Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:cardiac muscle contraction
go back to main search page
Accession:GO:0060048 term browser browse the term
Definition:Muscle contraction of cardiac muscle tissue.
Synonyms:exact_synonym: heart muscle contraction


show annotations for term's descendants           Sort by:
cardiac muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin, alpha, cardiac muscle 1 IDA RGD PMID:14551059 RGD:1600569 NCBI chr 3:100,811,987...100,817,523
Ensembl chr 3:100,811,987...100,817,523 		JBrowse link
G Ank2 ankyrin 2 acts_upstream_of_or_within ISO (MGI:3056879|PMID:15262991) RGD PMID:15262991 MGI:3056879 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923 		JBrowse link
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 involved_in TAS PMID:17442282 BHF-UCL PMID:17442282 RGD:6903343 NCBI chr 2:189,020,722...189,048,826
Ensembl chr 2:189,020,722...189,048,837 		JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 involved_in IC PMID:17442282 BHF-UCL PMID:17442282 RGD:6903343 NCBI chr13:84,729,597...84,754,544
Ensembl chr13:84,729,601...84,754,544 		JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 involved_in ISO (MGI:4352602|PMID:19376779) RGD PMID:19376779 MGI:4352602 NCBI chr 1:80,572,790...80,601,936
Ensembl chr 1:80,572,796...80,601,918 		JBrowse link
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 involved_in ISO
IEA		 (MGI:4359299|PMID:19683723)
GO_REF:0000107		 RGD
Ensembl		 PMID:19683723 GO_REF:0000107 MGI:4359299 NCBI chr13:76,786,580...76,807,096
Ensembl chr13:76,786,578...76,807,459 		JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta acts_upstream_of_or_within ISO (MGI:3528790|PMID:15652482) RGD PMID:15652482 MGI:3528790 NCBI chr 2:215,023,785...215,287,351
Ensembl chr 2:215,024,004...215,286,178 		JBrowse link
G Casq2 calsequestrin 2 involved_in ISO
IEA		 (PMID:16908766)
GO_REF:0000107		 RGD
Ensembl		 PMID:16908766 GO_REF:0000107 NCBI chr 2:189,526,003...189,582,276
Ensembl chr 2:189,525,960...189,582,267 		JBrowse link
G Csrp3 cysteine and glycine rich protein 3 involved_in IEA
ISO
IBA		 GO_REF:0000107
(MGI:2447926|PMID:12507422)
PMID:21873635
(PMID:12507422)		 Ensembl
RGD		 PMID:12507422 PMID:21873635 GO_REF:0000107 MGI:2447926, RGD:13792537 NCBI chr 1:98,528,067...98,546,647
Ensembl chr 1:98,528,068...98,546,653 		JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:17010372 RGD:1600772 NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883 		JBrowse link
G Dmd dystrophin involved_in ISO (PMID:19027585) RGD PMID:19027585 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207 		JBrowse link
G Gaa alpha glucosidase involved_in ISO
IEA		 (PMID:10931430)
GO_REF:0000107		 RGD
Ensembl		 PMID:10931430 GO_REF:0000107 NCBI chr10:104,529,673...104,546,836
Ensembl chr10:104,529,747...104,546,836 		JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in IEA
ISO		 GO_REF:0000107
(PMID:15051637)		 Ensembl
RGD		 PMID:15051637 GO_REF:0000107 NCBI chr 1:201,580,823...201,601,580
Ensembl chr 1:201,581,480...201,601,582 		JBrowse link
G Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in ISO (PMID:18313602) RGD PMID:18313602 NCBI chr  X:105,930,398...105,931,013
Ensembl chr  X:105,930,398...105,931,013 		JBrowse link
G Kcnh2 potassium voltage-gated channel subfamily H member 2 involved_in ISO (PMID:21536673) RGD PMID:21536673 NCBI chr 4:10,826,834...10,859,009
Ensembl chr 4:10,826,928...10,859,008 		JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:8528244)
MGI:2389447 (MGI:3721200|PMID:17660684)		 RGD PMID:8528244 PMID:17660684 MGI:3721200 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669 		JBrowse link
G Map2k3 mitogen activated protein kinase kinase 3 acts_upstream_of_or_within ISO MGI:2385922|MGI:3581033 (MGI:2152033|PMID:11593045) RGD PMID:11593045 MGI:2152033 NCBI chr10:45,608,145...45,629,492
Ensembl chr10:45,607,163...45,629,492 		JBrowse link
G Map2k6 mitogen-activated protein kinase kinase 6 acts_upstream_of_or_within ISO MGI:2385922|MGI:3581034 (MGI:2152033|PMID:11593045) RGD PMID:11593045 MGI:2152033 NCBI chr10:95,373,304...95,490,406
Ensembl chr10:95,373,204...95,488,293 		JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:3041135 (MGI:5529574|PMID:23994610) RGD PMID:23994610 MGI:5529574 NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876 		JBrowse link
G Mtor mechanistic target of rapamycin kinase acts_upstream_of_or_within
involved_in		 ISO
IEA		 MGI:3850506 (MGI:5632243|PMID:25139234)
GO_REF:0000107		 RGD
Ensembl		 PMID:25139234 GO_REF:0000107 MGI:5632243 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311 		JBrowse link
G Mybpc3 myosin binding protein C3 involved_in
acts_upstream_of_or_within		 IEP
ISO		 PMID:8799143
MGI:2654420|MGI:3606208 (MGI:3616388|PMID:16380103), (MGI:3696622|PMID:16224063)		 RGD PMID:16224063 PMID:16380103 PMID:8799143 MGI:3616388 MGI:3696622, RGD:8553425 NCBI chr 3:77,095,165...77,113,406
Ensembl chr 3:77,095,252...77,113,405 		JBrowse link
G Myh6 myosin heavy chain 6 involved_in IEA
IBA
ISO		 GO_REF:0000107
PMID:21873635
(MGI:1327483|PMID:9884344)		 Ensembl
RGD		 PMID:9884344 PMID:21873635 GO_REF:0000107 MGI:1327483, RGD:13792537 NCBI chr15:28,418,120...28,442,316
Ensembl chr15:28,417,616...28,441,720 		JBrowse link
G Myh7 myosin heavy chain 7 involved_in ISO
IBA
IEA		 (PMID:7883988)
PMID:21873635
GO_REF:0000107		 RGD
Ensembl		 PMID:7883988 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr15:28,446,550...28,469,888
Ensembl chr15:28,446,550...28,468,217 		JBrowse link
G Myl1 myosin, light chain 1 IMP RGD PMID:9409484 RGD:1600167 NCBI chr 9:68,437,514...68,458,256
Ensembl chr 9:68,437,517...68,458,261 		JBrowse link
G Myl2 myosin light chain 2 involved_in
acts_upstream_of_or_within		 IMP
IBA
ISO
IDA		 PMID:21873635
MGI:107956 (MGI:3604156|PMID:15308581)		 RGD PMID:15308581 PMID:9409484 PMID:21873635 PMID:11448842 PMID:12002261 MGI:3604156, RGD:1600167, RGD:13792537, RGD:1600178, RGD:1600170 NCBI chr12:34,454,223...34,468,554
Ensembl chr12:34,454,218...34,468,983 		JBrowse link
G Myl3 myosin light chain 3 involved_in IDA
IEA
ISO		 GO_REF:0000107
(PMID:16675844)		 Ensembl
RGD		 PMID:16675844 PMID:14659803 PMID:2044768 GO_REF:0000107, RGD:1598726, RGD:1600304 NCBI chr 8:110,738,669...110,744,814
Ensembl chr 8:110,738,661...110,744,816 		JBrowse link
G Myl4 myosin, light chain 4 involved_in ISO
IBA		 (PMID:14985854), (PMID:16675844)
PMID:21873635		 RGD PMID:14985854 PMID:16675844 PMID:21873635 RGD:13792537 NCBI chr10:89,449,456...89,485,365
Ensembl chr10:89,449,443...89,485,363 		JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:3042511 (MGI:4355491|PMID:19546853)		 Ensembl
RGD		 PMID:19546853 GO_REF:0000107 MGI:4355491 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G Ppp1r13l protein phosphatase 1, regulatory subunit 13 like acts_upstream_of_or_within ISO MGI:3575541 (MGI:3530389|PMID:15661756) RGD PMID:15661756 MGI:3530389 NCBI chr 1:79,010,997...79,030,714
Ensembl chr 1:79,011,745...79,030,712 		JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO MGI:1930939 (MGI:3612568|PMID:16204356) RGD PMID:16204356 MGI:3612568 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174 		JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:10830164) RGD PMID:10830164 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142 		JBrowse link
G Scn1b sodium voltage-gated channel beta subunit 1 involved_in ISO (PMID:19808477) RGD PMID:19808477 NCBI chr 1:86,353,917...86,363,820
Ensembl chr 1:86,353,917...86,363,739 		JBrowse link
G Scn2b sodium voltage-gated channel beta subunit 2 involved_in ISO (PMID:19808477) RGD PMID:19808477 NCBI chr 8:45,425,629...45,437,765
Ensembl chr 8:45,425,629...45,437,765 		JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in ISO (PMID:20042427), (PMID:21051419) RGD PMID:20042427 PMID:21051419 NCBI chr 8:40,630,372...40,652,869
Ensembl chr 8:40,630,455...40,652,868 		JBrowse link
G Scn4b sodium voltage-gated channel beta subunit 4 involved_in ISO (PMID:17592081) RGD PMID:17592081 NCBI chr 8:45,446,580...45,462,294
Ensembl chr 8:45,446,215...45,462,292 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO
ISS		 (PMID:18065446), (PMID:21895525), (PMID:22529811)
GO_REF:0000024		 RGD
BHF-UCL		 PMID:18065446 PMID:21895525 PMID:22529811 GO_REF:0000024 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769 		JBrowse link
G Sgcd sarcoglycan, delta acts_upstream_of_or_within ISO MGI:2180193 (MGI:5790783|PMID:23695275) RGD PMID:23695275 MGI:5790783 NCBI chr10:31,346,480...32,328,364
Ensembl chr10:31,280,511...31,724,840 		JBrowse link
G Slc8a1 solute carrier family 8 member A1 acts_upstream_of_or_within ISO MGI:97272 (MGI:3604156|PMID:15308581) RGD PMID:15308581 MGI:3604156 NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628 		JBrowse link
G Smad5 SMAD family member 5 acts_upstream_of_or_within ISO MGI:2679443 (MGI:3709210|PMID:17456754) RGD PMID:17456754 MGI:3709210 NCBI chr17:7,862,332...7,891,678
Ensembl chr17:7,864,720...7,891,634 		JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 acts_upstream_of_or_within ISO MGI:97272|MGI:98283 (MGI:3528790|PMID:15652482) RGD PMID:15652482 MGI:3528790 NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336 		JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:17043667) RGD PMID:17043667 NCBI chr  X:152,065,539...152,076,178
Ensembl chr  X:152,065,609...152,074,001 		JBrowse link
G Tcap titin-cap involved_in ISO (PMID:12507422), (PMID:15582318) RGD PMID:12507422 PMID:15582318 NCBI chr10:83,381,719...83,382,887
Ensembl chr10:83,381,719...83,382,887 		JBrowse link
G Tnnc1 troponin C1, slow skeletal and cardiac type involved_in IMP
IBA
ISO		 PMID:21873635
(PMID:15542288), (PMID:25771144)		 RGD PMID:15542288 PMID:25771144 PMID:9409484 PMID:21873635 RGD:1600167, RGD:13792537 NCBI chr16:6,400,801...6,405,634
Ensembl chr16:6,402,171...6,405,634 		JBrowse link
G Tnni1 troponin I1, slow skeletal type involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:47,229,217...47,241,640
Ensembl chr13:47,229,216...47,241,644 		JBrowse link
G Tnni2 troponin I2, fast skeletal type involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:197,595,012...197,597,554
Ensembl chr 1:197,594,813...197,597,560 		JBrowse link
G Tnni3 troponin I3, cardiac type involved_in IMP
IBA
ISO
IDA		 PMID:21873635
(PMID:11735257)		 RGD PMID:11735257 PMID:9409484 PMID:21873635 PMID:14551059 PMID:11448842 RGD:1600167, RGD:13792537, RGD:1600569, RGD:1600178 NCBI chr 1:69,299,900...69,303,582
Ensembl chr 1:69,299,900...69,303,580 		JBrowse link
G Tnnt2 troponin T2, cardiac type involved_in IDA
IEA
ISO
IBA		 GO_REF:0000107
(PMID:25771144)
PMID:21873635		 Ensembl
RGD		 PMID:25771144 PMID:11448842 PMID:21873635 GO_REF:0000107, RGD:1600178, RGD:13792537 NCBI chr13:47,267,325...47,285,390
Ensembl chr13:47,267,204...47,285,388 		JBrowse link
G Tpm1 tropomyosin 1 involved_in IDA
IEA
ISO
IBA		 GO_REF:0000107
(MGI:3802907|PMID:17556658)
(PMID:11136687)
PMID:21873635		 Ensembl
RGD		 PMID:11136687 PMID:17556658 PMID:14551059 PMID:21873635 GO_REF:0000107 MGI:3802907, RGD:1600569, RGD:13792537 NCBI chr 8:67,635,479...67,662,330
Ensembl chr 8:67,635,479...67,662,802 		JBrowse link
G Tpm1_v1 tropomyosin 1, variant 1 IDA RGD PMID:14551059 RGD:1600569
G Tpm1_v2 tropomyosin 1, variant 2 IDA RGD PMID:14551059 RGD:1600569
G Tpm1_v3 tropomyosin 1, variant 3 IDA RGD PMID:14551059 RGD:1600569
G Tpm1_v4 tropomyosin 1, variant 4 IDA RGD PMID:14551059 RGD:1600569
G Tpm1_v5 tropomyosin 1, variant 5 IDA RGD PMID:14551059 RGD:1600569
G Tpm1_v6 tropomyosin 1, variant 6 IDA RGD PMID:14551059 RGD:1600569
G Tpm1_v7 tropomyosin 1, variant 7 IDA RGD PMID:14551059 RGD:1600569
G Tpm1_v8 tropomyosin 1, variant 8 IDA RGD PMID:14551059 RGD:1600569
G Tpm1_v9 tropomyosin 1, variant 9 IDA RGD PMID:14551059 RGD:1600569
G Ttn titin involved_in ISO (PMID:11846417) RGD PMID:11846417 NCBI chr 3:61,652,432...61,924,912
Ensembl chr 3:61,652,439...61,924,741 		JBrowse link
G Vegfb vascular endothelial growth factor B acts_upstream_of_or_within ISO MGI:2178819 (MGI:1353384|PMID:10666423) RGD PMID:10666423 MGI:1353384 NCBI chr 1:204,172,297...204,178,046
Ensembl chr 1:204,172,225...204,177,944 		JBrowse link
atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:17242276), (PMID:18832177), (PMID:21859974)
(MGI:5427070|PMID:21859974)		 RGD PMID:17242276 PMID:18832177 PMID:21859974 MGI:5427070 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923 		JBrowse link
G Kcna5 potassium voltage-gated channel subfamily A member 5 involved_in ISO (PMID:19343045), (PMID:23264583) RGD PMID:19343045 PMID:23264583 NCBI chr 4:159,354,689...159,358,173
Ensembl chr 4:159,350,097...159,357,697 		JBrowse link
G Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in ISO (PMID:18313602) RGD PMID:18313602 NCBI chr  X:105,930,398...105,931,013
Ensembl chr  X:105,930,398...105,931,013 		JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:12522251) RGD PMID:12522251 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669 		JBrowse link
G Nup155 nucleoporin 155 acts_upstream_of_or_within ISO MGI:3840086 (MGI:3839697|PMID:19070573) RGD PMID:19070573 MGI:3839697 NCBI chr 2:57,201,310...57,252,918
Ensembl chr 2:57,201,272...57,254,148 		JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in ISO (PMID:21051419) RGD PMID:21051419 NCBI chr 8:40,630,372...40,652,869
Ensembl chr 8:40,630,455...40,652,868 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISS
ISO		 GO_REF:0000024
(PMID:18065446)		 BHF-UCL
RGD		 PMID:18065446 GO_REF:0000024 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769 		JBrowse link
cardiac muscle cell action potential involved in contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISO
ISS		 (PMID:15454078)
GO_REF:0000024		 RGD
BHF-UCL		 PMID:15454078 GO_REF:0000024 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648 		JBrowse link
G Cacna1d calcium voltage-gated channel subunit alpha1 D involved_in ISO
IEA		 (PMID:21131953)
GO_REF:0000107		 RGD
Ensembl		 PMID:21131953 GO_REF:0000107 NCBI chr16:5,227,157...5,521,163
Ensembl chr16:5,228,306...5,668,215 		JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISS
ISO		 GO_REF:0000024
(MGI:3714901|PMID:16690884)		 BHF-UCL
RGD		 PMID:16690884 GO_REF:0000024 MGI:3714901 NCBI chr10:79,354,998...79,422,960
Ensembl chr10:79,355,008...79,422,752 		JBrowse link
G Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 involved_in ISO
IEA		 (PMID:25527503)
GO_REF:0000107		 RGD
Ensembl		 PMID:25527503 GO_REF:0000107 NCBI chr 4:18,950,611...19,374,969
Ensembl chr 4:18,951,002...19,374,969 		JBrowse link
G Kcnd3 potassium voltage-gated channel subfamily D member 3 acts_upstream_of_or_within ISO (MGI:6402838|PMID:32109384) RGD PMID:32109384 MGI:6402838 NCBI chr 2:192,937,950...193,155,345
Ensembl chr 2:192,937,950...193,155,345 		JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO (PMID:10400998) RGD PMID:10400998 NCBI chr11:31,580,951...31,594,116
Ensembl chr11:31,580,742...31,593,901 		JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in ISO (PMID:10219239) RGD PMID:10219239 NCBI chr11:31,517,176...31,530,026
Ensembl chr11:31,295,614...31,530,043 		JBrowse link
G Kcnj2 potassium inwardly-rectifying channel, subfamily J, member 2 involved_in ISO (PMID:11371347) RGD PMID:11371347 NCBI chr10:96,060,834...96,071,397
Ensembl chr10:96,060,821...96,071,445 		JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:22889254) RGD PMID:22889254 NCBI chr11:84,661,783...84,727,730
Ensembl chr11:84,661,783...84,727,730 		JBrowse link
G Scn1a sodium voltage-gated channel alpha subunit 1 involved_in ISO
IEA		 (PMID:27207958)
GO_REF:0000107		 RGD
Ensembl		 PMID:27207958 GO_REF:0000107 NCBI chr 3:50,952,790...51,071,804
Ensembl chr 3:50,952,791...51,071,699 		JBrowse link
G Scn1b sodium voltage-gated channel beta subunit 1 involved_in ISO
IEA
IBA		 (PMID:19808477)
GO_REF:0000107
PMID:21873635		 RGD
Ensembl		 PMID:19808477 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 1:86,353,917...86,363,820
Ensembl chr 1:86,353,917...86,363,739 		JBrowse link
G Scn2b sodium voltage-gated channel beta subunit 2 involved_in ISO
IBA		 (PMID:19808477)
PMID:21873635		 RGD PMID:19808477 PMID:21873635 RGD:13792537 NCBI chr 8:45,425,629...45,437,765
Ensembl chr 8:45,425,629...45,437,765 		JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in ISO (PMID:21051419) RGD PMID:21051419 NCBI chr 8:40,630,372...40,652,869
Ensembl chr 8:40,630,455...40,652,868 		JBrowse link
G Scn4b sodium voltage-gated channel beta subunit 4 involved_in ISO
IBA		 (PMID:17592081)
PMID:21873635		 RGD PMID:17592081 PMID:21873635 RGD:13792537 NCBI chr 8:45,446,580...45,462,294
Ensembl chr 8:45,446,215...45,462,292 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in
acts_upstream_of_or_within		 ISO
ISS		 (PMID:21895525)
(MGI:6402838|PMID:32109384)
GO_REF:0000024		 RGD
BHF-UCL		 PMID:21895525 PMID:32109384 GO_REF:0000024 MGI:6402838 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769 		JBrowse link
cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcc9 ATP binding cassette subfamily C member 9 acts_upstream_of_or_within_positive_effect
involved_in		 ISO
IEA		 MGI:6389242 (MGI:6377987|PMID:31575858)
GO_REF:0000107		 RGD
Ensembl		 PMID:31575858 GO_REF:0000107 MGI:6377987 NCBI chr 4:175,531,854...175,655,849
Ensembl chr 4:175,532,547...175,655,356 		JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta involved_in IDA PMID:12676814 BHF-UCL PMID:12676814 RGD:8656014 NCBI chr 2:215,023,785...215,287,351
Ensembl chr 2:215,024,004...215,286,178 		JBrowse link
G Gsn gelsolin involved_in ISO
IEA		 (MGI:6450443|PMID:30568254)
GO_REF:0000107		 RGD
Ensembl		 PMID:30568254 GO_REF:0000107 MGI:6450443 NCBI chr 3:18,585,166...18,638,404
Ensembl chr 3:18,585,172...18,638,402 		JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha involved_in ISO (MGI:6450443|PMID:30568254) RGD PMID:30568254 MGI:6450443 NCBI chr 2:115,175,275...115,249,034
Ensembl chr 2:115,174,984...115,249,032 		JBrowse link
G Sgcd sarcoglycan, delta acts_upstream_of_or_within ISO MGI:2154694 (MGI:1343715|PMID:10481911) RGD PMID:10481911 MGI:1343715 NCBI chr10:31,346,480...32,328,364
Ensembl chr10:31,280,511...31,724,840 		JBrowse link
G Slc9a1 solute carrier family 9 member A1 IEP RGD PMID:20868366 RGD:7349316 NCBI chr 5:145,576,341...145,629,630
Ensembl chr 5:145,576,334...145,629,624 		JBrowse link
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked acts_upstream_of_or_within ISO (MGI:5305502|PMID:22192413) RGD PMID:22192413 MGI:5305502 NCBI chr  Y:942,838...1,105,313
Ensembl chr  Y:924,168...1,103,422 		JBrowse link
membrane depolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISO
ISS
IEA		 (PMID:17224476)
GO_REF:0000024
GO_REF:0000107		 RGD
BHF-UCL
Ensembl		 PMID:17224476 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648 		JBrowse link
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:17224476)		 BHF-UCL
Ensembl
RGD		 PMID:17224476 GO_REF:0000024 GO_REF:0000107 NCBI chr17:77,564,630...77,910,000
Ensembl chr17:77,564,460...77,909,106 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO
IEA		 (PMID:18065446)
GO_REF:0000107		 RGD
Ensembl		 PMID:18065446 GO_REF:0000107 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769 		JBrowse link
membrane repolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna5 potassium voltage-gated channel subfamily A member 5 involved_in ISO (PMID:19343045), (PMID:23264583) RGD PMID:19343045 PMID:23264583 NCBI chr 4:159,354,689...159,358,173
Ensembl chr 4:159,350,097...159,357,697 		JBrowse link
G Kcnj5 potassium inwardly-rectifying channel, subfamily J, member 5 involved_in ISO
IEA		 (PMID:20560207)
GO_REF:0000107		 RGD
Ensembl		 PMID:20560207 GO_REF:0000107 NCBI chr 8:30,724,923...30,753,083
Ensembl chr 8:30,724,925...30,753,518 		JBrowse link
G Kcnn2 potassium calcium-activated channel subfamily N member 2 involved_in ISO
IEA		 (MGI:5292192|PMID:19139040)
GO_REF:0000107		 RGD
Ensembl		 PMID:19139040 GO_REF:0000107 MGI:5292192 NCBI chr18:37,817,966...38,258,347
Ensembl chr18:37,817,957...38,258,347 		JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO
IEA		 (PMID:12522251), (PMID:25786344)
GO_REF:0000107		 RGD
Ensembl		 PMID:12522251 PMID:25786344 GO_REF:0000107 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669 		JBrowse link
membrane repolarization during ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnd3 potassium voltage-gated channel subfamily D member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:192,937,950...193,155,345
Ensembl chr 2:192,937,950...193,155,345 		JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO (PMID:9354802) RGD PMID:9354802 NCBI chr11:31,580,951...31,594,116
Ensembl chr11:31,580,742...31,593,901 		JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in ISO (PMID:10219239) RGD PMID:10219239 NCBI chr11:31,517,176...31,530,026
Ensembl chr11:31,295,614...31,530,043 		JBrowse link
G Kcne3 potassium voltage-gated channel subfamily E regulatory subunit 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:154,523,903...154,530,865
Ensembl chr 1:154,523,830...154,532,020 		JBrowse link
G Kcne4 potassium voltage-gated channel subfamily E regulatory subunit 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:80,243,429...80,251,533
Ensembl chr 9:80,247,379...80,250,979 		JBrowse link
G Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:105,930,398...105,931,013
Ensembl chr  X:105,930,398...105,931,013 		JBrowse link
G Kcnh2 potassium voltage-gated channel subfamily H member 2 involved_in ISO (PMID:21536673) RGD PMID:21536673 NCBI chr 4:10,826,834...10,859,009
Ensembl chr 4:10,826,928...10,859,008 		JBrowse link
G Kcnj8 potassium inwardly-rectifying channel, subfamily J, member 8 involved_in ISO (PMID:20558321) RGD PMID:20558321 NCBI chr 4:175,508,908...175,515,829
Ensembl chr 4:175,508,912...175,515,603 		JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in
acts_upstream_of_or_within		 ISO
IBA
IEA		 (PMID:8528244)
MGI:2680653 (MGI:3587563|PMID:15004216), (MGI:3719729|PMID:12766260)
PMID:21873635
GO_REF:0000107		 RGD
Ensembl		 PMID:8528244 PMID:12766260 PMID:15004216 PMID:21873635 GO_REF:0000107 MGI:3587563 MGI:3719729, RGD:13792537 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669 		JBrowse link
G Scn2b sodium voltage-gated channel beta subunit 2 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 8:45,425,629...45,437,765
Ensembl chr 8:45,425,629...45,437,765 		JBrowse link
negative regulation of cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy10 adenylate cyclase 10 IMP RGD PMID:31754830 RGD:329403060 NCBI chr13:77,747,752...77,833,952
Ensembl chr13:77,768,468...77,833,951 		JBrowse link
negative regulation of cardiac muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde5a phosphodiesterase 5A involved_in ISO
IEA		 (MGI:3836877|PMID:19127022)
GO_REF:0000107		 RGD
Ensembl		 PMID:19127022 GO_REF:0000107 MGI:3836877 NCBI chr 2:210,858,515...211,003,480
Ensembl chr 2:210,858,063...210,999,701 		JBrowse link
G Sri sorcin involved_in ISO (MGI:5319286|PMID:22326846) RGD PMID:22326846 MGI:5319286 NCBI chr 4:25,973,493...25,997,879
Ensembl chr 4:25,966,750...25,998,077 		JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
ISO		 GO_REF:0000024
(MGI:5142149|PMID:21616078)		 UniProt
RGD		 PMID:21616078 GO_REF:0000024 MGI:5142149 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351 		JBrowse link
negative regulation of membrane repolarization during ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcne3 potassium voltage-gated channel subfamily E regulatory subunit 3 involved_in ISO (PMID:22987075) RGD PMID:22987075 NCBI chr 1:154,523,903...154,530,865
Ensembl chr 1:154,523,830...154,532,020 		JBrowse link
negative regulation of ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bin1 bridging integrator 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:5583915|PMID:24836577)		 Ensembl
RGD		 PMID:24836577 GO_REF:0000107 MGI:5583915 NCBI chr18:24,009,731...24,067,267
Ensembl chr18:24,009,653...24,067,263 		JBrowse link
positive regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 IMP RGD PMID:23954346 RGD:10003031 NCBI chr 1:95,781,805...95,812,095
Ensembl chr 1:95,782,000...95,812,532 		JBrowse link
positive regulation of cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:181,026,606...181,044,859
Ensembl chr 1:181,026,608...181,044,838 		JBrowse link
G Cacna1h calcium voltage-gated channel subunit alpha1 H IMP RGD PMID:19443576 RGD:7205486 NCBI chr10:14,390,104...14,448,204
Ensembl chr10:14,390,113...14,448,376 		JBrowse link
G Strit1 small transmembrane regulator of ion transport 1 involved_in ISO (MGI:6304509|PMID:30299255) RGD PMID:30299255 MGI:6304509 NCBI chr 2:147,935,219...147,938,083
Ensembl chr 2:147,935,222...147,938,083 		JBrowse link
positive regulation of cardiac muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin I converting enzyme 2 involved_in IEA
ISO		 GO_REF:0000107
(MGI:2181229|PMID:12075344)		 Ensembl
RGD		 PMID:12075344 GO_REF:0000107 MGI:2181229 NCBI chr  X:30,293,597...30,340,961
Ensembl chr  X:30,293,589...30,340,977 		JBrowse link
G Adra1a adrenoceptor alpha 1A involved_in IMP PMID:19011682 BHF-UCL PMID:19011682 RGD:5688340 NCBI chr15:40,830,125...40,935,902
Ensembl chr15:40,832,534...40,927,500 		JBrowse link
G Ccn2 cellular communication network factor 2 IMP RGD PMID:19707545 RGD:2314476 NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734 		JBrowse link
G Chga chromogranin A involved_in IDA PMID:22459152 UniProt PMID:22459152 RGD:6906968 NCBI chr 6:121,696,051...121,707,399
Ensembl chr 6:121,696,051...121,707,398 		JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 IEP RGD PMID:21620734 RGD:5686387 NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268 		JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA
ISO		 GO_REF:0000107
(PMID:19646991)		 Ensembl
RGD		 PMID:19646991 GO_REF:0000107 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669 		JBrowse link
G Nppa natriuretic peptide A involved_in ISO
IEA		 (PMID:19646991)
GO_REF:0000107		 RGD
Ensembl		 PMID:19646991 GO_REF:0000107 NCBI chr 5:158,429,042...158,430,351
Ensembl chr 5:158,429,042...158,430,351 		JBrowse link
G Rgs2 regulator of G-protein signaling 2 involved_in ISO (MGI:3836877|PMID:19127022), (MGI:5009116|PMID:21291891) RGD PMID:19127022 PMID:21291891 MGI:3836877 MGI:5009116 NCBI chr13:55,799,749...55,802,354
Ensembl chr13:55,798,829...55,802,385 		JBrowse link
G Smtn smoothelin acts_upstream_of_or_within ISO MGI:3613292|MGI:3613293 (MGI:4437553|PMID:18678771) RGD PMID:18678771 MGI:4437553 NCBI chr14:78,398,595...78,420,908
Ensembl chr14:78,397,778...78,420,886 		JBrowse link
G Ucn urocortin IDA RGD PMID:19460778 RGD:5508168 NCBI chr 6:25,238,120...25,238,950
Ensembl chr 6:25,238,120...25,238,950 		JBrowse link
positive regulation of ryanodine-sensitive calcium-release channel activity by adrenergic receptor signaling pathway involved in positive regulation of cardiac muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mir1 microRNA 1 involved_in ISO (PMID:19131648) RGD PMID:19131648 NCBI chr18:1,887,537...1,887,623 JBrowse link
G Mir1b microRNA 1b involved_in ISO (PMID:19131648) RGD PMID:19131648 NCBI chr 3:167,487,117...167,487,201
Ensembl chr 3:167,487,117...167,487,201 		JBrowse link
regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:12571597)
(MGI:2449848|PMID:12571597)		 RGD PMID:12571597 MGI:2449848 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923 		JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO (PMID:23348765) RGD PMID:23348765 NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952 		JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO
IEA		 (PMID:17875969)
GO_REF:0000107		 RGD
Ensembl		 PMID:17875969 GO_REF:0000107 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142 		JBrowse link
regulation of cardiac muscle cell action potential involved in regulation of contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap9 A-kinase anchoring protein 9 involved_in ISO (PMID:18093912) RGD PMID:18093912 NCBI chr 4:30,056,738...30,192,716
Ensembl chr 4:30,056,738...30,192,606 		JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in IDA PMID:9851937 BHF-UCL PMID:9851937 RGD:10047146 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101 		JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta involved_in IC PMID:12676813 BHF-UCL PMID:12676813 RGD:10047271 NCBI chr 2:215,023,785...215,287,351
Ensembl chr 2:215,024,004...215,286,178 		JBrowse link
G Cav3 caveolin 3 involved_in ISO (PMID:17060380) RGD PMID:17060380 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137 		JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISO (MGI:5437408|PMID:21817159) RGD PMID:21817159 MGI:5437408 NCBI chr  X:137,276,498...137,800,056
Ensembl chr  X:137,276,511...137,800,391 		JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 involved_in ISO
IEA		 (PMID:16407510)
GO_REF:0000107		 RGD
Ensembl		 PMID:16407510 GO_REF:0000107 NCBI chr 8:59,222,206...59,259,626
Ensembl chr 8:59,221,653...59,259,639 		JBrowse link
G Rangrf RAN guanine nucleotide release factor involved_in ISO (PMID:21621375) RGD PMID:21621375 NCBI chr10:53,677,467...53,678,880
Ensembl chr10:53,677,467...53,678,840 		JBrowse link
regulation of cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IDA RGD PMID:19525381 RGD:2317914 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801 		JBrowse link
G Adrb1 adrenoceptor beta 1 IMP
IDA		 RGD PMID:22216755 PMID:19525381 RGD:6893639, RGD:2317914 NCBI chr 1:255,771,962...255,774,973
Ensembl chr 1:255,771,597...255,807,259 		JBrowse link
G Akap6 A-kinase anchoring protein 6 involved_in IMP PMID:11179196 BHF-UCL PMID:11179196 RGD:8553373 NCBI chr 6:70,184,101...70,624,369
Ensembl chr 6:70,184,175...70,619,738 		JBrowse link
G Ank2 ankyrin 2 involved_in ISO UniProtKB:Q8C8R3 (PMID:17242276)
(MGI:3771114|PMID:17242276)		 RGD PMID:17242276 MGI:3771114 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923 		JBrowse link
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 IMP RGD PMID:15629895 RGD:6903236 NCBI chr 2:189,020,722...189,048,826
Ensembl chr 2:189,020,722...189,048,837 		JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 IMP RGD PMID:17442282 RGD:6903343 NCBI chr13:84,729,597...84,754,544
Ensembl chr13:84,729,601...84,754,544 		JBrowse link
G Casq2 calsequestrin 2 involved_in IMP PMID:17569730 BHF-UCL PMID:17569730 RGD:2314601 NCBI chr 2:189,526,003...189,582,276
Ensembl chr 2:189,525,960...189,582,267 		JBrowse link
G Fxyd1 FXYD domain-containing ion transport regulator 1 IMP RGD PMID:14684371 RGD:9685468 NCBI chr 1:86,287,163...86,291,478
Ensembl chr 1:86,287,165...86,291,278 		JBrowse link
G Gata4 GATA binding protein 4 IMP RGD PMID:21702924 RGD:7207043 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636 		JBrowse link
G Kcnj2 potassium inwardly-rectifying channel, subfamily J, member 2 IMP RGD PMID:22426100 RGD:7247430 NCBI chr10:96,060,834...96,071,397
Ensembl chr10:96,060,821...96,071,445 		JBrowse link
G Myh7b myosin heavy chain 7B IMP RGD PMID:32207065 RGD:126925946 NCBI chr 3:144,076,911...144,122,714
Ensembl chr 3:144,098,190...144,122,084 		JBrowse link
G Pde4b phosphodiesterase 4B involved_in ISO
IEA		 (MGI:5286798|PMID:21670503)
GO_REF:0000107		 RGD
Ensembl		 PMID:21670503 GO_REF:0000107 MGI:5286798 NCBI chr 5:116,799,819...117,369,155
Ensembl chr 5:116,799,971...117,367,696 		JBrowse link
G Pde4d phosphodiesterase 4D involved_in IMP
ISO
IBA		 (MGI:5286798|PMID:21670503), (MGI:5442270|PMID:21903937)
PMID:21873635
PMID:19801680		 RGD PMID:21670503 PMID:21903937 PMID:19801680 PMID:21873635 PMID:19801680 MGI:5286798 MGI:5442270, RGD:7327160, RGD:13792537, RGD:7327160 NCBI chr 2:40,014,933...41,529,190
Ensembl chr 2:40,019,933...41,525,884 		JBrowse link
G Pln phospholamban acts_upstream_of_or_within ISO MGI:2158357 (MGI:3655311|PMID:8620604) RGD PMID:8620604 MGI:3655311 NCBI chr20:32,629,537...32,639,559 JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in
acts_upstream_of_or_within		 ISO
ISS
IEA		 (PMID:22529811)
GO_REF:0000024
GO_REF:0000107
MGI:2179753 (MGI:3695100|PMID:16172272)		 RGD
BHF-UCL
Ensembl		 PMID:16172272 PMID:22529811 GO_REF:0000024 GO_REF:0000107 MGI:3695100 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769 		JBrowse link
G Sri sorcin involved_in ISO (PMID:12754254), (PMID:17130302) RGD PMID:12754254 PMID:17130302 NCBI chr 4:25,973,493...25,997,879
Ensembl chr 4:25,966,750...25,998,077 		JBrowse link
G Stc1 stanniocalcin 1 involved_in ISO (PMID:12663264) RGD PMID:12663264 NCBI chr15:44,299,591...44,311,695
Ensembl chr15:44,299,621...44,310,264 		JBrowse link
G Sumo1 small ubiquitin-like modifier 1 involved_in ISO (MGI:5292424|PMID:21900893) RGD PMID:21900893 MGI:5292424 NCBI chr 9:61,078,790...61,108,697
Ensembl chr 9:61,077,435...61,108,761 		JBrowse link
regulation of cardiac muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IMP RGD PMID:20334814 RGD:2317910 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801 		JBrowse link
G Adra1a adrenoceptor alpha 1A involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr15:40,830,125...40,935,902
Ensembl chr15:40,832,534...40,927,500 		JBrowse link
G Adra1b adrenoceptor alpha 1B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:28,255,025...28,373,418
Ensembl chr10:28,255,025...28,312,919 		JBrowse link
G Agrn agrin involved_in ISO (MGI:4352602|PMID:19376779) RGD PMID:19376779 MGI:4352602 NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003 		JBrowse link
G Ank2 ankyrin 2 involved_in ISO (PMID:15178757)
(MGI:3044878|PMID:15178757)		 RGD PMID:15178757 MGI:3044878 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923 		JBrowse link
G Asb15 ankyrin repeat and SOCS box containing 15 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:53,021,553...53,050,846
Ensembl chr 4:53,031,692...53,049,928 		JBrowse link
G Bmp10 bone morphogenetic protein 10 involved_in ISO
IEA		 (PMID:17921333)
GO_REF:0000107		 RGD
Ensembl		 PMID:17921333 GO_REF:0000107 NCBI chr 4:119,872,066...119,877,694
Ensembl chr 4:119,872,045...119,878,627 		JBrowse link
G Calm1 calmodulin 1 involved_in ISO
IEA		 (PMID:23040497)
GO_REF:0000107		 RGD
Ensembl		 PMID:23040497 GO_REF:0000107 NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227 		JBrowse link
G Calm2 calmodulin 2 involved_in ISO (PMID:23040497) RGD PMID:23040497 NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287
Ensembl chr15:7,091,567...7,104,287 		JBrowse link
G Calm3 calmodulin 3 involved_in ISO (PMID:23040497) RGD PMID:23040497 NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207 		JBrowse link
G Cav3 caveolin 3 involved_in ISO (PMID:17275750) RGD PMID:17275750 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137 		JBrowse link
G Ehd3 EH-domain containing 3 involved_in IEA
ISO		 GO_REF:0000107
(MGI:5770033|PMID:25825486)		 Ensembl
RGD		 PMID:25825486 GO_REF:0000107 MGI:5770033 NCBI chr 6:21,640,861...21,665,601
Ensembl chr 6:21,639,290...21,665,236 		JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO (PMID:16790700), (PMID:22247482), (PMID:23348765) RGD PMID:16790700 PMID:22247482 PMID:23348765 NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952 		JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 involved_in ISO (PMID:12750403) RGD PMID:12750403 NCBI chr 8:59,222,206...59,259,626
Ensembl chr 8:59,221,653...59,259,639 		JBrowse link
G Mir200c microRNA 200c acts_upstream_of ISO (PMID:29373717) RGD PMID:29373717 NCBI chr 4:157,523,679...157,523,747 JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3829107|PMID:18689573)		 Ensembl
RGD		 PMID:18689573 GO_REF:0000107 MGI:3829107 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934 		JBrowse link
G P2rx4 purinergic receptor P2X 4 involved_in ISO (PMID:11606481), (PMID:15130891) RGD PMID:11606481 PMID:15130891 NCBI chr12:33,844,609...33,862,265
Ensembl chr12:33,844,396...33,862,253 		JBrowse link
G Rnf207 ring finger protein 207 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:162,815,351...162,828,325
Ensembl chr 5:162,815,357...162,828,375 		JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:11159936) RGD PMID:11159936 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142 		JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 involved_in ISO (PMID:20062061) RGD PMID:20062061 NCBI chr 8:119,350,723...119,462,882
Ensembl chr 8:119,350,724...119,462,614 		JBrowse link
G Smad7 SMAD family member 7 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3836072|PMID:18952608)		 Ensembl
RGD		 PMID:18952608 GO_REF:0000107 MGI:3836072 NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765 		JBrowse link
G Tnni3k TNNI3 interacting kinase involved_in ISO
IEA
ISS		 (PMID:24925317)
GO_REF:0000107
GO_REF:0000024		 RGD
Ensembl
BHF-UCL		 PMID:24925317 GO_REF:0000024 GO_REF:0000107 NCBI chr 2:243,737,346...244,005,319
Ensembl chr 2:243,710,950...244,005,268 		JBrowse link
regulation of cardiac muscle contraction by calcium ion signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:12571597)
(MGI:2449848|PMID:12571597)		 RGD PMID:12571597 MGI:2449848 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923 		JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 involved_in IC PMID:17442282 BHF-UCL PMID:17442282 RGD:6903343 NCBI chr13:84,729,597...84,754,544
Ensembl chr13:84,729,601...84,754,544 		JBrowse link
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 involved_in ISO
IEA		 (MGI:4359299|PMID:19683723)
GO_REF:0000107		 RGD
Ensembl		 PMID:19683723 GO_REF:0000107 MGI:4359299 NCBI chr13:76,786,580...76,807,096
Ensembl chr13:76,786,578...76,807,459 		JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in ISO
IBA
IDA		 (PMID:10587333)
PMID:21873635
PMID:9851937		 RGD PMID:10587333 PMID:21873635 PMID:9851937 RGD:13792537, RGD:10047146 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101 		JBrowse link
G Hdac4 histone deacetylase 4 acts_upstream_of_or_within
involved_in		 ISO
IEA		 (MGI:3793386|PMID:18250163)
GO_REF:0000107		 RGD
Ensembl		 PMID:18250163 GO_REF:0000107 MGI:3793386 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164 		JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17875969) RGD PMID:17875969 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142 		JBrowse link
G Slc9a1 solute carrier family 9 member A1 involved_in ISO (PMID:15105296) RGD PMID:15105296 NCBI chr 5:145,576,341...145,629,630
Ensembl chr 5:145,576,334...145,629,624 		JBrowse link
G Tnni3 troponin I3, cardiac type involved_in ISO (PMID:25771144) RGD PMID:25771144 NCBI chr 1:69,299,900...69,303,582
Ensembl chr 1:69,299,900...69,303,580 		JBrowse link
regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO UniProtKB:Q8C8R3 (PMID:17178715)
(MGI:5427070|PMID:21859974), (MGI:5430893|PMID:17178715)		 RGD PMID:17178715 PMID:21859974 MGI:5427070 MGI:5430893 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923 		JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648 		JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta involved_in IC PMID:12676813 BHF-UCL PMID:12676813 RGD:10047271 NCBI chr 2:215,023,785...215,287,351
Ensembl chr 2:215,024,004...215,286,178 		JBrowse link
G Casq2 calsequestrin 2 involved_in
acts_upstream_of_or_within		 IBA
IEA
ISO
IMP		 PMID:21873635
GO_REF:0000107
(MGI:1202079|PMID:9525981)
(MGI:3689635|PMID:16932808)
PMID:17569730
(PMID:16601229), (PMID:16908766)		 Ensembl
RGD		 PMID:9525981 PMID:16601229 PMID:16908766 PMID:16932808 PMID:21873635 More... GO_REF:0000107 MGI:1202079 MGI:3689635, RGD:13792537, RGD:2314601 NCBI chr 2:189,526,003...189,582,276
Ensembl chr 2:189,525,960...189,582,267 		JBrowse link
G Dmd dystrophin involved_in ISO (MGI:4420848|PMID:20080623) RGD PMID:20080623 MGI:4420848 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207 		JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B involved_in IBA
ISO		 PMID:21873635
(MGI:3621834|PMID:12837242)		 RGD PMID:12837242 PMID:21873635 MGI:3621834, RGD:13792537 NCBI chr 6:27,832,128...27,850,600
Ensembl chr 6:27,838,802...27,848,653 		JBrowse link
G Pln phospholamban acts_upstream_of_or_within ISO MGI:2158357 (MGI:82999|PMID:8831698) RGD PMID:8831698 MGI:82999 NCBI chr20:32,629,537...32,639,559 JBrowse link
G Ryr2 ryanodine receptor 2 involved_in IEA
ISO		 GO_REF:0000107
UniProtKB:Q9Z2I2 (MGI:3621834|PMID:12837242)		 Ensembl
RGD		 PMID:12837242 GO_REF:0000107 MGI:3621834 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142 		JBrowse link
G Slc8a1 solute carrier family 8 member A1 involved_in IDA PMID:21779914 BHF-UCL PMID:21779914 RGD:8554732 NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628 		JBrowse link
G Tmem38a transmembrane protein 38a involved_in
acts_upstream_of_or_within		 IEA
ISO		 GO_REF:0000107
MGI:1098718 (MGI:3715564|PMID:17611541)		 Ensembl
RGD		 PMID:17611541 GO_REF:0000107 MGI:3715564 NCBI chr16:17,258,160...17,274,204
Ensembl chr16:17,258,164...17,273,415 		JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO MGI:1921416 (MGI:3715564|PMID:17611541) RGD PMID:17611541 MGI:3715564 NCBI chr 5:68,460,304...68,496,026
Ensembl chr 5:68,460,304...68,496,025 		JBrowse link
regulation of ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISS
IEA
ISO		 GO_REF:0000024
GO_REF:0000107
(PMID:15454078), (PMID:26253506)		 BHF-UCL
Ensembl
RGD		 PMID:15454078 PMID:26253506 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648 		JBrowse link
G Cav1 caveolin 1 involved_in ISO
IEA		 (MGI:5607357|PMID:25017399)
GO_REF:0000107		 RGD
Ensembl		 PMID:25017399 GO_REF:0000107 MGI:5607357 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705 		JBrowse link
G Ctnna3 catenin alpha 3 involved_in ISO (PMID:23136403) RGD PMID:23136403 NCBI chr20:23,614,469...25,200,026
Ensembl chr20:23,623,560...25,199,978 		JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in IEA
ISO		 GO_REF:0000107
(MGI:5816439|PMID:25447080)		 Ensembl
RGD		 PMID:25447080 GO_REF:0000107 MGI:5816439 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689 		JBrowse link
G Dsc2 desmocollin 2 involved_in ISO (PMID:23863954) RGD PMID:23863954 NCBI chr18:11,450,392...11,482,476
Ensembl chr18:11,450,390...11,482,392 		JBrowse link
G Dsg2 desmoglein 2 involved_in ISO (PMID:16505173), (PMID:23381804) RGD PMID:16505173 PMID:23381804 NCBI chr18:11,846,207...11,904,630
Ensembl chr18:11,846,183...11,904,156 		JBrowse link
G Dsp desmoplakin involved_in ISO (PMID:12373648) RGD PMID:12373648 NCBI chr17:26,623,602...26,671,692
Ensembl chr17:26,623,588...26,671,800 		JBrowse link
G Jup junction plakoglobin involved_in ISO
IEA		 (PMID:17924338)
GO_REF:0000107		 RGD
Ensembl		 PMID:17924338 GO_REF:0000107 NCBI chr10:85,300,438...85,327,378
Ensembl chr10:85,300,440...85,327,057 		JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:22889254) RGD PMID:22889254 NCBI chr11:84,661,783...84,727,730
Ensembl chr11:84,661,783...84,727,730 		JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO
IEA		 (PMID:17875969)
GO_REF:0000107		 RGD
Ensembl		 PMID:17875969 GO_REF:0000107 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142 		JBrowse link
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 involved_in ISO
IEA		 (PMID:27207958)
GO_REF:0000107		 RGD
Ensembl		 PMID:27207958 GO_REF:0000107 NCBI chr 1:95,781,805...95,812,095
Ensembl chr 1:95,782,000...95,812,532 		JBrowse link
ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:17242276) RGD PMID:17242276 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923 		JBrowse link
G Cav3 caveolin 3 involved_in IMP PMID:22879586 BHF-UCL PMID:22879586 RGD:8553349 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137 		JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within ISO MGI:2445238 (MGI:1197846|PMID:9501070) RGD PMID:9501070 MGI:1197846 NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952 		JBrowse link
G Gpd1l1 glycerol-3-phosphate dehydrogenase 1 like 1 involved_in ISO (PMID:17967977), (PMID:19666841) RGD PMID:17967977 PMID:19666841 NCBI chr 8:114,591,103...114,620,771
Ensembl chr 8:114,588,487...114,620,723 		JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO
IBA		 (PMID:9354802)
PMID:21873635		 RGD PMID:9354802 PMID:21873635 RGD:13792537 NCBI chr11:31,580,951...31,594,116
Ensembl chr11:31,580,742...31,593,901 		JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in
acts_upstream_of_or_within		 ISO
IBA		 (PMID:10219239)
MGI:3699589 (MGI:3813163|PMID:18603586)
PMID:21873635		 RGD PMID:10219239 PMID:18603586 PMID:21873635 MGI:3813163, RGD:13792537 NCBI chr11:31,517,176...31,530,026
Ensembl chr11:31,295,614...31,530,043 		JBrowse link
G Kcne3 potassium voltage-gated channel subfamily E regulatory subunit 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:154,523,903...154,530,865
Ensembl chr 1:154,523,830...154,532,020 		JBrowse link
G Kcne4 potassium voltage-gated channel subfamily E regulatory subunit 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:80,243,429...80,251,533
Ensembl chr 9:80,247,379...80,250,979 		JBrowse link
G Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in ISO
IBA		 (PMID:21493962)
PMID:21873635		 RGD PMID:21493962 PMID:21873635 RGD:13792537 NCBI chr  X:105,930,398...105,931,013
Ensembl chr  X:105,930,398...105,931,013 		JBrowse link
G Kcnh2 potassium voltage-gated channel subfamily H member 2 involved_in ISO (PMID:21536673) RGD PMID:21536673 NCBI chr 4:10,826,834...10,859,009
Ensembl chr 4:10,826,928...10,859,008 		JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:8528244) RGD PMID:8528244 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669 		JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase involved_in IMP PMID:22879586 BHF-UCL PMID:22879586 RGD:8553349 NCBI chr18:58,393,759...58,726,709
Ensembl chr18:58,393,509...58,723,137 		JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:22889254) RGD PMID:22889254 NCBI chr11:84,661,783...84,727,730
Ensembl chr11:84,661,783...84,727,730 		JBrowse link
G Ryr2 ryanodine receptor 2 involved_in IEA
ISO		 GO_REF:0000107
(MGI:3820489|PMID:17872467)		 Ensembl
RGD		 PMID:17872467 GO_REF:0000107 MGI:3820489 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142 		JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in
acts_upstream_of_or_within		 IBA
ISO		 PMID:21873635
MGI:5294639 (MGI:5294649|PMID:19351516)
(PMID:20042427)		 RGD PMID:19351516 PMID:20042427 PMID:21873635 MGI:5294649, RGD:13792537 NCBI chr 8:40,630,372...40,652,869
Ensembl chr 8:40,630,455...40,652,868 		JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO
IEA		 (PMID:22529811)
GO_REF:0000107		 RGD
Ensembl		 PMID:22529811 GO_REF:0000107 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769 		JBrowse link
G Snta1 syntrophin, alpha 1 involved_in ISO (PMID:18591664) RGD PMID:18591664 NCBI chr 3:142,876,285...142,906,737
Ensembl chr 3:142,876,296...142,906,709 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19527
    multicellular organismal process 9158
      system process 3466
        muscle system process 483
          muscle contraction 344
            striated muscle contraction 200
              cardiac muscle contraction 148
                cardiac muscle cell contraction + 73
                negative regulation of cardiac muscle contraction + 5
                positive regulation of cardiac muscle contraction + 12
                regulation of cardiac muscle contraction + 80
paths to the root