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ONTOLOGY REPORT - ANNOTATIONS

Term:axon extension involved in axon guidance
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Accession:GO:0048846 term browser browse the term
Definition:The long distance growth of a single cell process, that is involved in the migration of an axon growth cone, where the migration is directed to a specific target site by a combination of attractive and repulsive cues.

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axon extension involved in axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alcam activated leukocyte cell adhesion molecule ISS GO_REF:0000024 UniProt GO_REF:0000024 NCBI chr11:50,780,735...50,985,083
Ensembl chr11:50,781,127...50,985,083 		JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:5437554|PMID:22790009) RGD PMID:22790009 MGI:5437554 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858 		JBrowse link
G Nrp2 neuropilin 2 ISO (MGI:5437554|PMID:22790009) RGD PMID:22790009 MGI:5437554 NCBI chr 9:69,496,875...69,609,802
Ensembl chr 9:69,497,121...69,612,087 		JBrowse link
G Sema3a semaphorin 3A ISO (MGI:5437554|PMID:22790009) RGD PMID:22790009 MGI:5437554 NCBI chr 4:18,170,375...18,545,190
Ensembl chr 4:18,178,656...18,396,035 		JBrowse link
G Sema3f semaphorin 3F ISO (MGI:5437554|PMID:22790009) RGD PMID:22790009 MGI:5437554 NCBI chr 8:116,439,996...116,469,915
Ensembl chr 8:116,437,696...116,469,915 		JBrowse link
G Slit1 slit guidance ligand 1 IEA
ISO		 GO_REF:0000107
(PMID:16840550)		 Ensembl
RGD		 PMID:16840550 GO_REF:0000107 NCBI chr 1:260,843,481...260,992,366
Ensembl chr 1:260,843,483...260,992,366 		JBrowse link
G Slit2 slit guidance ligand 2 ISO (PMID:16840550) RGD PMID:16840550 NCBI chr14:66,831,848...67,171,491
Ensembl chr14:66,831,848...67,170,361 		JBrowse link
G Slit3 slit guidance ligand 3 IEA
ISO		 GO_REF:0000107
(PMID:16840550)		 Ensembl
RGD		 PMID:16840550 GO_REF:0000107 NCBI chr10:19,924,200...20,517,918
Ensembl chr10:20,320,878...20,518,518 		JBrowse link
G Smo smoothened, frizzled class receptor IMP RGD PMID:19447091 RGD:2324988 NCBI chr 4:57,019,941...57,041,779
Ensembl chr 4:57,019,941...57,042,770 		JBrowse link
negative regulation of axon extension involved in axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hdac6 histone deacetylase 6 IMP RGD PMID:19884510 RGD:9681717 NCBI chr  X:15,295,372...15,316,673
Ensembl chr  X:15,295,473...15,316,671 		JBrowse link
G Nrp1 neuropilin 1 IMP
ISO		 (MGI:1289520|PMID:9753685) RGD PMID:9753685, PMID:9288754 MGI:1289520, RGD:633436 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858 		JBrowse link
G Plxna3 plexin A3 ISO MGI:107558|MGI:1096347 (MGI:2152659|PMID:11683995) RGD PMID:11683995 MGI:2152659 NCBI chr  X:156,363,400...156,379,433
Ensembl chr  X:156,363,405...156,379,189 		JBrowse link
G Ryk receptor-like tyrosine kinase ISO MGI:98958 (MGI:3625635|PMID:16723543) RGD PMID:16723543 MGI:3625635 NCBI chr 8:111,326,339...111,398,640
Ensembl chr 8:111,326,433...111,397,867 		JBrowse link
G Sema3a semaphorin 3A ISO
IBA		 MGI:104518|MGI:107683|MGI:96721 (MGI:1289520|PMID:9753685), (MGI:2152659|PMID:11683995), (MGI:3801368|PMID:18550718), (MGI:73216|PMID:7748561)
PMID:21873635		 RGD PMID:7748561 PMID:9753685 PMID:11683995 PMID:18550718, PMID:21873635 MGI:1289520 MGI:2152659 MGI:3801368 MGI:73216, RGD:13792537 NCBI chr 4:18,170,375...18,545,190
Ensembl chr 4:18,178,656...18,396,035 		JBrowse link
G Sema3b semaphorin 3B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:116,353,791...116,362,655
Ensembl chr 8:116,354,073...116,361,343 		JBrowse link
G Sema3c semaphorin 3C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:14,318,276...14,490,438
Ensembl chr 4:14,318,274...14,490,446 		JBrowse link
G Sema3d semaphorin 3D IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:19,224,378...19,413,519
Ensembl chr 4:19,224,310...19,413,484 		JBrowse link
G Sema3e semaphorin 3E IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:17,314,745...17,594,659
Ensembl chr 4:17,272,511...17,594,598 		JBrowse link
G Sema3f semaphorin 3F ISO
IBA		 MGI:107683 (MGI:1289520|PMID:9753685), (MGI:2152659|PMID:11683995)
PMID:21873635		 RGD PMID:9753685 PMID:11683995, PMID:21873635 MGI:1289520 MGI:2152659, RGD:13792537 NCBI chr 8:116,439,996...116,469,915
Ensembl chr 8:116,437,696...116,469,915 		JBrowse link
G Sema3g semaphorin 3G IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr16:7,303,582...7,315,214
Ensembl chr16:7,303,578...7,315,390 		JBrowse link
G Sema4a semaphorin 4A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:187,799,568...187,823,014
Ensembl chr 2:187,799,568...187,822,997 		JBrowse link
G Sema4b semaphorin 4B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:141,986,145...142,014,400
Ensembl chr 1:141,986,145...142,014,398 		JBrowse link
G Sema4c semaphorin 4C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:43,129,413...43,140,442
Ensembl chr 9:43,129,415...43,139,870 		JBrowse link
G Sema4d semaphorin 4D IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr17:13,516,276...13,538,513
Ensembl chr17:13,488,376...13,553,974 		JBrowse link
G Sema4f ssemaphorin 4F IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 4:113,738,225...113,764,532
Ensembl chr 4:113,738,226...113,764,532 		JBrowse link
G Sema4g semaphorin 4G IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 1:264,738,935...264,753,399
Ensembl chr 1:264,741,911...264,753,397 		JBrowse link
G Sema5a semaphorin 5A IMP
IBA		 PMID:15603739
PMID:21873635		 UniProt
GO_Central		 PMID:15603739, PMID:21873635 RGD:8553809, RGD:13792537 NCBI chr 2:85,377,318...85,808,970
Ensembl chr 2:85,377,318...85,808,970 		JBrowse link
G Sema5b semaphorin 5B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr11:68,304,844...68,435,109
Ensembl chr11:68,306,659...68,349,238 		JBrowse link
G Sema6a semaphorin 6A IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr18:41,330,519...41,451,813
Ensembl chr18:41,333,551...41,389,510 		JBrowse link
G Sema6b semaphorin 6B IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 9:10,934,273...10,951,252
Ensembl chr 9:10,941,613...10,951,252 		JBrowse link
G Sema6c semaphorin 6C IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 2:196,330,777...196,347,218
Ensembl chr 2:196,334,626...196,344,008 		JBrowse link
G Sema6d semaphorin 6D IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 3:116,899,906...116,958,059
Ensembl chr 3:116,899,878...116,958,050 		JBrowse link
G Sema7a semaphorin 7A (John Milton Hagen blood group) IBA PMID:21873635 GO_Central PMID:21873635 RGD:13792537 NCBI chr 8:62,723,788...62,746,530
Ensembl chr 8:62,723,788...62,745,868 		JBrowse link
G Slit1 slit guidance ligand 1 IDA RGD PMID:15632296 RGD:1358459 NCBI chr 1:260,843,481...260,992,366
Ensembl chr 1:260,843,483...260,992,366 		JBrowse link
G Wnt3 Wnt family member 3 ISO (MGI:3806438|PMID:18716223) RGD PMID:18716223 MGI:3806438 NCBI chr10:91,830,709...91,874,907
Ensembl chr10:91,830,654...91,874,793 		JBrowse link
G Wnt3a Wnt family member 3A ISO (MGI:3806438|PMID:18716223) RGD PMID:18716223 MGI:3806438 NCBI chr10:45,598,898...45,643,151
Ensembl chr10:45,598,912...45,638,035 		JBrowse link
G Wnt5a Wnt family member 5A IEA
ISO		 GO_REF:0000107
MGI:101766 (MGI:3625635|PMID:16723543)		 Ensembl
RGD		 PMID:16723543 GO_REF:0000107 MGI:3625635 NCBI chr16:4,469,451...4,490,271
Ensembl chr16:4,469,468...4,489,860 		JBrowse link
positive regulation of axon extension involved in axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmpr2 bone morphogenetic protein receptor type 2 ISO UniProtKB:O35607 (MGI:5551355|PMID:24052814) RGD PMID:24052814 MGI:5551355 NCBI chr 9:66,568,074...66,683,019
Ensembl chr 9:66,568,074...66,676,494 		JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 IMP RGD PMID:18701697 RGD:2306571 NCBI chr 4:149,261,044...149,273,891
Ensembl chr 4:149,261,044...149,273,891 		JBrowse link
G Dscam DS cell adhesion molecule IMP
ISO
IEA		 PMID:18585357
(MGI:3829111|PMID:18585357)
(PMID:18585357)
GO_REF:0000107		 RGD
Ensembl		 PMID:18585357, PMID:18585357 GO_REF:0000107 MGI:3829111, RGD:8553710 NCBI chr11:37,004,776...37,599,866
Ensembl chr11:37,004,902...37,253,776 		JBrowse link
G Megf8 multiple EGF-like-domains 8 IEA
ISO
ISS		 GO_REF:0000107
(MGI:5551355|PMID:24052814)
GO_REF:0000024		 Ensembl
RGD
UniProt		 PMID:24052814 GO_REF:0000024 GO_REF:0000107 MGI:5551355 NCBI chr 1:82,184,671...82,234,045
Ensembl chr 1:82,185,034...82,234,045 		JBrowse link
G Nrp1 neuropilin 1 ISO (MGI:5141569|PMID:21658587) RGD PMID:21658587 MGI:5141569 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858 		JBrowse link
G Sema5a semaphorin 5A IMP PMID:15603739 UniProt PMID:15603739 RGD:8553809 NCBI chr 2:85,377,318...85,808,970
Ensembl chr 2:85,377,318...85,808,970 		JBrowse link
G Vegfa vascular endothelial growth factor A NOT ISO (MGI:5141569|PMID:21658587) RGD PMID:21658587 MGI:5141569 NCBI chr 9:17,340,341...17,355,681
Ensembl chr 9:17,340,341...17,355,681 		JBrowse link
regulation of axon extension involved in axon guidance term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nrp1 neuropilin 1 ISO (MGI:3578029|PMID:15814794) RGD PMID:15814794 MGI:3578029 NCBI chr19:61,332,351...61,486,166
Ensembl chr19:61,332,351...61,485,858 		JBrowse link
G Plxna4 plexin A4 ISO MGI:3578655 (MGI:3578029|PMID:15814794) RGD PMID:15814794 MGI:3578029 NCBI chr 4:59,439,489...59,883,637
Ensembl chr 4:59,445,767...59,809,321 		JBrowse link
G Sema3a semaphorin 3A ISO (PMID:18053124)
(MGI:4441128|PMID:15155748)		 RGD PMID:15155748 PMID:18053124 MGI:4441128 NCBI chr 4:18,170,375...18,545,190
Ensembl chr 4:18,178,656...18,396,035 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20045
    cellular process 18859
      movement of cell or subcellular component 2179
        neuron projection guidance 256
          neuron projection extension involved in neuron projection guidance 39
            axon extension involved in axon guidance 39
              negative regulation of axon extension involved in axon guidance 28
              positive regulation of axon extension involved in axon guidance 7
              regulation of axon extension involved in axon guidance + 34
Path 2
Term Annotations click to browse term
  biological_process 20045
    developmental process 6824
      anatomical structure development 6290
        multicellular organism development 5766
          system development 5298
            nervous system development 2729
              neurogenesis 1941
                generation of neurons 1785
                  neuron differentiation 1620
                    neuron development 1329
                      neuron projection development 1168
                        neuron projection morphogenesis 722
                          axonogenesis 494
                            axon guidance 255
                              axon extension involved in axon guidance 39
                                negative regulation of axon extension involved in axon guidance 28
                                positive regulation of axon extension involved in axon guidance 7
                                regulation of axon extension involved in axon guidance + 34
paths to the root