Hcga4c_m QTL Report (Mus musculus) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

QTL: Hcga4c_m (home cage activity 4c (mouse)) Mus musculus

Symbol: Hcga4c_m
Name: home cage activity 4c (mouse)
RGD ID: 12910774
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386110,959,922 - 112,581,887MOUSEQTLGRCm38
cM Map6syntenicMOUSEQTL
Cross Type: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



References

References - curated
1. Mouse Genome Database (MGD)
Additional References at PubMed
PMID:24781804  


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1319044Lmcd1LIM and cysteine-rich domains 16112273758112330423Mouse
11041Oxtroxytocin receptor6112473683112491035Mouse
735906Cav3caveolin 36112459505112472872Mouse
1557646Ssu2ssu-2 homolog (C. elegans)6112359322112388199Mouse
1557347Grm7glutamate receptor, metabotropic 76110645349111567230Mouse
16088441700054K19RikRIKEN cDNA 1700054K19 gene6112210708112212519Mouse
2299022Gm15519predicted gene 155196112563582112566310Mouse
56864635031434C07RikRIKEN cDNA 5031434C07 gene6112286794112290319Mouse
9594660Gm35649predicted gene, 356496112462668112463624Mouse
9656456Gm35706predicted gene, 357066112541763112546264Mouse
10035473Gm40395predicted gene, 403956112422733112424511Mouse
10036298Gm38873predicted gene, 388736112390396112398174Mouse
11576483Gm44336predicted gene, 443366112393347112393851Mouse

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
4928276D6Mit1041446110959922110960065Mouseregion
5494477RH4475815636111081535111083097Mouseregion
491613742.MHAa96d6.seq1536111227818111227971Mouseregion
4928280D6Mit1081276111324400111324526Mouseregion
4967887px-35d41816111379086111379268Mouseregion
5005255GRM7_13887696111566440111567208Mouseregion
4908281BB1766771296111567014111567142Mouseregion
5009263D6Mit3431396111612087111612225Mouseregion
4928645D6Mit287886112004651112004738Mouseregion
491342511.MMHAP90FRD8.seq1246112026777112026900Mouseregion
4928855D6Mit3891426112094529112094670Mouseregion
4928883D6Mit541856112269957112270141Mouseregion
4946759UniSTS:2355171166112315628112315743Mouseregion
4951709AI0712302006112330150112330349Mouseregion
4903919AW4555001186112330220112330337Mouseregion
4933140AI385751976112472525112472621Mouseregion
4946761UniSTS:235518926112472606112472697Mouseregion
5495600UniSTS:48496512006112488598112489797Mouseregion
5005747PMC170950P13906112489110112489499Mouseregion
4911010Oxtr6626112489114112489775Mouseregion
4983590PMC316374P34796112490781112491259Mouseregion
4928282D6Mit1071496112533607112533755Mouseregion
4946767UniSTS:2355192096112563617112563825Mouseregion
4928525D6Mit231386112581750112581887Mouseregion

QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684122513118122513Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686806805113544602Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687503360121503555Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined689005405123005603Mouse
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690795610124795846Mouse
4141578Obrq1_mobesity resistance QTL 1 (mouse)Not determined92607306112004738Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692607306146429238Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined695004651129004738Mouse
1300704Cia3_mcollagen induced arthritis QTL 3 (mouse)Not determined696347325130347522Mouse
11040599Lmr4b_mleishmaniasis resistance 4b (mouse)696347325130347522Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96655951146633626Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96655951146633626Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696655951146633626Mouse
10043923Bhr7_mbronchial hyperresponsiveness 7 (mouse)Not determined698242853132242977Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698506837145935444Mouse
1301923Lith6_mlithogenic gene 6 (mouse)Not determined698717516132717715Mouse
1301915Chab3_mcholesterol absorption 3 (mouse)Not determined698931748132940036Mouse
1302131Bmd8_mbone mineral density 8 (mouse)Not determined699155128133155267Mouse
1300887Pabr1_mplasma apolipoprotein B (human) regulator 1 (mouse)Not determined6103777444136423692Mouse
12910776Hcga4b_mhome cage activity 4b (mouse)6104503360110960065Mouse
1301509Sluc3_msusceptibility to lung cancer 3 (mouse)Not determined6104503360127042975Mouse
1357806Aaj3_manxiety in A/J 3 (mouse)Not determined6104503360136423692Mouse
1357793Pnhdlc1_mplasma non-HDL cholesterol 1 (mouse)Not determined6105564822114368849Mouse
4141699Ibdq2_minflammatory bowel disease QTL 2 (mouse)Not determined106005405120917141Mouse
10412207Cypr5_mcytokine production 5 (mouse)Not determined6110838217144838360Mouse
12910774Hcga4c_mhome cage activity 4c (mouse)6110959922112581887Mouse
13463481Mcvq14_mmean corpuscular volume QTL 14 (mouse)6111165485145165578Mouse
10043891Tilss4_mTNF-induced lethal shock susceptibility 3 (mouse)Not determined6112269957125356785Mouse
11252138Clas1_mcarcinogen-induced lung adenoma susceptibility 1 (mouse)6112269957147052561Mouse


Additional Information

Database Acc Id Source(s)
MGD MGI:5902025 MouseQtl