Gm5116 (predicted gene 5116) - Rat Genome Database

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Gene: Gm5116 (predicted gene 5116) Mus musculus
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Symbol: Gm5116
Name: predicted gene 5116
RGD ID: 1620447
MGI Page MGI
Description:
Type: protein-coding (Ensembl: processed_pseudogene)
Previously known as: 60S ribosomal protein L23a pseudogene; 60S ribosomal protein L23a-like; EG330689
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39732,195,063 - 32,195,530 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl732,195,063 - 32,195,525 (+)EnsemblGRCm39 Ensembl
GRCm38732,495,638 - 32,496,105 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl732,495,638 - 32,496,100 (+)EnsemblGRCm38mm10GRCm38
MGSCv37733,280,657 - 33,281,124 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36732,204,398 - 32,204,865 (+)NCBIMGSCv36mm8
Celera726,404,288 - 26,404,755 (+)NCBICelera
Cytogenetic Map7B1NCBI
cM Map719.34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model




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Variants in Gm5116
31 total Variants

1 to 10 of 27 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
4141566Femwf8_mfemur work to failure 8 (mouse)Not determined1303248547032621Mouse
1301969Lbw5_mlupus NZB x NZW 5 (mouse)Not determined72684761560851775Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
25314314Sccor1_msynaptonemal complex length to mean MLH1 count ratio 1 (mouse)71333392547349748Mouse
7394747asp3_maudiogenic seizure prone 3 (mouse)Not determined72730579836842367Mouse
12790989Tgl6_mtriglyceride 6 (mouse)72754054961540549Mouse
11522751Cocia17_mcocaine-induced activity, QTL 17 (mouse)71313520447135204Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
4141805Sle19_msystematic lupus erythematosus susceptibility 19 (mouse)Not determined3003248581135653Mouse

1 to 10 of 27 rows





RefSeq Transcripts XM_286083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000187732
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl732,195,063 - 32,195,525 (+)Ensembl
GRCm38.p6 Ensembl732,495,638 - 32,496,100 (+)Ensembl
RefSeq Acc Id: XM_286083   ⟹   XP_286083
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv37733,280,657 - 33,281,124 (+)NCBI
Protein RefSeqs XP_286083 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_286083   ⟸   XM_286083



Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000100751 Ensembl
MGD MGI:3649164 ENTREZGENE
NCBI Gene Gm5116 ENTREZGENE
PhenoGen Gm5116 PhenoGen