ONTOLOGY REPORT - ANNOTATIONS |
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Term: | axon extension |
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Accession: | GO:0048675
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browse the term
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Definition: | Long distance growth of a single axon process involved in cellular development. |
Synonyms: | exact_synonym: | axon extension involved in development |
| alt_id: | GO:0048676 |
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Symbol |
Object Name |
Qualifiers
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Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G
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Auts2
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activator of transcription and developmental regulator AUTS2
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involved_in
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ISO
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(PMID:25533347)
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RGD |
PMID:25533347 |
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NCBI chr12:24,104,187...25,194,123
Ensembl chr12:24,104,192...25,194,416
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G
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Bdnf
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brain-derived neurotrophic factor
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acts_upstream_of_or_within
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ISO
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(PMID:24035762)
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RGD |
PMID:24035762 |
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NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
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G
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Cdh4
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cadherin 4
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acts_upstream_of
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ISO IEA
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(PMID:14586016) GO_REF:0000107
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RGD Ensembl |
PMID:14586016 |
GO_REF:0000107 |
NCBI chr 3:166,525,092...167,003,380
Ensembl chr 3:166,525,099...167,003,371
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G
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Cdk5
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cyclin-dependent kinase 5
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involved_in
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TAS
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PMID:11276227
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UniProt |
PMID:11276227 |
RGD:8554712 |
NCBI chr 4:11,647,098...11,651,606
Ensembl chr 4:10,754,687...10,760,112
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G
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Cdk5r1
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cyclin-dependent kinase 5 regulatory subunit 1
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involved_in
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TAS
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PMID:11276227
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UniProt |
PMID:11276227 |
RGD:8554712 |
NCBI chr10:65,484,266...65,485,467
Ensembl chr10:65,483,941...65,488,456
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G
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Cyfip1
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cytoplasmic FMR1 interacting protein 1
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involved_in
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ISO
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(PMID:16260607)
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RGD |
PMID:16260607 |
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NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
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G
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Dclk1
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doublecortin-like kinase 1
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acts_upstream_of_or_within involved_in
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ISO IBA
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MGI:1277171 (PMID:16387638) GO_REF:0000033
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RGD GO_Central |
PMID:16387638 |
GO_REF:0000033 |
NCBI chr 2:139,417,234...139,710,956
Ensembl chr 2:139,417,163...139,710,956
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G
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Dcx
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doublecortin
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acts_upstream_of_or_within
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ISO IEA
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MGI:1330861 (PMID:16387638) GO_REF:0000107
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RGD Ensembl |
PMID:16387638 |
GO_REF:0000107 |
NCBI chr X:107,430,767...107,573,612
Ensembl chr X:107,430,767...107,507,476
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G
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Dvl1
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dishevelled segment polarity protein 1
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acts_upstream_of_or_within
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ISO IEA
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(PMID:18716223) GO_REF:0000107
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RGD Ensembl |
PMID:18716223 |
GO_REF:0000107 |
NCBI chr 5:166,456,989...166,468,733
Ensembl chr 5:166,456,686...166,468,664
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G
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Edn1
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endothelin 1
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involved_in
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ISO IEA
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(PMID:18401410) GO_REF:0000107
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RGD Ensembl |
PMID:18401410 |
GO_REF:0000107 |
NCBI chr17:22,454,924...22,460,812
Ensembl chr17:22,454,420...22,460,885
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G
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Edn2
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endothelin 2
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involved_in
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IEA ISO
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GO_REF:0000107 (PMID:18401410)
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Ensembl RGD |
PMID:18401410 |
GO_REF:0000107 |
NCBI chr 5:133,751,316...133,756,814
Ensembl chr 5:133,751,217...133,756,814
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G
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Edn3
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endothelin 3
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involved_in
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ISO
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(PMID:18401410)
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RGD |
PMID:18401410 |
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NCBI chr 3:163,562,307...163,586,636
Ensembl chr 3:163,562,520...163,585,093
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G
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Ednra
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endothelin receptor type A
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involved_in
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IEA ISO
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GO_REF:0000107 (PMID:18401410)
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Ensembl RGD |
PMID:18401410 |
GO_REF:0000107 |
NCBI chr19:47,137,360...47,207,961
Ensembl chr19:30,233,571...30,297,049
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G
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Gsk3b
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glycogen synthase kinase 3 beta
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acts_upstream_of
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ISO
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MGI:106658|MGI:98927 (PMID:24623780)
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RGD |
PMID:24623780 |
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NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646
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G
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Itgb1
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integrin subunit beta 1
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acts_upstream_of_or_within
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ISO
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MGI:1306826 (PMID:12879062)
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RGD |
PMID:12879062 |
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NCBI chr19:73,602,277...73,650,271
Ensembl chr19:56,705,171...56,753,195
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G
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Lhx2
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LIM homeobox 2
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acts_upstream_of_or_within
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ISO IEA
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(PMID:21857657) GO_REF:0000107
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RGD Ensembl |
PMID:21857657 |
GO_REF:0000107 |
NCBI chr 3:22,113,619...22,143,909
Ensembl chr 3:22,126,007...22,143,908
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G
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Limk1
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LIM domain kinase 1
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acts_upstream_of
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ISO IEA
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MGI:1921382 (PMID:16204183) GO_REF:0000107
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RGD Ensembl |
PMID:16204183 |
GO_REF:0000107 |
NCBI chr12:22,026,697...22,060,605
Ensembl chr12:22,026,672...22,060,606
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G
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Map1b
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microtubule-associated protein 1B
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acts_upstream_of_or_within
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ISO IEA
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MGI:2148182 (PMID:16536727) GO_REF:0000107
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RGD Ensembl |
PMID:16536727 |
GO_REF:0000107 |
NCBI chr 2:32,551,423...32,644,471
Ensembl chr 2:30,817,261...30,910,317
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G
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Mapt
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microtubule-associated protein tau
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acts_upstream_of_or_within
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ISO
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MGI:2385630 (PMID:11891784), (PMID:16536727), (PMID:20338169)
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RGD |
PMID:11891784 PMID:16536727 PMID:20338169 |
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NCBI chr10:89,638,618...89,736,108
Ensembl chr10:89,138,627...89,236,129
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G
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Mir124-1
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microRNA 124-1
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acts_upstream_of_or_within
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ISO
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MGI:3618700 (PMID:21857657)
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RGD |
PMID:21857657 |
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NCBI chr15:38,842,014...38,842,098
Ensembl chr15:38,842,014...38,842,098
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G
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Mir124-2
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microRNA 124-2
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acts_upstream_of_or_within
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ISO
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MGI:2676807 (PMID:21857657)
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RGD |
PMID:21857657 |
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NCBI chr 2:100,134,866...100,134,974
Ensembl chr 2:100,134,866...100,134,974
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G
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Ndn
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necdin, MAGE family member
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acts_upstream_of_or_within
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ISO IEA
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MGI:2653048 (PMID:15972963) GO_REF:0000107
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RGD Ensembl |
PMID:15972963 |
GO_REF:0000107 |
NCBI chr 1:115,849,168...115,850,767
Ensembl chr 1:115,849,105...115,850,767
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G
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Ngf
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nerve growth factor
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acts_upstream_of
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ISO
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(PMID:8861722)
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RGD |
PMID:8861722 |
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NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
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G
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Nlgn3
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neuroligin 3
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involved_in
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IMP
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PMID:19406211
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BHF-UCL |
PMID:19406211 |
RGD:8554851 |
NCBI chr X:66,427,926...66,457,378
Ensembl chr X:66,429,458...66,451,876
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G
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Nrp1
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neuropilin 1
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acts_upstream_of
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ISO IEA
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MGI:107558 (PMID:12852851) GO_REF:0000107
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RGD Ensembl |
PMID:12852851 |
GO_REF:0000107 |
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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G
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Pou4f2
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POU class 4 homeobox 2
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acts_upstream_of_or_within
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ISO IEA
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MGI:102523 (PMID:11807038) GO_REF:0000107
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RGD Ensembl |
PMID:11807038 |
GO_REF:0000107 |
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
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G
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Pou4f3
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POU class 4 homeobox 3
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acts_upstream_of_or_within
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ISO IEA
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MGI:102524 (PMID:11807038) GO_REF:0000107
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RGD Ensembl |
PMID:11807038 |
GO_REF:0000107 |
NCBI chr18:34,390,205...34,392,797
Ensembl chr18:34,390,205...34,392,797
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G
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Raph1
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Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
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acts_upstream_of_or_within
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ISO IEA
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(PMID:20417104) GO_REF:0000107
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RGD Ensembl |
PMID:20417104 |
GO_REF:0000107 |
NCBI chr 9:61,907,476...61,990,170
Ensembl chr 9:61,907,758...61,961,209
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G
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RGD1359108
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similar to RIKEN cDNA 3110043O21
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involved_in
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IEA ISO ISS
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GO_REF:0000107 (PMID:27723745) GO_REF:0000024
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Ensembl RGD UniProt |
PMID:27723745 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 5:49,766,340...49,791,434
Ensembl chr 5:49,766,325...49,791,408
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G
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Rnf6
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ring finger protein 6
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acts_upstream_of
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ISO IEA
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MGI:104572 (PMID:16204183) GO_REF:0000107
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RGD Ensembl |
PMID:16204183 |
GO_REF:0000107 |
NCBI chr12:13,929,160...13,940,663
Ensembl chr12:8,816,833...8,826,847
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G
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Sema3a
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semaphorin 3A
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acts_upstream_of
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ISO
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MGI:106206 (PMID:12852851)
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RGD |
PMID:12852851 |
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NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
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G
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Sema5a
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semaphorin 5A
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acts_upstream_of_or_within involved_in
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ISO IBA
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MGI:107555 (PMID:21835343) GO_REF:0000033
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RGD GO_Central |
PMID:21835343 |
GO_REF:0000033 |
NCBI chr 2:85,020,724...85,451,938
Ensembl chr 2:83,309,843...83,741,084
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G
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Sema5b
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semaphorin 5B
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acts_upstream_of_or_within involved_in
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ISO IEA IBA
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MGI:107556 (PMID:21835343) GO_REF:0000107 GO_REF:0000033
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RGD Ensembl GO_Central |
PMID:21835343 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr11:65,102,532...65,225,456
Ensembl chr11:65,102,031...65,225,311
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G
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Sema7a
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semaphorin 7A (John Milton Hagen blood group)
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acts_upstream_of_or_within
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ISO IEA
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MGI:2683867|MGI:96610 (PMID:12879062) GO_REF:0000107
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RGD Ensembl |
PMID:12879062 |
GO_REF:0000107 |
NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
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G
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Slc9a6
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solute carrier family 9 member A6
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acts_upstream_of_or_within
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ISO
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(PMID:24035762)
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RGD |
PMID:24035762 |
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NCBI chr X:134,430,677...134,486,747
Ensembl chr X:134,420,756...134,485,375
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G
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Spg11
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SPG11 vesicle trafficking associated, spatacsin
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acts_upstream_of_or_within
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ISO IEA
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(PMID:24794856) GO_REF:0000107
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RGD Ensembl |
PMID:24794856 |
GO_REF:0000107 |
NCBI chr 3:109,007,658...109,072,904
Ensembl chr 3:109,008,135...109,072,911
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G
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Srf
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serum response factor
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acts_upstream_of
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ISO IEA
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MGI:3522206 (PMID:24623780) GO_REF:0000107
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RGD Ensembl |
PMID:24623780 |
GO_REF:0000107 |
NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
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G
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Ssna1
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SS nuclear autoantigen 1
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involved_in
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ISO IEA IBA
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(PMID:25390646) GO_REF:0000107 GO_REF:0000033 (PMID:30250060)
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RGD Ensembl GO_Central |
PMID:25390646 PMID:30250060 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr 3:8,084,949...8,086,417
Ensembl chr 3:8,084,974...8,086,356
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G
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Tnr
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tenascin R
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acts_upstream_of
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ISO IEA
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(PMID:16831557) GO_REF:0000107
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RGD Ensembl |
PMID:16831557 |
GO_REF:0000107 |
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
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G
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Ulk1
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unc-51 like autophagy activating kinase 1
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involved_in acts_upstream_of_or_within
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IBA IEA ISO
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GO_REF:0000033 GO_REF:0000104 (PMID:17389358)
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GO_Central UniProt RGD |
PMID:17389358 |
GO_REF:0000033 GO_REF:0000104 |
NCBI chr12:45,851,710...45,877,966
Ensembl chr12:45,851,710...45,877,966
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G
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Ulk2
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unc-51 like autophagy activating kinase 2
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involved_in acts_upstream_of_or_within
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IBA IEA ISO
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GO_REF:0000033 GO_REF:0000107 (PMID:17389358)
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GO_Central Ensembl RGD |
PMID:17389358 |
GO_REF:0000033 GO_REF:0000107 |
NCBI chr10:46,451,578...46,530,462
Ensembl chr10:46,454,030...46,530,407
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G
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Usp9x
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ubiquitin specific peptidase 9, X-linked
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involved_in acts_upstream_of_or_within
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ISO IEA
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(PMID:24607389) GO_REF:0000107 MGI:5438072 (PMID:23861879)
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RGD Ensembl |
PMID:23861879 PMID:24607389 |
GO_REF:0000107 |
NCBI chr X:9,588,825...9,726,993
Ensembl chr X:9,588,825...9,696,711
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G
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Vcl
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vinculin
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acts_upstream_of_or_within
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ISO IEA
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MGI:106658|MGI:1861437 (PMID:24623780) GO_REF:0000107
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RGD Ensembl |
PMID:24623780 |
GO_REF:0000107 |
NCBI chr15:3,265,776...3,355,586
Ensembl chr15:3,265,815...3,355,606
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Symbol |
Object Name |
Qualifiers
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Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G
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Alcam
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activated leukocyte cell adhesion molecule
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involved_in
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ISS
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GO_REF:0000024
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UniProt |
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GO_REF:0000024 |
NCBI chr11:48,336,123...48,536,296
Ensembl chr11:48,336,169...48,537,954
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G
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Nrp1
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neuropilin 1
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acts_upstream_of involved_in
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ISO IEA
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(PMID:9753685) (PMID:22790009) GO_REF:0000107
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RGD Ensembl |
PMID:9753685 PMID:22790009 |
GO_REF:0000107 |
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
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G
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Nrp2
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neuropilin 2
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involved_in
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IEA ISO
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GO_REF:0000107 (PMID:22790009)
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Ensembl RGD |
PMID:22790009 |
GO_REF:0000107 |
NCBI chr 9:64,122,815...64,238,007
Ensembl chr 9:64,123,132...64,237,958
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G
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Plxna3
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plexin A3
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acts_upstream_of
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ISO IEA
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MGI:107558|MGI:1096347 (PMID:11683995) GO_REF:0000107
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RGD Ensembl |
PMID:11683995 |
GO_REF:0000107 |
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
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G
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Ryk
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receptor-like tyrosine kinase
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acts_upstream_of
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ISO
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MGI:98958 (PMID:16723543)
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RGD |
PMID:16723543 |
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NCBI chr 8:103,419,338...103,492,083
Ensembl chr 8:103,419,275...103,491,698
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G
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Sema3a
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semaphorin 3A
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acts_upstream_of involved_in
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ISO
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MGI:104518|MGI:107683|MGI:96721 (PMID:11683995), (PMID:18550718), (PMID:7748561), (PMID:9753685) (PMID:22790009)
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RGD |
PMID:7748561 PMID:9753685 PMID:11683995 PMID:18550718 PMID:22790009 |
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NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
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G
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Sema3f
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semaphorin 3F
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acts_upstream_of involved_in
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ISO IEA
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MGI:107683 (PMID:11683995), (PMID:9753685) (PMID:22790009) GO_REF:0000107
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RGD Ensembl |
PMID:9753685 PMID:11683995 PMID:22790009 |
GO_REF:0000107 |
NCBI chr 8:108,357,629...108,386,569
Ensembl chr 8:108,357,629...108,387,083
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G
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Slit1
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slit guidance ligand 1
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involved_in
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ISO IEA
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(PMID:16840550) GO_REF:0000107
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RGD Ensembl |
PMID:16840550 |
GO_REF:0000107 |
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
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G
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Slit2
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slit guidance ligand 2
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involved_in
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ISO IEA
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(PMID:16840550) GO_REF:0000107
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RGD Ensembl |
PMID:16840550 |
GO_REF:0000107 |
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
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G
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Slit3
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slit guidance ligand 3
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involved_in
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ISO IEA
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(PMID:16840550) GO_REF:0000107
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RGD Ensembl |
PMID:16840550 |
GO_REF:0000107 |
NCBI chr10:19,571,798...20,156,634
Ensembl chr10:19,571,684...20,156,634
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G
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Smo
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smoothened, frizzled class receptor
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IMP
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RGD |
PMID:19447091 |
RGD:2324988 |
NCBI chr 4:58,343,626...58,373,823
Ensembl chr 4:58,343,529...58,373,829
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G
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Wnt5a
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Wnt family member 5A
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acts_upstream_of
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ISO IEA
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MGI:101766 (PMID:16723543) GO_REF:0000107
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RGD Ensembl |
PMID:16723543 |
GO_REF:0000107 |
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
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Symbol |
Object Name |
Qualifiers
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Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
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G
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Lamb2
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laminin subunit beta 2
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acts_upstream_of_or_within
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ISO IEA
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MGI:1856026 (PMID:9396756) GO_REF:0000107
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RGD Ensembl |
PMID:9396756 |
GO_REF:0000107 |
NCBI chr 8:109,178,367...109,190,552
Ensembl chr 8:109,178,409...109,190,549
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G
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Ntrk3
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neurotrophic receptor tyrosine kinase 3
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acts_upstream_of
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ISO IEA
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MGI:97380 (PMID:16142215) GO_REF:0000107
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RGD Ensembl |
PMID:16142215 |
GO_REF:0000107 |
NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
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G
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Tnr
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tenascin R
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acts_upstream_of
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ISO IEA
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MGI:2154583 (PMID:16870730) GO_REF:0000107
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RGD Ensembl |
PMID:16870730 |
GO_REF:0000107 |
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Actr3
|
actin related protein 3
|
|
IMP
|
|
RGD |
PMID:19846719 |
RGD:11530054 |
NCBI chr13:36,800,739...36,843,837
Ensembl chr13:36,800,093...36,844,124
|
|
G
|
Arhgap4
|
Rho GTPase activating protein 4
|
|
IMP
|
|
RGD |
PMID:17804252 |
RGD:2313143 |
NCBI chr X:151,636,071...151,651,528
Ensembl chr X:151,632,454...151,651,128
|
|
G
|
Ccr5
|
C-C motif chemokine receptor 5
|
|
IMP
|
|
RGD |
PMID:16537566 |
RGD:4890441 |
NCBI chr 8:123,752,423...123,757,538
Ensembl chr 8:123,752,325...123,759,260
|
|
G
|
Cdh1
|
cadherin 1
|
|
IMP
|
|
RGD |
PMID:23226367 |
RGD:151665335 |
NCBI chr19:34,492,371...34,561,775
Ensembl chr19:34,492,371...34,561,775
|
|
G
|
Cdk5
|
cyclin-dependent kinase 5
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:1197518 (PMID:22573681) GO_REF:0000107
|
RGD Ensembl |
PMID:22573681 |
GO_REF:0000107 |
NCBI chr 4:11,647,098...11,651,606
Ensembl chr 4:10,754,687...10,760,112
|
|
G
|
Cdkl3
|
cyclin-dependent kinase-like 3
|
acts_upstream_of_or_within involved_in
|
IMP ISO IBA
|
PMID:20347982 (PMID:20347982) GO_REF:0000033
|
RGD GO_Central |
PMID:20347982 PMID:20347982 |
GO_REF:0000033, RGD:8693354 |
NCBI chr10:36,263,212...36,349,268
Ensembl chr10:36,266,977...36,349,268
|
|
G
|
Dip2b
|
disco-interacting protein 2 homolog B
|
involved_in
|
ISO
|
(PMID:32153366)
|
RGD |
PMID:32153366 |
|
NCBI chr 7:131,174,575...131,350,417
Ensembl chr 7:131,174,567...131,349,092
|
|
G
|
Draxin
|
dorsal inhibitory axon guidance protein
|
acts_upstream_of_or_within
|
ISO
|
(PMID:20621059)
|
RGD |
PMID:20621059 |
|
NCBI chr 5:158,530,149...158,563,457
Ensembl chr 5:158,530,342...158,564,483
|
|
G
|
Fstl4
|
follistatin-like 4
|
NOT|acts_upstream_of_or_within
|
ISO
|
(PMID:24573299)
|
RGD |
PMID:24573299 |
|
NCBI chr10:36,911,422...37,344,545
Ensembl chr10:36,911,420...37,338,588
|
|
G
|
Ifrd1
|
interferon-related developmental regulator 1
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:97321 (PMID:18052984) GO_REF:0000107
|
RGD Ensembl |
PMID:18052984 |
GO_REF:0000107 |
NCBI chr 6:57,269,395...57,317,833
Ensembl chr 6:57,269,384...57,288,990
|
|
G
|
Kiaa0319
|
KIAA0319 homolog
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:28334068) GO_REF:0000107
|
RGD Ensembl |
PMID:28334068 |
GO_REF:0000107 |
NCBI chr17:40,162,512...40,226,666
Ensembl chr17:40,165,084...40,225,653
|
|
G
|
Mag
|
myelin-associated glycoprotein
|
involved_in
|
IMP
|
PMID:9298990
|
UniProt |
PMID:9298990 |
RGD:12050149 |
NCBI chr 1:86,148,227...86,163,726
Ensembl chr 1:86,148,228...86,163,656
|
|
G
|
Map2
|
microtubule-associated protein 2
|
involved_in
|
IMP ISO
|
PMID:28426968 (PMID:28426968)
|
RGD |
PMID:28426968 PMID:28426968 |
RGD:13514087 |
NCBI chr 9:67,723,422...67,981,886
Ensembl chr 9:67,723,371...67,979,809
|
|
G
|
Mt3
|
metallothionein 3
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:16601975), (PMID:17712581)
|
UniProt Ensembl RGD |
PMID:16601975 PMID:17712581 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr19:10,848,754...10,850,158
Ensembl chr19:10,848,755...10,850,158
|
|
G
|
Nrp1
|
neuropilin 1
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:107558 (PMID:12852851) GO_REF:0000107
|
RGD Ensembl |
PMID:12852851 |
GO_REF:0000107 |
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
|
|
G
|
Ntn1
|
netrin 1
|
acts_upstream_of_or_within
|
ISO
|
(PMID:10704383)
|
RGD |
PMID:10704383 |
|
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
|
|
G
|
Ptprs
|
protein tyrosine phosphatase, receptor type, S
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:19780196)
|
UniProt RGD |
PMID:19780196 |
GO_REF:0000024 |
NCBI chr 9:1,245,408...1,307,015
Ensembl chr 9:1,245,410...1,306,947
|
|
G
|
Rnf6
|
ring finger protein 6
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:104572 (PMID:16204183) GO_REF:0000107
|
RGD Ensembl |
PMID:16204183 |
GO_REF:0000107 |
NCBI chr12:13,929,160...13,940,663
Ensembl chr12:8,816,833...8,826,847
|
|
G
|
Rtn4
|
reticulon 4
|
involved_in
|
ISS ISO IEA IDA
|
PMID:10667797 (PMID:20573699) GO_REF:0000107 (PMID:10667797)
|
RGD Ensembl |
PMID:10667797 PMID:20573699 PMID:10667797 PMID:20573699 |
GO_REF:0000107, RGD:8553459, RGD:8554113 |
NCBI chr14:103,450,074...103,497,687
Ensembl chr14:103,449,930...103,497,686
|
|
G
|
Rtn4r
|
reticulon 4 receptor
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:22923615)
|
UniProt RGD |
PMID:22923615 |
GO_REF:0000024 |
NCBI chr11:82,844,309...82,869,251
Ensembl chr11:82,844,309...82,869,466
|
|
G
|
Sema3a
|
semaphorin 3A
|
acts_upstream_of_or_within
|
IDA ISO
|
MGI:106206 (PMID:12852851)
|
RGD |
PMID:12852851 PMID:12077190 |
RGD:628318 |
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
|
|
G
|
Sema3g
|
semaphorin 3G
|
involved_in
|
ISO IEA
|
(PMID:16098142) GO_REF:0000107
|
RGD Ensembl |
PMID:16098142 |
GO_REF:0000107 |
NCBI chr16:6,413,589...6,425,221
Ensembl chr16:6,413,589...6,425,221
|
|
G
|
Sema4f
|
semaphorin 4F
|
acts_upstream_of_or_within
|
IDA
|
PMID:10051670
|
MGI |
PMID:10051670 |
RGD:69991 |
NCBI chr 4:115,411,411...115,437,721
Ensembl chr 4:115,411,417...115,437,721
|
|
G
|
Sema6c
|
semaphorin 6C
|
involved_in
|
ISO
|
(PMID:12110693)
|
RGD |
PMID:12110693 |
|
NCBI chr 2:182,733,635...182,750,066
Ensembl chr 2:182,737,474...182,746,856
|
|
G
|
Sema6d
|
semaphorin 6D
|
involved_in
|
ISO
|
(PMID:12110693)
|
RGD |
PMID:12110693 |
|
NCBI chr 3:111,883,415...111,941,100
Ensembl chr 3:111,883,872...111,941,094
|
|
G
|
Slit2
|
slit guidance ligand 2
|
acts_upstream_of_or_within
|
ISO
|
(PMID:12879062)
|
RGD |
PMID:12879062 |
|
NCBI chr14:62,616,337...62,955,934
Ensembl chr14:62,617,067...62,955,948
|
|
G
|
Tnr
|
tenascin R
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:16831557) GO_REF:0000107
|
RGD Ensembl |
PMID:16831557 |
GO_REF:0000107 |
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
|
|
G
|
Trim46
|
tripartite motif-containing 46
|
involved_in
|
IMP
|
PMID:28426968
|
ARUK-UCL |
PMID:28426968 |
RGD:13514087 |
NCBI chr 2:174,641,494...174,654,237
Ensembl chr 2:174,641,496...174,654,141
|
|
G
|
Ttc3
|
tetratricopeptide repeat domain 3
|
involved_in
|
ISO
|
(PMID:17488780)
|
RGD |
PMID:17488780 |
|
NCBI chr11:47,158,766...47,258,612
Ensembl chr11:33,688,952...33,788,975
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Hdac6
|
histone deacetylase 6
|
|
IMP
|
|
RGD |
PMID:19884510 |
RGD:9681717 |
NCBI chr X:17,222,538...17,244,373
Ensembl chr X:14,551,044...14,572,441
|
|
G
|
Nrp1
|
neuropilin 1
|
acts_upstream_of_or_within
|
IMP IEA ISO
|
GO_REF:0000107 (PMID:9753685)
|
Ensembl RGD |
PMID:9753685 PMID:9288754 |
GO_REF:0000107, RGD:633436 |
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
|
|
G
|
Plxna3
|
plexin A3
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:107558|MGI:1096347 (PMID:11683995) GO_REF:0000107
|
RGD Ensembl |
PMID:11683995 |
GO_REF:0000107 |
NCBI chr X:152,115,699...152,131,608
Ensembl chr X:152,115,819...152,131,603
|
|
G
|
Ryk
|
receptor-like tyrosine kinase
|
acts_upstream_of_or_within
|
ISO
|
MGI:98958 (PMID:16723543)
|
RGD |
PMID:16723543 |
|
NCBI chr 8:103,419,338...103,492,083
Ensembl chr 8:103,419,275...103,491,698
|
|
G
|
Sema3a
|
semaphorin 3A
|
acts_upstream_of_or_within
|
ISO
|
MGI:104518|MGI:107683|MGI:96721 (PMID:11683995), (PMID:18550718), (PMID:7748561), (PMID:9753685)
|
RGD |
PMID:7748561 PMID:9753685 PMID:11683995 PMID:18550718 |
|
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
|
|
G
|
Sema3f
|
semaphorin 3F
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:107683 (PMID:11683995), (PMID:9753685) GO_REF:0000107
|
RGD Ensembl |
PMID:9753685 PMID:11683995 |
GO_REF:0000107 |
NCBI chr 8:108,357,629...108,386,569
Ensembl chr 8:108,357,629...108,387,083
|
|
G
|
Sema5a
|
semaphorin 5A
|
involved_in
|
IMP
|
PMID:15603739
|
UniProt |
PMID:15603739 |
RGD:8553809 |
NCBI chr 2:85,020,724...85,451,938
Ensembl chr 2:83,309,843...83,741,084
|
|
G
|
Slit1
|
slit guidance ligand 1
|
|
IDA
|
|
RGD |
PMID:15632296 |
RGD:1358459 |
NCBI chr 1:240,409,559...240,558,127
Ensembl chr 1:240,409,561...240,558,127
|
|
G
|
Wnt3
|
Wnt family member 3
|
acts_upstream_of_or_within
|
ISO
|
(PMID:18716223)
|
RGD |
PMID:18716223 |
|
NCBI chr10:88,680,198...88,724,170
Ensembl chr10:88,680,248...88,724,099
|
|
G
|
Wnt3a
|
Wnt family member 3A
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:18716223) GO_REF:0000107
|
RGD Ensembl |
PMID:18716223 |
GO_REF:0000107 |
NCBI chr10:44,034,174...44,078,366
Ensembl chr10:44,034,194...44,078,324
|
|
G
|
Wnt5a
|
Wnt family member 5A
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:101766 (PMID:16723543) GO_REF:0000107
|
RGD Ensembl |
PMID:16723543 |
GO_REF:0000107 |
NCBI chr16:3,702,300...3,724,860
Ensembl chr16:3,697,032...3,718,234
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Kiaa0319
|
KIAA0319 homolog
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:28334068) GO_REF:0000107 MGI:4362922 (PMID:28334068)
|
RGD Ensembl |
PMID:28334068 |
GO_REF:0000107 |
NCBI chr17:40,162,512...40,226,666
Ensembl chr17:40,165,084...40,225,653
|
|
G
|
Tnr
|
tenascin R
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:2154583 (PMID:16870730) GO_REF:0000107
|
RGD Ensembl |
PMID:16870730 |
GO_REF:0000107 |
NCBI chr13:71,751,714...72,172,731
Ensembl chr13:72,091,585...72,167,641
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Adcy10
|
adenylate cyclase 10
|
|
IMP
|
|
RGD |
PMID:22649251 |
RGD:329347828 |
NCBI chr13:77,747,752...77,833,952
Ensembl chr13:77,768,468...77,833,951
|
|
G
|
Adnp
|
activity-dependent neuroprotector homeobox
|
|
IDA
|
|
RGD |
PMID:19047645 |
RGD:2312772 |
NCBI chr 3:156,886,921...156,921,500
Ensembl chr 3:156,891,381...156,917,312
|
|
G
|
Anapc2
|
anaphase promoting complex subunit 2
|
|
IMP
|
|
RGD |
PMID:19167333 |
RGD:2306262 |
NCBI chr 3:8,086,434...8,098,182
Ensembl chr 3:8,086,462...8,098,178
|
|
G
|
Apoe
|
apolipoprotein E
|
|
IDA
|
|
RGD |
PMID:21040802 |
RGD:6904146 |
NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932
|
|
G
|
Arhgap32
|
Rho GTPase activating protein 32
|
|
IMP
|
|
RGD |
PMID:23226367 |
RGD:151665335 |
NCBI chr 8:30,421,269...30,681,653
Ensembl chr 8:30,421,515...30,678,454
|
|
G
|
Atp5mc1
|
ATP synthase membrane subunit c locus 1
|
|
IMP
|
|
RGD |
PMID:22209705 |
RGD:13800744 |
NCBI chr10:81,024,056...81,026,780
Ensembl chr10:81,023,925...81,027,124 Ensembl chr10:81,023,925...81,027,124
|
|
G
|
Bdnf
|
brain-derived neurotrophic factor
|
NOT|acts_upstream_of_or_within
|
ISO
|
(PMID:24573299)
|
RGD |
PMID:24573299 |
|
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
|
|
G
|
Cdh4
|
cadherin 4
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:14586016) GO_REF:0000107
|
RGD Ensembl |
PMID:14586016 |
GO_REF:0000107 |
NCBI chr 3:166,525,092...167,003,380
Ensembl chr 3:166,525,099...167,003,371
|
|
G
|
Cdkl5
|
cyclin-dependent kinase-like 5
|
involved_in
|
IMP IBA
|
PMID:20861382 GO_REF:0000033
|
GO_Central |
PMID:20861382 |
GO_REF:0000033, RGD:8554575 |
NCBI chr X:33,757,605...33,988,075
Ensembl chr X:33,821,257...33,986,582
|
|
G
|
Ctnnd2
|
catenin delta 2
|
|
IMP
|
|
RGD |
PMID:32554807 |
RGD:407532699 |
NCBI chr 2:81,168,525...82,016,495
Ensembl chr 2:81,167,117...82,015,764
|
|
G
|
Cyfip1
|
cytoplasmic FMR1 interacting protein 1
|
|
IMP
|
|
RGD |
PMID:16260607 |
RGD:11557987 |
NCBI chr 1:106,710,924...106,799,393
Ensembl chr 1:106,711,016...106,799,386
|
|
G
|
Dbn1
|
drebrin 1
|
involved_in
|
IMP IBA
|
GO_REF:0000033
|
GO_Central RGD |
PMID:19222710 |
GO_REF:0000033, RGD:10395284 |
NCBI chr17:9,150,608...9,164,982
Ensembl chr17:9,150,659...9,164,984
|
|
G
|
Dbnl
|
drebrin-like
|
involved_in
|
IBA
|
GO_REF:0000033
|
GO_Central |
|
GO_REF:0000033 |
NCBI chr14:80,666,115...80,681,155
Ensembl chr14:80,666,124...80,681,155
|
|
G
|
Disc1
|
DISC1 scaffold protein
|
|
IMP
|
|
RGD |
PMID:17202468 |
RGD:4107038 |
NCBI chr19:53,014,201...53,223,617
Ensembl chr19:53,014,616...53,219,778
|
|
G
|
Eif2b2
|
eukaryotic translation initiation factor 2B subunit beta
|
|
IMP
|
|
RGD |
PMID:23616526 |
RGD:11041877 |
NCBI chr 6:104,866,926...104,873,351
Ensembl chr 6:104,866,753...104,873,353
|
|
G
|
Eif4g2
|
eukaryotic translation initiation factor 4, gamma 2
|
|
IMP
|
|
RGD |
PMID:23616526 |
RGD:11041877 |
NCBI chr 1:174,616,102...174,628,252
Ensembl chr 1:165,181,434...165,193,588
|
|
G
|
Ep300
|
E1A binding protein p300
|
|
IMP
|
|
RGD |
PMID:19339625 |
RGD:2308917 |
NCBI chr 7:114,987,857...115,058,652
Ensembl chr 7:113,106,247...113,136,088 Ensembl chr 7:113,106,247...113,136,088
|
|
G
|
Fn1
|
fibronectin 1
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:12879062) GO_REF:0000107
|
RGD Ensembl |
PMID:12879062 |
GO_REF:0000107 |
NCBI chr 9:80,645,507...80,714,200
Ensembl chr 9:73,196,044...73,264,678
|
|
G
|
Fxn
|
frataxin
|
|
IMP
|
|
RGD |
PMID:18809400 |
RGD:2306797 |
NCBI chr 1:221,874,007...221,897,543
Ensembl chr 1:221,872,420...221,897,540
|
|
G
|
Gdi1
|
GDP dissociation inhibitor 1
|
|
IMP
|
|
RGD |
PMID:9620768 |
RGD:13208823 |
NCBI chr X:152,087,611...152,094,274
Ensembl chr X:152,087,444...152,094,272
|
|
G
|
Golga4
|
golgin A4
|
involved_in
|
ISO
|
(PMID:22705394)
|
RGD |
PMID:22705394 |
|
NCBI chr 8:118,208,200...118,285,003
|
|
G
|
Gsk3b
|
glycogen synthase kinase 3 beta
|
acts_upstream_of_or_within
|
ISO
|
MGI:106658|MGI:98927 (PMID:24623780)
|
RGD |
PMID:24623780 |
|
NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646
|
|
G
|
Ilk
|
integrin-linked kinase
|
|
IMP
|
shorter axons following Ilk inhibition or knock-down
|
RGD |
PMID:17490631 |
RGD:2301744 |
NCBI chr 1:160,088,839...160,095,140
Ensembl chr 1:160,088,897...160,095,140
|
|
G
|
Islr2
|
immunoglobulin superfamily containing leucine-rich repeat 2
|
involved_in
|
IBA ISO
|
GO_REF:0000033 (PMID:19755105)
|
GO_Central RGD |
PMID:19755105 |
GO_REF:0000033 |
NCBI chr 8:58,608,165...58,616,246
Ensembl chr 8:58,608,709...58,614,650
|
|
G
|
L1cam
|
L1 cell adhesion molecule
|
involved_in
|
IMP
|
PMID:18519736
|
UniProt |
PMID:18519736 |
RGD:10054086 |
NCBI chr X:151,597,270...151,623,776
Ensembl chr X:151,597,277...151,623,857
|
|
G
|
Limk1
|
LIM domain kinase 1
|
involved_in acts_upstream_of_or_within
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 MGI:1921382 (PMID:16204183)
|
UniProt Ensembl RGD |
PMID:16204183 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr12:22,026,697...22,060,605
Ensembl chr12:22,026,672...22,060,606
|
|
G
|
Lrp1
|
LDL receptor related protein 1
|
|
IMP
|
|
RGD |
PMID:21040802 |
RGD:6904146 |
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
|
|
G
|
Macf1
|
microtubule-actin crosslinking factor 1
|
involved_in
|
ISO
|
(PMID:22705394)
|
RGD |
PMID:22705394 |
|
NCBI chr 5:135,623,734...135,949,097
Ensembl chr 5:135,623,742...135,945,905
|
|
G
|
Map1b
|
microtubule-associated protein 1B
|
|
IMP
|
|
RGD |
PMID:8838670 |
RGD:2304034 |
NCBI chr 2:32,551,423...32,644,471
Ensembl chr 2:30,817,261...30,910,317
|
|
G
|
Map3k13
|
mitogen-activated protein kinase kinase kinase 13
|
involved_in
|
ISO IEA
|
(PMID:27511108) GO_REF:0000107
|
RGD Ensembl |
PMID:27511108 |
GO_REF:0000107 |
NCBI chr11:79,094,087...79,235,181
Ensembl chr11:79,097,247...79,235,181
|
|
G
|
Mapt
|
microtubule-associated protein tau
|
involved_in
|
ISO ISS
|
(PMID:1389180) GO_REF:0000024
|
RGD UniProt |
PMID:1389180 |
GO_REF:0000024 |
NCBI chr10:89,638,618...89,736,108
Ensembl chr10:89,138,627...89,236,129
|
|
G
|
Myo5b
|
myosin Vb
|
|
IMP
|
|
RGD |
PMID:23770993 |
RGD:11533641 |
NCBI chr18:68,038,759...68,341,568
Ensembl chr18:68,038,759...68,338,745
|
|
G
|
Ndel1
|
nudE neurodevelopment protein 1-like 1
|
|
IMP
|
|
RGD |
PMID:17202468 |
RGD:4107038 |
NCBI chr10:53,505,628...53,582,025
Ensembl chr10:53,516,491...53,570,907
|
|
G
|
Ngf
|
nerve growth factor
|
acts_upstream_of_or_within
|
ISO
|
(PMID:18052984), (PMID:8861722)
|
RGD |
PMID:8861722 PMID:18052984 |
|
NCBI chr 2:189,901,058...189,954,452
Ensembl chr 2:189,901,058...189,954,452
|
|
G
|
Ntn1
|
netrin 1
|
involved_in acts_upstream_of_or_within
|
IDA ISO
|
PMID:23453953 (PMID:10704383)
|
RGD |
PMID:10704383 PMID:23453953 |
RGD:10054078 |
NCBI chr10:52,899,933...53,098,591
Ensembl chr10:52,899,934...53,085,326
|
|
G
|
Pafah1b1
|
platelet-activating factor acetylhydrolase 1b, regulatory subunit 1
|
|
IMP
|
|
RGD |
PMID:17522326 PMID:17202468 |
RGD:4107033, RGD:4107038 |
NCBI chr10:60,031,441...60,090,259
Ensembl chr10:59,534,117...59,591,808
|
|
G
|
Pak1
|
p21 (RAC1) activated kinase 1
|
|
IMP
|
|
RGD |
PMID:23453953 |
RGD:10054078 |
NCBI chr 1:152,111,172...152,226,390
Ensembl chr 1:152,111,188...152,226,383
|
|
G
|
Pou4f2
|
POU class 4 homeobox 2
|
involved_in
|
ISS IEA ISO
|
GO_REF:0000024 GO_REF:0000107 (PMID:10357904)
|
UniProt Ensembl RGD |
PMID:10357904 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr19:29,486,686...29,490,327
Ensembl chr19:29,486,686...29,490,327
|
|
G
|
Rpl4
|
ribosomal protein L4
|
|
IMP
|
|
RGD |
PMID:10964612 |
RGD:11039443 |
NCBI chr 8:64,671,177...64,676,301
Ensembl chr 8:64,671,160...64,676,306
|
|
G
|
Rufy3
|
RUN and FYVE domain containing 3
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:24720729)
|
UniProt RGD |
PMID:24720729 |
GO_REF:0000024 |
NCBI chr14:19,431,530...19,506,476
Ensembl chr14:19,432,524...19,507,004
|
|
G
|
Sema7a
|
semaphorin 7A (John Milton Hagen blood group)
|
involved_in acts_upstream_of_or_within
|
ISO IEA
|
(PMID:12879062) GO_REF:0000107
|
RGD Ensembl |
PMID:12879062 |
GO_REF:0000107 |
NCBI chr 8:58,348,448...58,370,536
Ensembl chr 8:58,348,448...58,370,536
|
|
G
|
Shtn1
|
shootin 1
|
involved_in
|
IDA
|
PMID:23453953 PMID:18519736
|
UniProt |
PMID:23453953 PMID:18519736 |
RGD:10054078, RGD:10054086 |
NCBI chr 1:258,121,966...258,225,861
Ensembl chr 1:258,121,968...258,228,265
|
|
G
|
Smurf1
|
SMAD specific E3 ubiquitin protein ligase 1
|
|
IMP
|
|
RGD |
PMID:23226367 |
RGD:151665335 |
NCBI chr12:14,748,717...14,840,273
Ensembl chr12:9,635,025...9,726,519
|
|
G
|
Srf
|
serum response factor
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:1861437|MGI:3522206|MGI:98927 (PMID:24623780) GO_REF:0000107
|
RGD Ensembl |
PMID:24623780 |
GO_REF:0000107 |
NCBI chr 9:14,426,453...14,435,734
Ensembl chr 9:14,426,472...14,435,733
|
|
G
|
Tnfrsf12a
|
TNF receptor superfamily member 12A
|
acts_upstream_of_or_within
|
ISO
|
(PMID:14573547)
|
RGD |
PMID:14573547 |
|
NCBI chr10:12,707,077...12,709,071
Ensembl chr10:12,689,890...12,709,045
|
|
G
|
Trpc5
|
transient receptor potential cation channel, subfamily C, member 5
|
|
IMP
|
|
RGD |
PMID:21984481 |
RGD:10043835 |
NCBI chr X:107,946,163...108,230,991
Ensembl chr X:107,939,131...108,230,991
|
|
G
|
Trpv2
|
transient receptor potential cation channel, subfamily V, member 2
|
involved_in
|
IEA ISO
|
GO_REF:0000107 (PMID:20357111)
|
Ensembl RGD |
PMID:20357111 |
GO_REF:0000107 |
NCBI chr10:47,265,524...47,294,263
Ensembl chr10:47,272,931...47,294,260
|
|
G
|
Twf2
|
twinfilin actin-binding protein 2
|
involved_in
|
ISO IEA
|
(PMID:17910947) GO_REF:0000107
|
RGD Ensembl |
PMID:17910947 |
GO_REF:0000107 |
NCBI chr 8:106,845,253...106,858,298
Ensembl chr 8:106,845,253...106,858,298
|
|
G
|
Zfyve27
|
zinc finger FYVE-type containing 27
|
involved_in
|
ISS ISO IBA IEA
|
GO_REF:0000024 (PMID:24251978) GO_REF:0000033 GO_REF:0000107
|
UniProt RGD GO_Central Ensembl |
PMID:24251978 |
GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 |
NCBI chr 1:240,979,831...241,003,193
Ensembl chr 1:240,979,842...241,003,193
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Bmpr2
|
bone morphogenetic protein receptor type 2
|
involved_in
|
ISO IEA
|
UniProtKB:O35607 (PMID:24052814) GO_REF:0000107
|
RGD Ensembl |
PMID:24052814 |
GO_REF:0000107 |
NCBI chr 9:61,192,718...61,307,280
Ensembl chr 9:61,190,566...61,301,809
|
|
G
|
Cxcl12
|
C-X-C motif chemokine ligand 12
|
|
IMP
|
|
RGD |
PMID:18701697 |
RGD:2306571 |
NCBI chr 4:150,388,326...150,401,173
Ensembl chr 4:150,388,325...150,401,168
|
|
G
|
Dscam
|
DS cell adhesion molecule
|
involved_in
|
ISO IBA IEA IMP
|
(PMID:18585357) GO_REF:0000033 GO_REF:0000107
|
RGD GO_Central Ensembl |
PMID:18585357 PMID:18585357 |
GO_REF:0000033 GO_REF:0000107, RGD:8553710 |
NCBI chr11:35,921,924...36,507,100
Ensembl chr11:35,926,896...36,507,415
|
|
G
|
Megf8
|
multiple EGF-like-domains 8
|
involved_in
|
ISS ISO IEA
|
GO_REF:0000024 (PMID:24052814) GO_REF:0000107
|
CAFA RGD Ensembl |
PMID:24052814 |
GO_REF:0000024 GO_REF:0000107 |
NCBI chr 1:80,902,236...80,951,614
Ensembl chr 1:80,902,574...80,951,613
|
|
G
|
Nrp1
|
neuropilin 1
|
involved_in
|
ISO IEA
|
(PMID:21658587) GO_REF:0000107
|
RGD Ensembl |
PMID:21658587 |
GO_REF:0000107 |
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
|
|
G
|
Sema5a
|
semaphorin 5A
|
involved_in
|
IMP
|
PMID:15603739
|
UniProt |
PMID:15603739 |
RGD:8553809 |
NCBI chr 2:85,020,724...85,451,938
Ensembl chr 2:83,309,843...83,741,084
|
|
G
|
Vegfa
|
vascular endothelial growth factor A
|
NOT|involved_in
|
ISO
|
(PMID:21658587)
|
RGD |
PMID:21658587 |
|
NCBI chr 9:14,955,300...14,970,641
Ensembl chr 9:14,955,300...14,970,641
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Lrp1
|
LDL receptor related protein 1
|
|
IDA
|
|
RGD |
PMID:23867460 |
RGD:13800520 |
NCBI chr 7:63,380,325...63,461,029
Ensembl chr 7:63,380,356...63,460,910
|
|
G
|
Ntrk3
|
neurotrophic receptor tyrosine kinase 3
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:97380 (PMID:16142215) GO_REF:0000107
|
RGD Ensembl |
PMID:16142215 |
GO_REF:0000107 |
NCBI chr 1:132,116,472...132,503,849
Ensembl chr 1:132,132,849...132,503,286
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Abl1
|
ABL proto-oncogene 1, non-receptor tyrosine kinase
|
involved_in
|
ISO IEA
|
(PMID:24520051) GO_REF:0000107
|
RGD Ensembl |
PMID:24520051 |
GO_REF:0000107 |
NCBI chr 3:14,979,853...15,083,065
Ensembl chr 3:14,979,853...15,083,065
|
|
G
|
Barhl2
|
BarH-like homeobox 2
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:12657654) GO_REF:0000107
|
RGD Ensembl |
PMID:12657654 |
GO_REF:0000107 |
NCBI chr14:3,340,465...3,345,362
Ensembl chr14:3,340,465...3,345,353
|
|
G
|
Bdnf
|
brain-derived neurotrophic factor
|
|
IMP
|
|
RGD |
PMID:14697662 |
RGD:8655852 |
NCBI chr 3:96,165,042...96,215,621
Ensembl chr 3:96,165,042...96,215,615
|
|
G
|
Clasp2
|
cytoplasmic linker associated protein 2
|
involved_in
|
ISO
|
(PMID:24520051)
|
RGD |
PMID:24520051 |
|
NCBI chr 8:113,677,345...113,859,957
Ensembl chr 8:113,677,284...113,858,731
|
|
G
|
Cttn
|
cortactin
|
involved_in
|
IMP
|
PMID:21210813
|
UniProt |
PMID:21210813 |
RGD:10047315 |
NCBI chr 1:199,599,710...199,635,254
Ensembl chr 1:199,599,710...199,635,164
|
|
G
|
Dnm2
|
dynamin 2
|
involved_in
|
IMP
|
PMID:21210813
|
UniProt |
PMID:21210813 |
RGD:10047315 |
NCBI chr 8:19,978,313...20,060,162
Ensembl chr 8:19,978,400...20,060,157
|
|
G
|
Dpysl2
|
dihydropyrimidinase-like 2
|
|
NAS
|
|
RGD |
PMID:7472434 |
RGD:728576 |
NCBI chr15:45,181,041...45,287,065
Ensembl chr15:41,005,551...41,111,829
|
|
G
|
Gsk3b
|
glycogen synthase kinase 3 beta
|
|
IMP
|
|
RGD |
PMID:15652487 |
RGD:10045567 |
NCBI chr11:76,004,502...76,154,665
Ensembl chr11:62,504,316...62,648,646
|
|
G
|
Mgll
|
monoglyceride lipase
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:20962221) GO_REF:0000107
|
RGD Ensembl |
PMID:20962221 |
GO_REF:0000107 |
NCBI chr 4:121,192,186...121,294,187
Ensembl chr 4:121,192,195...121,294,179
|
|
G
|
Nkx6-1
|
NK6 homeobox 1
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:2386119 (PMID:19592574) GO_REF:0000107
|
RGD Ensembl |
PMID:19592574 |
GO_REF:0000107 |
NCBI chr14:7,969,756...7,976,689
Ensembl chr14:7,969,756...7,976,681
|
|
G
|
Olfm1
|
olfactomedin 1
|
involved_in
|
ISS ISO
|
GO_REF:0000024 (PMID:22923615)
|
UniProt RGD |
PMID:22923615 |
GO_REF:0000024 |
NCBI chr 3:11,520,522...11,558,240
Ensembl chr 3:11,520,729...11,558,239
|
|
G
|
Rab21
|
RAB21, member RAS oncogene family
|
involved_in
|
IDA
|
PMID:19745841
|
UniProt |
PMID:19745841 |
RGD:8554110 |
NCBI chr 7:50,904,050...50,928,890
Ensembl chr 7:50,904,057...50,928,839
|
|
G
|
Sin3a
|
SIN3 transcription regulator family member A
|
involved_in
|
ISO IEA
|
(PMID:27399968) GO_REF:0000107
|
RGD Ensembl |
PMID:27399968 |
GO_REF:0000107 |
NCBI chr 8:57,481,539...57,536,195
Ensembl chr 8:57,481,573...57,536,192
|
|
G
|
Smurf1
|
SMAD specific E3 ubiquitin protein ligase 1
|
|
ISO
|
|
RGD |
PMID:17728459 |
RGD:2302549 |
NCBI chr12:14,748,717...14,840,273
Ensembl chr12:9,635,025...9,726,519
|
|
G
|
Ttl
|
tubulin tyrosine ligase
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:3584264 (PMID:15899979) GO_REF:0000107
|
RGD Ensembl |
PMID:15899979 |
GO_REF:0000107 |
NCBI chr 3:116,298,813...116,328,538
Ensembl chr 3:116,298,797...116,328,538
|
|
G
|
Wdr36
|
WD repeat domain 36
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:20631153) GO_REF:0000107
|
RGD Ensembl |
PMID:20631153 |
GO_REF:0000107 |
NCBI chr18:24,473,657...24,501,773
Ensembl chr18:24,473,663...24,508,092
|
|
|
|
Symbol |
Object Name |
Qualifiers
|
Evidence |
Notes |
Source |
PubMed Reference(s) |
RGD Reference(s) |
Position |
|
G
|
Nrp1
|
neuropilin 1
|
acts_upstream_of_or_within
|
ISO IEA
|
(PMID:15814794) GO_REF:0000107
|
RGD Ensembl |
PMID:15814794 |
GO_REF:0000107 |
NCBI chr19:56,359,455...56,514,628
Ensembl chr19:56,359,455...56,513,633
|
|
G
|
Plxna4
|
plexin A4
|
acts_upstream_of_or_within
|
ISO IEA
|
MGI:3578655 (PMID:15814794) GO_REF:0000107
|
RGD Ensembl |
PMID:15814794 |
GO_REF:0000107 |
NCBI chr 4:60,720,246...61,162,206
Ensembl chr 4:60,720,255...61,162,206
|
|
G
|
Sema3a
|
semaphorin 3A
|
involved_in
|
ISO IEA
|
(PMID:18053124) GO_REF:0000107 (PMID:15155748)
|
RGD Ensembl |
PMID:15155748 PMID:18053124 |
GO_REF:0000107 |
NCBI chr 4:21,282,398...21,754,834
Ensembl chr 4:21,287,982...21,494,432
|
|
Term paths to the root
|