isoform 3
- UniProtKB: A0A140LHG7 (UniProtKB/TrEMBL),   A0A140LHQ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001318135   ⟸   NM_001331206
- Peptide Label: isoform 2
- UniProtKB: A0A140LHQ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030098928   ⟸   XM_030243068
- Peptide Label: isoform X8
RefSeq Acc Id: XP_030098927   ⟸   XM_030243067
- Peptide Label: isoform X7
- UniProtKB: A0A140LHQ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030098933   ⟸   XM_030243073
- Peptide Label: isoform X12
RefSeq Acc Id: XP_030098932   ⟸   XM_030243072
- Peptide Label: isoform X11
RefSeq Acc Id: XP_030098930   ⟸   XM_030243070
- Peptide Label: isoform X10
- UniProtKB: A0A140LHQ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001318137   ⟸   NM_001331208
- Peptide Label: isoform 4
- UniProtKB: Q8VCB2 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_030098931   ⟸   XM_030243071
- Peptide Label: isoform X10
- UniProtKB: A0A140LHQ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030098929   ⟸   XM_030243069
- Peptide Label: isoform X9
- UniProtKB: A0A140LHQ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000146498   ⟸   ENSMUST00000208551
RefSeq Acc Id: ENSMUSP00000146475   ⟸   ENSMUST00000208556
RefSeq Acc Id: ENSMUSP00000003049   ⟸   ENSMUST00000003049
RefSeq Acc Id: ENSMUSP00000146405   ⟸   ENSMUST00000208253
RefSeq Acc Id: ENSMUSP00000146595   ⟸   ENSMUST00000207278
RefSeq Acc Id: ENSMUSP00000146422   ⟸   ENSMUST00000207490
RefSeq Acc Id: ENSMUSP00000146817   ⟸   ENSMUST00000207654
RefSeq Acc Id: ENSMUSP00000146864   ⟸   ENSMUST00000207848
RefSeq Acc Id: ENSMUSP00000147117   ⟸   ENSMUST00000207788
RefSeq Acc Id: ENSMUSP00000146676   ⟸   ENSMUST00000209191
RefSeq Acc Id: XP_036009427   ⟸   XM_036153534
- Peptide Label: isoform X7
- UniProtKB: A0A140LHQ0 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001402724   ⟸   NM_001415795
- Peptide Label: isoform 5
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8VCB2-F1-model_v2 AlphaFold Q8VCB2 1-745 view protein structure

Promoters
RGD ID:8663921
Promoter ID:EPDNEW_M9991
Type:initiation region
Name:Med25_1
Description:Mus musculus mediator complex subunit 25 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38744,892,418 - 44,892,478EPDNEW
RGD ID:6841509
Promoter ID:MM_KWN:50313
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Lung
Transcripts:UC009GRM.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36752,140,656 - 52,141,652 (-)MPROMDB
RGD ID:6841511
Promoter ID:MM_KWN:50314
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000003049,   UC009GRN.1,   UC009GRQ.1,   UC009GRR.1,   UC009GRS.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36752,147,429 - 52,147,929 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1922863 AgrOrtholog
Ensembl Genes ENSMUSG00000002968 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000003049 ENTREZGENE
  ENSMUST00000003049.8 UniProtKB/Swiss-Prot
  ENSMUST00000207278 ENTREZGENE
  ENSMUST00000207278.2 UniProtKB/Swiss-Prot
  ENSMUST00000207490.2 UniProtKB/TrEMBL
  ENSMUST00000207654.2 UniProtKB/TrEMBL
  ENSMUST00000207788.2 UniProtKB/TrEMBL
  ENSMUST00000207848.3 UniProtKB/TrEMBL
  ENSMUST00000208253 ENTREZGENE
  ENSMUST00000208253.2 UniProtKB/TrEMBL
  ENSMUST00000208551.2 UniProtKB/TrEMBL
  ENSMUST00000208556.2 UniProtKB/TrEMBL
  ENSMUST00000209191.2 UniProtKB/TrEMBL
Gene3D-CATH 2.40.290.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Med25_PTOV UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mediator_Med25_SD1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Mediator_Med25_VWA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTOV_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SPIN-DOC_Znf-C2H2 UniProtKB/TrEMBL
  vWFA_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:75613 UniProtKB/Swiss-Prot
MGD MGI:1922863 ENTREZGENE
NCBI Gene 75613 ENTREZGENE
PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR12433 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Med25 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Med25_SD1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Med25_VWA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C2H2_12 UniProtKB/TrEMBL
PhenoGen Med25 PhenoGen
Superfamily-SCOP SSF53300 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A140LHG7 ENTREZGENE, UniProtKB/TrEMBL
  A0A140LHI1_MOUSE UniProtKB/TrEMBL
  A0A140LHM8_MOUSE UniProtKB/TrEMBL
  A0A140LHQ0 ENTREZGENE, UniProtKB/TrEMBL
  A0A140LI51_MOUSE UniProtKB/TrEMBL
  A0A140LIH0_MOUSE UniProtKB/TrEMBL
  A0A140LIL1_MOUSE UniProtKB/TrEMBL
  A0A140LJ84_MOUSE UniProtKB/TrEMBL
  MED25_MOUSE UniProtKB/Swiss-Prot
  Q3UDX6 ENTREZGENE
  Q3UFQ1 ENTREZGENE
  Q6IR27 ENTREZGENE
  Q8VCB2 ENTREZGENE
UniProt Secondary Q3UDX6 UniProtKB/Swiss-Prot
  Q3UFQ1 UniProtKB/Swiss-Prot
  Q6IR27 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-11-26 Med25  mediator complex subunit 25    mediator of RNA polymerase II transcription, subunit 25 homolog (yeast)  Symbol and/or name change 5135510 APPROVED