Lpcat3 (lysophosphatidylcholine acyltransferase 3) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Lpcat3 (lysophosphatidylcholine acyltransferase 3) Mus musculus
Analyze
Symbol: Lpcat3
Name: lysophosphatidylcholine acyltransferase 3
RGD ID: 1321001
MGI Page MGI
Description: Exhibits 1-acylglycerophosphocholine O-acyltransferase activity; 1-acylglycerophosphoethanolamine O-acyltransferase activity; and 1-acylglycerophosphoserine O-acyltransferase activity. Involved in several processes, including glycerophospholipid metabolic process; plasma lipoprotein particle assembly; and positive regulation of lipid transport. Localizes to endoplasmic reticulum membrane. Is expressed in several structures, including alimentary system; central nervous system; endocrine gland; hemolymphoid system; and liver. Orthologous to human LPCAT3 (lysophosphatidylcholine acyltransferase 3); PARTICIPATES IN glycerophospholipid metabolic pathway; INTERACTS WITH 1,2-dichloroethane; 2,3',4,4',5-Pentachlorobiphenyl; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 1-acylglycerophosphoserine O-acyltransferase; C3f; Grcc3; Grcc3f; LPC acyltransferase 3; Lpcat; Lpeat; Lplat5; Lpsat; lyso-PC acyltransferase 3; lyso-PE acyltransferase; lyso-PS acyltransferase; lysophosphatidylethanolamine acyltransferase; lysophosphatidylserine acyltransferase; lysophospholipid acyltransferase 5; Mboa; Mboat5; Moact5; O-acyltransferase domain-containing protein 5; Oac; Oact5; PTG
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396124,639,762 - 124,681,679 (+)NCBIGRCm39mm39
GRCm39 Ensembl6124,639,990 - 124,681,381 (+)Ensembl
GRCm386124,663,094 - 124,704,716 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6124,663,027 - 124,704,418 (+)EnsemblGRCm38mm10GRCm38
MGSCv376124,613,122 - 124,654,734 (+)NCBIGRCm37mm9NCBIm37
MGSCv366124,628,747 - 124,669,798 (+)NCBImm8
Celera6126,344,780 - 126,386,441 (+)NCBICelera
Cytogenetic Map6F2NCBI
cM Map659.17NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:9445485   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14610273   PMID:14681479   PMID:14691545   PMID:15489334  
PMID:15782199   PMID:16141072   PMID:16141073   PMID:17967808   PMID:18287005   PMID:18799693   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22511767   PMID:23208369   PMID:23332760  
PMID:23580142   PMID:24206663   PMID:25806685   PMID:25898003   PMID:26226572   PMID:26828064   PMID:26833026   PMID:27113764   PMID:27913621   PMID:28167773   PMID:28378742   PMID:28683445  
PMID:28846071   PMID:29395055   PMID:29673706   PMID:29866392   PMID:30160786   PMID:30550785   PMID:30590048   PMID:30705887   PMID:31356236   PMID:32364701   PMID:32780898  


Genomics

Comparative Map Data
Lpcat3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396124,639,762 - 124,681,679 (+)NCBIGRCm39mm39
GRCm39 Ensembl6124,639,990 - 124,681,381 (+)Ensembl
GRCm386124,663,094 - 124,704,716 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6124,663,027 - 124,704,418 (+)EnsemblGRCm38mm10GRCm38
MGSCv376124,613,122 - 124,654,734 (+)NCBIGRCm37mm9NCBIm37
MGSCv366124,628,747 - 124,669,798 (+)NCBImm8
Celera6126,344,780 - 126,386,441 (+)NCBICelera
Cytogenetic Map6F2NCBI
cM Map659.17NCBI
LPCAT3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl126,976,185 - 7,018,477 (-)EnsemblGRCh38hg38GRCh38
GRCh38126,976,185 - 7,018,508 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37127,085,347 - 7,125,780 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36126,955,608 - 6,996,103 (-)NCBINCBI36hg18NCBI36
Celera128,706,367 - 8,748,731 (-)NCBI
Cytogenetic Map12p13.31NCBI
HuRef126,943,813 - 6,986,151 (-)NCBIHuRef
CHM1_1127,084,301 - 7,124,856 (-)NCBICHM1_1
Lpcat3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24157,468,397 - 157,509,889 (+)NCBI
Rnor_6.0 Ensembl4157,181,795 - 157,222,996 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04157,181,722 - 157,222,997 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04224,199,925 - 224,240,593 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44160,786,349 - 160,827,556 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14161,031,284 - 161,072,491 (+)NCBI
Celera4146,207,013 - 146,248,552 (+)NCBICelera
Cytogenetic Map4q42NCBI
Lpcat3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554134,571,028 - 4,605,097 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554134,571,028 - 4,605,097 (-)NCBIChiLan1.0ChiLan1.0
LPCAT3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1127,024,015 - 7,065,945 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl127,024,015 - 7,065,945 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0127,107,925 - 7,149,982 (-)NCBIMhudiblu_PPA_v0panPan3
LPCAT3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12738,028,438 - 38,068,854 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2738,028,120 - 38,068,502 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha278,547,836 - 8,588,333 (-)NCBI
ROS_Cfam_1.02738,380,888 - 38,421,451 (+)NCBI
UMICH_Zoey_3.12738,255,853 - 38,296,355 (+)NCBI
UNSW_CanFamBas_1.02738,296,886 - 38,337,321 (+)NCBI
UU_Cfam_GSD_1.0278,026,597 - 8,067,116 (-)NCBI
Lpcat3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404945102,132,454 - 102,185,140 (+)NCBI
SpeTri2.0NW_004936709800,197 - 852,659 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
LPCAT3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl563,708,010 - 63,756,476 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1563,707,674 - 63,746,369 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2566,143,944 - 66,182,458 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LPCAT3
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1117,009,911 - 7,051,391 (-)NCBI
ChlSab1.1 Ensembl117,005,701 - 7,051,605 (-)Ensembl
Lpcat3
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248603,611,300 - 3,642,682 (-)NCBI

Position Markers
RH125006  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386124,668,717 - 124,668,940UniSTSGRCm38
MGSCv376124,618,735 - 124,618,958UniSTSGRCm37
Celera6126,350,448 - 126,350,671UniSTS
Cytogenetic Map6F2UniSTS
cM Map660.23UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690795610124795846Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692607306146429238Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined695004651129004738Mouse
1300704Cia3_mcollagen induced arthritis QTL 3 (mouse)Not determined696347325130347522Mouse
11040599Lmr4b_mleishmaniasis resistance 4b (mouse)696347325130347522Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96655951146633626Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96655951146633626Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696655951146633626Mouse
10043923Bhr7_mbronchial hyperresponsiveness 7 (mouse)Not determined698242853132242977Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698506837145935444Mouse
1301923Lith6_mlithogenic gene 6 (mouse)Not determined698717516132717715Mouse
1301915Chab3_mcholesterol absorption 3 (mouse)Not determined698931748132940036Mouse
1302131Bmd8_mbone mineral density 8 (mouse)Not determined699155128133155267Mouse
1300887Pabr1_mplasma apolipoprotein B (human) regulator 1 (mouse)Not determined6103777444136423692Mouse
1301509Sluc3_msusceptibility to lung cancer 3 (mouse)Not determined6104503360127042975Mouse
1357806Aaj3_manxiety in A/J 3 (mouse)Not determined6104503360136423692Mouse
10412207Cypr5_mcytokine production 5 (mouse)Not determined6110838217144838360Mouse
13463481Mcvq14_mmean corpuscular volume QTL 14 (mouse)6111165485145165578Mouse
10043891Tilss4_mTNF-induced lethal shock susceptibility 3 (mouse)Not determined6112269957125356785Mouse
11252138Clas1_mcarcinogen-induced lung adenoma susceptibility 1 (mouse)6112269957147052561Mouse
4140980Mvwf2_mmodifier of von Willebrand factor 2 (mouse)Not determined114368732145656013Mouse
1301658Radpf3_mradiation pulmonary fibrosis 3 (mouse)Not determined6115242853146429238Mouse
4141194Cyx_mcycloheximide tasting (mouse)Not determined115569842149572401Mouse
4141889Qui_mquinine sensitivity, taste (mouse)Not determined115569842149572401Mouse
4141295Rua_mraffinose acetate tasting (mouse)Not determined115569842149572401Mouse
1301927Etohcta6_methanol conditioned taste aversion 6 (mouse)Not determined6115601042149601187Mouse
1301083Bhr5_mbronchial hyperresponsiveness 5 (mouse)Not determined6115717516132601187Mouse
4141064Ath37_matherosclerosis 37 (mouse)Not determined6116664897128519025Mouse
4142079Skmw15_mskeletal muscle weight 15 (mouse)Not determined6116852888149736546Mouse
1301152Athsq2_matherosclerosis susceptibility QTL 2 (mouse)Not determined6117082986149736546Mouse
1301804Bulb2_mbulb size 2 (mouse)Not determined6120439808149736546Mouse
10449436Pas17_mpulmonary adenoma susceptibility 17 (mouse)6124357314145656013Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1959
Count of miRNA genes:656
Interacting mature miRNAs:829
Transcripts:ENSMUST00000004381, ENSMUST00000128721, ENSMUST00000130020, ENSMUST00000133797, ENSMUST00000135516, ENSMUST00000141069, ENSMUST00000141546, ENSMUST00000150597, ENSMUST00000152176
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_145130 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_149320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036165853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_377423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB294194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC002397 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC115911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC164157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK098090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169452 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK178301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK188090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK190594 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194975 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK203927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK204330 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK206831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK215690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY028317 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BB666850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN705185 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000004381   ⟹   ENSMUSP00000004381
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6124,663,027 - 124,704,418 (+)Ensembl
RefSeq Acc Id: ENSMUST00000128721   ⟹   ENSMUSP00000144738
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6124,663,172 - 124,702,290 (+)Ensembl
RefSeq Acc Id: ENSMUST00000130020
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6124,702,755 - 124,703,928 (+)Ensembl
RefSeq Acc Id: ENSMUST00000133797
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6124,663,215 - 124,700,560 (+)Ensembl
RefSeq Acc Id: ENSMUST00000135516
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6124,663,027 - 124,704,370 (+)Ensembl
RefSeq Acc Id: ENSMUST00000141069
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6124,663,181 - 124,699,501 (+)Ensembl
RefSeq Acc Id: ENSMUST00000141546
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6124,701,419 - 124,702,613 (+)Ensembl
RefSeq Acc Id: ENSMUST00000150597
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6124,703,005 - 124,704,017 (+)Ensembl
RefSeq Acc Id: ENSMUST00000152176
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6124,702,257 - 124,703,058 (+)Ensembl
RefSeq Acc Id: NM_145130   ⟹   NP_660112
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396124,640,067 - 124,681,679 (+)NCBI
GRCm386124,663,104 - 124,704,716 (+)NCBI
MGSCv376124,613,122 - 124,654,734 (+)RGD
Celera6126,344,780 - 126,386,441 (+)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_149320
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396124,640,067 - 124,681,679 (+)NCBI
GRCm386124,663,104 - 124,704,716 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036165852   ⟹   XP_036021745
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396124,640,056 - 124,681,142 (+)NCBI
RefSeq Acc Id: XM_036165853   ⟹   XP_036021746
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396124,639,887 - 124,681,142 (+)NCBI
RefSeq Acc Id: XR_377423
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396124,639,762 - 124,681,129 (+)NCBI
GRCm386124,663,094 - 124,704,165 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_660112   ⟸   NM_145130
- UniProtKB: Q91V01 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000144738   ⟸   ENSMUST00000128721
RefSeq Acc Id: ENSMUSP00000004381   ⟸   ENSMUST00000004381
RefSeq Acc Id: XP_036021746   ⟸   XM_036165853
- Peptide Label: isoform X1
RefSeq Acc Id: XP_036021745   ⟸   XM_036165852
- Peptide Label: isoform X1

Promoters
RGD ID:6839575
Promoter ID:MM_KWN:47548
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:OTTMUST00000057553,   OTTMUST00000057554,   OTTMUST00000057555,   OTTMUST00000057556,   OTTMUST00000057557
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366124,612,386 - 124,613,317 (+)MPROMDB
RGD ID:6839576
Promoter ID:MM_KWN:47549
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   MEF_B6,   Spleen
Transcripts:OTTMUST00000057558
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366124,650,466 - 124,651,592 (+)MPROMDB
RGD ID:6839577
Promoter ID:MM_KWN:47550
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000057559,   OTTMUST00000057560,   OTTMUST00000057561
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366124,651,386 - 124,653,347 (+)MPROMDB
RGD ID:6890968
Promoter ID:EPDNEW_M8935
Type:initiation region
Name:Lpcat3_1
Description:Mus musculus lysophosphatidylcholine acyltransferase 3 , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm386124,663,128 - 124,663,188EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1315211 AgrOrtholog
Ensembl Genes ENSMUSG00000004270 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000004381 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000144738 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000004381 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000128721 UniProtKB/TrEMBL
InterPro MBOAT_fam UniProtKB/Swiss-Prot
KEGG Report mmu:14792 UniProtKB/Swiss-Prot
MGD MGI:1315211 ENTREZGENE
NCBI Gene 14792 ENTREZGENE
Pfam MBOAT UniProtKB/Swiss-Prot
PhenoGen Lpcat3 PhenoGen
UniProt A0A0N4SUM3_MOUSE UniProtKB/TrEMBL
  MBOA5_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary B1B362 UniProtKB/Swiss-Prot
  O35131 UniProtKB/Swiss-Prot
  Q8BNH6 UniProtKB/Swiss-Prot