Emp3 (epithelial membrane protein 3) - Rat Genome Database

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Gene: Emp3 (epithelial membrane protein 3) Mus musculus
Analyze
Symbol: Emp3
Name: epithelial membrane protein 3
RGD ID: 731842
MGI Page MGI
Description: Predicted to be involved in apoptotic process and bleb assembly. Predicted to be active in plasma membrane. Is expressed in several structures, including cardiovascular system; hemolymphoid system; musculoskeletal system; nervous system; and sensory organ. Orthologous to human EMP3 (epithelial membrane protein 3 (MAM blood group)).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: EMP-3; H-4; H4; hematopoietic neural membrane protein 1; HNMP; HNMP-1; MI-3; MI-35; Ym; Ymp
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39745,567,447 - 45,570,850 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl745,567,447 - 45,570,828 (-)EnsemblGRCm39 Ensembl
GRCm38745,918,023 - 45,921,426 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl745,918,023 - 45,921,404 (-)EnsemblGRCm38mm10GRCm38
MGSCv37753,173,393 - 53,176,796 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36745,786,106 - 45,789,446 (-)NCBIMGSCv36mm8
Celera741,383,035 - 41,386,440 (-)NCBICelera
Cytogenetic Map7B3NCBI
cM Map729.6NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1-dichloroethene  (EXP)
1,2,4-trimethylbenzene  (ISO)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
5-fluorouracil  (EXP)
7,12-dimethyltetraphene  (ISO)
acetamide  (ISO)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (ISO)
ammonium chloride  (ISO)
aristolochic acid A  (ISO)
aristolochic acids  (ISO)
Aroclor 1254  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
avobenzone  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-lapachone  (ISO)
beta-naphthoflavone  (ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
calcitriol  (ISO)
carbon nanotube  (EXP)
chlordecone  (EXP)
chloropicrin  (ISO)
chloroprene  (EXP)
cisplatin  (EXP,ISO)
copper(II) sulfate  (ISO)
Cuprizon  (ISO)
cyclophosphamide  (ISO)
cyclosporin A  (ISO)
diarsenic trioxide  (ISO)
Dibutyl phosphate  (ISO)
dibutyl phthalate  (ISO)
dicrotophos  (ISO)
diuron  (ISO)
doxorubicin  (ISO)
elemental selenium  (ISO)
endosulfan  (ISO)
epoxiconazole  (EXP)
etoposide  (ISO)
fluvastatin  (ISO)
folic acid  (EXP)
gentamycin  (ISO)
hydralazine  (ISO)
indole-3-methanol  (ISO)
iron dichloride  (ISO)
ivermectin  (ISO)
L-ascorbic acid  (ISO)
lidocaine  (ISO)
methyl methanesulfonate  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
nickel atom  (ISO)
ochratoxin A  (ISO)
p-menthan-3-ol  (ISO)
paclitaxel  (ISO)
paracetamol  (EXP,ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
pirinixic acid  (ISO)
quercetin  (ISO)
quinolin-8-ol  (ISO)
Salinomycin  (ISO)
selenium atom  (ISO)
silicon dioxide  (ISO)
sodium arsenite  (ISO)
Soman  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
tert-butyl hydroperoxide  (EXP)
testosterone  (EXP)
tetrachloromethane  (EXP)
tetradecane  (ISO)
thioacetamide  (ISO)
triphenyl phosphate  (ISO)
tunicamycin  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
vitamin E  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
apoptotic process  (IEA,ISO)
bleb assembly  (IEA,ISO)

Cellular Component
plasma membrane  (IBA,IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Characterization of a tumor-associated gene, a member of a novel family of genes encoding membrane glycoproteins. Ben-Porath I and Benvenisty N, Gene 1996 Dec 12;183(1-2):69-75.
2. Chromosomal mapping of Tmp (Emp1), Xmp (Emp2), and Ymp (Emp3), genes encoding membrane proteins related to Pmp22. Ben-Porath I, etal., Genomics 1998 May 1;49(3):443-7.
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9204931   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:12845499   PMID:14610273   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:16926270   PMID:18554416   PMID:21267068   PMID:21873635   PMID:21947380   PMID:29269102   PMID:34321999  


Genomics

Comparative Map Data
Emp3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39745,567,447 - 45,570,850 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl745,567,447 - 45,570,828 (-)EnsemblGRCm39 Ensembl
GRCm38745,918,023 - 45,921,426 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl745,918,023 - 45,921,404 (-)EnsemblGRCm38mm10GRCm38
MGSCv37753,173,393 - 53,176,796 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36745,786,106 - 45,789,446 (-)NCBIMGSCv36mm8
Celera741,383,035 - 41,386,440 (-)NCBICelera
Cytogenetic Map7B3NCBI
cM Map729.6NCBI
EMP3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381948,325,552 - 48,330,553 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1948,321,310 - 48,330,559 (+)EnsemblGRCh38hg38GRCh38
GRCh371948,828,809 - 48,833,810 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361953,520,454 - 53,525,622 (+)NCBINCBI36Build 36hg18NCBI36
Build 341953,520,453 - 53,525,622NCBI
Celera1945,693,863 - 45,699,044 (+)NCBICelera
Cytogenetic Map19q13.33NCBI
HuRef1945,209,377 - 45,214,558 (+)NCBIHuRef
CHM1_11948,830,732 - 48,835,916 (+)NCBICHM1_1
T2T-CHM13v2.01951,319,698 - 51,324,699 (+)NCBIT2T-CHM13v2.0
Emp3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81105,525,086 - 105,528,370 (-)NCBIGRCr8
mRatBN7.2196,388,651 - 96,391,946 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl196,388,652 - 96,391,988 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1101,774,797 - 101,777,974 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01110,246,785 - 110,249,962 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01103,537,150 - 103,540,327 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01101,900,731 - 101,903,948 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1101,900,733 - 101,903,910 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01102,979,695 - 102,982,874 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4196,389,783 - 96,392,960 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1196,467,893 - 96,471,071 (-)NCBI
Celera190,641,302 - 90,644,479 (-)NCBICelera
Cytogenetic Map1q22NCBI
Emp3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555592,117,200 - 2,121,366 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555592,117,200 - 2,121,366 (-)NCBIChiLan1.0ChiLan1.0
EMP3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22054,429,929 - 54,435,117 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11956,356,040 - 56,361,407 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01945,326,302 - 45,331,462 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11953,919,933 - 53,925,147 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1953,919,986 - 53,925,147 (+)Ensemblpanpan1.1panPan2
EMP3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11107,901,778 - 107,905,912 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1107,901,781 - 107,905,619 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1107,423,282 - 107,427,399 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01108,426,213 - 108,430,346 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1108,426,216 - 108,430,232 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11108,092,642 - 108,096,761 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01107,739,405 - 107,743,526 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01108,575,501 - 108,579,626 (-)NCBIUU_Cfam_GSD_1.0
Emp3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934920,850,007 - 20,853,482 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366642,468,269 - 2,471,675 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366642,467,240 - 2,471,672 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
EMP3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl653,757,776 - 53,761,833 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1653,757,513 - 53,761,833 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2649,394,027 - 49,398,349 (+)NCBISscrofa10.2Sscrofa10.2susScr3
EMP3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1641,591,145 - 41,596,723 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl641,591,020 - 41,596,951 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607321,368,887 - 21,374,758 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Emp3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248325,432,166 - 5,436,337 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248325,432,204 - 5,437,514 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Emp3
171 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:472
Count of miRNA genes:223
Interacting mature miRNAs:236
Transcripts:ENSMUST00000038876, ENSMUST00000164119
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314307Mlh1fc2_mMLH1 foci count 2 (mouse)76502999133501729Mouse
4141566Femwf8_mfemur work to failure 8 (mouse)Not determined1303248547032621Mouse
1301969Lbw5_mlupus NZB x NZW 5 (mouse)Not determined72684761560851775Mouse
38501071Stsl6_mSalmonella typhimurium susceptibility locus 6 (mouse)73419942551149748Mouse
1357586Mdmsc3_mmodifier of muscularity 3 (mouse)Not determined73444786968448018Mouse
38501068Tip1_mtuberculosis immunophenotype 1, spleen CFU (mouse)7360299972549748Mouse
39128210Lwq19_mliver weight QTL 19 (mouse)73349772758148965Mouse
11252140Fdr1_mfat response to dietary restriction 1 (mouse)74114882075148965Mouse
25314314Sccor1_msynaptonemal complex length to mean MLH1 count ratio 1 (mouse)71333392547349748Mouse
1357469Kidq5_mkidney weight QTL 5 (mouse)Not determined73349772758148965Mouse
1301082Bbaa16_mB.burgdorferi-associated arthritis 16 (mouse)Not determined736280015116416877Mouse
4142003W3q10_mweight 3 weeks QTL 10 (mouse)Not determined3349772758148965Mouse
12790989Tgl6_mtriglyceride 6 (mouse)72754054961540549Mouse
1559000Ossc1_mosteosarcoma susceptibility 1 (mouse)Not determined73405302568053223Mouse
10043926Bw1n_mbody weight 1 in NSY (mouse)Not determined745161966118693530Mouse
11522751Cocia17_mcocaine-induced activity, QTL 17 (mouse)71313520447135204Mouse
12792978Fbmd3_mfemoral bone mineral density 3, females only (mouse)77050288142367832Mouse
4141805Sle19_msystematic lupus erythematosus susceptibility 19 (mouse)Not determined3003248581135653Mouse
1357634Splq7_mspleen weight QTL 7 (mouse)Not determined73349772758148965Mouse
4141929Chlq18_mcirculating hormone level QTL 18 (mouse)Not determined74114882075148965Mouse
1300996Aorls2_maortic lesion size 2 (mouse)Not determined73239453266394681Mouse
10449158Eosn3_meosinophil differential 3 (mouse)71248087746480877Mouse
1301514Rigs1_mradiation induced gastroschisis 1 (mouse)Not determined73628001592394346Mouse
1300878Skts1_mskin tumor susceptibility 1 (mouse)Not determined73789138671891582Mouse
1301709Bdt4_mbone density traits 4 (mouse)Not determined72288857256888716Mouse
1300722Sle3_msystemic lupus erythmatosus susceptibility 3 (mouse)Not determined7351172887142720Mouse
12904742Litsq2_mlitter size QTL 2 (mouse)72267388756674033Mouse
1301175Ap7q_malcohol preference 7 QTL (mouse)Not determined73171484565715077Mouse
1300791Abbp3_mA/J and C57BL/6 blood pressure 3 (mouse)Not determined739673887103510010Mouse
1301622Eae12_msusceptibility to experimental allergic encephalomyelitis 12 (mouse)Not determined71928001553280104Mouse
11354952Pdcc1_mplasmacytoid dentritic cell compartment 1 (mouse)72306653157066531Mouse
12880417V125Dq5_mvitamin D active form serum level QTL 5 (mouse)74524974879249748Mouse
10402488Dipa2_mdrug induced psychomotor activation 2 (mouse)Not determined73842154872421684Mouse
4142102Tailq5_mtail length QTL 5 (mouse)Not determined3349772758148965Mouse
4141909W10q18_mweight 10 weeks QTL 18 (mouse)Not determined3349772758148965Mouse
10449139Eosn1_meosinophil differential 1 (mouse)71248087746480877Mouse
26884404Huml1_mhumerus length 1, 5 week (mouse)730199425108999207Mouse
1301052Bhr6_mbronchial hyperresponsiveness 6 (mouse)Not determined71984225053842367Mouse
1357883Epfq5_mepididymal fat pad weight QTL 5 (mouse)Not determined73349772758148965Mouse
10045622Heal20_mwound healing/regeneration 20 (mouse)Not determined73431688768317043Mouse
1301158Eae4_msusceptibility to experimental allergic encephalomyelitis 4 (mouse)Not determined719147398141919804Mouse
4142218W6q17_mweight 6 weeks QTL 17 (mouse)Not determined3349772758148965Mouse
10412199Sst2_msusceptibility to tuberculosis 2 (mouse)Not determined718728794119485380Mouse
25314303Vmm4_mvariable multisystem mineralization 4, kidney (mouse)73729942587049208Mouse
1559016Drsi_mDCC-related Spp1 induction (mouse)Not determined71663729349159331Mouse
25314301Vmm3_mvariable multisystem mineralization 3, lung (mouse)73729942572049748Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000038876   ⟹   ENSMUSP00000037289
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl745,567,447 - 45,570,828 (-)Ensembl
GRCm38.p6 Ensembl745,918,023 - 45,921,404 (-)Ensembl
Ensembl Acc Id: ENSMUST00000164119   ⟹   ENSMUSP00000132519
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl745,567,452 - 45,570,275 (-)Ensembl
GRCm38.p6 Ensembl745,918,028 - 45,920,851 (-)Ensembl
Ensembl Acc Id: ENSMUST00000210297   ⟹   ENSMUSP00000147800
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl745,567,455 - 45,570,586 (-)Ensembl
GRCm38.p6 Ensembl745,918,031 - 45,921,162 (-)Ensembl
Ensembl Acc Id: ENSMUST00000210937
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl745,567,607 - 45,569,544 (-)Ensembl
GRCm38.p6 Ensembl745,918,183 - 45,920,120 (-)Ensembl
Ensembl Acc Id: ENSMUST00000210939   ⟹   ENSMUSP00000148129
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl745,567,585 - 45,570,726 (-)Ensembl
GRCm38.p6 Ensembl745,918,161 - 45,921,302 (-)Ensembl
RefSeq Acc Id: NM_001146346   ⟹   NP_001139818
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39745,567,447 - 45,570,273 (-)NCBI
GRCm38745,918,023 - 45,920,849 (-)NCBI
MGSCv37753,173,393 - 53,176,796 (-)RGD
Celera741,383,035 - 41,386,440 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_010129   ⟹   NP_034259
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39745,567,447 - 45,570,850 (-)NCBI
GRCm38745,918,023 - 45,921,426 (-)ENTREZGENE
MGSCv37753,173,393 - 53,176,796 (-)RGD
Celera741,383,035 - 41,386,440 (-)RGD
cM Map7 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_034259   ⟸   NM_010129
- UniProtKB: O88333 (UniProtKB/Swiss-Prot),   Q3UIF8 (UniProtKB/Swiss-Prot),   O35912 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001139818   ⟸   NM_001146346
- UniProtKB: O88333 (UniProtKB/Swiss-Prot),   Q3UIF8 (UniProtKB/Swiss-Prot),   O35912 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSMUSP00000132519   ⟸   ENSMUST00000164119
Ensembl Acc Id: ENSMUSP00000148129   ⟸   ENSMUST00000210939
Ensembl Acc Id: ENSMUSP00000147800   ⟸   ENSMUST00000210297
Ensembl Acc Id: ENSMUSP00000037289   ⟸   ENSMUST00000038876

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O35912-F1-model_v2 AlphaFold O35912 1-163 view protein structure

Promoters
RGD ID:8664103
Promoter ID:EPDNEW_M10082
Type:initiation region
Name:Emp3_2
Description:Mus musculus epithelial membrane protein 3 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M10083  EPDNEW_M10084  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38745,920,851 - 45,920,911EPDNEW
RGD ID:8664105
Promoter ID:EPDNEW_M10083
Type:initiation region
Name:Emp3_1
Description:Mus musculus epithelial membrane protein 3 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M10082  EPDNEW_M10084  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38745,921,274 - 45,921,334EPDNEW
RGD ID:8664107
Promoter ID:EPDNEW_M10084
Type:multiple initiation site
Name:Emp3_3
Description:Mus musculus epithelial membrane protein 3 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M10082  EPDNEW_M10083  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38745,921,437 - 45,921,497EPDNEW
RGD ID:6848856
Promoter ID:MM_TRO:8859
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   BoneMarrow_0Hour,   Kidney,   MEF_B4
Transcripts:MTR006323.7.1563.3
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36753,175,311 - 53,175,811 (-)MPROMDB
RGD ID:6841003
Promoter ID:MM_KWN:50475
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_001146346,   NM_010129
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36753,176,011 - 53,177,672 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1098729 AgrOrtholog
Ensembl Genes ENSMUSG00000040212 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000038876 ENTREZGENE
  ENSMUST00000038876.13 UniProtKB/Swiss-Prot
  ENSMUST00000164119 ENTREZGENE
  ENSMUST00000164119.3 UniProtKB/Swiss-Prot
  ENSMUST00000210297.2 UniProtKB/Swiss-Prot
  ENSMUST00000210939.2 UniProtKB/TrEMBL
Gene3D-CATH 1.20.140.150 UniProtKB/Swiss-Prot
InterPro EMP_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PMP-22/EMP/MP20 UniProtKB/Swiss-Prot
  PMP22/EMP/MP20/Claudin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PMP22_EMP_MP20 UniProtKB/Swiss-Prot
KEGG Report mmu:13732 UniProtKB/Swiss-Prot
MGD MGI:1098729 ENTREZGENE
NCBI Gene 13732 ENTREZGENE
PANTHER EPITHELIAL MEMBRANE PROTEIN-RELATED UniProtKB/Swiss-Prot
  PTHR10671:SF8 UniProtKB/Swiss-Prot
Pfam PMP22_Claudin UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Emp3 PhenoGen
PRINTS EPMEMFAMILY UniProtKB/Swiss-Prot
  EPMEMPROT3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE PMP22_1 UniProtKB/Swiss-Prot
  PMP22_2 UniProtKB/Swiss-Prot
UniProt A0A1B0GSZ1_MOUSE UniProtKB/TrEMBL
  EMP3_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  O88333 ENTREZGENE
  Q3UIF8 ENTREZGENE
UniProt Secondary O88333 UniProtKB/Swiss-Prot
  Q3UIF8 UniProtKB/Swiss-Prot