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ONTOLOGY REPORT - ANNOTATIONS


Term:muscle contraction
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Accession:GO:0006936 term browser browse the term
Definition:A process in which force is generated within muscle tissue, resulting in a change in muscle geometry. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis.
Synonyms:xref: Wikipedia:Muscle_contraction


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muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta2 actin alpha 2, smooth muscle IDA RGD PMID:11953441 RGD:625414 NCBI chr 1:231,746,527...231,759,307
Ensembl chr 1:231,746,548...231,759,554
JBrowse link
G Actn2 actinin alpha 2 acts_upstream_of_or_within ISO (MGI:80083|PMID:8618961) RGD PMID:8618961 MGI:80083 NCBI chr17:58,143,334...58,210,622
Ensembl chr17:58,142,625...58,210,622
JBrowse link
G Actn3 actinin alpha 3 acts_upstream_of_or_within ISO (MGI:80083|PMID:8618961) RGD PMID:8618961 MGI:80083 NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012
JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:17418573)
MGI:1856326 (MGI:53849|PMID:4738109), (MGI:55861|PMID:6708966), (MGI:63173|PMID:6708965), (MGI:66718|PMID:8143864)
GO_REF:0000107
RGD
Ensembl
PMID:4738109 PMID:6708965 PMID:6708966 PMID:8143864 PMID:17418573 GO_REF:0000107 MGI:53849 MGI:55861 MGI:63173 MGI:66718 NCBI chr13:47,493,949...47,564,194
Ensembl chr13:47,493,949...47,564,318
JBrowse link
G Cald1 caldesmon 1 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 4:63,265,781...63,446,936
Ensembl chr 4:63,265,942...63,446,932
JBrowse link
G Cert1 ceramide transporter 1 acts_upstream_of_or_within ISO MGI:3837565 (MGI:3836857|PMID:19139267) RGD PMID:19139267 MGI:3836857 NCBI chr 2:27,882,546...27,987,090
Ensembl chr 2:27,882,555...27,987,074
JBrowse link
G Chrnb1 cholinergic receptor nicotinic beta 1 subunit involved_in ISO (PMID:8651643) RGD PMID:8651643 NCBI chr10:54,501,096...54,516,418
Ensembl chr10:54,501,093...54,516,345
JBrowse link
G Clcn1 chloride voltage-gated channel 1 involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:22521272), (PMID:26007199)
UniProt
Ensembl
RGD
PMID:22521272 PMID:26007199 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:71,171,949...71,201,483
Ensembl chr 4:71,172,547...71,199,984
JBrowse link
G Drd1 dopamine receptor D1 acts_upstream_of_or_within ISO MGI:2181426|MGI:3707260 (MGI:3703826|PMID:17360497) RGD PMID:17360497 MGI:3703826 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A acts_upstream_of_or_within ISO MGI:2182095|MGI:3514012 (MGI:3513875|PMID:15289441) RGD PMID:15289441 MGI:3513875 NCBI chr 3:140,040,359...140,060,107
Ensembl chr 3:140,040,278...140,060,743
JBrowse link
G Glra1 glycine receptor, alpha 1 involved_in ISO
ISS
(PMID:11973623)
PMID:2155780
RGD PMID:11973623 PMID:2155780 RGD:8553668 NCBI chr10:39,625,853...39,727,897
Ensembl chr10:39,629,459...39,727,162
JBrowse link
G Hsbp1 heat shock factor binding protein 1 IDA RGD PMID:14627610 RGD:1359067 NCBI chr19:47,401,039...47,405,373
Ensembl chr19:47,400,966...47,435,821
JBrowse link
G Lmod1 leiomodin 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:46,754,048...46,796,186
Ensembl chr13:46,754,033...46,794,900
JBrowse link
G Lmod2 leiomodin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:53,067,428...53,075,124
Ensembl chr 4:53,067,428...53,075,120
JBrowse link
G Lmod3 leiomodin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:129,843,964...129,858,684
Ensembl chr 4:129,843,970...129,858,244
JBrowse link
G Mybpc1 myosin binding protein C1 acts_upstream_of_or_within
involved_in
TAS
ISO
IEA
(MGI:80083|PMID:8618961)
GO_REF:0000107
RGD
Ensembl
PMID:8618961 PMID:15098652 GO_REF:0000107 MGI:80083, RGD:1302886 NCBI chr 7:22,930,350...23,015,981
Ensembl chr 7:22,930,350...23,015,957
JBrowse link
G Mybpc2 myosin binding protein C2 acts_upstream_of_or_within ISO (MGI:80083|PMID:8618961) RGD PMID:8618961 MGI:80083 NCBI chr 1:94,994,104...95,017,650
Ensembl chr 1:94,994,104...95,017,584
JBrowse link
G Mybpc3 myosin binding protein C3 acts_upstream_of_or_within ISO (MGI:80083|PMID:8618961) RGD PMID:8618961 MGI:80083 NCBI chr 3:77,095,165...77,113,406
Ensembl chr 3:77,095,252...77,113,405
JBrowse link
G Myh1 myosin heavy chain 1 IDA RGD PMID:16192301 RGD:1599030 NCBI chr10:51,885,913...51,909,699 JBrowse link
G Myh2 myosin heavy chain 2 involved_in ISO (PMID:8145163) RGD PMID:8145163 NCBI chr10:51,856,738...51,883,236
Ensembl chr10:51,856,738...51,883,236
JBrowse link
G Myh6 myosin heavy chain 6 involved_in IMP
ISO
(PMID:15621050) RGD PMID:15621050 PMID:15020307 PMID:15471982 RGD:1581168, RGD:1581170 NCBI chr15:28,418,120...28,442,316
Ensembl chr15:28,417,616...28,441,720
JBrowse link
G Myh7 myosin heavy chain 7 involved_in IMP
ISO
(PMID:15621050) RGD PMID:15621050 PMID:15020307 PMID:15471982 RGD:1581168, RGD:1581170 NCBI chr15:28,446,550...28,469,888
Ensembl chr15:28,446,550...28,468,217
JBrowse link
G Myl1 myosin, light chain 1 involved_in ISO (PMID:8145163) RGD PMID:8145163 NCBI chr 9:68,437,514...68,458,256
Ensembl chr 9:68,437,517...68,458,261
JBrowse link
G Myl3 myosin light chain 3 TAS RGD PMID:2717409 RGD:633442 NCBI chr 8:110,738,669...110,744,814
Ensembl chr 8:110,738,661...110,744,816
JBrowse link
G Myl6l myosin, light polypeptide 6, alkali, smooth muscle and non-muscle-like involved_in TAS PMID:2304459 HGNC-UCL PMID:2304459 RGD:8554813
G Mylk2 myosin light chain kinase 2 IEP RGD PMID:2839493 RGD:729267 NCBI chr 3:141,376,450...141,388,357
Ensembl chr 3:141,376,691...141,387,728
JBrowse link
G Mylpf myosin light chain, phosphorylatable, fast skeletal muscle TAS RGD PMID:14561531 RGD:1304445 NCBI chr 1:181,829,703...181,832,546
Ensembl chr 1:181,829,743...181,832,545
JBrowse link
G Myom1 myomesin 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:80083|PMID:8618961)
RGD PMID:8618961 PMID:21873635 MGI:80083, RGD:13792537 NCBI chr 9:110,916,156...111,039,344
Ensembl chr 9:110,915,943...111,039,344
JBrowse link
G Myom2 myomesin 2 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
(MGI:80083|PMID:8618961)
RGD PMID:8618961 PMID:21873635 MGI:80083, RGD:13792537 NCBI chr16:74,520,148...74,592,658
Ensembl chr16:74,520,157...74,592,772
JBrowse link
G Myom3 myomesin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:147,992,737...148,043,282
Ensembl chr 5:147,992,737...148,043,274
JBrowse link
G Ndufs6 NADH:ubiquinone oxidoreductase subunit S6 acts_upstream_of_or_within ISO MGI:4346527 (MGI:5319010|PMID:22474353) RGD PMID:22474353 MGI:5319010 NCBI chr 2:27,201,713...27,202,126
Ensembl chr 2:27,201,713...27,202,258
JBrowse link
G Nos1 nitric oxide synthase 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945
JBrowse link
G Ryr1 ryanodine receptor 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:2152826 (MGI:2665228|PMID:12704193), (MGI:3028707|PMID:12954602)
(MGI:67115|PMID:7515481)
UniProt
RGD
PMID:7515481 PMID:12704193 PMID:12954602 GO_REF:0000024 MGI:2665228 MGI:3028707 MGI:67115 NCBI chr 1:84,292,578...84,423,799
Ensembl chr 1:84,292,578...84,423,812
JBrowse link
G Scn7a sodium voltage-gated channel alpha subunit 7 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 3:51,335,841...51,438,308
Ensembl chr 3:51,335,841...51,438,256
JBrowse link
G Slmap sarcolemma associated protein involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr16:1,667,205...1,785,200
Ensembl chr16:1,667,208...1,785,149
JBrowse link
G Stac SH3 and cysteine rich domain acts_upstream_of_or_within ISO MGI:4365152 (MGI:5643852|PMID:23818578) RGD PMID:23818578 MGI:5643852 NCBI chr 8:111,530,800...111,653,228
Ensembl chr 8:111,530,800...111,654,008
JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:17043667) RGD PMID:17043667 NCBI chr  X:152,065,539...152,076,178
Ensembl chr  X:152,065,609...152,074,001
JBrowse link
G Tbx20 T-box transcription factor 20 acts_upstream_of_or_within ISO MGI:3579836 (MGI:3578574|PMID:15843414) RGD PMID:15843414 MGI:3578574 NCBI chr 8:23,200,104...23,258,218
Ensembl chr 8:23,204,507...23,258,175
JBrowse link
G Tmod1 tropomodulin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:2687078 (MGI:4440662|PMID:20368620)
PMID:21873635
Ensembl
RGD
PMID:20368620 PMID:21873635 GO_REF:0000107 MGI:4440662, RGD:13792537 NCBI chr 5:60,316,445...60,393,957
Ensembl chr 5:60,338,512...60,393,956
JBrowse link
G Tmod2 tropomodulin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:76,316,736...76,366,003
Ensembl chr 8:76,325,667...76,365,720
JBrowse link
G Tmod3 tropomodulin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:76,248,978...76,310,855
Ensembl chr 8:76,248,979...76,310,977
JBrowse link
G Tmod4 tropomodulin 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:182,695,709...182,700,540
Ensembl chr 2:182,695,709...182,700,540
JBrowse link
G Tnni1 troponin I1, slow skeletal type involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:47,229,217...47,241,640
Ensembl chr13:47,229,216...47,241,644
JBrowse link
G Tnni2 troponin I2, fast skeletal type involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:197,595,012...197,597,554
Ensembl chr 1:197,594,813...197,597,560
JBrowse link
G Tnni3 troponin I3, cardiac type involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:69,299,900...69,303,582
Ensembl chr 1:69,299,900...69,303,580
JBrowse link
G Tnnt1 troponin T1, slow skeletal type involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:69,306,362...69,316,721
Ensembl chr 1:69,306,362...69,316,721
JBrowse link
G Tnnt2 troponin T2, cardiac type acts_upstream_of_or_within
involved_in
TAS
ISO
IBA
IMP
(MGI:2675179|PMID:12832403)
PMID:21873635
RGD PMID:12832403 PMID:2760070 PMID:21873635 PMID:16644804 MGI:2675179, RGD:730096, RGD:13792537, RGD:1580425 NCBI chr13:47,267,325...47,285,390
Ensembl chr13:47,267,204...47,285,388
JBrowse link
G Tnnt3 troponin T3, fast skeletal type involved_in TAS
IBA
PMID:21873635 RGD
GO_Central
PMID:11940518 PMID:21873635 RGD:1299083, RGD:13792537 NCBI chr 1:197,652,535...197,669,736
Ensembl chr 1:197,652,431...197,669,535
JBrowse link
G Tpm1 tropomyosin 1 involved_in TAS
IBA
PMID:21873635 RGD
GO_Central
PMID:2022655 PMID:21873635 RGD:730217, RGD:13792537 NCBI chr 8:67,635,479...67,662,330
Ensembl chr 8:67,635,479...67,662,802
JBrowse link
G Tpm2 tropomyosin 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 5:57,770,919...57,780,278
Ensembl chr 5:57,770,864...57,779,992
JBrowse link
G Tpm3 tropomyosin 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:175,517,198...175,545,014
Ensembl chr 2:175,517,226...175,545,013
JBrowse link
G Tpm4 tropomyosin 4 involved_in TAS
IBA
PMID:21873635 RGD
GO_Central
PMID:2112608 PMID:21873635 RGD:729954, RGD:13792537 NCBI chr16:17,684,415...17,698,456
Ensembl chr16:17,683,195...17,705,984
JBrowse link
G Trim63 tripartite motif containing 63 acts_upstream_of_or_within IDA PMID:15601779 MGI PMID:15601779 RGD:8553397 NCBI chr 5:146,533,492...146,547,332
Ensembl chr 5:146,533,507...146,547,322
JBrowse link
G Ttn titin acts_upstream_of_or_within ISO MGI:1856953 (MGI:3604932|PMID:16115818) RGD PMID:16115818 MGI:3604932 NCBI chr 3:61,652,432...61,924,912 JBrowse link
artery smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IDA RGD PMID:21076237 RGD:5129195 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Bbs2 Bardet-Biedl syndrome 2 acts_upstream_of_or_within ISO MGI:3521669 (MGI:4867605|PMID:20852044) RGD PMID:20852044 MGI:4867605 NCBI chr19:10,909,653...10,944,998
Ensembl chr19:10,909,619...10,944,993
JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G IMP RGD PMID:18759855 RGD:2308879 NCBI chr10:79,354,998...79,422,960
Ensembl chr10:79,355,008...79,422,752
JBrowse link
G Cd38 CD38 molecule IMP RGD PMID:21431168 RGD:13506923 NCBI chr14:67,172,062...67,212,328
Ensembl chr14:67,172,063...67,211,986
JBrowse link
G Edn1 endothelin 1 involved_in IDA
ISO
(PMID:8982507) RGD PMID:8982507 PMID:7586220 RGD:8662314 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Edn2 endothelin 2 involved_in ISO
IEA
(PMID:8982507)
GO_REF:0000107
RGD
Ensembl
PMID:8982507 GO_REF:0000107 NCBI chr 5:133,751,316...133,756,814
Ensembl chr 5:133,751,217...133,756,814
JBrowse link
G Edn3 endothelin 3 NOT|involved_in ISO (PMID:8982507) RGD PMID:8982507 NCBI chr 3:163,562,307...163,586,636
Ensembl chr 3:163,562,520...163,585,093
JBrowse link
G Ednra endothelin receptor type A involved_in ISO
IEA
(PMID:8982507)
GO_REF:0000107
RGD
Ensembl
PMID:8982507 GO_REF:0000107 NCBI chr19:30,233,540...30,303,727
Ensembl chr19:30,233,571...30,297,049
JBrowse link
G Grip2 glutamate receptor interacting protein 2 acts_upstream_of_or_within ISO MGI:3035933 (MGI:5609934|PMID:23117660) RGD PMID:23117660 MGI:5609934 NCBI chr 4:124,271,456...124,356,538
Ensembl chr 4:124,271,456...124,321,268
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IMP RGD PMID:14752059 RGD:7257678 NCBI chr15:49,950,035...50,022,188
Ensembl chr15:49,950,804...50,020,928
JBrowse link
G Mkks MKKS centrosomal shuttling protein acts_upstream_of_or_within ISO MGI:3526444 (MGI:4867605|PMID:20852044) RGD PMID:20852044 MGI:4867605 NCBI chr 3:124,201,877...124,221,142
Ensembl chr 3:124,201,877...124,220,162
JBrowse link
G Scnn1b sodium channel epithelial 1 subunit beta involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2179831 (MGI:4356406|PMID:19553501)
Ensembl
RGD
PMID:19553501 GO_REF:0000107 MGI:4356406 NCBI chr 1:176,430,063...176,484,451
Ensembl chr 1:176,430,103...176,484,451
JBrowse link
G Smpd3 sphingomyelin phosphodiesterase 3 IMP RGD PMID:19088082 RGD:10042965 NCBI chr19:34,162,337...34,245,786
Ensembl chr19:34,162,341...34,245,749
JBrowse link
atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:17242276), (PMID:18832177), (PMID:21859974)
(MGI:5427070|PMID:21859974)
RGD PMID:17242276 PMID:18832177 PMID:21859974 MGI:5427070 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923
JBrowse link
G Kcna5 potassium voltage-gated channel subfamily A member 5 involved_in ISO (PMID:19343045), (PMID:23264583) RGD PMID:19343045 PMID:23264583 NCBI chr 4:159,354,689...159,358,173
Ensembl chr 4:159,350,097...159,357,697
JBrowse link
G Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in ISO (PMID:18313602) RGD PMID:18313602 NCBI chr  X:105,930,398...105,931,013
Ensembl chr  X:105,930,398...105,931,013
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:12522251) RGD PMID:12522251 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669
JBrowse link
G Nup155 nucleoporin 155 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3840086 (MGI:3839697|PMID:19070573)
Ensembl
RGD
PMID:19070573 GO_REF:0000107 MGI:3839697 NCBI chr 2:57,201,310...57,252,918
Ensembl chr 2:57,201,272...57,254,148
JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in ISO (PMID:21051419) RGD PMID:21051419 NCBI chr 8:40,630,372...40,652,869
Ensembl chr 8:40,630,455...40,652,868
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISS
ISO
GO_REF:0000024
(PMID:18065446)
BHF-UCL
RGD
PMID:18065446 GO_REF:0000024 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769
JBrowse link
cardiac muscle cell action potential involved in contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISO
ISS
(PMID:15454078)
GO_REF:0000024
RGD
BHF-UCL
PMID:15454078 GO_REF:0000024 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
JBrowse link
G Cacna1d calcium voltage-gated channel subunit alpha1 D involved_in ISO
IEA
(PMID:21131953)
GO_REF:0000107
RGD
Ensembl
PMID:21131953 GO_REF:0000107 NCBI chr16:5,227,157...5,521,163
Ensembl chr16:5,228,306...5,668,215
JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G involved_in ISS
ISO
GO_REF:0000024
(MGI:3714901|PMID:16690884)
BHF-UCL
RGD
PMID:16690884 GO_REF:0000024 MGI:3714901 NCBI chr10:79,354,998...79,422,960
Ensembl chr10:79,355,008...79,422,752
JBrowse link
G Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 involved_in ISO
IEA
(PMID:25527503)
GO_REF:0000107
RGD
Ensembl
PMID:25527503 GO_REF:0000107 NCBI chr 4:18,950,611...19,374,969
Ensembl chr 4:18,951,002...19,374,969
JBrowse link
G Kcnd3 potassium voltage-gated channel subfamily D member 3 acts_upstream_of_or_within ISO (MGI:6402838|PMID:32109384) RGD PMID:32109384 MGI:6402838 NCBI chr 2:192,937,950...193,155,345
Ensembl chr 2:192,937,950...193,155,345
JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO (PMID:10400998) RGD PMID:10400998 NCBI chr11:31,580,951...31,594,116
Ensembl chr11:31,580,742...31,593,901
JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in ISO (PMID:10219239) RGD PMID:10219239 NCBI chr11:31,517,176...31,530,026
Ensembl chr11:31,295,614...31,530,043
JBrowse link
G Kcnj2 potassium inwardly-rectifying channel, subfamily J, member 2 involved_in ISO (PMID:11371347) RGD PMID:11371347 NCBI chr10:96,060,849...96,071,401
Ensembl chr10:96,060,821...96,071,445
JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:22889254) RGD PMID:22889254 NCBI chr11:84,661,783...84,727,730 JBrowse link
G Scn1a sodium voltage-gated channel alpha subunit 1 involved_in ISO (PMID:27207958) RGD PMID:27207958 NCBI chr 3:50,952,790...51,071,804
Ensembl chr 3:50,952,791...51,071,699
JBrowse link
G Scn1b sodium voltage-gated channel beta subunit 1 involved_in ISO
IBA
(PMID:19808477)
PMID:21873635
RGD PMID:19808477 PMID:21873635 RGD:13792537 NCBI chr 1:86,353,917...86,363,836
Ensembl chr 1:86,353,917...86,363,739
JBrowse link
G Scn2b sodium voltage-gated channel beta subunit 2 involved_in ISO
IBA
(PMID:19808477)
PMID:21873635
RGD PMID:19808477 PMID:21873635 RGD:13792537 NCBI chr 8:45,425,629...45,437,765
Ensembl chr 8:45,425,629...45,437,765
JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in IBA
ISO
PMID:21873635
(PMID:21051419)
RGD PMID:21051419 PMID:21873635 RGD:13792537 NCBI chr 8:40,630,372...40,652,869
Ensembl chr 8:40,630,455...40,652,868
JBrowse link
G Scn4b sodium voltage-gated channel beta subunit 4 involved_in ISO
IBA
(PMID:17592081)
PMID:21873635
RGD PMID:17592081 PMID:21873635 RGD:13792537 NCBI chr 8:45,446,580...45,462,294
Ensembl chr 8:45,446,215...45,462,292
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in
acts_upstream_of_or_within
ISO
ISS
(PMID:21895525)
(MGI:6402838|PMID:32109384)
GO_REF:0000024
RGD
BHF-UCL
PMID:21895525 PMID:32109384 GO_REF:0000024 MGI:6402838 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769
JBrowse link
cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Camk2d calcium/calmodulin-dependent protein kinase II delta involved_in IDA PMID:12676814 BHF-UCL PMID:12676814 RGD:8656014 NCBI chr 2:215,023,785...215,287,351
Ensembl chr 2:215,024,004...215,286,178
JBrowse link
G Gsn gelsolin involved_in ISO (MGI:6450443|PMID:30568254) RGD PMID:30568254 MGI:6450443 NCBI chr 3:18,585,166...18,638,404
Ensembl chr 3:18,585,172...18,638,402
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha involved_in ISO (MGI:6450443|PMID:30568254) RGD PMID:30568254 MGI:6450443 NCBI chr 2:115,175,275...115,249,034
Ensembl chr 2:115,174,984...115,249,032
JBrowse link
G Sgcd sarcoglycan, delta acts_upstream_of_or_within ISO MGI:2154694 (MGI:1343715|PMID:10481911) RGD PMID:10481911 MGI:1343715 NCBI chr10:31,346,480...32,328,364
Ensembl chr10:31,280,511...31,724,840
JBrowse link
G Slc9a1 solute carrier family 9 member A1 IEP RGD PMID:20868366 RGD:7349316 NCBI chr 5:145,576,341...145,629,630
Ensembl chr 5:145,576,334...145,629,624
JBrowse link
G Uty ubiquitously transcribed tetratricopeptide repeat containing, Y-linked acts_upstream_of_or_within ISO (MGI:5305502|PMID:22192413) RGD PMID:22192413 MGI:5305502 NCBI chr  Y:942,838...1,105,313
Ensembl chr  Y:924,168...1,103,422
JBrowse link
cardiac muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actc1 actin, alpha, cardiac muscle 1 IDA RGD PMID:14551059 RGD:1600569 NCBI chr 3:100,811,987...100,817,523
Ensembl chr 3:100,811,987...100,817,523
JBrowse link
G Ank2 ankyrin 2 acts_upstream_of_or_within ISO (MGI:3056879|PMID:15262991) RGD PMID:15262991 MGI:3056879 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923
JBrowse link
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 involved_in TAS PMID:17442282 BHF-UCL PMID:17442282 RGD:6903343 NCBI chr 2:189,020,722...189,048,826
Ensembl chr 2:189,020,722...189,048,837
JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 involved_in IC PMID:17442282 BHF-UCL PMID:17442282 RGD:6903343 NCBI chr13:84,729,597...84,754,544
Ensembl chr13:84,729,601...84,754,544
JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 involved_in ISO (MGI:4352602|PMID:19376779) RGD PMID:19376779 MGI:4352602 NCBI chr 1:80,572,790...80,601,936
Ensembl chr 1:80,572,796...80,601,918
JBrowse link
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 involved_in ISO (MGI:4359299|PMID:19683723) RGD PMID:19683723 MGI:4359299 NCBI chr13:76,786,580...76,807,096
Ensembl chr13:76,786,578...76,807,459
JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta acts_upstream_of_or_within ISO (MGI:3528790|PMID:15652482) RGD PMID:15652482 MGI:3528790 NCBI chr 2:215,023,785...215,287,351
Ensembl chr 2:215,024,004...215,286,178
JBrowse link
G Casq2 calsequestrin 2 involved_in ISO
IEA
(PMID:16908766)
GO_REF:0000107
RGD
Ensembl
PMID:16908766 GO_REF:0000107 NCBI chr 2:189,526,003...189,582,276
Ensembl chr 2:189,525,960...189,582,267
JBrowse link
G Csrp3 cysteine and glycine rich protein 3 involved_in IEA
ISO
IBA
GO_REF:0000107
(MGI:2447926|PMID:12507422)
PMID:21873635
(PMID:12507422)
Ensembl
RGD
PMID:12507422 PMID:21873635 GO_REF:0000107 MGI:2447926, RGD:13792537 NCBI chr 1:98,528,067...98,546,647
Ensembl chr 1:98,528,068...98,546,653
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IMP RGD PMID:17010372 RGD:1600772 NCBI chr13:40,077,976...40,081,883
Ensembl chr13:40,077,976...40,081,883
JBrowse link
G Dmd dystrophin involved_in ISO (PMID:19027585) RGD PMID:19027585 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207
JBrowse link
G Gaa alpha glucosidase involved_in ISO
IEA
(PMID:10931430)
GO_REF:0000107
RGD
Ensembl
PMID:10931430 GO_REF:0000107 NCBI chr10:104,529,673...104,546,836
Ensembl chr10:104,529,747...104,546,836
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:15051637)
Ensembl
RGD
PMID:15051637 GO_REF:0000107 NCBI chr 1:201,581,480...201,601,580
Ensembl chr 1:201,581,480...201,601,582
JBrowse link
G Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in ISO (PMID:18313602) RGD PMID:18313602 NCBI chr  X:105,930,398...105,931,013
Ensembl chr  X:105,930,398...105,931,013
JBrowse link
G Kcnh2 potassium voltage-gated channel subfamily H member 2 involved_in ISO (PMID:21536673) RGD PMID:21536673 NCBI chr 4:10,826,834...10,859,009
Ensembl chr 4:10,826,928...10,859,008
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:8528244)
MGI:2389447 (MGI:3721200|PMID:17660684)
RGD PMID:8528244 PMID:17660684 MGI:3721200 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669
JBrowse link
G Map2k3 mitogen activated protein kinase kinase 3 acts_upstream_of_or_within ISO MGI:2385922|MGI:3581033 (MGI:2152033|PMID:11593045) RGD PMID:11593045 MGI:2152033 NCBI chr10:45,608,145...45,629,492
Ensembl chr10:45,607,163...45,629,492
JBrowse link
G Map2k6 mitogen-activated protein kinase kinase 6 acts_upstream_of_or_within ISO MGI:2385922|MGI:3581034 (MGI:2152033|PMID:11593045) RGD PMID:11593045 MGI:2152033 NCBI chr10:95,373,304...95,490,406
Ensembl chr10:95,373,204...95,488,293
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase acts_upstream_of_or_within ISO MGI:3041135 (MGI:5529574|PMID:23994610) RGD PMID:23994610 MGI:5529574 NCBI chr 4:45,790,456...45,898,139
Ensembl chr 4:45,790,791...45,897,876
JBrowse link
G Mtor mechanistic target of rapamycin kinase acts_upstream_of_or_within ISO MGI:3850506 (MGI:5632243|PMID:25139234) RGD PMID:25139234 MGI:5632243 NCBI chr 5:158,884,856...158,994,311
Ensembl chr 5:158,884,804...158,994,311
JBrowse link
G Mybpc3 myosin binding protein C3 involved_in
acts_upstream_of_or_within
IEP
ISO
PMID:8799143
MGI:2654420|MGI:3606208 (MGI:3616388|PMID:16380103), (MGI:3696622|PMID:16224063)
RGD PMID:16224063 PMID:16380103 PMID:8799143 MGI:3616388 MGI:3696622, RGD:8553425 NCBI chr 3:77,095,165...77,113,406
Ensembl chr 3:77,095,252...77,113,405
JBrowse link
G Myh6 myosin heavy chain 6 involved_in IEA
ISO
GO_REF:0000107
(MGI:1327483|PMID:9884344)
Ensembl
RGD
PMID:9884344 GO_REF:0000107 MGI:1327483 NCBI chr15:28,418,120...28,442,316
Ensembl chr15:28,417,616...28,441,720
JBrowse link
G Myh7 myosin heavy chain 7 involved_in ISO
IEA
(PMID:7883988)
GO_REF:0000107
RGD
Ensembl
PMID:7883988 GO_REF:0000107 NCBI chr15:28,446,550...28,469,888
Ensembl chr15:28,446,550...28,468,217
JBrowse link
G Myl1 myosin, light chain 1 IMP RGD PMID:9409484 RGD:1600167 NCBI chr 9:68,437,514...68,458,256
Ensembl chr 9:68,437,517...68,458,261
JBrowse link
G Myl2 myosin light chain 2 acts_upstream_of_or_within IMP
ISO
IDA
MGI:107956 (MGI:3604156|PMID:15308581) RGD PMID:15308581 PMID:9409484 PMID:11448842 PMID:12002261 MGI:3604156, RGD:1600167, RGD:1600178, RGD:1600170 NCBI chr12:34,454,223...34,468,554
Ensembl chr12:34,454,218...34,468,983
JBrowse link
G Myl3 myosin light chain 3 involved_in IDA
ISO
(PMID:16675844) RGD PMID:16675844 PMID:14659803 PMID:2044768 RGD:1598726, RGD:1600304 NCBI chr 8:110,738,669...110,744,814
Ensembl chr 8:110,738,661...110,744,816
JBrowse link
G Myl4 myosin, light chain 4 involved_in ISO
IEA
(PMID:14985854), (PMID:16675844)
GO_REF:0000107
RGD
Ensembl
PMID:14985854 PMID:16675844 GO_REF:0000107 NCBI chr10:89,449,456...89,485,365
Ensembl chr10:89,449,443...89,485,363
JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3042511 (MGI:4355491|PMID:19546853)
Ensembl
RGD
PMID:19546853 GO_REF:0000107 MGI:4355491 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
JBrowse link
G Ppp1r13l protein phosphatase 1, regulatory subunit 13 like acts_upstream_of_or_within ISO MGI:3575541 (MGI:3530389|PMID:15661756) RGD PMID:15661756 MGI:3530389 NCBI chr 1:79,010,997...79,030,714
Ensembl chr 1:79,011,745...79,030,712
JBrowse link
G Psen2 presenilin 2 acts_upstream_of_or_within ISO MGI:1930939 (MGI:3612568|PMID:16204356) RGD PMID:16204356 MGI:3612568 NCBI chr13:91,967,506...91,993,240
Ensembl chr13:91,967,983...91,993,174
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:10830164) RGD PMID:10830164 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142
JBrowse link
G Scn1b sodium voltage-gated channel beta subunit 1 involved_in ISO (PMID:19808477) RGD PMID:19808477 NCBI chr 1:86,353,917...86,363,836
Ensembl chr 1:86,353,917...86,363,739
JBrowse link
G Scn2b sodium voltage-gated channel beta subunit 2 involved_in ISO (PMID:19808477) RGD PMID:19808477 NCBI chr 8:45,425,629...45,437,765
Ensembl chr 8:45,425,629...45,437,765
JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in ISO (PMID:20042427), (PMID:21051419) RGD PMID:20042427 PMID:21051419 NCBI chr 8:40,630,372...40,652,869
Ensembl chr 8:40,630,455...40,652,868
JBrowse link
G Scn4b sodium voltage-gated channel beta subunit 4 involved_in ISO (PMID:17592081) RGD PMID:17592081 NCBI chr 8:45,446,580...45,462,294
Ensembl chr 8:45,446,215...45,462,292
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO
ISS
(PMID:18065446), (PMID:21895525), (PMID:22529811)
GO_REF:0000024
RGD
BHF-UCL
PMID:18065446 PMID:21895525 PMID:22529811 GO_REF:0000024 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769
JBrowse link
G Sgcd sarcoglycan, delta acts_upstream_of_or_within ISO MGI:2180193 (MGI:5790783|PMID:23695275) RGD PMID:23695275 MGI:5790783 NCBI chr10:31,346,480...32,328,364
Ensembl chr10:31,280,511...31,724,840
JBrowse link
G Slc8a1 solute carrier family 8 member A1 acts_upstream_of_or_within ISO MGI:97272 (MGI:3604156|PMID:15308581) RGD PMID:15308581 MGI:3604156 NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628
JBrowse link
G Smad5 SMAD family member 5 acts_upstream_of_or_within ISO MGI:2679443 (MGI:3709210|PMID:17456754) RGD PMID:17456754 MGI:3709210 NCBI chr17:7,862,332...7,891,678
Ensembl chr17:7,864,720...7,891,634
JBrowse link
G Srsf1 serine and arginine rich splicing factor 1 acts_upstream_of_or_within ISO MGI:97272|MGI:98283 (MGI:3528790|PMID:15652482) RGD PMID:15652482 MGI:3528790 NCBI chr10:72,838,926...72,859,066
Ensembl chr10:72,839,274...72,845,336
JBrowse link
G Tafazzin tafazzin, phospholipid-lysophospholipid transacylase involved_in ISO (PMID:17043667) RGD PMID:17043667 NCBI chr  X:152,065,539...152,076,178
Ensembl chr  X:152,065,609...152,074,001
JBrowse link
G Tcap titin-cap involved_in IBA
ISO
PMID:21873635
(PMID:12507422), (PMID:15582318)
RGD PMID:12507422 PMID:15582318 PMID:21873635 RGD:13792537 NCBI chr10:83,381,719...83,382,887
Ensembl chr10:83,381,719...83,382,887
JBrowse link
G Tnnc1 troponin C1, slow skeletal and cardiac type involved_in IMP
ISO
(PMID:15542288), (PMID:25771144) RGD PMID:15542288 PMID:25771144 PMID:9409484 RGD:1600167 NCBI chr16:6,400,801...6,405,419
Ensembl chr16:6,402,171...6,405,634
JBrowse link
G Tnni1 troponin I1, slow skeletal type involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:47,229,217...47,241,640
Ensembl chr13:47,229,216...47,241,644
JBrowse link
G Tnni2 troponin I2, fast skeletal type involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:197,595,012...197,597,554
Ensembl chr 1:197,594,813...197,597,560
JBrowse link
G Tnni3 troponin I3, cardiac type involved_in IMP
IBA
ISO
IDA
PMID:21873635
(PMID:11735257)
RGD PMID:11735257 PMID:9409484 PMID:21873635 PMID:14551059 PMID:11448842 RGD:1600167, RGD:13792537, RGD:1600569, RGD:1600178 NCBI chr 1:69,299,900...69,303,582
Ensembl chr 1:69,299,900...69,303,580
JBrowse link
G Tnnt2 troponin T2, cardiac type involved_in IDA
ISO
IBA
(PMID:25771144)
PMID:21873635
RGD PMID:25771144 PMID:11448842 PMID:21873635 RGD:1600178, RGD:13792537 NCBI chr13:47,267,325...47,285,390
Ensembl chr13:47,267,204...47,285,388
JBrowse link
G Tpm1 tropomyosin 1 involved_in IDA
IEA
ISO
IBA
GO_REF:0000107
(MGI:3802907|PMID:17556658)
(PMID:11136687)
PMID:21873635
Ensembl
RGD
PMID:11136687 PMID:17556658 PMID:14551059 PMID:21873635 GO_REF:0000107 MGI:3802907, RGD:1600569, RGD:13792537 NCBI chr 8:67,635,479...67,662,330
Ensembl chr 8:67,635,479...67,662,802
JBrowse link
G Tpm1_v1 tropomyosin 1, variant 1 IDA RGD PMID:14551059 RGD:1600569
G Tpm1_v2 tropomyosin 1, variant 2 IDA RGD PMID:14551059 RGD:1600569
G Tpm1_v3 tropomyosin 1, variant 3 IDA RGD PMID:14551059 RGD:1600569
G Tpm1_v4 tropomyosin 1, variant 4 IDA RGD PMID:14551059 RGD:1600569
G Tpm1_v5 tropomyosin 1, variant 5 IDA RGD PMID:14551059 RGD:1600569
G Tpm1_v6 tropomyosin 1, variant 6 IDA RGD PMID:14551059 RGD:1600569
G Tpm1_v7 tropomyosin 1, variant 7 IDA RGD PMID:14551059 RGD:1600569
G Tpm1_v8 tropomyosin 1, variant 8 IDA RGD PMID:14551059 RGD:1600569
G Tpm1_v9 tropomyosin 1, variant 9 IDA RGD PMID:14551059 RGD:1600569
G Ttn titin involved_in ISO (PMID:11846417) RGD PMID:11846417 NCBI chr 3:61,652,432...61,924,912 JBrowse link
G Vegfb vascular endothelial growth factor B acts_upstream_of_or_within ISO MGI:2178819 (MGI:1353384|PMID:10666423) RGD PMID:10666423 MGI:1353384 NCBI chr 1:204,172,297...204,178,046
Ensembl chr 1:204,172,225...204,177,944
JBrowse link
diaphragm contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 IDA RGD PMID:17362795 RGD:4145100 NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
JBrowse link
G Gaa alpha glucosidase involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:16917947)
MGI:2148550 (MGI:3618942|PMID:15169761)
GO_REF:0000107
RGD
Ensembl
PMID:15169761 PMID:16917947 GO_REF:0000107 MGI:3618942 NCBI chr10:104,529,673...104,546,836
Ensembl chr10:104,529,747...104,546,836
JBrowse link
G Tnnc1 troponin C1, slow skeletal and cardiac type IDA RGD PMID:14985239 RGD:1598612 NCBI chr16:6,400,801...6,405,419
Ensembl chr16:6,402,171...6,405,634
JBrowse link
esophagus smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sulf1 sulfatase 1 involved_in IEA
ISO
ISS
GO_REF:0000104
UniProtKB:Q8CFG0 (MGI:3722747|PMID:17720696)
GO_REF:0000024
UniProt
RGD
PMID:17720696 GO_REF:0000024 GO_REF:0000104 MGI:3722747 NCBI chr 5:6,362,896...6,526,174
Ensembl chr 5:6,362,911...6,525,584
JBrowse link
G Sulf2 sulfatase 2 involved_in ISO UniProtKB:Q8K007 (MGI:3722747|PMID:17720696) RGD PMID:17720696 MGI:3722747 NCBI chr 3:154,822,079...154,904,566
Ensembl chr 3:154,822,085...154,904,415
JBrowse link
fast-twitch skeletal muscle fiber contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Synm synemin involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5548847 (MGI:5661117|PMID:25567810)
RGD PMID:25567810 PMID:21873635 MGI:5661117, RGD:13792537 NCBI chr 1:121,333,712...121,363,652
Ensembl chr 1:121,333,720...121,363,652
JBrowse link
intestine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Htr1d 5-hydroxytryptamine receptor 1D involved_in ISO (PMID:9186750) RGD PMID:9186750 NCBI chr 5:148,655,979...148,676,534
Ensembl chr 5:148,674,495...148,675,619
JBrowse link
G Htr2b 5-hydroxytryptamine receptor 2B involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:7599919), (PMID:9186750)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:7599919 PMID:9186750 GO_REF:0000024 GO_REF:0000107 NCBI chr 9:86,735,793...86,756,640
Ensembl chr 9:86,742,102...86,755,108
JBrowse link
G Ptger3 prostaglandin E receptor 3 involved_in IMP
IBA
PMID:21873635 RGD
GO_Central
PMID:24170253 PMID:21873635 RGD:10043193, RGD:13792537 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
G Tacr2 tachykinin receptor 2 IMP RGD PMID:11275010 RGD:5147481 NCBI chr20:30,208,907...30,223,446
Ensembl chr20:30,208,907...30,223,446
JBrowse link
involuntary skeletal muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp8a2 ATPase phospholipid transporting 8A2 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr15:33,817,309...34,350,193
Ensembl chr15:33,819,755...34,350,223
JBrowse link
membrane depolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISO
IEA
ISS
(PMID:17224476)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
BHF-UCL
PMID:17224476 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
JBrowse link
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 involved_in ISS
ISO
IEA
GO_REF:0000024
(PMID:17224476)
GO_REF:0000107
BHF-UCL
RGD
Ensembl
PMID:17224476 GO_REF:0000024 GO_REF:0000107 NCBI chr17:77,564,630...77,910,000
Ensembl chr17:77,564,460...77,909,106
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO
IEA
(PMID:18065446)
GO_REF:0000107
RGD
Ensembl
PMID:18065446 GO_REF:0000107 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769
JBrowse link
membrane repolarization during atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcna5 potassium voltage-gated channel subfamily A member 5 involved_in ISO (PMID:19343045), (PMID:23264583) RGD PMID:19343045 PMID:23264583 NCBI chr 4:159,354,689...159,358,173
Ensembl chr 4:159,350,097...159,357,697
JBrowse link
G Kcnj5 potassium inwardly-rectifying channel, subfamily J, member 5 involved_in ISO (PMID:20560207) RGD PMID:20560207 NCBI chr 8:30,724,923...30,753,083
Ensembl chr 8:30,724,925...30,753,518
JBrowse link
G Kcnn2 potassium calcium-activated channel subfamily N member 2 involved_in ISO (MGI:5292192|PMID:19139040) RGD PMID:19139040 MGI:5292192 NCBI chr18:37,817,966...38,258,347
Ensembl chr18:37,817,957...38,258,347
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO
IEA
(PMID:12522251), (PMID:25786344)
GO_REF:0000107
RGD
Ensembl
PMID:12522251 PMID:25786344 GO_REF:0000107 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669
JBrowse link
membrane repolarization during ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnd3 potassium voltage-gated channel subfamily D member 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 2:192,937,950...193,155,345
Ensembl chr 2:192,937,950...193,155,345
JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO (PMID:9354802) RGD PMID:9354802 NCBI chr11:31,580,951...31,594,116
Ensembl chr11:31,580,742...31,593,901
JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in ISO (PMID:10219239) RGD PMID:10219239 NCBI chr11:31,517,176...31,530,026
Ensembl chr11:31,295,614...31,530,043
JBrowse link
G Kcne3 potassium voltage-gated channel subfamily E regulatory subunit 3 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 1:154,523,903...154,530,865
Ensembl chr 1:154,523,830...154,532,020
JBrowse link
G Kcne4 potassium voltage-gated channel subfamily E regulatory subunit 4 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr 9:80,243,429...80,251,533
Ensembl chr 9:80,247,379...80,250,979
JBrowse link
G Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr  X:105,930,398...105,931,013
Ensembl chr  X:105,930,398...105,931,013
JBrowse link
G Kcnh2 potassium voltage-gated channel subfamily H member 2 involved_in IEA
ISO
GO_REF:0000107
(PMID:21536673)
Ensembl
RGD
PMID:21536673 GO_REF:0000107 NCBI chr 4:10,826,834...10,859,009
Ensembl chr 4:10,826,928...10,859,008
JBrowse link
G Kcnj8 potassium inwardly-rectifying channel, subfamily J, member 8 involved_in ISO (PMID:20558321) RGD PMID:20558321 NCBI chr 4:175,508,908...175,515,829
Ensembl chr 4:175,508,912...175,515,603
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO
IBA
IEA
(PMID:8528244)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:8528244 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669
JBrowse link
muscle filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myh6 myosin heavy chain 6 involved_in IEA
ISO
GO_REF:0000107
(PMID:16088376)
Ensembl
RGD
PMID:16088376 GO_REF:0000107 NCBI chr15:28,418,120...28,442,316
Ensembl chr15:28,417,616...28,441,720
JBrowse link
G Myh7 myosin heavy chain 7 involved_in ISO
IEA
(PMID:16088376), (PMID:8514894)
GO_REF:0000107
RGD
Ensembl
PMID:8514894 PMID:16088376 GO_REF:0000107 NCBI chr15:28,446,550...28,469,888
Ensembl chr15:28,446,550...28,468,217
JBrowse link
G Myh8 myosin heavy chain 8 involved_in IEA
ISO
GO_REF:0000107
(PMID:17041932)
Ensembl
RGD
PMID:17041932 GO_REF:0000107 NCBI chr10:51,963,510...51,993,103
Ensembl chr10:51,963,510...51,993,232
JBrowse link
G Myl6l myosin, light polypeptide 6, alkali, smooth muscle and non-muscle-like involved_in TAS PMID:2304459 HGNC-UCL PMID:2304459 RGD:8554813
G Tnnt2 troponin T2, cardiac type involved_in ISO
ISS
(PMID:12186860), (PMID:15923195)
GO_REF:0000024
RGD
UniProt
PMID:12186860 PMID:15923195 GO_REF:0000024 NCBI chr13:47,267,325...47,285,390
Ensembl chr13:47,267,204...47,285,388
JBrowse link
G Tpm1 tropomyosin 1 involved_in IDA PMID:11136687 BHF-UCL PMID:11136687 RGD:1556479 NCBI chr 8:67,635,479...67,662,330
Ensembl chr 8:67,635,479...67,662,802
JBrowse link
negative regulation of cardiac muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pde5a phosphodiesterase 5A involved_in IEA
ISO
GO_REF:0000107
(MGI:3836877|PMID:19127022)
Ensembl
RGD
PMID:19127022 GO_REF:0000107 MGI:3836877 NCBI chr 2:210,858,515...211,003,480
Ensembl chr 2:210,858,063...210,999,701
JBrowse link
G Sri sorcin involved_in ISO (MGI:5319286|PMID:22326846) RGD PMID:22326846 MGI:5319286 NCBI chr 4:25,973,493...25,997,879
Ensembl chr 4:25,966,750...25,998,077
JBrowse link
G Zc3h12a zinc finger CCCH type containing 12A involved_in ISS
ISO
GO_REF:0000024
(MGI:5142149|PMID:21616078)
UniProt
RGD
PMID:21616078 GO_REF:0000024 MGI:5142149 NCBI chr 5:137,376,562...137,385,351
Ensembl chr 5:137,376,564...137,385,351
JBrowse link
negative regulation of membrane repolarization during ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcne3 potassium voltage-gated channel subfamily E regulatory subunit 3 involved_in ISO (PMID:22987075) RGD PMID:22987075 NCBI chr 1:154,523,903...154,530,865
Ensembl chr 1:154,523,830...154,532,020
JBrowse link
negative regulation of muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnnt1 troponin T1, slow skeletal type involved_in ISO (PMID:18032382) RGD PMID:18032382 NCBI chr 1:69,306,362...69,316,721
Ensembl chr 1:69,306,362...69,316,721
JBrowse link
negative regulation of muscle filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dbn1 drebrin 1 IDA RGD PMID:17543276 RGD:10398727 NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
JBrowse link
negative regulation of small intestine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 IMP RGD PMID:23647678 RGD:10412032 NCBI chr15:302,078...1,001,198
Ensembl chr15:302,214...1,001,198
JBrowse link
G Ptger4 prostaglandin E receptor 4 IMP RGD PMID:11991626 RGD:10003093 NCBI chr 2:54,330,563...54,347,451
Ensembl chr 2:54,335,424...54,346,670
JBrowse link
negative regulation of smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb1 adrenoceptor beta 1 IMP RGD PMID:18306009 RGD:5129131 NCBI chr 1:255,772,217...255,773,617
Ensembl chr 1:255,771,597...255,807,259
JBrowse link
G Adrb2 adrenoceptor beta 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
MGI:88398|MGI:98496 (MGI:2672939|PMID:12925702)
PMID:21873635
Ensembl
RGD
PMID:12925702 PMID:21873635 GO_REF:0000107 MGI:2672939, RGD:13792537 NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
JBrowse link
G Calca calcitonin-related polypeptide alpha acts_upstream_of_or_within IMP
ISO
(MGI:1098356|PMID:9322931) RGD PMID:9322931 PMID:11230364 MGI:1098356, RGD:68890 NCBI chr 1:168,878,212...168,883,176
Ensembl chr 1:168,878,214...168,883,105
JBrowse link
G Calcrl calcitonin receptor like receptor IMP RGD PMID:17363466 RGD:1625357 NCBI chr 3:69,428,348...69,525,910
Ensembl chr 3:69,430,120...69,525,910
JBrowse link
G Irag1 inositol 1,4,5-triphosphate receptor associated 1 acts_upstream_of_or_within ISO MGI:3525059 (MGI:3512693|PMID:15483626) RGD PMID:15483626 MGI:3512693 NCBI chr 1:164,981,716...165,094,232
Ensembl chr 1:164,981,716...165,094,176
JBrowse link
G Ncf1 neutrophil cytosolic factor 1 acts_upstream_of_or_within ISO MGI:1934143 (MGI:3771783|PMID:17993584) RGD PMID:17993584 MGI:3771783 NCBI chr12:22,485,382...22,494,647
Ensembl chr12:22,485,451...22,494,646
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 acts_upstream_of_or_within ISO MGI:2181586 (MGI:3512693|PMID:15483626) RGD PMID:15483626 MGI:3512693 NCBI chr 1:228,409,883...229,638,794 JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IMP RGD PMID:21051526 RGD:5135055 NCBI chr13:62,164,080...62,169,770
Ensembl chr13:62,163,932...62,172,188
JBrowse link
negative regulation of striated muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arg2 arginase 2 IMP RGD PMID:16537391 RGD:1582129 NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378
JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within ISO MGI:2451291 (MGI:3688972|PMID:11507009) RGD PMID:11507009 MGI:3688972 NCBI chr13:84,729,597...84,754,544
Ensembl chr13:84,729,601...84,754,544
JBrowse link
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 involved_in ISO
ISS
(PMID:10914677)
GO_REF:0000024
RGD
UniProt
PMID:10914677 GO_REF:0000024 NCBI chr 1:181,026,606...181,044,859 JBrowse link
G Grk2 G protein-coupled receptor kinase 2 involved_in ISO
IEA
(PMID:15051637)
GO_REF:0000107
RGD
Ensembl
PMID:15051637 GO_REF:0000107 NCBI chr 1:201,581,480...201,601,580
Ensembl chr 1:201,581,480...201,601,582
JBrowse link
negative regulation of uterine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra2a adrenoceptor alpha 2A IMP RGD PMID:17664026 RGD:6893570 NCBI chr 1:253,061,480...253,064,280
Ensembl chr 1:253,060,218...253,064,365
JBrowse link
G Adra2c adrenoceptor alpha 2C IMP RGD PMID:17664026 RGD:6893570 NCBI chr14:75,471,143...75,472,846
Ensembl chr14:75,471,143...75,472,846
JBrowse link
negative regulation of vascular associated smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap42 Rho GTPase activating protein 42 acts_upstream_of_or_within ISO MGI:3871380 (MGI:5638847|PMID:24335996) RGD PMID:24335996 MGI:5638847 NCBI chr 8:6,154,759...6,384,497
Ensembl chr 8:6,156,865...6,384,870
JBrowse link
G Dock4 dedicator of cytokinesis 4 involved_in ISO (PMID:22158624) RGD PMID:22158624 NCBI chr 6:57,512,929...57,902,597
Ensembl chr 6:57,512,908...57,901,855
JBrowse link
G Dock5 dedicator of cytokinesis 5 involved_in ISO (PMID:22158624) RGD PMID:22158624 NCBI chr15:41,979,728...42,158,733
Ensembl chr15:41,979,729...42,158,649
JBrowse link
negative regulation of ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bin1 bridging integrator 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5583915|PMID:24836577)
Ensembl
RGD
PMID:24836577 GO_REF:0000107 MGI:5583915 NCBI chr18:24,009,731...24,067,267
Ensembl chr18:24,009,653...24,067,263
JBrowse link
neurotransmitter secretion involved in regulation of skeletal muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr4a1 nuclear receptor subfamily 4, group A, member 1 IMP RGD PMID:29530712 RGD:40924655 NCBI chr 7:132,368,399...132,389,300
Ensembl chr 7:132,374,840...132,389,297
JBrowse link
peristalsis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen acts_upstream_of_or_within ISO MGI:2183545 (MGI:1313232|PMID:9788961) RGD PMID:9788961 MGI:1313232 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3699270 (MGI:3699022|PMID:17172448)
Ensembl
RGD
PMID:17172448 GO_REF:0000107 MGI:3699022 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689
JBrowse link
G Drd1 dopamine receptor D1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:94924 (MGI:3050733|PMID:15272078)
Ensembl
RGD
PMID:15272078 GO_REF:0000107 MGI:3050733 NCBI chr17:10,540,440...10,544,971
Ensembl chr17:10,540,558...10,545,002
JBrowse link
G Drd2 dopamine receptor D2 acts_upstream_of_or_within ISO MGI:2388386|MGI:99578 (MGI:3050733|PMID:15272078), (MGI:3617964|PMID:16525059) RGD PMID:15272078 PMID:16525059 MGI:3050733 MGI:3617964 NCBI chr 8:49,708,903...49,772,888
Ensembl chr 8:49,708,927...49,772,875
JBrowse link
G Gdnf glial cell derived neurotrophic factor involved_in
acts_upstream_of_or_within
ISS
ISO
IEA
GO_REF:0000024
MGI:2136846 (MGI:2157194|PMID:11774071)
(MGI:81287|PMID:8657307)
GO_REF:0000107
UniProt
RGD
Ensembl
PMID:8657307 PMID:11774071 GO_REF:0000024 GO_REF:0000107 MGI:2157194 MGI:81287 NCBI chr 2:56,893,992...56,919,935
Ensembl chr 2:56,895,010...56,917,209
JBrowse link
G Neurog1 neurogenin 1 involved_in ISO UniProtKB:Q6ZNK6|UniProtKB:Q8TF63 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,362,878...8,364,397
Ensembl chr17:8,362,821...8,364,571
JBrowse link
G Npy1r neuropeptide Y receptor Y1 IMP RGD PMID:12919938 RGD:1642317 NCBI chr16:23,037,788...23,047,330
Ensembl chr16:23,037,789...23,046,759
JBrowse link
G P2rx2 purinergic receptor P2X 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2687349 (MGI:3615722|PMID:12937291)
Ensembl
RGD
PMID:12937291 GO_REF:0000107 MGI:3615722 NCBI chr12:46,338,979...46,342,891
Ensembl chr12:46,339,549...46,342,891
JBrowse link
G P2rx3 purinergic receptor P2X 3 acts_upstream_of_or_within ISO MGI:1934019 (MGI:3614934|PMID:12813150) RGD PMID:12813150 MGI:3614934 NCBI chr 3:70,080,850...70,124,664
Ensembl chr 3:70,080,851...70,125,178
JBrowse link
G Sstr2 somatostatin receptor 2 IMP RGD PMID:12504886 RGD:727490 NCBI chr10:98,664,204...98,671,370
Ensembl chr10:98,664,216...98,674,351
JBrowse link
G Tifab TIFA inhibitor involved_in ISO UniProtKB:Q8TF63|UniProtKB:Q92886 (PMID:23419067) RGD PMID:23419067 NCBI chr17:8,433,406...8,436,541
Ensembl chr17:8,431,635...8,436,592
JBrowse link
positive regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 IMP RGD PMID:23954346 RGD:10003031 NCBI chr 1:95,781,805...95,812,095
Ensembl chr 1:95,782,000...95,812,532
JBrowse link
positive regulation of cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 1:181,026,606...181,044,859 JBrowse link
G Cacna1h calcium voltage-gated channel subunit alpha1 H IMP RGD PMID:19443576 RGD:7205486 NCBI chr10:14,390,104...14,448,204
Ensembl chr10:14,390,113...14,448,376
JBrowse link
positive regulation of cardiac muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin I converting enzyme 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:2181229|PMID:12075344)
Ensembl
RGD
PMID:12075344 GO_REF:0000107 MGI:2181229 NCBI chr  X:30,293,597...30,340,961
Ensembl chr  X:30,293,589...30,340,977
JBrowse link
G Adra1a adrenoceptor alpha 1A involved_in IMP PMID:19011682 BHF-UCL PMID:19011682 RGD:5688340 NCBI chr15:40,830,125...40,935,902
Ensembl chr15:40,832,534...40,927,500
JBrowse link
G Ccn2 cellular communication network factor 2 IMP RGD PMID:19707545 RGD:2314476 NCBI chr 1:20,802,199...20,805,315
Ensembl chr 1:20,802,199...20,805,734
JBrowse link
G Chga chromogranin A involved_in IDA PMID:22459152 UniProt PMID:22459152 RGD:6906968 NCBI chr 6:121,696,051...121,707,399
Ensembl chr 6:121,696,051...121,707,398
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 IEP RGD PMID:21620734 RGD:5686387 NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:19646991)
Ensembl
RGD
PMID:19646991 GO_REF:0000107 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669
JBrowse link
G Nppa natriuretic peptide A involved_in ISO (PMID:19646991) RGD PMID:19646991 NCBI chr 5:158,429,042...158,430,351
Ensembl chr 5:158,429,042...158,430,351
JBrowse link
G Rgs2 regulator of G-protein signaling 2 involved_in ISO (MGI:3836877|PMID:19127022), (MGI:5009116|PMID:21291891) RGD PMID:19127022 PMID:21291891 MGI:3836877 MGI:5009116 NCBI chr13:55,799,749...55,802,354
Ensembl chr13:55,798,829...55,802,385
JBrowse link
G Smtn smoothelin acts_upstream_of_or_within ISO MGI:3613292|MGI:3613293 (MGI:4437553|PMID:18678771) RGD PMID:18678771 MGI:4437553 NCBI chr14:78,398,595...78,420,908
Ensembl chr14:78,397,778...78,420,886
JBrowse link
G Ucn urocortin IDA RGD PMID:19460778 RGD:5508168 NCBI chr 6:25,238,120...25,238,950
Ensembl chr 6:25,238,120...25,238,950
JBrowse link
positive regulation of colon smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kit KIT proto-oncogene receptor tyrosine kinase IMP RGD PMID:17322067 RGD:12910822 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:24170253 RGD:10043193 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
positive regulation of fast-twitch skeletal muscle fiber contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3778600|PMID:18178581) RGD PMID:18178581 MGI:3778600 NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012
JBrowse link
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 involved_in ISO
ISS
(PMID:12479237)
GO_REF:0000024
RGD
UniProt
PMID:12479237 GO_REF:0000024 NCBI chr 1:181,026,606...181,044,859 JBrowse link
G Mylk2 myosin light chain kinase 2 IMP RGD PMID:12748068 RGD:1580242 NCBI chr 3:141,376,450...141,388,357
Ensembl chr 3:141,376,691...141,387,728
JBrowse link
positive regulation of gastro-intestinal system smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide IDA RGD PMID:15890336 RGD:12907565 NCBI chr 4:146,865,712...146,869,621
Ensembl chr 4:146,865,712...146,869,621
JBrowse link
G Ptafr platelet-activating factor receptor IMP RGD PMID:10821044 RGD:10043148 NCBI chr 5:144,765,770...144,795,057
Ensembl chr 5:144,765,976...144,795,251
JBrowse link
G Spx spexin hormone involved_in ISO
IBA
ISS
(PMID:17284679)
PMID:21873635
RGD PMID:17284679 PMID:21873635 PMID:17284679 RGD:13792537, RGD:12907558 NCBI chr 4:175,356,044...175,362,082
Ensembl chr 4:175,356,247...175,362,082
JBrowse link
positive regulation of hindgut contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:19258489 RGD:2304084 NCBI chr 3:117,782,650...117,783,490
Ensembl chr 3:117,782,650...117,783,490
JBrowse link
G Pawr pro-apoptotic WT1 regulator IDA RGD PMID:14724155 RGD:9835340 NCBI chr 7:43,645,028...43,725,033
Ensembl chr 7:43,645,084...43,725,028
JBrowse link
positive regulation of muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eno1 enolase 1 involved_in ISO UniProtKB:Q01986 (PMID:15459207) RGD PMID:15459207 NCBI chr 5:160,719,951...160,731,337
Ensembl chr 5:160,719,951...160,731,336
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 involved_in IGI
IMP
PMID:15459207 CAFA PMID:15459207 PMID:15459207 RGD:12793039, RGD:12793039 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
JBrowse link
positive regulation of pyloric antrum smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kit KIT proto-oncogene receptor tyrosine kinase IMP RGD PMID:9832052 RGD:12910753 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
JBrowse link
positive regulation of small intestine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghrl ghrelin and obestatin prepropeptide IDA RGD PMID:15890336 PMID:21874246 RGD:12907565, RGD:12910732 NCBI chr 4:146,865,712...146,869,621
Ensembl chr 4:146,865,712...146,869,621
JBrowse link
G Ghsr growth hormone secretagogue receptor IMP RGD PMID:21874246 PMID:15890336 RGD:12910732, RGD:12907565 NCBI chr 2:110,268,489...110,271,865
Ensembl chr 2:110,268,489...110,271,865
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IMP RGD PMID:7542218 RGD:12910748 NCBI chr14:32,547,459...32,624,694
Ensembl chr14:32,548,877...32,624,652
JBrowse link
positive regulation of smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ada adenosine deaminase acts_upstream_of_or_within ISO MGI:1857117|MGI:2683027 (MGI:3794903|PMID:18340377) RGD PMID:18340377 MGI:3794903 NCBI chr 3:152,398,745...152,422,854
Ensembl chr 3:152,398,747...152,447,088
JBrowse link
G Adra1a adrenoceptor alpha 1A involved_in IMP
ISO
(MGI:4947862|PMID:21335239) RGD PMID:21335239 PMID:19041301 MGI:4947862, RGD:5688345 NCBI chr15:40,830,125...40,935,902
Ensembl chr15:40,832,534...40,927,500
JBrowse link
G Chrm3 cholinergic receptor, muscarinic 3 acts_upstream_of_or_within ISO (MGI:2672939|PMID:12925702) RGD PMID:12925702 MGI:2672939 NCBI chr17:60,005,137...60,467,250
Ensembl chr17:60,005,202...60,467,278
JBrowse link
G Cttn cortactin involved_in ISO UniProtKB:P07737 (PMID:24700464) RGD PMID:24700464 NCBI chr 1:199,599,710...199,635,254
Ensembl chr 1:199,599,710...199,635,164
JBrowse link
G Edn1 endothelin 1 acts_upstream_of_or_within IDA
ISO
IMP
(MGI:66444|PMID:8010105) RGD PMID:8010105 PMID:12396026 PMID:8893723 MGI:66444, RGD:1581797, RGD:8662282 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Edn2 endothelin 2 acts_upstream_of_or_within
involved_in
IDA
ISO
IEA
(MGI:65983|PMID:2768235)
GO_REF:0000107
RGD
Ensembl
PMID:2768235 PMID:12396026 GO_REF:0000107 MGI:65983, RGD:1581797 NCBI chr 5:133,751,316...133,756,814
Ensembl chr 5:133,751,217...133,756,814
JBrowse link
G F2r coagulation factor II (thrombin) receptor IDA RGD PMID:14699501 RGD:1582292 NCBI chr 2:26,869,343...26,885,856
Ensembl chr 2:26,868,404...26,885,870
JBrowse link
G Itga2 integrin subunit alpha 2 IMP SMC-containing collagen lattice contraction RGD PMID:16263112 RGD:2307398 NCBI chr 2:46,520,345...46,621,487
Ensembl chr 2:46,523,948...46,621,481
JBrowse link
G Myocd myocardin involved_in ISO
IEA
(PMID:17215356)
GO_REF:0000107
RGD
Ensembl
PMID:17215356 GO_REF:0000107 NCBI chr10:49,833,219...49,928,806
Ensembl chr10:49,836,641...49,927,627
JBrowse link
G Nmu neuromedin U involved_in IMP
IBA
IDA
PMID:21873635
PMID:3178840
RGD
GO_Central
UniProt
PMID:16474416 PMID:21873635 PMID:3178840 RGD:1642122, RGD:13792537, RGD:13461757 NCBI chr14:31,844,564...31,872,196
Ensembl chr14:31,844,728...31,872,192
JBrowse link
G Npnt nephronectin involved_in ISO (MGI:4947862|PMID:21335239) RGD PMID:21335239 MGI:4947862 NCBI chr 2:221,391,151...221,459,527
Ensembl chr 2:221,391,153...221,459,401
JBrowse link
G Npy2r neuropeptide Y receptor Y2 IMP neuropeptide Y- and peptide YY-induced contraction in ascending and descending colon RGD PMID:10422644 RGD:1642606 NCBI chr 2:167,901,999...167,912,165
Ensembl chr 2:167,903,879...167,905,024
JBrowse link
G Prok2 prokineticin 2 involved_in ISO
IEA
(PMID:11259612)
GO_REF:0000107
RGD
Ensembl
PMID:11259612 GO_REF:0000107 NCBI chr 4:132,346,681...132,361,754
Ensembl chr 4:132,347,103...132,361,385
JBrowse link
G Ptafr platelet-activating factor receptor IMP RGD PMID:10821044 RGD:10043148 NCBI chr 5:144,765,770...144,795,057
Ensembl chr 5:144,765,976...144,795,251
JBrowse link
G Ptgs1 prostaglandin-endoperoxide synthase 1 IMP RGD PMID:18480553 RGD:2300247 NCBI chr 3:19,584,015...19,605,589
Ensembl chr 3:19,584,015...19,605,586
JBrowse link
G Ptgs2 prostaglandin-endoperoxide synthase 2 IMP RGD PMID:18480553 RGD:2300247 NCBI chr13:62,164,080...62,169,770
Ensembl chr13:62,163,932...62,172,188
JBrowse link
G Rhoa ras homolog family member A IMP RGD PMID:17379756 RGD:1642962 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
G Sphk1 sphingosine kinase 1 involved_in ISO
IEA
(PMID:12847068)
GO_REF:0000107
RGD
Ensembl
PMID:12847068 GO_REF:0000107 NCBI chr10:101,758,567...101,764,240
Ensembl chr10:101,758,711...101,764,240
JBrowse link
G Srf serum response factor involved_in ISO (PMID:17215356) RGD PMID:17215356 NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
JBrowse link
G Tbxa2r thromboxane A2 receptor acts_upstream_of_or_within ISO (MGI:2672939|PMID:12925702) RGD PMID:12925702 MGI:2672939 NCBI chr 7:8,383,347...8,390,753
Ensembl chr 7:8,383,378...8,388,176
JBrowse link
positive regulation of smooth muscle contraction involved in micturition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:18562635 RGD:10043314 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
positive regulation of stomach fundus smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nmu neuromedin U involved_in IDA PMID:2055247 UniProt PMID:2055247 RGD:13461751 NCBI chr14:31,844,564...31,872,196
Ensembl chr14:31,844,728...31,872,192
JBrowse link
positive regulation of striated muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 acts_upstream_of_or_within ISO MGI:2451290 (MGI:3688972|PMID:11507009) RGD PMID:11507009 MGI:3688972 NCBI chr 2:189,020,722...189,048,826
Ensembl chr 2:189,020,722...189,048,837
JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 IMP RGD PMID:32706268 RGD:38549369 NCBI chr12:41,938,533...41,977,517
Ensembl chr12:41,938,560...41,977,517
JBrowse link
positive regulation of uterine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abat 4-aminobutyrate aminotransferase IMP RGD PMID:12742000 RGD:10047059 NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835
JBrowse link
G Adra2b adrenoceptor alpha 2B IMP RGD PMID:19634638 PMID:17664026 RGD:2313546, RGD:6893570 NCBI chr 3:114,585,174...114,589,220
Ensembl chr 3:114,585,169...114,589,355
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 involved_in ISO
IEA
ISS
(PMID:21427217)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:21427217 GO_REF:0000024 GO_REF:0000107 NCBI chr12:15,217,217...15,222,679
Ensembl chr12:15,217,442...15,221,889
JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase IMP RGD PMID:19208792 RGD:2316554 NCBI chr 5:141,888,319...141,916,992
Ensembl chr 5:141,888,326...141,903,794
JBrowse link
G Oxt oxytocin/neurophysin I prepropeptide IDA RGD PMID:19164477 RGD:2303954 NCBI chr 3:117,782,650...117,783,490
Ensembl chr 3:117,782,650...117,783,490
JBrowse link
G Oxtr oxytocin receptor IMP RGD PMID:19164477 RGD:2303954 NCBI chr 4:145,598,549...145,614,674
Ensembl chr 4:145,599,561...145,614,674
JBrowse link
G Tacr1 tachykinin receptor 1 IDA RGD PMID:12390879 RGD:2305937 NCBI chr 4:114,920,844...115,089,733
Ensembl chr 4:114,920,844...115,089,733
JBrowse link
G Tacr2 tachykinin receptor 2 IDA RGD PMID:12390879 RGD:2305937 NCBI chr20:30,208,907...30,223,446
Ensembl chr20:30,208,907...30,223,446
JBrowse link
G Tacr3 tachykinin receptor 3 IDA RGD PMID:12390879 RGD:2305937 NCBI chr 2:223,266,536...223,363,791
Ensembl chr 2:223,266,536...223,363,791
JBrowse link
positive regulation of vascular associated smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrm3 cholinergic receptor, muscarinic 3 IMP RGD PMID:8428203 RGD:2303387 NCBI chr17:60,005,137...60,467,250
Ensembl chr17:60,005,202...60,467,278
JBrowse link
G Rhoa ras homolog family member A acts_upstream_of_or_within ISO (MGI:5638847|PMID:24335996) RGD PMID:24335996 MGI:5638847 NCBI chr 8:108,991,926...109,025,746
Ensembl chr 8:108,991,954...109,025,746
JBrowse link
positive regulation of voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rnf207 ring finger protein 207 involved_in ISO (PMID:25281747) RGD PMID:25281747 NCBI chr 5:162,815,351...162,828,325
Ensembl chr 5:162,815,357...162,828,375
JBrowse link
regulation of atrial cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:12571597)
(MGI:2449848|PMID:12571597)
RGD PMID:12571597 MGI:2449848 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923
JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO (PMID:23348765) RGD PMID:23348765 NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO
IEA
(PMID:17875969)
GO_REF:0000107
RGD
Ensembl
PMID:17875969 GO_REF:0000107 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142
JBrowse link
regulation of cardiac muscle cell action potential involved in regulation of contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akap9 A-kinase anchoring protein 9 involved_in ISO (PMID:18093912) RGD PMID:18093912 NCBI chr 4:30,056,738...30,192,716
Ensembl chr 4:30,056,738...30,192,606
JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in IDA PMID:9851937 BHF-UCL PMID:9851937 RGD:10047146 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101
JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta involved_in IC PMID:12676813 BHF-UCL PMID:12676813 RGD:10047271 NCBI chr 2:215,023,785...215,287,351
Ensembl chr 2:215,024,004...215,286,178
JBrowse link
G Cav3 caveolin 3 involved_in ISO (PMID:17060380) RGD PMID:17060380 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137
JBrowse link
G Fgf13 fibroblast growth factor 13 involved_in ISO (MGI:5437408|PMID:21817159) RGD PMID:21817159 MGI:5437408 NCBI chr  X:137,276,498...137,800,056
Ensembl chr  X:137,276,511...137,800,391
JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 involved_in ISO
IEA
(PMID:16407510)
GO_REF:0000107
RGD
Ensembl
PMID:16407510 GO_REF:0000107 NCBI chr 8:59,222,206...59,259,626
Ensembl chr 8:59,221,653...59,259,639
JBrowse link
G Rangrf RAN guanine nucleotide release factor involved_in ISO (PMID:21621375) RGD PMID:21621375 NCBI chr10:53,677,467...53,678,880
Ensembl chr10:53,677,467...53,678,840
JBrowse link
regulation of cardiac muscle cell contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IDA RGD PMID:19525381 RGD:2317914 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801
JBrowse link
G Adrb1 adrenoceptor beta 1 IMP
IDA
RGD PMID:22216755 PMID:19525381 RGD:6893639, RGD:2317914 NCBI chr 1:255,772,217...255,773,617
Ensembl chr 1:255,771,597...255,807,259
JBrowse link
G Akap6 A-kinase anchoring protein 6 involved_in IMP PMID:11179196 BHF-UCL PMID:11179196 RGD:8553373 NCBI chr 6:70,184,101...70,624,369
Ensembl chr 6:70,184,175...70,619,738
JBrowse link
G Ank2 ankyrin 2 involved_in ISO UniProtKB:Q8C8R3 (PMID:17242276)
(MGI:3771114|PMID:17242276)
RGD PMID:17242276 MGI:3771114 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923
JBrowse link
G Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 IMP RGD PMID:15629895 RGD:6903236 NCBI chr 2:189,020,722...189,048,826
Ensembl chr 2:189,020,722...189,048,837
JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 IMP RGD PMID:17442282 RGD:6903343 NCBI chr13:84,729,597...84,754,544
Ensembl chr13:84,729,601...84,754,544
JBrowse link
G Casq2 calsequestrin 2 involved_in IMP PMID:17569730 BHF-UCL PMID:17569730 RGD:2314601 NCBI chr 2:189,526,003...189,582,276
Ensembl chr 2:189,525,960...189,582,267
JBrowse link
G Fxyd1 FXYD domain-containing ion transport regulator 1 IMP RGD PMID:14684371 RGD:9685468 NCBI chr 1:86,287,163...86,291,478
Ensembl chr 1:86,287,165...86,291,278
JBrowse link
G Gata4 GATA binding protein 4 IMP RGD PMID:21702924 RGD:7207043 NCBI chr15:37,459,601...37,531,291
Ensembl chr15:37,459,601...37,505,636
JBrowse link
G Kcnj2 potassium inwardly-rectifying channel, subfamily J, member 2 IMP RGD PMID:22426100 RGD:7247430 NCBI chr10:96,060,849...96,071,401
Ensembl chr10:96,060,821...96,071,445
JBrowse link
G Pde4b phosphodiesterase 4B involved_in IEA
ISO
GO_REF:0000107
(MGI:5286798|PMID:21670503)
Ensembl
RGD
PMID:21670503 GO_REF:0000107 MGI:5286798 NCBI chr 5:116,799,827...117,367,707
Ensembl chr 5:116,799,971...117,367,696
JBrowse link
G Pde4d phosphodiesterase 4D involved_in IMP
ISO
IBA
(MGI:5286798|PMID:21670503), (MGI:5442270|PMID:21903937)
PMID:21873635
PMID:19801680
RGD PMID:21670503 PMID:21903937 PMID:19801680 PMID:21873635 PMID:19801680 MGI:5286798 MGI:5442270, RGD:7327160, RGD:13792537, RGD:7327160 NCBI chr 2:40,014,933...41,529,190
Ensembl chr 2:40,019,933...41,525,884
JBrowse link
G Pln phospholamban acts_upstream_of_or_within ISO MGI:2158357 (MGI:3655311|PMID:8620604) RGD PMID:8620604 MGI:3655311 NCBI chr20:32,629,537...32,639,559 JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in
acts_upstream_of_or_within
ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
MGI:2179753 (MGI:3695100|PMID:16172272)
(PMID:22529811)
BHF-UCL
Ensembl
RGD
PMID:16172272 PMID:22529811 GO_REF:0000024 GO_REF:0000107 MGI:3695100 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769
JBrowse link
G Sri sorcin involved_in ISO (PMID:12754254), (PMID:17130302) RGD PMID:12754254 PMID:17130302 NCBI chr 4:25,973,493...25,997,879
Ensembl chr 4:25,966,750...25,998,077
JBrowse link
G Stc1 stanniocalcin 1 involved_in ISO (PMID:12663264) RGD PMID:12663264 NCBI chr15:44,299,591...44,311,695
Ensembl chr15:44,299,621...44,310,264
JBrowse link
G Sumo1 small ubiquitin-like modifier 1 involved_in ISO (MGI:5292424|PMID:21900893) RGD PMID:21900893 MGI:5292424 NCBI chr 9:61,078,790...61,108,697
Ensembl chr 9:61,077,435...61,108,761
JBrowse link
regulation of cardiac muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IMP RGD PMID:20334814 RGD:2317910 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801
JBrowse link
G Adra1b adrenoceptor alpha 1B involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:28,255,025...28,373,418
Ensembl chr10:28,255,025...28,312,919
JBrowse link
G Agrn agrin involved_in ISO (MGI:4352602|PMID:19376779) RGD PMID:19376779 MGI:4352602 NCBI chr 5:166,749,306...166,782,212
Ensembl chr 5:166,749,310...166,786,003
JBrowse link
G Ank2 ankyrin 2 involved_in ISO (PMID:15178757)
(MGI:3044878|PMID:15178757)
RGD PMID:15178757 MGI:3044878 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923
JBrowse link
G Asb15 ankyrin repeat and SOCS box containing 15 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:53,021,553...53,050,846
Ensembl chr 4:53,031,692...53,049,928
JBrowse link
G Bmp10 bone morphogenetic protein 10 involved_in ISO
IEA
(PMID:17921333)
GO_REF:0000107
RGD
Ensembl
PMID:17921333 GO_REF:0000107 NCBI chr 4:119,872,066...119,877,694
Ensembl chr 4:119,872,045...119,878,627
JBrowse link
G Calm1 calmodulin 1 involved_in ISO (PMID:23040497) RGD PMID:23040497 NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227
JBrowse link
G Calm2 calmodulin 2 involved_in ISO (PMID:23040497) RGD PMID:23040497 NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287
JBrowse link
G Calm3 calmodulin 3 involved_in ISO (PMID:23040497) RGD PMID:23040497 NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207
JBrowse link
G Cav3 caveolin 3 involved_in ISO (PMID:17275750) RGD PMID:17275750 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137
JBrowse link
G Ehd3 EH-domain containing 3 involved_in IEA
ISO
GO_REF:0000107
(MGI:5770033|PMID:25825486)
Ensembl
RGD
PMID:25825486 GO_REF:0000107 MGI:5770033 NCBI chr 6:21,640,861...21,665,601
Ensembl chr 6:21,639,290...21,665,236
JBrowse link
G Gja5 gap junction protein, alpha 5 involved_in ISO (PMID:16790700), (PMID:22247482), (PMID:23348765) RGD PMID:16790700 PMID:22247482 PMID:23348765 NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952
JBrowse link
G Hcn4 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 involved_in ISO (PMID:12750403) RGD PMID:12750403 NCBI chr 8:59,222,206...59,259,626
Ensembl chr 8:59,221,653...59,259,639
JBrowse link
G Nkx2-5 NK2 homeobox 5 involved_in IEA
ISO
GO_REF:0000107
(MGI:3829107|PMID:18689573)
Ensembl
RGD
PMID:18689573 GO_REF:0000107 MGI:3829107 NCBI chr10:16,340,428...16,347,004
Ensembl chr10:16,344,159...16,346,934
JBrowse link
G P2rx4 purinergic receptor P2X 4 involved_in ISO (PMID:11606481), (PMID:15130891) RGD PMID:11606481 PMID:15130891 NCBI chr12:33,844,609...33,862,265
Ensembl chr12:33,844,396...33,862,253
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:11159936) RGD PMID:11159936 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142
JBrowse link
G Scn10a sodium voltage-gated channel alpha subunit 10 involved_in ISO (PMID:20062061) RGD PMID:20062061 NCBI chr 8:119,350,723...119,462,882
Ensembl chr 8:119,350,724...119,462,614
JBrowse link
G Smad7 SMAD family member 7 involved_in IEA
ISO
GO_REF:0000107
(MGI:3836072|PMID:18952608)
Ensembl
RGD
PMID:18952608 GO_REF:0000107 MGI:3836072 NCBI chr18:68,988,429...69,016,774
Ensembl chr18:68,988,429...69,016,765
JBrowse link
G Tnni3k TNNI3 interacting kinase involved_in ISO
ISS
(PMID:24925317)
GO_REF:0000024
RGD
BHF-UCL
PMID:24925317 GO_REF:0000024 NCBI chr 2:243,737,346...244,005,319
Ensembl chr 2:243,710,950...244,005,268
JBrowse link
regulation of cardiac muscle contraction by calcium ion signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO (PMID:12571597)
(MGI:2449848|PMID:12571597)
RGD PMID:12571597 MGI:2449848 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923
JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 involved_in IC PMID:17442282 BHF-UCL PMID:17442282 RGD:6903343 NCBI chr13:84,729,597...84,754,544
Ensembl chr13:84,729,601...84,754,544
JBrowse link
G Atp1b1 ATPase Na+/K+ transporting subunit beta 1 involved_in ISO (MGI:4359299|PMID:19683723) RGD PMID:19683723 MGI:4359299 NCBI chr13:76,786,580...76,807,096
Ensembl chr13:76,786,578...76,807,459
JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 involved_in ISO
IBA
IDA
(PMID:10587333)
PMID:21873635
PMID:9851937
RGD PMID:10587333 PMID:21873635 PMID:9851937 RGD:13792537, RGD:10047146 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101
JBrowse link
G Hdac4 histone deacetylase 4 acts_upstream_of_or_within ISO (MGI:3793386|PMID:18250163) RGD PMID:18250163 MGI:3793386 NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO (PMID:17875969) RGD PMID:17875969 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142
JBrowse link
G Slc9a1 solute carrier family 9 member A1 involved_in ISO (PMID:15105296) RGD PMID:15105296 NCBI chr 5:145,576,341...145,629,630
Ensembl chr 5:145,576,334...145,629,624
JBrowse link
G Tnni3 troponin I3, cardiac type involved_in ISO (PMID:25771144) RGD PMID:25771144 NCBI chr 1:69,299,900...69,303,582
Ensembl chr 1:69,299,900...69,303,580
JBrowse link
regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ank2 ankyrin 2 involved_in ISO UniProtKB:Q8C8R3 (PMID:17178715)
(MGI:5427070|PMID:21859974), (MGI:5430893|PMID:17178715)
RGD PMID:17178715 PMID:21859974 MGI:5427070 MGI:5430893 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
JBrowse link
G Camk2d calcium/calmodulin-dependent protein kinase II delta involved_in IC PMID:12676813 BHF-UCL PMID:12676813 RGD:10047271 NCBI chr 2:215,023,785...215,287,351
Ensembl chr 2:215,024,004...215,286,178
JBrowse link
G Casq2 calsequestrin 2 involved_in
acts_upstream_of_or_within
IEA
ISO
IMP
IBA
GO_REF:0000107
(MGI:1202079|PMID:9525981)
(MGI:3689635|PMID:16932808)
PMID:17569730
(PMID:16601229), (PMID:16908766)
PMID:21873635
Ensembl
RGD
PMID:9525981 PMID:16601229 PMID:16908766 PMID:16932808 PMID:17569730 More... GO_REF:0000107 MGI:1202079 MGI:3689635, RGD:2314601, RGD:13792537 NCBI chr 2:189,526,003...189,582,276
Ensembl chr 2:189,525,960...189,582,267
JBrowse link
G Dmd dystrophin involved_in ISO (MGI:4420848|PMID:20080623) RGD PMID:20080623 MGI:4420848 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B involved_in IBA
ISO
PMID:21873635
(MGI:3621834|PMID:12837242)
RGD PMID:12837242 PMID:21873635 MGI:3621834, RGD:13792537 NCBI chr 6:27,832,128...27,850,600
Ensembl chr 6:27,838,802...27,848,653
JBrowse link
G Pln phospholamban acts_upstream_of_or_within ISO MGI:2158357 (MGI:82999|PMID:8831698) RGD PMID:8831698 MGI:82999 NCBI chr20:32,629,537...32,639,559 JBrowse link
G Ryr2 ryanodine receptor 2 involved_in IEA
ISO
GO_REF:0000107
UniProtKB:Q9Z2I2 (MGI:3621834|PMID:12837242)
Ensembl
RGD
PMID:12837242 GO_REF:0000107 MGI:3621834 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142
JBrowse link
G Slc8a1 solute carrier family 8 member A1 involved_in IDA PMID:21779914 BHF-UCL PMID:21779914 RGD:8554732 NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628
JBrowse link
G Tmem38a transmembrane protein 38a involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1098718 (MGI:3715564|PMID:17611541)
Ensembl
RGD
PMID:17611541 GO_REF:0000107 MGI:3715564 NCBI chr16:17,258,160...17,274,204
Ensembl chr16:17,258,164...17,273,415
JBrowse link
G Tmem38b transmembrane protein 38B acts_upstream_of_or_within ISO MGI:1921416 (MGI:3715564|PMID:17611541) RGD PMID:17611541 MGI:3715564 NCBI chr 5:68,460,304...68,496,026
Ensembl chr 5:68,460,304...68,496,025
JBrowse link
regulation of excitatory postsynaptic membrane potential involved in skeletal muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bscl2 BSCL2 lipid droplet biogenesis associated, seipin acts_upstream_of_or_within ISO (MGI:5468741|PMID:23173741) RGD PMID:23173741 MGI:5468741 NCBI chr 1:205,731,814...205,743,430
Ensembl chr 1:205,733,872...205,743,421
JBrowse link
G Dmpk DM1 protein kinase acts_upstream_of_or_within ISO MGI:2182402 (MGI:3721737|PMID:11526199) RGD PMID:11526199 MGI:3721737 NCBI chr 1:78,730,255...78,740,585
Ensembl chr 1:78,730,275...78,740,593
JBrowse link
regulation of hindgut contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ghsr growth hormone secretagogue receptor IMP RGD PMID:16873401 RGD:1625276 NCBI chr 2:110,268,489...110,271,865
Ensembl chr 2:110,268,489...110,271,865
JBrowse link
regulation of muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07013776.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:239,898,492...239,898,935 JBrowse link
G Anxa6 annexin A6 involved_in
acts_upstream_of_or_within
IEA
ISO
IBA
GO_REF:0000107
(MGI:2177904|PMID:11919174)
PMID:21873635
Ensembl
RGD
PMID:11919174 PMID:21873635 GO_REF:0000107 MGI:2177904, RGD:13792537 NCBI chr10:39,101,395...39,156,483
Ensembl chr10:39,097,109...39,156,433
JBrowse link
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within ISO MGI:2451291 (MGI:1337471|PMID:10360172) RGD PMID:10360172 MGI:1337471 NCBI chr13:84,729,597...84,754,544
Ensembl chr13:84,729,601...84,754,544
JBrowse link
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 TAS RGD PMID:12403631 RGD:633528 NCBI chr 1:181,026,606...181,044,859 JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 TAS RGD PMID:11595740 RGD:70642 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101
JBrowse link
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit acts_upstream_of_or_within ISO MGI:2155602 (MGI:1336857|PMID:10318955) RGD PMID:10318955 MGI:1336857 NCBI chr 8:55,401,981...55,415,012
Ensembl chr 8:55,401,702...55,415,165
JBrowse link
G Hspb6 heat shock protein family B (small) member 6 IEP RGD PMID:8921906 RGD:633218 NCBI chr 1:85,806,898...85,809,072
Ensembl chr 1:85,806,146...85,809,071
JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 involved_in IMP PMID:22206926 UniProt PMID:22206926 RGD:10047237 NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682
JBrowse link
G Mylk2 myosin light chain kinase 2 IMP RGD PMID:16002744 RGD:1600503 NCBI chr 3:141,376,450...141,388,357
Ensembl chr 3:141,376,691...141,387,728
JBrowse link
G Prkca protein kinase C, alpha acts_upstream_of_or_within ISO MGI:3037088 (MGI:3033566|PMID:14966518) RGD PMID:14966518 MGI:3033566 NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012
JBrowse link
G Sstr2 somatostatin receptor 2 IMP RGD PMID:11897621 RGD:737668 NCBI chr10:98,664,204...98,671,370
Ensembl chr10:98,664,216...98,674,351
JBrowse link
G Tnnc1 troponin C1, slow skeletal and cardiac type involved_in ISO
IBA
(PMID:18092822)
PMID:21873635
RGD PMID:18092822 PMID:21873635 RGD:13792537 NCBI chr16:6,400,801...6,405,419
Ensembl chr16:6,402,171...6,405,634
JBrowse link
G Tnnc2 troponin C2, fast skeletal type involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:153,513,272...153,516,033
Ensembl chr 3:153,513,271...153,516,029
JBrowse link
G Tnni1 troponin I1, slow skeletal type IDA RGD PMID:16192301 RGD:1599030 NCBI chr13:47,229,217...47,241,640
Ensembl chr13:47,229,216...47,241,644
JBrowse link
G Tnni2 troponin I2, fast skeletal type IDA RGD PMID:16192301 RGD:1599030 NCBI chr 1:197,595,012...197,597,554
Ensembl chr 1:197,594,813...197,597,560
JBrowse link
G Tnni3 troponin I3, cardiac type acts_upstream_of_or_within TAS
ISO
(MGI:2653723|PMID:12551921) RGD PMID:12551921 PMID:9065755 MGI:2653723, RGD:730032 NCBI chr 1:69,299,900...69,303,582
Ensembl chr 1:69,299,900...69,303,580
JBrowse link
G Tnnt1 troponin T1, slow skeletal type IDA RGD PMID:16192301 RGD:1599030 NCBI chr 1:69,306,362...69,316,721
Ensembl chr 1:69,306,362...69,316,721
JBrowse link
G Tnnt2 troponin T2, cardiac type involved_in IDA
IEA
GO_REF:0000002 InterPro PMID:16443664 GO_REF:0000002, RGD:1580456 NCBI chr13:47,267,325...47,285,390
Ensembl chr13:47,267,204...47,285,388
JBrowse link
G Tnnt3 troponin T3, fast skeletal type IDA RGD PMID:16192301 RGD:1599030 NCBI chr 1:197,652,535...197,669,736
Ensembl chr 1:197,652,431...197,669,535
JBrowse link
regulation of muscle filament sliding term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mylk2 myosin light chain kinase 2 involved_in ISO
IEA
(PMID:16448786)
GO_REF:0000107
RGD
Ensembl
PMID:16448786 GO_REF:0000107 NCBI chr 3:141,376,450...141,388,357
Ensembl chr 3:141,376,691...141,387,728
JBrowse link
regulation of muscle filament sliding speed term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tnnc1 troponin C1, slow skeletal and cardiac type involved_in ISO (MGI:3793933|PMID:10747195) RGD PMID:10747195 MGI:3793933 NCBI chr16:6,400,801...6,405,419
Ensembl chr16:6,402,171...6,405,634
JBrowse link
G Tnnt2 troponin T2, cardiac type involved_in IMP PMID:10747195 BHF-UCL PMID:10747195 RGD:8554013 NCBI chr13:47,267,325...47,285,390
Ensembl chr13:47,267,204...47,285,388
JBrowse link
regulation of skeletal muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cav3 caveolin 3 involved_in ISO (PMID:17524427) RGD PMID:17524427 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137
JBrowse link
G Dmd dystrophin involved_in ISO (MGI:3837615|PMID:19198614) RGD PMID:19198614 MGI:3837615 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207
JBrowse link
G Grcc10 gene rich cluster, C10 gene involved_in ISO (PMID:23453665), (PMID:23633300), (PMID:24798461) RGD PMID:23453665 PMID:23633300 PMID:24798461 NCBI chr 4:157,551,276...157,552,924 JBrowse link
G Slc8a3 solute carrier family 8 member A3 involved_in ISS
ISO
GO_REF:0000024
(MGI:3027331|PMID:14722618)
UniProt
RGD
PMID:14722618 GO_REF:0000024 MGI:3027331 NCBI chr 6:100,874,359...101,007,989
Ensembl chr 6:100,874,369...101,007,508
JBrowse link
regulation of skeletal muscle contraction by action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Scn4a sodium voltage-gated channel alpha subunit 4 involved_in ISO
IEA
ISS
(PMID:12766226)
GO_REF:0000107
GO_REF:0000024
RGD
Ensembl
UniProt
PMID:12766226 GO_REF:0000024 GO_REF:0000107 NCBI chr10:91,246,936...91,296,670
Ensembl chr10:91,246,936...91,296,545
JBrowse link
regulation of skeletal muscle contraction by calcium ion signaling term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dmpk DM1 protein kinase involved_in IBA
ISO
PMID:21873635
(MGI:1097019|PMID:9294109)
RGD PMID:9294109 PMID:21873635 MGI:1097019, RGD:13792537 NCBI chr 1:78,730,255...78,740,585
Ensembl chr 1:78,730,275...78,740,593
JBrowse link
regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casq1 calsequestrin 1 involved_in
acts_upstream_of_or_within
ISS
ISO
IBA
GO_REF:0000024
(MGI:5306707|PMID:22049211)
MGI:3530841 (MGI:3814667|PMID:17627988)
PMID:21873635
UniProt
RGD
PMID:17627988 PMID:22049211 PMID:21873635 GO_REF:0000024 MGI:3814667 MGI:5306707, RGD:13792537 NCBI chr13:84,670,648...84,680,339
Ensembl chr13:84,670,649...84,680,339
JBrowse link
G Dmd dystrophin involved_in ISO (MGI:3837615|PMID:19198614) RGD PMID:19198614 MGI:3837615 NCBI chr  X:47,272,324...49,504,219
Ensembl chr  X:47,272,331...49,504,207
JBrowse link
regulation of skeletal muscle contraction via regulation of action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnj2 potassium inwardly-rectifying channel, subfamily J, member 2 involved_in ISO (PMID:11371347) RGD PMID:11371347 NCBI chr10:96,060,849...96,071,401
Ensembl chr10:96,060,821...96,071,445
JBrowse link
regulation of slow-twitch skeletal muscle fiber contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Myh7 myosin heavy chain 7 involved_in IEA
ISO
GO_REF:0000107
(PMID:7883988)
Ensembl
RGD
PMID:7883988 GO_REF:0000107 NCBI chr15:28,446,550...28,469,888
Ensembl chr15:28,446,550...28,468,217
JBrowse link
regulation of smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within ISO MGI:2451291 (MGI:3525892|PMID:14627611) RGD PMID:14627611 MGI:3525892 NCBI chr13:84,729,597...84,754,544
Ensembl chr13:84,729,601...84,754,544
JBrowse link
G Cav1 caveolin 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180364 (MGI:3695200|PMID:16782699), (MGI:3707284|PMID:17098833)
Ensembl
RGD
PMID:16782699 PMID:17098833 GO_REF:0000107 MGI:3695200 MGI:3707284 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Chrm2 cholinergic receptor, muscarinic 2 involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:12185001 PMID:21873635 RGD:724728, RGD:13792537 NCBI chr 4:65,015,408...65,149,104
Ensembl chr 4:65,014,144...65,149,103
JBrowse link
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit acts_upstream_of_or_within ISO MGI:2155602 (MGI:1336857|PMID:10318955), (MGI:3607823|PMID:10771006) RGD PMID:10318955 PMID:10771006 MGI:1336857 MGI:3607823 NCBI chr 8:55,401,981...55,415,012
Ensembl chr 8:55,401,702...55,415,165
JBrowse link
G Chrnb4 cholinergic receptor nicotinic beta 4 subunit acts_upstream_of_or_within ISO MGI:2158716 (MGI:3607823|PMID:10771006) RGD PMID:10771006 MGI:3607823 NCBI chr 8:55,418,379...55,436,967
Ensembl chr 8:55,418,313...55,437,027
JBrowse link
G Flt1 Fms related receptor tyrosine kinase 1 IDA RGD PMID:12062723 RGD:1582498 NCBI chr12:7,296,899...7,468,626
Ensembl chr12:7,297,292...7,468,626
JBrowse link
G Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 involved_in
acts_upstream_of
IEA
ISO
GO_REF:0000107
(MGI:5926671|PMID:28275141)
Ensembl
RGD
PMID:28275141 GO_REF:0000107 MGI:5926671 NCBI chr10:83,590,052...83,598,620
Ensembl chr10:83,590,071...83,598,620
JBrowse link
G P2rx1 purinergic receptor P2X 1 acts_upstream_of_or_within ISO MGI:2181608 (MGI:1351403|PMID:10638758), (MGI:3607802|PMID:11570704) RGD PMID:10638758 PMID:11570704 MGI:1351403 MGI:3607802 NCBI chr10:57,618,586...57,633,648
Ensembl chr10:57,618,586...57,633,623
JBrowse link
G Shc1 SHC adaptor protein 1 IMP RGD PMID:27270176 RGD:12792230 NCBI chr 2:174,837,937...174,849,538
Ensembl chr 2:174,837,930...174,849,536
JBrowse link
G Tnni3 troponin I3, cardiac type IMP RGD PMID:16236710 RGD:1580418 NCBI chr 1:69,299,900...69,303,582
Ensembl chr 1:69,299,900...69,303,580
JBrowse link
regulation of striated muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp1a2 ATPase Na+/K+ transporting subunit alpha 2 acts_upstream_of_or_within ISO MGI:2451291 (MGI:3577656|PMID:15253893) RGD PMID:15253893 MGI:3577656 NCBI chr13:84,729,597...84,754,544
Ensembl chr13:84,729,601...84,754,544
JBrowse link
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 involved_in ISS
ISO
GO_REF:0000024
(PMID:9405806)
UniProt
RGD
PMID:9405806 GO_REF:0000024 NCBI chr 1:181,026,606...181,044,859 JBrowse link
G Mybpc3 myosin binding protein C3 involved_in IEP PMID:8799143 BHF-UCL PMID:8799143 RGD:8553425 NCBI chr 3:77,095,165...77,113,406
Ensembl chr 3:77,095,252...77,113,405
JBrowse link
G Myl3 myosin light chain 3 involved_in ISO (PMID:16675844) RGD PMID:16675844 NCBI chr 8:110,738,669...110,744,814
Ensembl chr 8:110,738,661...110,744,816
JBrowse link
G Tnnt3 troponin T3, fast skeletal type involved_in IMP
IEA
ISO
GO_REF:0000107
(PMID:17194691)
GO_REF:0000002
Ensembl
RGD
InterPro
PMID:17194691 PMID:16839517 GO_REF:0000002 GO_REF:0000107, RGD:1599483 NCBI chr 1:197,652,535...197,669,736
Ensembl chr 1:197,652,431...197,669,535
JBrowse link
regulation of the force of skeletal muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn3 actinin alpha 3 involved_in ISO (MGI:3759354|PMID:17828264) RGD PMID:17828264 MGI:3759354 NCBI chr 1:202,159,081...202,175,012
Ensembl chr 1:202,159,082...202,175,012
JBrowse link
G Kbtbd13 kelch repeat and BTB domain containing 13 acts_upstream_of_or_within ISO MGI:6469320 (MGI:6460519|PMID:31671076)
(PMID:31671076)
RGD PMID:31671076 MGI:6460519 NCBI chr 8:65,909,821...65,911,558 JBrowse link
G Myh7 myosin heavy chain 7 involved_in IEA
ISO
GO_REF:0000107
(PMID:7883988)
Ensembl
RGD
PMID:7883988 GO_REF:0000107 NCBI chr15:28,446,550...28,469,888
Ensembl chr15:28,446,550...28,468,217
JBrowse link
regulation of uterine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Setd3 SET domain containing 3, actin histidine methyltransferase involved_in ISS
ISO
GO_REF:0000024
(MGI:6276231|PMID:30626964)
UniProt
RGD
PMID:30626964 GO_REF:0000024 MGI:6276231 NCBI chr 6:127,023,058...127,090,020
Ensembl chr 6:127,023,058...127,090,008
JBrowse link
G Tacr1 tachykinin receptor 1 involved_in ISO (MGI:5619483|PMID:15647454) RGD PMID:15647454 MGI:5619483 NCBI chr 4:114,920,844...115,089,733
Ensembl chr 4:114,920,844...115,089,733
JBrowse link
G Tacr2 tachykinin receptor 2 involved_in ISO (MGI:5619483|PMID:15647454) RGD PMID:15647454 MGI:5619483 NCBI chr20:30,208,907...30,223,446
Ensembl chr20:30,208,907...30,223,446
JBrowse link
regulation of vascular associated smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adra2b adrenoceptor alpha 2B IMP RGD PMID:18054907 RGD:2313547 NCBI chr 3:114,585,174...114,589,220
Ensembl chr 3:114,585,169...114,589,355
JBrowse link
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 involved_in ISS
ISO
GO_REF:0000024
(MGI:6282934|PMID:24805951)
UniProt
RGD
PMID:24805951 GO_REF:0000024 MGI:6282934 NCBI chr 7:33,735,595...33,845,226
Ensembl chr 7:33,735,871...33,843,295
JBrowse link
G Chrm3 cholinergic receptor, muscarinic 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:60,005,137...60,467,250
Ensembl chr17:60,005,202...60,467,278
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 IMP inhibition decreases both calcium-stimulated and unstimulated myogenic tone in middle cerebral arteries (p<0.001) RGD PMID:10198244 RGD:2293329 NCBI chr 8:64,683,449...64,754,900
Ensembl chr 8:64,683,449...64,755,147
JBrowse link
G P2rx1 purinergic receptor P2X 1 acts_upstream_of_or_within ISO MGI:2181608 (MGI:3694186|PMID:16920810) RGD PMID:16920810 MGI:3694186 NCBI chr10:57,618,586...57,633,648
Ensembl chr10:57,618,586...57,633,623
JBrowse link
G Zdhhc21 zinc finger DHHC-type palmitoyltransferase 21 involved_in ISO (MGI:5921050|PMID:26715683) RGD PMID:26715683 MGI:5921050 NCBI chr 5:97,227,621...97,286,866
Ensembl chr 5:97,229,345...97,286,537
JBrowse link
regulation of vein smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adrb2 adrenoceptor beta 2 enables IDA salbutamol, isoproterenol, clenbuterol, norepinephrine RGD PMID:6289140 RGD:2301944 NCBI chr18:55,642,459...55,644,501
Ensembl chr18:55,502,903...55,644,512
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 IMP RGD PMID:31125290 RGD:14696717 NCBI chr 1:233,636,442...233,761,063
Ensembl chr 1:233,636,452...233,760,626
JBrowse link
regulation of ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034767.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Cacna1c calcium voltage-gated channel subunit alpha1 C involved_in ISS
IEA
ISO
GO_REF:0000024
GO_REF:0000107
(PMID:15454078), (PMID:26253506)
BHF-UCL
Ensembl
RGD
PMID:15454078 PMID:26253506 GO_REF:0000024 GO_REF:0000107 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
JBrowse link
G Cav1 caveolin 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5607357|PMID:25017399)
Ensembl
RGD
PMID:25017399 GO_REF:0000107 MGI:5607357 NCBI chr 4:45,640,624...45,673,708
Ensembl chr 4:45,634,918...45,673,705
JBrowse link
G Ctnna3 catenin alpha 3 involved_in ISO (PMID:23136403) RGD PMID:23136403 NCBI chr20:23,614,469...25,200,026 JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 involved_in IEA
ISO
GO_REF:0000107
(MGI:5816439|PMID:25447080)
Ensembl
RGD
PMID:25447080 GO_REF:0000107 MGI:5816439 NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689
JBrowse link
G Dsc2 desmocollin 2 involved_in ISO (PMID:23863954) RGD PMID:23863954 NCBI chr18:11,450,392...11,482,476
Ensembl chr18:11,450,390...11,482,392
JBrowse link
G Dsg2 desmoglein 2 involved_in ISO (PMID:16505173), (PMID:23381804) RGD PMID:16505173 PMID:23381804 NCBI chr18:11,846,207...11,904,630
Ensembl chr18:11,846,183...11,904,156
JBrowse link
G Dsp desmoplakin involved_in ISO (PMID:12373648) RGD PMID:12373648 NCBI chr17:26,623,602...26,671,692
Ensembl chr17:26,623,588...26,671,800
JBrowse link
G Jup junction plakoglobin involved_in ISO (PMID:17924338) RGD PMID:17924338 NCBI chr10:85,300,438...85,327,378
Ensembl chr10:85,300,440...85,327,057
JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:22889254) RGD PMID:22889254 NCBI chr11:84,661,783...84,727,730 JBrowse link
G Ryr2 ryanodine receptor 2 involved_in ISO
IEA
(PMID:17875969)
GO_REF:0000107
RGD
Ensembl
PMID:17875969 GO_REF:0000107 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142
JBrowse link
G Trpm4 transient receptor potential cation channel, subfamily M, member 4 involved_in IEA
ISO
GO_REF:0000107
(PMID:27207958)
Ensembl
RGD
PMID:27207958 GO_REF:0000107 NCBI chr 1:95,781,805...95,812,095
Ensembl chr 1:95,782,000...95,812,532
JBrowse link
relaxation of vascular associated smooth muscle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adora1 adenosine A1 receptor IMP RGD PMID:19443947 RGD:2317917 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801
JBrowse link
G Adora2b adenosine A2B receptor involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3773754 (MGI:3794903|PMID:18340377)
Ensembl
RGD
PMID:18340377 GO_REF:0000107 MGI:3794903 NCBI chr10:46,940,394...46,956,772
Ensembl chr10:46,940,384...46,956,772
JBrowse link
G Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3640802 (MGI:3640061|PMID:16614755)
Ensembl
RGD
PMID:16614755 GO_REF:0000107 MGI:3640061 NCBI chr 2:167,418,615...167,482,293
Ensembl chr 2:167,418,640...167,481,671
JBrowse link
G Irag1 inositol 1,4,5-triphosphate receptor associated 1 acts_upstream_of_or_within ISO MGI:3525059 (MGI:3512693|PMID:15483626) RGD PMID:15483626 MGI:3512693 NCBI chr 1:164,981,716...165,094,232
Ensembl chr 1:164,981,716...165,094,176
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:3050114 (MGI:3695011|PMID:15867178)
(PMID:25139746)
RGD PMID:15867178 PMID:25139746 PMID:21873635 MGI:3695011, RGD:13792537 NCBI chr15:302,078...1,001,198
Ensembl chr15:302,214...1,001,198
JBrowse link
G Prkg1 protein kinase cGMP-dependent 1 acts_upstream_of_or_within ISO MGI:2181586 (MGI:3512693|PMID:15483626) RGD PMID:15483626 MGI:3512693 NCBI chr 1:228,409,883...229,638,794 JBrowse link
G Rgs2 regulator of G-protein signaling 2 involved_in ISO (MGI:2682081|PMID:14608379) RGD PMID:14608379 MGI:2682081 NCBI chr13:55,799,749...55,802,354
Ensembl chr13:55,798,829...55,802,385
JBrowse link
G Sod1 superoxide dismutase 1 involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
MGI:1857873 (MGI:2682495|PMID:14679182), (MGI:3625573|PMID:12433839)
UniProt
RGD
PMID:12433839 PMID:14679182 GO_REF:0000024 MGI:2682495 MGI:3625573 NCBI chr11:29,456,673...29,462,249
Ensembl chr11:29,456,558...29,462,249
JBrowse link
G Trpv4 transient receptor potential cation channel, subfamily V, member 4 involved_in ISO (PMID:25139746) RGD PMID:25139746 NCBI chr12:41,938,533...41,977,517
Ensembl chr12:41,938,560...41,977,517
JBrowse link
skeletal muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07013776.1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 Ensembl chr 2:239,898,492...239,898,935 JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 IEP RGD PMID:21993782 RGD:13782070 NCBI chr12:34,072,710...34,122,142
Ensembl chr12:34,072,683...34,122,101
JBrowse link
G Ccdc78 coiled-coil domain containing 78 involved_in ISO (PMID:22818856) RGD PMID:22818856 NCBI chr10:14,808,355...14,812,284
Ensembl chr10:14,807,710...14,812,282
JBrowse link
G Chrna1 cholinergic receptor nicotinic alpha 1 subunit involved_in IDA
ISO
(PMID:8872460) RGD PMID:8872460 PMID:22461452 RGD:8549758 NCBI chr 3:58,454,763...58,469,832
Ensembl chr 3:58,454,744...58,469,840
JBrowse link
G Chrnb1 cholinergic receptor nicotinic beta 1 subunit IDA RGD PMID:22461452 RGD:8549758 NCBI chr10:54,501,096...54,516,418
Ensembl chr10:54,501,093...54,516,345
JBrowse link
G Chrnd cholinergic receptor nicotinic delta subunit IDA RGD PMID:22461452 RGD:8549758 NCBI chr 9:87,862,417...87,870,833
Ensembl chr 9:87,862,407...87,870,833
JBrowse link
G Chrne cholinergic receptor nicotinic epsilon subunit IDA RGD PMID:22461452 RGD:8549758 NCBI chr10:55,331,211...55,339,923
Ensembl chr10:55,331,212...55,335,530
JBrowse link
G Chrng cholinergic receptor nicotinic gamma subunit IDA RGD PMID:22461452 RGD:8549758 NCBI chr 9:87,878,085...87,884,193 JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex IEP RGD PMID:15888549 RGD:2298664 NCBI chr 1:242,959,539...242,995,066
Ensembl chr 1:242,959,760...242,995,065
JBrowse link
G Eef2 eukaryotic translation elongation factor 2 IEP RGD PMID:19188248 RGD:10401231 NCBI chr 7:8,533,248...8,538,518
Ensembl chr 7:8,533,116...8,559,183
JBrowse link
G Homer1 homer scaffold protein 1 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3526529 (MGI:3784629|PMID:18268005)
Ensembl
RGD
PMID:18268005 GO_REF:0000107 MGI:3784629 NCBI chr 2:24,542,777...24,645,715
Ensembl chr 2:24,543,093...24,644,785
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 IEP functional overload RGD PMID:20851858 RGD:5686398 NCBI chr 6:129,702,376...129,707,907
Ensembl chr 6:129,702,383...129,707,268
JBrowse link
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta IEP RGD PMID:15888549 RGD:2298664 NCBI chr16:69,319,487...69,373,251
Ensembl chr16:69,319,554...69,373,250
JBrowse link
G Jsrp1 junctional sarcoplasmic reticulum protein 1 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 7:8,889,486...8,906,055
Ensembl chr 7:8,901,609...8,906,055
JBrowse link
G Myh14 myosin heavy chain 14 involved_in ISO (PMID:21480433) RGD PMID:21480433 NCBI chr 1:95,096,266...95,158,861
Ensembl chr 1:95,096,266...95,158,836
JBrowse link
G Myh3 myosin heavy chain 3 involved_in ISO
IEA
(PMID:16642020)
GO_REF:0000107
RGD
Ensembl
PMID:16642020 GO_REF:0000107 NCBI chr10:51,770,177...51,793,994
Ensembl chr10:51,770,177...51,793,992
JBrowse link
G Myh7 myosin heavy chain 7 involved_in ISO
IEA
(PMID:7883988)
GO_REF:0000107
RGD
Ensembl
PMID:7883988 GO_REF:0000107 NCBI chr15:28,446,550...28,469,888
Ensembl chr15:28,446,550...28,468,217
JBrowse link
G Myh8 myosin heavy chain 8 involved_in ISO
IEA
(PMID:17041932)
GO_REF:0000107
RGD
Ensembl
PMID:17041932 GO_REF:0000107 NCBI chr10:51,963,510...51,993,103
Ensembl chr10:51,963,510...51,993,232
JBrowse link
G Rcsd1 RCSD domain containing 1 involved_in IEP
IBA
PMID:15850461
PMID:21873635
BHF-UCL
GO_Central
PMID:15850461 PMID:21873635 RGD:8693359, RGD:13792537 NCBI chr13:77,901,898...77,964,336
Ensembl chr13:77,901,898...77,966,228
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase B1 IEP RGD PMID:15033970 RGD:1643024 NCBI chr10:71,323,777...71,367,908
Ensembl chr10:71,323,777...71,367,908
JBrowse link
G Stac SH3 and cysteine rich domain involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:111,530,800...111,653,228
Ensembl chr 8:111,530,800...111,654,008
JBrowse link
G Stac2 SH3 and cysteine rich domain 2 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr10:83,032,417...83,048,260
Ensembl chr10:83,032,417...83,048,260
JBrowse link
G Stac3 SH3 and cysteine rich domain 3 involved_in IBA
ISO
PMID:21873635
(PMID:23736855)
RGD PMID:23736855 PMID:21873635 RGD:13792537 NCBI chr 7:63,343,078...63,350,590
Ensembl chr 7:63,343,186...63,350,589
JBrowse link
G Tcap titin-cap involved_in ISO
IBA
(PMID:9817758)
PMID:21873635
RGD PMID:9817758 PMID:21873635 RGD:13792537 NCBI chr10:83,381,719...83,382,887
Ensembl chr10:83,381,719...83,382,887
JBrowse link
G Tlr4 toll-like receptor 4 IEP RGD PMID:20007518 RGD:4144081 NCBI chr 5:80,145,867...80,159,501
Ensembl chr 5:80,145,826...80,159,628
JBrowse link
G Tnf tumor necrosis factor IEP RGD PMID:20007518 RGD:4144081 NCBI chr20:3,622,011...3,624,629
Ensembl chr20:3,622,011...3,624,629
JBrowse link
G Tnnc1 troponin C1, slow skeletal and cardiac type involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:6,400,801...6,405,419
Ensembl chr16:6,402,171...6,405,634
JBrowse link
G Tnnc2 troponin C2, fast skeletal type involved_in ISO
IBA
(PMID:17194691)
PMID:21873635
RGD PMID:17194691 PMID:21873635 RGD:13792537 NCBI chr 3:153,513,272...153,516,033
Ensembl chr 3:153,513,271...153,516,029
JBrowse link
G Tnni1 troponin I1, slow skeletal type involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr13:47,229,217...47,241,640
Ensembl chr13:47,229,216...47,241,644
JBrowse link
G Tnni2 troponin I2, fast skeletal type involved_in IBA
ISO
PMID:21873635
(PMID:17194691)
RGD PMID:17194691 PMID:21873635 RGD:13792537 NCBI chr 1:197,595,012...197,597,554
Ensembl chr 1:197,594,813...197,597,560
JBrowse link
G Tnni3 troponin I3, cardiac type involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:69,299,900...69,303,582
Ensembl chr 1:69,299,900...69,303,580
JBrowse link
G Tnnt1 troponin T1, slow skeletal type involved_in ISO (PMID:10952871) RGD PMID:10952871 NCBI chr 1:69,306,362...69,316,721
Ensembl chr 1:69,306,362...69,316,721
JBrowse link
G Tnnt3 troponin T3, fast skeletal type involved_in ISO
IEA
IBA
(PMID:17194691)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:17194691 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 1:197,652,535...197,669,736
Ensembl chr 1:197,652,431...197,669,535
JBrowse link
slow-twitch skeletal muscle fiber contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mb myoglobin IEP RGD PMID:15981298 RGD:1582404 NCBI chr 7:108,759,903...108,767,134
Ensembl chr 7:108,759,904...108,767,383
JBrowse link
G Tnnt1 troponin T1, slow skeletal type involved_in IDA
IBA
PMID:21873635 RGD
GO_Central
PMID:15788488 PMID:21873635 RGD:1599482, RGD:13792537 NCBI chr 1:69,306,362...69,316,721
Ensembl chr 1:69,306,362...69,316,721
JBrowse link
smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apbb1 amyloid beta precursor protein binding family B member 1 involved_in ISO
ISS
(MGI:5648704|PMID:25757569)
GO_REF:0000024
RGD
UniProt
PMID:25757569 GO_REF:0000024 MGI:5648704 NCBI chr 1:159,896,889...159,920,505
Ensembl chr 1:159,896,880...159,920,627
JBrowse link
G Apbb2 amyloid beta precursor protein binding family B member 2 involved_in ISO (MGI:5648704|PMID:25757569) RGD PMID:25757569 MGI:5648704 NCBI chr14:41,557,918...41,878,622 JBrowse link
G Avp arginine vasopressin TAS RGD PMID:7624319 RGD:61542 NCBI chr 3:117,793,447...117,805,091
Ensembl chr 3:117,793,457...117,795,425
JBrowse link
G Bdkrb2 bradykinin receptor B2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:124,472,317...124,502,497
Ensembl chr 6:124,472,566...124,502,497
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C acts_upstream_of_or_within ISO MGI:2389040|MGI:2674119 (MGI:3653822|PMID:16636102) RGD PMID:16636102 MGI:3653822 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
JBrowse link
G Chrm3 cholinergic receptor, muscarinic 3 acts_upstream_of_or_within ISO MGI:1888740 (MGI:1888655|PMID:10944224) RGD PMID:10944224 MGI:1888655 NCBI chr17:60,005,137...60,467,250
Ensembl chr17:60,005,202...60,467,278
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit acts_upstream_of_or_within ISO MGI:87892 (MGI:2156010|PMID:10531434) RGD PMID:10531434 MGI:2156010 NCBI chr 2:175,181,402...175,189,619
Ensembl chr 2:175,181,402...175,189,619
JBrowse link
G Chrnb4 cholinergic receptor nicotinic beta 4 subunit acts_upstream_of_or_within ISO MGI:87891 (MGI:2156010|PMID:10531434) RGD PMID:10531434 MGI:2156010 NCBI chr 8:55,418,379...55,436,967
Ensembl chr 8:55,418,313...55,437,027
JBrowse link
G Fkbp1b FKBP prolyl isomerase 1B acts_upstream_of_or_within ISO MGI:2182644 (MGI:3028710|PMID:14592808) RGD PMID:14592808 MGI:3028710 NCBI chr 6:27,832,128...27,850,600
Ensembl chr 6:27,838,802...27,848,653
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 1:233,636,442...233,761,063
Ensembl chr 1:233,636,452...233,760,626
JBrowse link
G Myh11 myosin heavy chain 11 acts_upstream_of_or_within ISO MGI:2656492|MGI:3576856 (MGI:2655877|PMID:10854329), (MGI:3576700|PMID:11715025), (MGI:3615070|PMID:12562924) RGD PMID:10854329 PMID:11715025 PMID:12562924 MGI:2655877 MGI:3576700 MGI:3615070 NCBI chr10:743,364...838,459
Ensembl chr10:743,685...838,459
JBrowse link
G Mylk myosin light chain kinase involved_in ISO (MGI:3820013|PMID:18586037) RGD PMID:18586037 MGI:3820013 NCBI chr11:65,783,008...66,030,239
Ensembl chr11:65,783,008...66,030,261
JBrowse link
G Nmur1 neuromedin U receptor 1 involved_in IEA
ISO
GO_REF:0000107
(PMID:10899166)
Ensembl
RGD
PMID:10899166 GO_REF:0000107 NCBI chr 9:87,033,231...87,038,070
Ensembl chr 9:87,033,279...87,036,684
JBrowse link
G Pde4b phosphodiesterase 4B NOT|acts_upstream_of_or_within ISO MGI:2181444 (MGI:2677650|PMID:14519662) RGD PMID:14519662 MGI:2677650 NCBI chr 5:116,799,827...117,367,707
Ensembl chr 5:116,799,971...117,367,696
JBrowse link
G Pde4d phosphodiesterase 4D acts_upstream_of_or_within ISO MGI:2451168 (MGI:2677650|PMID:14519662) RGD PMID:14519662 MGI:2677650 NCBI chr 2:40,014,933...41,529,190
Ensembl chr 2:40,019,933...41,525,884
JBrowse link
G Rock2 Rho-associated coiled-coil containing protein kinase 2 involved_in IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr 6:39,679,116...39,774,033
Ensembl chr 6:39,679,082...39,774,031
JBrowse link
G Tpcn2 two pore segment channel 2 involved_in ISO (MGI:4838733|PMID:20547763) RGD PMID:20547763 MGI:4838733 NCBI chr 1:200,416,538...200,446,252
Ensembl chr 1:200,416,540...200,446,236
JBrowse link
smooth muscle contraction involved in micturition term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C acts_upstream_of_or_within ISO MGI:2674119 (MGI:3699638|PMID:15132976) RGD PMID:15132976 MGI:3699638 NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
JBrowse link
G Kcnma1 potassium calcium-activated channel subfamily M alpha 1 involved_in
acts_upstream_of_or_within
ISO
IEA
(PMID:11641143)
GO_REF:0000107
MGI:3053849 (MGI:3612609|PMID:15827347)
RGD
Ensembl
PMID:11641143 PMID:15827347 GO_REF:0000107 MGI:3612609 NCBI chr15:302,078...1,001,198
Ensembl chr15:302,214...1,001,198
JBrowse link
G Tacr1 tachykinin receptor 1 IMP RGD PMID:18945947 RGD:2304258 NCBI chr 4:114,920,844...115,089,733
Ensembl chr 4:114,920,844...115,089,733
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 acts_upstream_of_or_within ISO MGI:1934023 (MGI:2385968|PMID:12161756) RGD PMID:12161756 MGI:2385968 NCBI chr10:57,851,428...57,876,513
Ensembl chr10:57,851,428...57,876,513
JBrowse link
smooth muscle relaxation of the bladder outlet term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdkrb1 bradykinin receptor B1 involved_in ISO (PMID:23846981) RGD PMID:23846981 NCBI chr 6:124,510,827...124,514,475
Ensembl chr 6:124,510,870...124,513,747
JBrowse link
G Pgr progesterone receptor involved_in ISO (PMID:24296318) RGD PMID:24296318 NCBI chr 8:6,073,216...6,131,552
Ensembl chr 8:6,072,673...6,131,344
JBrowse link
striated muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aldoa aldolase, fructose-bisphosphate A involved_in ISO (PMID:14615364) RGD PMID:14615364 NCBI chr 1:181,402,275...181,407,476
Ensembl chr 1:181,402,275...181,406,182
JBrowse link
G Arg2 arginase 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
(MGI:3621611|PMID:16537391)
Ensembl
RGD
PMID:16537391 GO_REF:0000107 MGI:3621611 NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378
JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S acts_upstream_of_or_within ISO MGI:1856326 (MGI:51975|PMID:1281468) RGD PMID:1281468 MGI:51975 NCBI chr13:47,493,949...47,564,194
Ensembl chr13:47,493,949...47,564,318
JBrowse link
G Gaa alpha glucosidase acts_upstream_of_or_within ISO MGI:2179961 (MGI:3614245|PMID:15674828), (MGI:3664400|PMID:12115977) RGD PMID:12115977 PMID:15674828 MGI:3614245 MGI:3664400 NCBI chr10:104,529,673...104,546,836
Ensembl chr10:104,529,747...104,546,836
JBrowse link
G Lmod3 leiomodin 3 involved_in ISO (PMID:25250574) RGD PMID:25250574 NCBI chr 4:129,843,964...129,858,684
Ensembl chr 4:129,843,970...129,858,244
JBrowse link
G Myh1 myosin heavy chain 1 TAS RGD PMID:8227143 RGD:1302818 NCBI chr10:51,885,913...51,909,699 JBrowse link
G Myh6 myosin heavy chain 6 involved_in
acts_upstream_of_or_within
ISO (PMID:15621050)
MGI:2182704|MGI:3652543|MGI:3664197|MGI:3690299|MGI:3690300 (MGI:1202509|PMID:9541509), (MGI:1327483|PMID:9884344), (MGI:1332374|PMID:10074482), (MGI:1333559|PMID:10066683), (MGI:3526615|PMID:15001446), (MGI:3664144|PMID:9045856), (MGI:3689292|PMID:16983074), (MGI:80448|PMID:8614836), (MGI:83539|PMID:8878443)
RGD PMID:8614836 PMID:8878443 PMID:9045856 PMID:9541509 PMID:9884344 More... MGI:1202509 MGI:1327483 MGI:1332374 MGI:1333559 MGI:3526615 MGI:3664144 MGI:3689292 MGI:80448 MGI:83539 NCBI chr15:28,418,120...28,442,316
Ensembl chr15:28,417,616...28,441,720
JBrowse link
G Myh7 myosin heavy chain 7 involved_in ISO (PMID:15621050) RGD PMID:15621050 NCBI chr15:28,446,550...28,469,888
Ensembl chr15:28,446,550...28,468,217
JBrowse link
G Mylk2 myosin light chain kinase 2 involved_in ISO
IEA
IBA
(PMID:16448786)
GO_REF:0000107
PMID:21873635
RGD
Ensembl
PMID:16448786 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 3:141,376,450...141,388,357
Ensembl chr 3:141,376,691...141,387,728
JBrowse link
G Nos1 nitric oxide synthase 1 acts_upstream_of_or_within ISO MGI:1857227 (MGI:3621611|PMID:16537391) RGD PMID:16537391 MGI:3621611 NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945
JBrowse link
G Pgam2 phosphoglycerate mutase 2 involved_in ISO (PMID:6262916) RGD PMID:6262916 NCBI chr14:80,681,796...80,683,907
Ensembl chr14:80,681,776...80,683,940
JBrowse link
G Ryr3 ryanodine receptor 3 acts_upstream_of_or_within ISO MGI:2181794 (MGI:1194690|PMID:9384575) RGD PMID:9384575 MGI:1194690 NCBI chr 3:99,431,755...99,979,125
Ensembl chr 3:99,432,505...99,704,961
JBrowse link
G Tnni3 troponin I3, cardiac type acts_upstream_of_or_within ISO (MGI:1351572|PMID:10642551), (MGI:2135742|PMID:11356618) RGD PMID:10642551 PMID:11356618 MGI:1351572 MGI:2135742 NCBI chr 1:69,299,900...69,303,582
Ensembl chr 1:69,299,900...69,303,580
JBrowse link
tonic smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mylk myosin light chain kinase involved_in IBA
ISO
PMID:21873635
(MGI:4452414|PMID:20018858)
RGD PMID:20018858 PMID:21873635 MGI:4452414, RGD:13792537 NCBI chr11:65,783,008...66,030,239
Ensembl chr11:65,783,008...66,030,261
JBrowse link
ureteric peristalsis term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tbx2 T-box transcription factor 2 acts_upstream_of_or_within ISO MGI:98495 (MGI:6284231|PMID:30478225) RGD PMID:30478225 MGI:6284231 NCBI chr10:70,679,670...70,688,868
Ensembl chr10:70,679,518...70,688,529
JBrowse link
G Tbx3 T-box transcription factor 3 acts_upstream_of_or_within ISO MGI:98494 (MGI:6284231|PMID:30478225) RGD PMID:30478225 MGI:6284231 NCBI chr12:36,879,924...36,894,849
Ensembl chr12:36,881,445...36,893,708
JBrowse link
G Tshz3 teashirt zinc finger homeobox 3 involved_in ISO (MGI:3806378|PMID:18776146) RGD PMID:18776146 MGI:3806378 NCBI chr 1:89,386,732...89,460,719
Ensembl chr 1:89,381,858...89,460,874
JBrowse link
urinary bladder smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 involved_in ISS
ISO
GO_REF:0000024
(MGI:3703409|PMID:16956963)
UniProt
RGD
PMID:16956963 GO_REF:0000024 MGI:3703409 NCBI chr13:45,156,137...45,255,292
Ensembl chr13:45,156,146...45,255,246
JBrowse link
G Bdkrb2 bradykinin receptor B2 involved_in ISO (PMID:23846981) RGD PMID:23846981 NCBI chr 6:124,472,317...124,502,497
Ensembl chr 6:124,472,566...124,502,497
JBrowse link
G Htr2a 5-hydroxytryptamine receptor 2A IMP RGD PMID:23274492 RGD:7257664 NCBI chr15:49,950,035...50,022,188
Ensembl chr15:49,950,804...50,020,928
JBrowse link
G Htr7 5-hydroxytryptamine receptor 7 IMP RGD PMID:20969855 RGD:6480667 NCBI chr 1:233,636,442...233,761,063
Ensembl chr 1:233,636,452...233,760,626
JBrowse link
G P2rx2 purinergic receptor P2X 2 involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:1097160|MGI:2687349 (MGI:3656422|PMID:15961431)
Ensembl
RGD
PMID:15961431 GO_REF:0000107 MGI:3656422 NCBI chr12:46,338,979...46,342,891
Ensembl chr12:46,339,549...46,342,891
JBrowse link
G P2rx3 purinergic receptor P2X 3 acts_upstream_of_or_within ISO MGI:1934019|MGI:2665170 (MGI:1926735|PMID:11069181), (MGI:3656422|PMID:15961431) RGD PMID:11069181 PMID:15961431 MGI:1926735 MGI:3656422 NCBI chr 3:70,080,850...70,124,664
Ensembl chr 3:70,080,851...70,125,178
JBrowse link
G Pla2g6 phospholipase A2 group VI IMP RGD PMID:12750876 RGD:6482755 NCBI chr 7:110,851,378...110,891,557
Ensembl chr 7:110,851,378...110,891,114
JBrowse link
G Ptger3 prostaglandin E receptor 3 IMP RGD PMID:18562635 RGD:10043314 NCBI chr 2:246,606,131...246,750,970
Ensembl chr 2:246,606,183...246,684,434
JBrowse link
G Trpa1 transient receptor potential cation channel, subfamily A, member 1 IMP RGD PMID:21367919 RGD:10043365 NCBI chr 5:4,379,999...4,433,243
Ensembl chr 5:4,379,999...4,433,570
JBrowse link
G Trpv1 transient receptor potential cation channel, subfamily V, member 1 acts_upstream_of_or_within ISO MGI:1934023 (MGI:2385968|PMID:12161756) RGD PMID:12161756 MGI:2385968 NCBI chr10:57,851,428...57,876,513
Ensembl chr10:57,851,428...57,876,513
JBrowse link
uterine smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen IDA RGD PMID:21401609 RGD:5129172 NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977
JBrowse link
vascular associated smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta2 actin alpha 2, smooth muscle involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:3665248 (MGI:3665239|PMID:11053242)
Ensembl
RGD
PMID:11053242 GO_REF:0000107 MGI:3665239 NCBI chr 1:231,746,527...231,759,307
Ensembl chr 1:231,746,548...231,759,554
JBrowse link
G Actg2 actin gamma 2, smooth muscle involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:116,021,832...116,046,475
Ensembl chr 4:116,021,832...116,046,465
JBrowse link
G Comp cartilage oligomeric matrix protein involved_in
acts_upstream_of_or_within
IEA
ISO
GO_REF:0000107
MGI:2180787 (MGI:5824640|PMID:27498005)
Ensembl
RGD
PMID:27498005 GO_REF:0000107 MGI:5824640 NCBI chr16:19,047,206...19,055,584
Ensembl chr16:19,047,207...19,055,845
JBrowse link
G Rap1gds1 Rap1 GTPase-GDP dissociation stimulator 1 IMP RGD PMID:18348285 RGD:2314690 NCBI chr 2:227,500,366...227,645,243
Ensembl chr 2:227,500,367...227,645,169
JBrowse link
G Slc8a1 solute carrier family 8 member A1 involved_in ISO (MGI:1927695|PMID:10967099) RGD PMID:10967099 MGI:1927695 NCBI chr 6:13,194,609...13,547,369
Ensembl chr 6:13,194,662...13,535,628
JBrowse link
vein smooth muscle contraction term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Edn1 endothelin 1 involved_in ISO
IBA
(PMID:9422810)
PMID:21873635
RGD PMID:9422810 PMID:21873635 RGD:13792537 NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
JBrowse link
G Edn2 endothelin 2 involved_in ISO
IBA
IEA
(PMID:8982507), (PMID:9422810)
PMID:21873635
GO_REF:0000107
RGD
Ensembl
PMID:8982507 PMID:9422810 PMID:21873635 GO_REF:0000107, RGD:13792537 NCBI chr 5:133,751,316...133,756,814
Ensembl chr 5:133,751,217...133,756,814
JBrowse link
G Edn3 endothelin 3 involved_in ISO
IBA
(PMID:8982507)
PMID:21873635
RGD PMID:8982507 PMID:21873635 RGD:13792537 NCBI chr 3:163,562,307...163,586,636
Ensembl chr 3:163,562,520...163,585,093
JBrowse link
G Ednrb endothelin receptor type B involved_in ISO (PMID:8982507) RGD PMID:8982507 NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115
JBrowse link
ventricular cardiac muscle cell action potential term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G AABR07034767.1 involved_in IEA GO_REF:0000107 Ensembl GO_REF:0000107
G Ank2 ankyrin 2 involved_in ISO (PMID:17242276) RGD PMID:17242276 NCBI chr 2:215,378,028...215,954,015
Ensembl chr 2:215,379,680...215,862,923
JBrowse link
G Cav3 caveolin 3 involved_in IMP PMID:22879586 BHF-UCL PMID:22879586 RGD:8553349 NCBI chr 4:145,582,168...145,598,142
Ensembl chr 4:145,582,060...145,598,137
JBrowse link
G Gja5 gap junction protein, alpha 5 acts_upstream_of_or_within ISO MGI:2445238 (MGI:1197846|PMID:9501070) RGD PMID:9501070 MGI:1197846 NCBI chr 2:184,602,407...184,621,952
Ensembl chr 2:184,564,475...184,621,952
JBrowse link
G Gpd1l glycerol-3-phosphate dehydrogenase 1-like involved_in ISO (PMID:17967977), (PMID:19666841) RGD PMID:17967977 PMID:19666841 NCBI chr 8:114,591,103...114,620,771
Ensembl chr 8:114,588,487...114,620,723
JBrowse link
G Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 involved_in ISO
IBA
(PMID:9354802)
PMID:21873635
RGD PMID:9354802 PMID:21873635 RGD:13792537 NCBI chr11:31,580,951...31,594,116
Ensembl chr11:31,580,742...31,593,901
JBrowse link
G Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 involved_in
acts_upstream_of_or_within
ISO
IBA
(PMID:10219239)
MGI:3699589 (MGI:3813163|PMID:18603586)
PMID:21873635
RGD PMID:10219239 PMID:18603586 PMID:21873635 MGI:3813163, RGD:13792537 NCBI chr11:31,517,176...31,530,026
Ensembl chr11:31,295,614...31,530,043
JBrowse link
G Kcne3 potassium voltage-gated channel subfamily E regulatory subunit 3 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:154,523,903...154,530,865
Ensembl chr 1:154,523,830...154,532,020
JBrowse link
G Kcne4 potassium voltage-gated channel subfamily E regulatory subunit 4 involved_in IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:80,243,429...80,251,533
Ensembl chr 9:80,247,379...80,250,979
JBrowse link
G Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 involved_in ISO
IBA
(PMID:21493962)
PMID:21873635
RGD PMID:21493962 PMID:21873635 RGD:13792537 NCBI chr  X:105,930,398...105,931,013
Ensembl chr  X:105,930,398...105,931,013
JBrowse link
G Kcnh2 potassium voltage-gated channel subfamily H member 2 involved_in ISO (PMID:21536673) RGD PMID:21536673 NCBI chr 4:10,826,834...10,859,009
Ensembl chr 4:10,826,928...10,859,008
JBrowse link
G Kcnq1 potassium voltage-gated channel subfamily Q member 1 involved_in ISO (PMID:8528244) RGD PMID:8528244 NCBI chr 1:198,291,711...198,624,683
Ensembl chr 1:198,291,766...198,624,669
JBrowse link
G Nedd4l NEDD4 like E3 ubiquitin protein ligase involved_in IMP PMID:22879586 BHF-UCL PMID:22879586 RGD:8553349 NCBI chr18:58,393,759...58,726,709
Ensembl chr18:58,393,509...58,723,137
JBrowse link
G Pkp2 plakophilin 2 involved_in ISO (PMID:22889254) RGD PMID:22889254 NCBI chr11:84,661,783...84,727,730 JBrowse link
G Ryr2 ryanodine receptor 2 involved_in IEA
ISO
GO_REF:0000107
(MGI:3820489|PMID:17872467)
Ensembl
RGD
PMID:17872467 GO_REF:0000107 MGI:3820489 NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142
JBrowse link
G Scn3b sodium voltage-gated channel beta subunit 3 involved_in
acts_upstream_of_or_within
IBA
ISO
PMID:21873635
MGI:5294639 (MGI:5294649|PMID:19351516)
(PMID:20042427)
RGD PMID:19351516 PMID:20042427 PMID:21873635 MGI:5294649, RGD:13792537 NCBI chr 8:40,630,372...40,652,869
Ensembl chr 8:40,630,455...40,652,868
JBrowse link
G Scn5a sodium voltage-gated channel alpha subunit 5 involved_in ISO
IEA
(PMID:22529811)
GO_REF:0000107
RGD
Ensembl
PMID:22529811 GO_REF:0000107 NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769
JBrowse link
G Snta1 syntrophin, alpha 1 involved_in ISO (PMID:18591664) RGD PMID:18591664 NCBI chr 3:142,876,285...142,906,737
Ensembl chr 3:142,876,296...142,906,709
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 19492
    multicellular organismal process 8824
      system process 3339
        muscle system process 460
          muscle contraction 334
            muscle filament sliding + 9
            negative regulation of muscle contraction + 33
            positive regulation of muscle contraction + 51
            regulation of muscle contraction + 169
            smooth muscle contraction + 124
            striated muscle contraction + 190
paths to the root