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Gene: Sumo1 (small ubiquitin-like modifier 1) Rattus norvegicus
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Symbol: Sumo1
Name: small ubiquitin-like modifier 1
Description: Predicted to have several functions, including enzyme binding activity; protein C-terminus binding activity; and transcription factor binding activity. Predicted to be involved in several processes, including PML body organization; regulation of ion transmembrane transporter activity; and regulation of transcription, DNA-templated. Localizes to several cellular components, including the XY body; dendrite; and fibrillar center. Colocalizes with the PML body and heterochromatin. Human ortholog(s) of this gene implicated in orofacial cleft 10. Orthologous to human SUMO1 (small ubiquitin like modifier 1); PARTICIPATES IN sumoylation pathway; RNA transport pathway; INTERACTS WITH 2,4-dinitrotoluene; 2,6-dinitrotoluene; 3H-1,2-dithiole-3-thione.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: LOC301442; MGC109561; small ubiquitin-related modifier 1; small ubiquitin-related modifier-1; SMT3 suppressor of mif two 3 homolog 1; SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae); SMT3 suppressor of mif two 3 homolog 1 (yeast); SUMO-1; ubiquitin-like 1 (sentrin)
Orthologs:
Homo sapiens (human) : SUMO1 (small ubiquitin like modifier 1)  HGNC  Alliance
Mus musculus (house mouse) : Sumo1 (small ubiquitin-like modifier 1)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Sumo1 (small ubiquitin like modifier 1)
Pan paniscus (bonobo/pygmy chimpanzee) : SUMO1 (small ubiquitin like modifier 1)
Canis lupus familiaris (dog) : SUMO1 (small ubiquitin like modifier 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Sumo1 (small ubiquitin like modifier 1)
Sus scrofa (pig) : SUMO1 (small ubiquitin like modifier 1)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0966,453,428 - 66,483,614 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0966,258,853 - 66,288,103 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4958,212,538 - 58,242,760 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1958,359,520 - 58,389,742 (-)NCBI
Celera958,513,570 - 58,543,459 (-)NCBICelera
Cytogenetic Map9q31NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Sumo1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1306919
Created: 2005-01-12
Species: Rattus norvegicus
Last Modified: 2019-10-16
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.