Bbaa5_m QTL Report (Mus musculus) - Rat Genome Database

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QTL Registration

QTL: Bbaa5_m (B.burgdorferi-associated arthritis 5 (mouse)) Mus musculus

Symbol: Bbaa5_m
Name: B.burgdorferi-associated arthritis 5 (mouse)
RGD ID: 1301518
Trait: Not determined
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm39698,483,798 - 145,881,170MOUSEQTLGRCm39
GRCm38698,506,837 - 145,935,444MOUSEQTLGRCm38
MGSCv376121,924,847 - 149,515,484 (+)MOUSEQTLGRCm37
MGSCv36125,082,738 - 151,104,725RGD
cM Map669.36MOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Bbaa5_mMousehematopoietic system phenotype  IEA 704405Created by mouse qtl pipelineMGIPMID:9916719
Bbaa5_mMouseimmune system phenotype  IEA 704405Created by mouse qtl pipelineMGIPMID:9916719
Bbaa5_mMouseincreased IgM level  IAGP 5509061 MGIPMID:9916719

#
Reference Title
Reference Citation
1. Mouse Genome Database (MGD) Mouse Genome Database (MGD)
2. Mouse MP Annotation Import Pipeline RGD automated import pipeline
PMID:9916719  



1 to 20 of 1743 rows
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD ID
Symbol
Name
Chr
Start
Stop
Species
401706587LOC131372252STARR-seq mESC enhancer starr_1681269848351798487475Mouse
9636380Gm32705predicted gene, 3270569848483498487352Mouse
9618227Gm32783predicted gene, 3278369849460198498902Mouse
16134254930595L18RikRIKEN cDNA 4930595L18 gene69850834298529065Mouse
401707164LOC131372253STARR-seq mESC enhancer starr_1681569864716198649143Mouse
401709330LOC131372254STARR-seq mESC enhancer starr_1681669870861598710220Mouse
9598968Gm32308predicted gene, 3230869873228598734994Mouse
401700571LOC131372255STARR-seq mESC enhancer starr_1681769880079298802345Mouse
1318577Foxp1forkhead box P169890230399510587Mouse
401832278LOC132411563STARR-positive B cell enhancer mm9_chr6:98942692-9894299269896965998969959Mouse
401841336LOC132411564STARR-positive B cell enhancer mm9_chr6:98957529-9895783069898449698984797Mouse
401838233LOC132411565STARR-positive B cell enhancer ABC_E219669900373799004038Mouse
401836362LOC132411566STARR-positive B cell enhancer mm9_chr6:99007212-9900751369903417999034480Mouse
163696388LOC128925509CapStarr-seq enhancer MGSCv37_chr6:99046157-9904634069907312499073307Mouse
11081912Gm19665predicted gene, 1966569907463099085277Mouse
10012925Gm38865predicted gene, 3886569909160599135563Mouse
15022070Mir12201microRNA 1220169916192399161980Mouse
401840793LOC132411567STARR-positive B cell enhancer mm9_chr6:99138580-9913888069916554799165847Mouse
15018152Gm52870predicted gene, 5287069918141399211755Mouse
401710460LOC131372256STARR-seq mESC enhancer starr_1682469921644799219104Mouse

1 to 20 of 1743 rows
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Expected Size
Chr
Start
Stop
Species
Match

1 to 10 of 101 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
11252138Clas1_mcarcinogen-induced lung adenoma susceptibility 1 (mouse)6112246918146954059Mouse
1301521Pas1c_mpulmonary adenoma susceptibility 1c (mouse)Not determined671958006105958152Mouse
4141617Ncilt_mnuclear cytoplasmic invaginations in lung tumors (mouse)Not determined145162425145195965Mouse
4141611Btts_mbitterness tasting (mouse)Not determined6125333609134096586Mouse
1301509Sluc3_msusceptibility to lung cancer 3 (mouse)Not determined6104480321127019938Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined688982366122982564Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698483798145881170Mouse
1301813Skl3_mskeletal size (tail length) 3 (mouse)Not determined670402880104403016Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676440930110441074Mouse
10412215Cmv3_mcytomegalovirus resistance 3 (mouse)Not determined6128811857137416927Mouse

1 to 10 of 101 rows


Database
Acc Id
Source(s)
MGD MGI:2149354

Note Type Note Reference