Fgf21 (fibroblast growth factor 21) - Rat Genome Database

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Gene: Fgf21 (fibroblast growth factor 21) Mus musculus
Analyze
Symbol: Fgf21
Name: fibroblast growth factor 21
RGD ID: 732404
MGI Page MGI
Description: Predicted to enable fibroblast growth factor receptor binding activity and growth factor activity. Involved in positive regulation of cold-induced thermogenesis. Acts upstream of or within positive regulation of MAPKKK cascade by fibroblast growth factor receptor signaling pathway and positive regulation of cell population proliferation. Located in extracellular space. Is expressed in several structures, including adipose tissue; alimentary system; cerebellum; hemolymphoid system; and musculoskeletal system. Orthologous to human FGF21 (fibroblast growth factor 21).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: FGF-21; Fgf8c; fibroblast growth factor 8c
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39745,263,314 - 45,264,914 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl745,263,310 - 45,264,914 (-)EnsemblGRCm39 Ensembl
GRCm38745,613,890 - 45,615,490 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl745,613,886 - 45,615,490 (-)EnsemblGRCm38mm10GRCm38
MGSCv37752,869,260 - 52,870,860 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36735,187,750 - 35,189,350 (-)NCBIMGSCv36mm8
MGSCv36745,481,932 - 45,483,532 (-)NCBIMGSCv36mm8
Celera741,070,177 - 41,081,186 (-)NCBICelera
Cytogenetic Map7B3NCBI
cM Map729.38NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,2-dichloroethane  (EXP)
1,4-dithiothreitol  (EXP,ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrophenol  (EXP)
2-chloroethanol  (EXP)
3,3',4,4',5-pentachlorobiphenyl  (EXP,ISO)
3,3',5,5'-tetrabromobisphenol A  (EXP,ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
6-propyl-2-thiouracil  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
aldehydo-D-glucose  (EXP,ISO)
alpha-cyano-4-hydroxycinnamic acid  (EXP)
amino acid  (EXP)
amiodarone  (EXP)
ammonium chloride  (ISO)
arachidonyl-2'-chloroethylamide  (EXP,ISO)
Aroclor 1254  (EXP)
arsenite(3-)  (ISO)
benzo[a]pyrene  (EXP)
beta-naphthoflavone  (ISO)
bezafibrate  (EXP,ISO)
bis(2-chloroethyl) sulfide  (EXP)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
bleomycin A2  (EXP)
bortezomib  (ISO)
bromobenzene  (ISO)
camostat  (EXP)
cannabidiol  (EXP)
carbon nanotube  (EXP)
chlorohydrocarbon  (ISO)
chlorpyrifos  (EXP)
choline  (EXP)
ciguatoxin CTX1B  (EXP)
cisplatin  (ISO)
Citreoviridin  (EXP,ISO)
cobalt dichloride  (ISO)
corn oil  (ISO)
cyclosporin A  (ISO)
cyhalothrin  (EXP)
D-glucose  (EXP,ISO)
dexamethasone  (EXP,ISO)
diazinon  (ISO)
dibutyl phthalate  (ISO)
dichloroacetic acid  (EXP)
dieldrin  (ISO)
dioxygen  (ISO)
diquat  (EXP)
endosulfan  (ISO)
epalrestat  (EXP)
epoxiconazole  (EXP)
ethanol  (EXP)
famotidine  (ISO)
fenofibrate  (ISO)
fluoranthene  (EXP)
flutamide  (ISO)
folic acid  (EXP)
fructose  (EXP)
furan  (EXP,ISO)
glucagon  (EXP)
glucose  (EXP,ISO)
GW 4064  (EXP)
GW 7647  (ISO)
Heptachlor epoxide  (EXP)
hexadecanoic acid  (ISO)
imidazopyrazole  (ISO)
indole-3-methanol  (ISO)
inulin  (EXP)
L-1,4-dithiothreitol  (EXP,ISO)
L-glutamine  (ISO)
L-methionine  (EXP)
lansoprazole  (ISO)
lead diacetate  (EXP)
lipopolysaccharide  (EXP)
lithium chloride  (ISO)
metformin  (ISO)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
microcystin-LR  (EXP)
mifepristone  (EXP,ISO)
mono(2-ethylhexyl) phthalate  (EXP)
monosodium L-glutamate  (EXP)
Muraglitazar  (ISO)
N-acetyl-L-cysteine  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-methylformamide  (EXP)
N-nitrosodiethylamine  (EXP,ISO)
nefazodone  (ISO)
nickel atom  (ISO)
Nor-9-carboxy-delta9-THC  (ISO)
Octicizer  (EXP)
oleic acid  (ISO)
paracetamol  (EXP,ISO)
PCB138  (EXP)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP)
pioglitazone  (EXP,ISO)
pirinixic acid  (EXP)
pregnenolone 16alpha-carbonitrile  (EXP)
resveratrol  (EXP,ISO)
sirolimus  (EXP)
sodium arsenite  (EXP)
sodium dichromate  (EXP,ISO)
streptozocin  (EXP)
tacrolimus hydrate  (EXP)
tamoxifen  (EXP)
Tesaglitazar  (ISO)
tetrachloroethene  (EXP)
tetrachloromethane  (EXP,ISO)
thapsigargin  (EXP,ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
tributyl phosphate  (EXP)
trichloroethene  (EXP,ISO)
trichostatin A  (EXP,ISO)
trimethyltin  (EXP)
triphenyl phosphate  (EXP)
tris(2-butoxyethyl) phosphate  (EXP)
tris(2-chloroethyl) phosphate  (EXP)
troglitazone  (EXP,ISO)
tunicamycin  (EXP,ISO)
valproic acid  (EXP,ISO)
vanillic acid  (ISO)
very-low-density lipoprotein triglyceride  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal adipose tissue morphology  (IAGP)
abnormal blood homeostasis  (IAGP)
abnormal body weight  (IAGP)
abnormal brown adipose tissue physiology  (IAGP)
abnormal brown adipose tissue thermogenesis  (IAGP)
abnormal brown fat cell morphology  (IAGP)
abnormal circulating free fatty acids level  (IAGP)
abnormal food intake  (IAGP)
abnormal gluconeogenesis  (IAGP)
abnormal glucose homeostasis  (IAGP)
abnormal hypothalamus secretion  (IAGP)
abnormal lipid homeostasis  (IAGP)
abnormal lipid level  (IAGP)
abnormal liver physiology  (IAGP)
abnormal white adipose tissue physiology  (IAGP)
abnormal white fat cell size  (IAGP)
decreased body temperature  (IAGP)
decreased circulating free fatty acids level  (IAGP)
decreased circulating glucose level  (IAGP)
decreased circulating growth hormone level  (IAGP)
decreased circulating insulin-like growth factor I level  (IAGP)
decreased circulating ketone body level  (IAGP)
decreased fatty acids level  (IAGP)
decreased locomotor activity  (IAGP)
decreased oxygen consumption  (IAGP)
decreased physiological sensitivity to xenobiotic  (IAGP)
decreased white adipose tissue amount  (IAGP)
decreased white fat cell size  (IAGP)
enhanced lipolysis  (IAGP)
hepatic steatosis  (IAGP)
hypoglycemia  (IAGP)
impaired adaptive thermogenesis  (IAGP)
impaired glucose tolerance  (IAGP)
impaired lipolysis  (IAGP)
increased body length  (IAGP)
increased body weight  (IAGP)
increased brown adipose tissue amount  (IAGP)
increased circulating cholesterol level  (IAGP)
increased circulating free fatty acids level  (IAGP)
increased circulating glucose level  (IAGP)
increased circulating growth hormone level  (IAGP)
increased circulating insulin level  (IAGP)
increased circulating ketone body level  (IAGP)
increased circulating leptin level  (IAGP)
increased circulating triglyceride level  (IAGP)
increased creatine kinase activity  (IAGP)
increased gonadal fat pad weight  (IAGP)
increased lean body mass  (IAGP)
increased liver glycogen level  (IAGP)
increased liver triglyceride level  (IAGP)
increased liver weight  (IAGP)
increased long bone epiphyseal plate size  (IAGP)
increased total body fat amount  (IAGP)
increased white adipose tissue amount  (IAGP)
increased white fat cell size  (IAGP)
increased width of hypertrophic chondrocyte zone  (IAGP)
long tibia  (IAGP)
no abnormal phenotype detected  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Interaction of glucocorticoids with FXR/FGF19/FGF21-mediated ileum-liver crosstalk. Al-Aqil FA, etal., Biochim Biophys Acta Mol Basis Dis. 2018 Sep;1864(9 Pt B):2927-2937. doi: 10.1016/j.bbadis.2018.06.003. Epub 2018 Jun 6.
2. Glucagon increases circulating fibroblast growth factor 21 independently of endogenous insulin levels: a novel mechanism of glucagon-stimulated lipolysis? Arafat AM, etal., Diabetologia. 2013 Mar;56(3):588-97. doi: 10.1007/s00125-012-2803-y. Epub 2012 Dec 22.
3. Serum fibroblast growth factor-21 levels are associated with carotid atherosclerosis independent of established cardiovascular risk factors. Chow WS, etal., Arterioscler Thromb Vasc Biol. 2013 Oct;33(10):2454-9. doi: 10.1161/ATVBAHA.113.301599. Epub 2013 Jul 25.
4. Serum fibroblast growth factor 21 is associated with renal function and chronic kidney disease in community-dwelling adults. Crasto C, etal., J Am Geriatr Soc. 2012 Apr;60(4):792-3. doi: 10.1111/j.1532-5415.2011.03879.x.
5. miR-22 inhibition reduces hepatic steatosis via FGF21 and FGFR1 induction. Hu Y, etal., JHEP Rep. 2020 Feb 18;2(2):100093. doi: 10.1016/j.jhepr.2020.100093. eCollection 2020 Apr.
6. Fibroblast growth factor 21 reduces the severity of cerulein-induced pancreatitis in mice. Johnson CL, etal., Gastroenterology. 2009 Nov;137(5):1795-804. doi: 10.1053/j.gastro.2009.07.064. Epub 2009 Aug 5.
7. Molecular hydrogen improves obesity and diabetes by inducing hepatic FGF21 and stimulating energy metabolism in db/db mice. Kamimura N, etal., Obesity (Silver Spring). 2011 Jul;19(7):1396-403. doi: 10.1038/oby.2011.6. Epub 2011 Feb 3.
8. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
9. Fibroblast growth factor 21 analogue LY2405319 lowers blood glucose in streptozotocin-induced insulin-deficient diabetic mice by restoring brown adipose tissue function. Kim JH, etal., Diabetes Obes Metab. 2015 Feb;17(2):161-9. doi: 10.1111/dom.12408. Epub 2014 Nov 28.
10. Circulating fibroblast growth factor 21 levels predict progressive kidney disease in subjects with type 2 diabetes and normoalbuminuria. Lee CH, etal., J Clin Endocrinol Metab. 2015 Apr;100(4):1368-75. doi: 10.1210/jc.2014-3465. Epub 2015 Jan 27.
11. FGF-21, a novel metabolic regulator, has a robust neuroprotective role and is markedly elevated in neurons by mood stabilizers. Leng Y, etal., Mol Psychiatry. 2015 Feb;20(2):215-23. doi: 10.1038/mp.2013.192. Epub 2014 Jan 28.
12. MGDs mouse GO annotations MGD data from the GO Consortium
13. Identification of a novel FGF, FGF-21, preferentially expressed in the liver. Nishimura T, etal., Biochim Biophys Acta 2000 Jun 21;1492(1):203-6.
14. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
15. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
16. Fibroblast growth factor 21 protects against cardiac hypertrophy in mice. Planavila A, etal., Nat Commun. 2013;4:2019. doi: 10.1038/ncomms3019.
17. Mouse MP Annotation Import Pipeline RGD automated import pipeline
18. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
19. Recombinant murine fibroblast growth factor 21 ameliorates obesity-related inflammation in monosodium glutamate-induced obesity rats. Wang WF, etal., Endocrine. 2015 May;49(1):119-29. doi: 10.1007/s12020-014-0433-5. Epub 2014 Oct 12.
20. Serum fibroblast growth factor 21 levels are related to subclinical atherosclerosis in patients with type 2 diabetes. Xiao Y, etal., Cardiovasc Diabetol. 2015 Jun 6;14:72. doi: 10.1186/s12933-015-0229-9.
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11165488   PMID:11900978   PMID:12477932   PMID:14517998   PMID:14681479   PMID:15465490   PMID:15489334   PMID:15902306   PMID:16123981  
PMID:16141072   PMID:16141073   PMID:16705021   PMID:16783635   PMID:16818445   PMID:17369397   PMID:17550777   PMID:17550778   PMID:17601491   PMID:17954559   PMID:18064602   PMID:18187602  
PMID:18287559   PMID:18585098   PMID:18835578   PMID:18840432   PMID:18948104   PMID:19063940   PMID:19117008   PMID:19470704   PMID:19541642   PMID:19544582   PMID:19589869   PMID:19819944  
PMID:20018698   PMID:20018895   PMID:20040496   PMID:20097691   PMID:20197053   PMID:20348033   PMID:20424589   PMID:20562862   PMID:20616029   PMID:20660733   PMID:21317437   PMID:21696361  
PMID:21712364   PMID:21767451   PMID:21801806   PMID:21835167   PMID:21846717   PMID:21849508   PMID:21852674   PMID:21873635   PMID:21876757   PMID:21889884   PMID:22067317   PMID:22302939  
PMID:22304921   PMID:22315431   PMID:22338096   PMID:22374976   PMID:22442730   PMID:22474187   PMID:22523080   PMID:22542568   PMID:22661717   PMID:22696219   PMID:23066506   PMID:23073827  
PMID:23202295   PMID:23209629   PMID:23260145   PMID:23283237   PMID:23283977   PMID:23305646   PMID:23305840   PMID:23416071   PMID:23430257   PMID:23499715   PMID:23590285   PMID:23661803  
PMID:23663741   PMID:23663742   PMID:23667629   PMID:23676500   PMID:23874946   PMID:23897951   PMID:23916735   PMID:23933983   PMID:23933984   PMID:24024127   PMID:24067542   PMID:24184811  
PMID:24198358   PMID:24347058   PMID:24398833   PMID:24424044   PMID:24549397   PMID:24564398   PMID:24590984   PMID:24593051   PMID:24670948   PMID:24769090   PMID:24804243   PMID:24848261  
PMID:24885573   PMID:24900988   PMID:24908095   PMID:24914939   PMID:24933399   PMID:24935677   PMID:25008183   PMID:25024372   PMID:25043817   PMID:25055037   PMID:25061558   PMID:25082895  
PMID:25083607   PMID:25124681   PMID:25133427   PMID:25170079   PMID:25176985   PMID:25182532   PMID:25204579   PMID:25242225   PMID:25270507   PMID:25312648   PMID:25369265   PMID:25449271  
PMID:25495872   PMID:25501997   PMID:25537833   PMID:25538153   PMID:25560828   PMID:25614121   PMID:25712519   PMID:25733154   PMID:25736301   PMID:25774553   PMID:25794851   PMID:25811804  
PMID:25823710   PMID:25829453   PMID:25956583   PMID:26040473   PMID:26092866   PMID:26099854   PMID:26124126   PMID:26187667   PMID:26203166   PMID:26220403   PMID:26329882   PMID:26330054  
PMID:26338887   PMID:26456333   PMID:26487695   PMID:26554817   PMID:26634512   PMID:26697751   PMID:26724858   PMID:26724861   PMID:26748348   PMID:26755598   PMID:26769382   PMID:26795437  
PMID:26849944   PMID:26858359   PMID:26872145   PMID:26901091   PMID:26926384   PMID:26936965   PMID:26947074   PMID:26962859   PMID:27002153   PMID:27003131   PMID:27012775   PMID:27184848  
PMID:27226639   PMID:27276443   PMID:27301791   PMID:27391008   PMID:27396336   PMID:27435856   PMID:27445299   PMID:27445980   PMID:27455076   PMID:27470139   PMID:27482056   PMID:27486236  
PMID:27498701   PMID:27505721   PMID:27548521   PMID:27561547   PMID:27574977   PMID:27593966   PMID:27631137   PMID:27681418   PMID:27689697   PMID:27690692   PMID:27693377   PMID:27720451  
PMID:27853148   PMID:27875243   PMID:27966786   PMID:28041926   PMID:28089565   PMID:28096260   PMID:28123933   PMID:28131830   PMID:28131861   PMID:28199304   PMID:28199833   PMID:28223503  
PMID:28336912   PMID:28364022   PMID:28374855   PMID:28380381   PMID:28404815   PMID:28422956   PMID:28466020   PMID:28472473   PMID:28552492   PMID:28591702   PMID:28607005   PMID:28765264  
PMID:28768181   PMID:28811495   PMID:28818950   PMID:28825598   PMID:28844867   PMID:28844880   PMID:28886439   PMID:29077838   PMID:29107287   PMID:29109955   PMID:29192248   PMID:29247651  
PMID:29289645   PMID:29295856   PMID:29348470   PMID:29378327   PMID:29401620   PMID:29414665   PMID:29434210   PMID:29448103   PMID:29472592   PMID:29496444   PMID:29519677   PMID:29634312  
PMID:29657029   PMID:29688375   PMID:29698569   PMID:29702025   PMID:29706566   PMID:29718710   PMID:29719250   PMID:29730296   PMID:29753678   PMID:29925501   PMID:29962431   PMID:29980484  
PMID:29996716   PMID:30017353   PMID:30019838   PMID:30150304   PMID:30157856   PMID:30257975   PMID:30352954   PMID:30389664   PMID:30389665   PMID:30389922   PMID:30582148   PMID:30605666  
PMID:30679672   PMID:30772257   PMID:30772303   PMID:30813227   PMID:30818059   PMID:30840894   PMID:30842568   PMID:30843877   PMID:30888399   PMID:30895728   PMID:31029826   PMID:31121855  
PMID:31167139   PMID:31289229   PMID:31352001   PMID:31361546   PMID:31374856   PMID:31411815   PMID:31413360   PMID:31513948   PMID:31523008   PMID:31586035   PMID:31668386   PMID:31673703  
PMID:31690632   PMID:31701691   PMID:31728756   PMID:31800971   PMID:31848393   PMID:31902865   PMID:31915301   PMID:31918921   PMID:31925461   PMID:32005798   PMID:32042044   PMID:32047920  
PMID:32151974   PMID:32198422   PMID:32227589   PMID:32233059   PMID:32433922   PMID:32497958   PMID:32518324   PMID:32640184   PMID:32724479   PMID:32736697   PMID:32929325   PMID:33021723  
PMID:33073318   PMID:33089625   PMID:33125701   PMID:33135359   PMID:33177640   PMID:33229553   PMID:33295692   PMID:33334822   PMID:33369618   PMID:33577983   PMID:33599110   PMID:33615874  
PMID:33718833   PMID:33751045   PMID:33761350   PMID:33765615   PMID:33785536   PMID:33822771   PMID:33887198   PMID:33944779   PMID:34010646   PMID:34023388   PMID:34151592   PMID:34192547  
PMID:34229476   PMID:34264867   PMID:34326695   PMID:34348145   PMID:34360670   PMID:34406362   PMID:34526227   PMID:34556628   PMID:34608629   PMID:34624498   PMID:34715121   PMID:34732847  
PMID:34773993   PMID:34774847   PMID:34801693   PMID:34830222   PMID:34943840   PMID:34943946   PMID:34957482   PMID:34984826   PMID:35035378   PMID:35108511   PMID:35108517   PMID:35232994  
PMID:35275426   PMID:35303074   PMID:35306755   PMID:35385313   PMID:35385705   PMID:35393401   PMID:35437883   PMID:35488034   PMID:35513431   PMID:35513524   PMID:35592906   PMID:35605662  
PMID:35626717   PMID:35714811   PMID:35733999   PMID:35761156   PMID:35879461   PMID:35931383   PMID:35998055   PMID:36001982   PMID:36034414   PMID:36064109   PMID:36126111   PMID:36134579  
PMID:36243208   PMID:36331598   PMID:36333931   PMID:36434042   PMID:36648330   PMID:36773338   PMID:36841836   PMID:36889282   PMID:37018396   PMID:37022664   PMID:37156793   PMID:37185802  
PMID:37193753   PMID:37309040   PMID:37355753   PMID:37537627   PMID:37657572   PMID:37690164   PMID:37696161   PMID:37722816   PMID:37777009   PMID:37818094   PMID:37834368   PMID:37862975  
PMID:37914970   PMID:37926157   PMID:37935276   PMID:38013040   PMID:38060447   PMID:38238320   PMID:38238383   PMID:38271099   PMID:38316771   PMID:38331907  


Genomics

Comparative Map Data
Fgf21
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39745,263,314 - 45,264,914 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl745,263,310 - 45,264,914 (-)EnsemblGRCm39 Ensembl
GRCm38745,613,890 - 45,615,490 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl745,613,886 - 45,615,490 (-)EnsemblGRCm38mm10GRCm38
MGSCv37752,869,260 - 52,870,860 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36735,187,750 - 35,189,350 (-)NCBIMGSCv36mm8
MGSCv36745,481,932 - 45,483,532 (-)NCBIMGSCv36mm8
Celera741,070,177 - 41,081,186 (-)NCBICelera
Cytogenetic Map7B3NCBI
cM Map729.38NCBI
FGF21
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381948,755,524 - 48,758,330 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1948,755,524 - 48,758,333 (+)EnsemblGRCh38hg38GRCh38
GRCh371949,258,781 - 49,261,587 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361953,951,156 - 53,953,394 (+)NCBINCBI36Build 36hg18NCBI36
Build 341953,951,305 - 53,953,289NCBI
Celera1946,125,436 - 46,127,638 (+)NCBICelera
Cytogenetic Map19q13.33NCBI
HuRef1945,638,191 - 45,640,357 (+)NCBIHuRef
CHM1_11949,261,115 - 49,263,353 (+)NCBICHM1_1
T2T-CHM13v2.01951,749,989 - 51,752,722 (+)NCBIT2T-CHM13v2.0
Fgf21
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81105,219,825 - 105,221,376 (-)NCBIGRCr8
mRatBN7.2196,083,360 - 96,084,911 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl196,083,441 - 96,090,454 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1101,468,930 - 101,470,173 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01109,941,627 - 109,942,870 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01103,232,004 - 103,233,247 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01101,595,579 - 101,596,822 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1101,595,579 - 101,596,822 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01102,674,359 - 102,675,602 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4196,082,475 - 96,083,718 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1196,160,585 - 96,161,829 (-)NCBI
Celera190,337,152 - 90,338,395 (-)NCBICelera
Cytogenetic Map1q22NCBI
Fgf21
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555591,817,110 - 1,820,417 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555591,818,400 - 1,821,423 (-)NCBIChiLan1.0ChiLan1.0
FGF21
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22054,858,680 - 54,863,094 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11956,785,023 - 56,789,078 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01945,755,466 - 45,758,472 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11954,345,966 - 54,347,712 (+)NCBIpanpan1.1PanPan1.1panPan2
FGF21
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11107,571,449 - 107,576,630 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1107,571,446 - 107,573,281 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1107,093,881 - 107,096,319 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01108,096,091 - 108,098,529 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1108,096,198 - 108,097,768 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11107,762,951 - 107,765,389 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01107,409,841 - 107,412,279 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01108,245,446 - 108,247,884 (-)NCBIUU_Cfam_GSD_1.0
Fgf21
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934921,208,545 - 21,210,140 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366642,826,823 - 2,828,330 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366642,826,823 - 2,828,330 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
FGF21
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl654,080,739 - 54,084,601 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1654,082,653 - 54,084,532 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2649,828,972 - 49,831,965 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FGF21
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1642,006,125 - 42,008,749 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl642,006,064 - 42,008,736 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607321,876,517 - 21,879,217 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fgf21
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248325,164,856 - 5,167,370 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248325,165,195 - 5,166,865 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Fgf21
52 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:35
Count of miRNA genes:34
Interacting mature miRNAs:34
Transcripts:ENSMUST00000033099
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
10449139Eosn1_meosinophil differential 1 (mouse)71248087746480877Mouse
10449158Eosn3_meosinophil differential 3 (mouse)71248087746480877Mouse
4141566Femwf8_mfemur work to failure 8 (mouse)Not determined1303248547032621Mouse
11522751Cocia17_mcocaine-induced activity, QTL 17 (mouse)71313520447135204Mouse
25314314Sccor1_msynaptonemal complex length to mean MLH1 count ratio 1 (mouse)71333392547349748Mouse
1559016Drsi_mDCC-related Spp1 induction (mouse)Not determined71663729349159331Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
1301622Eae12_msusceptibility to experimental allergic encephalomyelitis 12 (mouse)Not determined71928001553280104Mouse
1301052Bhr6_mbronchial hyperresponsiveness 6 (mouse)Not determined71984225053842367Mouse
12904742Litsq2_mlitter size QTL 2 (mouse)72267388756674033Mouse
1301709Bdt4_mbone density traits 4 (mouse)Not determined72288857256888716Mouse
11354952Pdcc1_mplasmacytoid dentritic cell compartment 1 (mouse)72306653157066531Mouse
1301969Lbw5_mlupus NZB x NZW 5 (mouse)Not determined72684761560851775Mouse
12790989Tgl6_mtriglyceride 6 (mouse)72754054961540549Mouse
4141805Sle19_msystematic lupus erythematosus susceptibility 19 (mouse)Not determined3003248581135653Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1301175Ap7q_malcohol preference 7 QTL (mouse)Not determined73171484565715077Mouse
1300996Aorls2_maortic lesion size 2 (mouse)Not determined73239453266394681Mouse
4142003W3q10_mweight 3 weeks QTL 10 (mouse)Not determined3349772758148965Mouse
4142102Tailq5_mtail length QTL 5 (mouse)Not determined3349772758148965Mouse
4142218W6q17_mweight 6 weeks QTL 17 (mouse)Not determined3349772758148965Mouse
4141909W10q18_mweight 10 weeks QTL 18 (mouse)Not determined3349772758148965Mouse
1357883Epfq5_mepididymal fat pad weight QTL 5 (mouse)Not determined73349772758148965Mouse
1357634Splq7_mspleen weight QTL 7 (mouse)Not determined73349772758148965Mouse
39128210Lwq19_mliver weight QTL 19 (mouse)73349772758148965Mouse
1357469Kidq5_mkidney weight QTL 5 (mouse)Not determined73349772758148965Mouse
1559000Ossc1_mosteosarcoma susceptibility 1 (mouse)Not determined73405302568053223Mouse
38501071Stsl6_mSalmonella typhimurium susceptibility locus 6 (mouse)73419942551149748Mouse
10045622Heal20_mwound healing/regeneration 20 (mouse)Not determined73431688768317043Mouse
1357586Mdmsc3_mmodifier of muscularity 3 (mouse)Not determined73444786968448018Mouse
1301514Rigs1_mradiation induced gastroschisis 1 (mouse)Not determined73628001592394346Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
25314301Vmm3_mvariable multisystem mineralization 3, lung (mouse)73729942572049748Mouse
25314303Vmm4_mvariable multisystem mineralization 4, kidney (mouse)73729942587049208Mouse
1300878Skts1_mskin tumor susceptibility 1 (mouse)Not determined73789138671891582Mouse
10402488Dipa2_mdrug induced psychomotor activation 2 (mouse)Not determined73842154872421684Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined739673887103510010Mouse
11252140Fdr1_mfat response to dietary restriction 1 (mouse)74114882075148965Mouse
4141929Chlq18_mcirculating hormone level QTL 18 (mouse)Not determined74114882075148965Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
12880417V125Dq5_mvitamin D active form serum level QTL 5 (mouse)74524974879249748Mouse

Markers in Region
06.MMHAP14FLB3.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38745,618,600 - 45,618,782UniSTSGRCm38
MGSCv37752,873,970 - 52,874,152UniSTSGRCm37
Celera741,078,855 - 41,080,312UniSTS
Celera741,080,130 - 41,080,312UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map7B2UniSTS
cM Map723.2UniSTS
Whitehead_YAC7 UniSTS
Fgf21  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38745,614,135 - 45,615,178UniSTSGRCm38
MGSCv37752,869,505 - 52,870,548UniSTSGRCm37
Cytogenetic Map7B2UniSTS
cM Map7 UniSTS
Fgf21  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38745,614,012 - 45,615,469UniSTSGRCm38
MGSCv37752,869,382 - 52,870,839UniSTSGRCm37
Cytogenetic Map7B2UniSTS
Fgf21  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38745,614,148 - 45,615,150UniSTSGRCm38
MGSCv37752,869,518 - 52,870,520UniSTSGRCm37
Cytogenetic Map7B2UniSTS
cM Map7 UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_020013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB025718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC149057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK007574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX149490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX275044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC049592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HC470935 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HC868369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HI949484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571599 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571600 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571612 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571614 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571615 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571617 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571626 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LR130369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000033099   ⟹   ENSMUSP00000033099
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl745,263,310 - 45,264,914 (-)Ensembl
GRCm38.p6 Ensembl745,613,886 - 45,615,490 (-)Ensembl
RefSeq Acc Id: NM_020013   ⟹   NP_064397
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39745,263,314 - 45,264,914 (-)NCBI
GRCm38745,613,890 - 45,615,490 (-)NCBI
MGSCv37752,869,260 - 52,870,860 (-)RGD
Celera741,070,177 - 41,081,186 (-)ENTREZGENE
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_064397   ⟸   NM_020013
- Peptide Label: precursor
- UniProtKB: Q9JJN1 (UniProtKB/Swiss-Prot),   A0A7U3L6A3 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000033099   ⟸   ENSMUST00000033099

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9JJN1-F1-model_v2 AlphaFold Q9JJN1 1-210 view protein structure

Promoters
RGD ID:8664053
Promoter ID:EPDNEW_M10058
Type:single initiation site
Name:Fgf21_1
Description:Mus musculus fibroblast growth factor 21 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38745,615,486 - 45,615,546EPDNEW
RGD ID:6841106
Promoter ID:MM_KWN:50432
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:ENSMUST00000033099
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36752,870,591 - 52,871,091 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1861377 AgrOrtholog
Ensembl Genes ENSMUSG00000030827 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000033099 ENTREZGENE
  ENSMUST00000033099.6 UniProtKB/Swiss-Prot
Gene3D-CATH 2.80.10.50 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro FGF15/19/21 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Fibroblast_GF_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IL1/FGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:56636 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1861377 ENTREZGENE
NCBI Gene 56636 ENTREZGENE
PANTHER PTHR11486 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR11486:SF81 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam FGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Fgf21 PhenoGen
PIRSF FGF-19_FGF-21 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS HBGFFGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IL1HBGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE HBGF_FGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART FGF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50353 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A7U3L6A3 ENTREZGENE, UniProtKB/TrEMBL
  FGF21_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE