C2cd5 (C2 calcium-dependent domain containing 5) - Rat Genome Database

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Gene: C2cd5 (C2 calcium-dependent domain containing 5) Mus musculus
Analyze
Symbol: C2cd5
Name: C2 calcium-dependent domain containing 5
RGD ID: 1312121
MGI Page MGI
Description: Enables calcium ion binding activity. Involved in insulin receptor signaling pathway; positive regulation of glucose transmembrane transport; and positive regulation of vesicle fusion. Acts upstream of or within positive regulation of glucose import; protein localization to plasma membrane; and vesicle fusion. Located in plasma membrane. Orthologous to human C2CD5 (C2 calcium dependent domain containing 5).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 138 kDa C2 domain-containing phosphoprotein; 5730419I09Rik; C030008B15Rik; C2 domain-containing protein 5; CDP13; CDP138; hypothetical protein LOC74741; Kiaa0528; uncharacterized protein KIAA0528
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396142,956,646 - 143,045,878 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6142,956,646 - 143,045,867 (-)EnsemblGRCm39 Ensembl
GRCm386143,010,920 - 143,100,155 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6143,010,920 - 143,100,141 (-)EnsemblGRCm38mm10GRCm38
MGSCv376142,959,440 - 143,048,627 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366142,968,151 - 143,069,912 (-)NCBIMGSCv36mm8
Celera6146,066,244 - 146,155,543 (-)NCBICelera
Cytogenetic Map6G3NCBI
cM Map675.13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10725249   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11544199   PMID:12477932   PMID:12520002   PMID:14610273   PMID:15368895   PMID:15489334  
PMID:15572359   PMID:16141072   PMID:16141073   PMID:16919269   PMID:17114649   PMID:17967808   PMID:18799693   PMID:21267068   PMID:21873635   PMID:21907141   PMID:21907143   PMID:29378832  
PMID:31666192   PMID:32325033  


Genomics

Comparative Map Data
C2cd5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396142,956,646 - 143,045,878 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6142,956,646 - 143,045,867 (-)EnsemblGRCm39 Ensembl
GRCm386143,010,920 - 143,100,155 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6143,010,920 - 143,100,141 (-)EnsemblGRCm38mm10GRCm38
MGSCv376142,959,440 - 143,048,627 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366142,968,151 - 143,069,912 (-)NCBIMGSCv36mm8
Celera6146,066,244 - 146,155,543 (-)NCBICelera
Cytogenetic Map6G3NCBI
cM Map675.13NCBI
C2CD5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381222,448,583 - 22,544,542 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1222,448,583 - 22,544,546 (-)EnsemblGRCh38hg38GRCh38
GRCh371222,601,517 - 22,697,476 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361222,492,784 - 22,588,719 (-)NCBINCBI36Build 36hg18NCBI36
Build 341222,492,786 - 22,588,719NCBI
Celera1227,749,342 - 27,845,274 (-)NCBICelera
Cytogenetic Map12p12.1NCBI
HuRef1222,367,856 - 22,463,789 (-)NCBIHuRef
CHM1_11222,566,581 - 22,662,495 (-)NCBICHM1_1
T2T-CHM13v2.01222,320,046 - 22,416,003 (-)NCBIT2T-CHM13v2.0
C2cd5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr84177,700,515 - 177,790,576 (-)NCBIGRCr8
mRatBN7.24175,969,544 - 176,055,597 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl4175,969,545 - 176,055,558 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx4182,264,524 - 182,350,615 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.04178,048,794 - 178,134,888 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.04176,669,376 - 176,755,467 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.04177,245,868 - 177,331,910 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl4177,245,868 - 177,331,915 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04241,450,858 - 241,536,434 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44180,903,353 - 180,989,193 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.14181,149,267 - 181,234,270 (-)NCBI
Celera4164,500,350 - 164,586,357 (-)NCBICelera
Cytogenetic Map4q44NCBI
C2cd5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541317,884,556 - 17,972,851 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541317,883,411 - 17,972,865 (-)NCBIChiLan1.0ChiLan1.0
C2CD5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21074,271,825 - 74,369,730 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11274,268,239 - 74,366,135 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01263,769,552 - 63,865,681 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11266,377,634 - 66,472,883 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1266,377,634 - 66,472,877 (+)Ensemblpanpan1.1panPan2
C2CD5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12724,697,036 - 24,798,138 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2724,697,016 - 24,797,543 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2721,564,193 - 21,665,404 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02724,907,508 - 25,008,844 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2724,907,536 - 25,008,968 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12724,712,280 - 24,813,433 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02724,736,875 - 24,838,054 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02721,733,960 - 21,835,265 (-)NCBIUU_Cfam_GSD_1.0
C2cd5
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494586,554,495 - 86,649,759 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365484,477,313 - 4,572,670 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365484,477,336 - 4,572,645 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
C2CD5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl551,040,514 - 51,132,288 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1551,040,519 - 51,132,287 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
C2CD5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11122,267,508 - 22,362,927 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1122,267,415 - 22,362,969 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606912,781,268 - 12,876,482 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
C2cd5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475216,261,775 - 16,365,320 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475216,261,819 - 16,365,161 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in C2cd5
3280 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1161
Count of miRNA genes:272
Interacting mature miRNAs:314
Transcripts:ENSMUST00000087485, ENSMUST00000111758, ENSMUST00000171349
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648696934148351498Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692584287146330736Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96632912146535124Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96632912146535124Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696632912146535124Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698483798145881170Mouse
10412207Cypr5_mcytokine production 5 (mouse)Not determined6110815180144815323Mouse
13463481Mcvq14_mmean corpuscular volume QTL 14 (mouse)6111142448145142541Mouse
11252138Clas1_mcarcinogen-induced lung adenoma susceptibility 1 (mouse)6112246918146954059Mouse
4140980Mvwf2_mmodifier of von Willebrand factor 2 (mouse)Not determined114345693145601739Mouse
1301658Radpf3_mradiation pulmonary fibrosis 3 (mouse)Not determined6115219814146330736Mouse
4141889Qui_mquinine sensitivity, taste (mouse)Not determined115546805149549364Mouse
4141194Cyx_mcycloheximide tasting (mouse)Not determined115546805149549364Mouse
4141295Rua_mraffinose acetate tasting (mouse)Not determined115546805149549364Mouse
1301927Etohcta6_methanol conditioned taste aversion 6 (mouse)Not determined6115578005149578150Mouse
4142079Skmw15_mskeletal muscle weight 15 (mouse)Not determined6116829851149588044Mouse
1301152Athsq2_matherosclerosis susceptibility QTL 2 (mouse)Not determined6117059949149588044Mouse
1301804Bulb2_mbulb size 2 (mouse)Not determined6120416806149588044Mouse
10449436Pas17_mpulmonary adenoma susceptibility 17 (mouse)6124334273145601739Mouse
1302089Wta2_mweight adult 2 (mouse)Not determined6125269523149588044Mouse
10449437Pas15_mpulmonary adenoma susceptibility 15 (mouse)6128180868149588044Mouse
10053680Lith25_mlithogenic gene 25 (mouse)Not determined6128601582149588044Mouse
1301027Hdlq12_mHDL QTL 12 (mouse)Not determined6128601582149588044Mouse
10766452Sle23_msystematic lupus erythematosus susceptibility 23 (mouse)6128601582149588044Mouse
1301084Bpq5_mblood pressure QTL 5 (mouse)Not determined6129330484149588044Mouse
4141974Skmw14_mskeletal muscle weight 14 (mouse)Not determined6129330484149588044Mouse
1301686Trmq1_mT cell ratio modifier QTL 1 (mouse)Not determined6129330484149588044Mouse
1301620Insq8_minsulin QTL 8 (mouse)Not determined6129534979149588044Mouse
1558959Eamcd2_mexperimental autoimmune myocarditis 2 (mouse)Not determined6129953954149588044Mouse
14746990Manh61_mmandible shape 61 (mouse)6130156355149588044Mouse
14746999Mancz6_mmandible centroid size 6 (mouse)6130156355149588044Mouse
12879916Shm5_msperm head morphology 5 (mouse)6132266532145601739Mouse
1301820Mop1_mmorphine preference 1 (mouse)Not determined6132578005146330736Mouse
15092053Wegrme2_mweek eight growth rate, maternal effect 2 (mouse)6140445726147201498Mouse
15092061Wfigrme1_mweek five growth rate, maternal effect 1 (mouse)6140445726147201498Mouse
15092045Wngrme2_mweek nine growth rate, maternal effect 2 (mouse)6140497205147252976Mouse
15092047Wsigrme2_mweek six growth rate, maternal effect 2 (mouse)6140497205147252976Mouse
15092052Wsegrme2_mweek seven growth rate, maternal effect 2 (mouse)6140497205147252976Mouse
15092056Mgrme1_mmid growth rate, maternal effect 1 (mouse)6140497205147252976Mouse
15092058Lgrme2_mlate growth rate, maternal effect 2 (mouse)6140497205147252976Mouse
15092060Wfogrme1_mweek four growth rate, maternal effect 1 (mouse)6140497205147252976Mouse
13524523Bodwtq5_mbody wweight QTL 5 (mouse)6142667206144497206Mouse

Markers in Region
BB234544  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386143,018,877 - 143,018,986UniSTSGRCm38
MGSCv376142,967,397 - 142,967,506UniSTSGRCm37
Celera6146,074,201 - 146,074,310UniSTS
Cytogenetic Map6G2UniSTS
Whitehead/MRC_RH61371.55UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001109688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001286578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362113 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362115 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001362118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_029081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_029897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006506997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006507009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321798 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321799 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321804 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321809 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030255649 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152378 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152379 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036152385 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001785180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001785182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004933627 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004933628 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC122797 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC127354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK021056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK029825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK141590 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK143732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AU022314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC027763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC049905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC053913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF916173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000087485   ⟹   ENSMUSP00000084758
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6142,956,646 - 143,045,833 (-)Ensembl
GRCm38.p6 Ensembl6143,010,920 - 143,100,107 (-)Ensembl
RefSeq Acc Id: ENSMUST00000111758   ⟹   ENSMUSP00000107388
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6142,956,654 - 143,045,502 (-)Ensembl
GRCm38.p6 Ensembl6143,010,928 - 143,099,776 (-)Ensembl
RefSeq Acc Id: ENSMUST00000171349   ⟹   ENSMUSP00000127834
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6142,956,646 - 143,045,833 (-)Ensembl
GRCm38.p6 Ensembl6143,010,920 - 143,100,107 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203187   ⟹   ENSMUSP00000145373
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6142,957,459 - 143,045,797 (-)Ensembl
GRCm38.p6 Ensembl6143,011,733 - 143,100,071 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203349
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6142,973,039 - 143,045,833 (-)Ensembl
GRCm38.p6 Ensembl6143,027,313 - 143,100,107 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203537
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6143,023,724 - 143,025,703 (-)Ensembl
GRCm38.p6 Ensembl6143,077,998 - 143,079,977 (-)Ensembl
RefSeq Acc Id: ENSMUST00000203673   ⟹   ENSMUSP00000145425
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6142,957,663 - 143,045,731 (-)Ensembl
GRCm38.p6 Ensembl6143,011,937 - 143,100,005 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204043   ⟹   ENSMUSP00000145382
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6142,987,176 - 143,012,811 (-)Ensembl
GRCm38.p6 Ensembl6143,041,450 - 143,067,085 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204140   ⟹   ENSMUSP00000145173
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6143,024,091 - 143,045,867 (-)Ensembl
GRCm38.p6 Ensembl6143,078,365 - 143,100,141 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204160
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6143,018,379 - 143,027,146 (-)Ensembl
GRCm38.p6 Ensembl6143,072,653 - 143,081,420 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204233
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6142,992,570 - 142,995,914 (-)Ensembl
GRCm38.p6 Ensembl6143,046,844 - 143,050,188 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204635
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6142,957,465 - 142,959,438 (-)Ensembl
GRCm38.p6 Ensembl6143,011,739 - 143,013,712 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204655   ⟹   ENSMUSP00000145019
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6142,957,208 - 143,045,493 (-)Ensembl
GRCm38.p6 Ensembl6143,011,482 - 143,099,767 (-)Ensembl
RefSeq Acc Id: ENSMUST00000204967
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6143,016,306 - 143,045,575 (-)Ensembl
GRCm38.p6 Ensembl6143,070,580 - 143,099,849 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205079
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6143,028,577 - 143,045,804 (-)Ensembl
GRCm38.p6 Ensembl6143,082,851 - 143,100,078 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205117
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6142,964,581 - 142,967,573 (-)Ensembl
GRCm38.p6 Ensembl6143,018,855 - 143,021,847 (-)Ensembl
RefSeq Acc Id: ENSMUST00000205119   ⟹   ENSMUSP00000145397
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6142,956,651 - 143,045,816 (-)Ensembl
GRCm38.p6 Ensembl6143,010,925 - 143,100,090 (-)Ensembl
RefSeq Acc Id: NM_001109688   ⟹   NP_001103158
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,646 - 143,045,878 (-)NCBI
GRCm386143,010,920 - 143,100,152 (-)NCBI
MGSCv376142,959,440 - 143,048,627 (-)RGD
Celera6146,066,244 - 146,155,588 (-)NCBI
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001286578   ⟹   NP_001273507
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,646 - 143,045,878 (-)NCBI
GRCm386143,010,920 - 143,100,152 (-)NCBI
Celera6146,066,244 - 146,155,588 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001362113   ⟹   NP_001349042
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,646 - 143,045,878 (-)NCBI
GRCm386143,010,920 - 143,100,152 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001362114   ⟹   NP_001349043
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,646 - 143,045,878 (-)NCBI
GRCm386143,010,920 - 143,100,152 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001362115   ⟹   NP_001349044
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,646 - 143,045,878 (-)NCBI
GRCm386143,010,920 - 143,100,152 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001362116   ⟹   NP_001349045
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,646 - 143,045,878 (-)NCBI
GRCm386143,010,920 - 143,100,152 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001362117   ⟹   NP_001349046
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,646 - 143,045,878 (-)NCBI
GRCm386143,010,920 - 143,100,152 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001362118   ⟹   NP_001349047
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,646 - 143,045,878 (-)NCBI
GRCm386143,010,920 - 143,100,152 (-)NCBI
Sequence:
RefSeq Acc Id: NM_029081   ⟹   NP_083357
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,646 - 143,045,878 (-)NCBI
GRCm386143,010,920 - 143,100,152 (-)NCBI
MGSCv376142,959,440 - 143,048,627 (-)RGD
Celera6146,066,244 - 146,155,588 (-)NCBI
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_029897   ⟹   NP_084173
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,646 - 143,045,878 (-)NCBI
GRCm386143,010,920 - 143,100,152 (-)NCBI
MGSCv376142,959,440 - 143,048,627 (-)RGD
Celera6146,066,244 - 146,155,588 (-)NCBI
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006506997   ⟹   XP_006507060
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
GRCm386143,010,927 - 143,100,153 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006507009   ⟹   XP_006507072
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,019,231 (-)NCBI
GRCm386143,010,927 - 143,073,504 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321797   ⟹   XP_017177286
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
GRCm386143,010,927 - 143,100,153 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321798   ⟹   XP_017177287
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
GRCm386143,010,927 - 143,100,153 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321799   ⟹   XP_017177288
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
GRCm386143,010,927 - 143,100,153 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321800   ⟹   XP_017177289
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
GRCm386143,010,927 - 143,100,153 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321801   ⟹   XP_017177290
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
GRCm386143,010,927 - 143,100,153 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321802   ⟹   XP_017177291
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
GRCm386143,010,927 - 143,100,153 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321804   ⟹   XP_017177293
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
GRCm386143,010,927 - 143,100,153 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321807   ⟹   XP_017177296
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
GRCm386143,010,927 - 143,100,153 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321809   ⟹   XP_017177298
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
GRCm386143,010,927 - 143,100,153 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017321813   ⟹   XP_017177302
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,019,227 (-)NCBI
GRCm386143,010,927 - 143,073,500 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030255649   ⟹   XP_030111509
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
GRCm386143,010,927 - 143,100,152 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152375   ⟹   XP_036008268
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152376   ⟹   XP_036008269
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152377   ⟹   XP_036008270
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152378   ⟹   XP_036008271
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152379   ⟹   XP_036008272
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152380   ⟹   XP_036008273
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152381   ⟹   XP_036008274
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,024,067 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152382   ⟹   XP_036008275
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,019,230 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152383   ⟹   XP_036008276
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,019,229 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152384   ⟹   XP_036008277
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,874 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036152385   ⟹   XP_036008278
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,876 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001785180
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,963,722 - 143,045,878 (-)NCBI
GRCm386143,017,998 - 143,100,155 (-)NCBI
Sequence:
RefSeq Acc Id: XR_001785182
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,963,789 - 143,045,878 (-)NCBI
GRCm386143,018,063 - 143,100,155 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004933627
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,877 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004933628
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396142,956,653 - 143,045,877 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001103158 (Get FASTA)   NCBI Sequence Viewer  
  NP_001273507 (Get FASTA)   NCBI Sequence Viewer  
  NP_001349042 (Get FASTA)   NCBI Sequence Viewer  
  NP_001349043 (Get FASTA)   NCBI Sequence Viewer  
  NP_001349044 (Get FASTA)   NCBI Sequence Viewer  
  NP_001349045 (Get FASTA)   NCBI Sequence Viewer  
  NP_001349046 (Get FASTA)   NCBI Sequence Viewer  
  NP_001349047 (Get FASTA)   NCBI Sequence Viewer  
  NP_083357 (Get FASTA)   NCBI Sequence Viewer  
  NP_084173 (Get FASTA)   NCBI Sequence Viewer  
  XP_006507060 (Get FASTA)   NCBI Sequence Viewer  
  XP_006507072 (Get FASTA)   NCBI Sequence Viewer  
  XP_017177286 (Get FASTA)   NCBI Sequence Viewer  
  XP_017177287 (Get FASTA)   NCBI Sequence Viewer  
  XP_017177288 (Get FASTA)   NCBI Sequence Viewer  
  XP_017177289 (Get FASTA)   NCBI Sequence Viewer  
  XP_017177290 (Get FASTA)   NCBI Sequence Viewer  
  XP_017177291 (Get FASTA)   NCBI Sequence Viewer  
  XP_017177293 (Get FASTA)   NCBI Sequence Viewer  
  XP_017177296 (Get FASTA)   NCBI Sequence Viewer  
  XP_017177298 (Get FASTA)   NCBI Sequence Viewer  
  XP_017177302 (Get FASTA)   NCBI Sequence Viewer  
  XP_030111509 (Get FASTA)   NCBI Sequence Viewer  
  XP_036008268 (Get FASTA)   NCBI Sequence Viewer  
  XP_036008269 (Get FASTA)   NCBI Sequence Viewer  
  XP_036008270 (Get FASTA)   NCBI Sequence Viewer  
  XP_036008271 (Get FASTA)   NCBI Sequence Viewer  
  XP_036008272 (Get FASTA)   NCBI Sequence Viewer  
  XP_036008273 (Get FASTA)   NCBI Sequence Viewer  
  XP_036008274 (Get FASTA)   NCBI Sequence Viewer  
  XP_036008275 (Get FASTA)   NCBI Sequence Viewer  
  XP_036008276 (Get FASTA)   NCBI Sequence Viewer  
  XP_036008277 (Get FASTA)   NCBI Sequence Viewer  
  XP_036008278 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH27763 (Get FASTA)   NCBI Sequence Viewer  
  AAH49905 (Get FASTA)   NCBI Sequence Viewer  
  AAH53913 (Get FASTA)   NCBI Sequence Viewer  
  BAB30814 (Get FASTA)   NCBI Sequence Viewer  
  BAC26634 (Get FASTA)   NCBI Sequence Viewer  
  BAD32244 (Get FASTA)   NCBI Sequence Viewer  
  BAE36733 (Get FASTA)   NCBI Sequence Viewer  
  BAE37246 (Get FASTA)   NCBI Sequence Viewer  
  EDL10655 (Get FASTA)   NCBI Sequence Viewer  
  EDL10656 (Get FASTA)   NCBI Sequence Viewer  
  EDL10657 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000084758
  ENSMUSP00000084758.5
  ENSMUSP00000107388.4
  ENSMUSP00000127834
  ENSMUSP00000127834.2
  ENSMUSP00000145019.2
  ENSMUSP00000145173.2
  ENSMUSP00000145373
  ENSMUSP00000145373.2
  ENSMUSP00000145382.2
  ENSMUSP00000145397.2
  ENSMUSP00000145425
  ENSMUSP00000145425.2
GenBank Protein Q7TPS5 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_083357   ⟸   NM_029081
- Peptide Label: isoform 1
- UniProtKB: Q8CID5 (UniProtKB/Swiss-Prot),   Q8C0U3 (UniProtKB/Swiss-Prot),   Q80VA1 (UniProtKB/Swiss-Prot),   Q6A052 (UniProtKB/Swiss-Prot),   Q3TQY6 (UniProtKB/Swiss-Prot),   Q9CS85 (UniProtKB/Swiss-Prot),   Q7TPS5 (UniProtKB/Swiss-Prot),   Q3TSE2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_084173   ⟸   NM_029897
- Peptide Label: isoform 2
- UniProtKB: E9Q026 (UniProtKB/TrEMBL),   Q3TSE2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001103158   ⟸   NM_001109688
- Peptide Label: isoform 3
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001273507   ⟸   NM_001286578
- Peptide Label: isoform 4
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006507060   ⟸   XM_006506997
- Peptide Label: isoform X1
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006507072   ⟸   XM_006507009
- Peptide Label: isoform X18
- Sequence:
RefSeq Acc Id: XP_017177286   ⟸   XM_017321797
- Peptide Label: isoform X2
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017177298   ⟸   XM_017321809
- Peptide Label: isoform X12
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017177288   ⟸   XM_017321799
- Peptide Label: isoform X4
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017177293   ⟸   XM_017321804
- Peptide Label: isoform X8
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017177290   ⟸   XM_017321801
- Peptide Label: isoform X6
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017177291   ⟸   XM_017321802
- Peptide Label: isoform X7
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017177287   ⟸   XM_017321798
- Peptide Label: isoform X3
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017177289   ⟸   XM_017321800
- Peptide Label: isoform X5
- UniProtKB: A0A0N4SW93 (UniProtKB/TrEMBL),   Q3TSE2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017177296   ⟸   XM_017321807
- Peptide Label: isoform X10
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017177302   ⟸   XM_017321813
- Peptide Label: isoform X21
- Sequence:
RefSeq Acc Id: NP_001349047   ⟸   NM_001362118
- Peptide Label: isoform 10
RefSeq Acc Id: NP_001349044   ⟸   NM_001362115
- Peptide Label: isoform 7
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001349043   ⟸   NM_001362114
- Peptide Label: isoform 6
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001349046   ⟸   NM_001362117
- Peptide Label: isoform 9
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001349045   ⟸   NM_001362116
- Peptide Label: isoform 8
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001349042   ⟸   NM_001362113
- Peptide Label: isoform 5
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030111509   ⟸   XM_030255649
- Peptide Label: isoform X14
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000145173   ⟸   ENSMUST00000204140
RefSeq Acc Id: ENSMUSP00000145382   ⟸   ENSMUST00000204043
RefSeq Acc Id: ENSMUSP00000107388   ⟸   ENSMUST00000111758
RefSeq Acc Id: ENSMUSP00000145425   ⟸   ENSMUST00000203673
RefSeq Acc Id: ENSMUSP00000145373   ⟸   ENSMUST00000203187
RefSeq Acc Id: ENSMUSP00000084758   ⟸   ENSMUST00000087485
RefSeq Acc Id: ENSMUSP00000127834   ⟸   ENSMUST00000171349
RefSeq Acc Id: ENSMUSP00000145397   ⟸   ENSMUST00000205119
RefSeq Acc Id: ENSMUSP00000145019   ⟸   ENSMUST00000204655
RefSeq Acc Id: XP_036008268   ⟸   XM_036152375
- Peptide Label: isoform X9
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036008278   ⟸   XM_036152385
- Peptide Label: isoform X22
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036008269   ⟸   XM_036152376
- Peptide Label: isoform X11
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036008270   ⟸   XM_036152377
- Peptide Label: isoform X13
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036008273   ⟸   XM_036152380
- Peptide Label: isoform X17
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036008272   ⟸   XM_036152379
- Peptide Label: isoform X16
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036008271   ⟸   XM_036152378
- Peptide Label: isoform X15
- UniProtKB: Q3TSE2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036008277   ⟸   XM_036152384
- Peptide Label: isoform X21
RefSeq Acc Id: XP_036008274   ⟸   XM_036152381
- Peptide Label: isoform X18
RefSeq Acc Id: XP_036008275   ⟸   XM_036152382
- Peptide Label: isoform X19
RefSeq Acc Id: XP_036008276   ⟸   XM_036152383
- Peptide Label: isoform X20
Protein Domains
C2

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7TPS5-F1-model_v2 AlphaFold Q7TPS5 1-1016 view protein structure

Promoters
RGD ID:6847975
Promoter ID:MM_ACW:43114
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:5730419I09RIK.QSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366142,961,751 - 142,962,251 (-)MPROMDB
RGD ID:6838754
Promoter ID:MM_KWN:48160
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:ENSMUST00000070301
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366143,027,276 - 143,027,776 (-)MPROMDB
RGD ID:6838756
Promoter ID:MM_KWN:48161
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:UC009EPW.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366143,031,541 - 143,032,041 (-)MPROMDB
RGD ID:6839557
Promoter ID:MM_KWN:48162
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day3,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:NM_001109688,   NM_029081,   NM_029897,   UC009EPX.1,   UC009EPY.1,   UC009EQA.1,   UC009EQB.1,   UC009EQC.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366143,048,459 - 143,048,959 (-)MPROMDB
RGD ID:6891452
Promoter ID:EPDNEW_M9177
Type:single initiation site
Name:C2cd5_3
Description:Mus musculus C2 calcium-dependent domain containing 5 , transcriptvariant 10, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M9178  EPDNEW_M9179  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm386143,085,585 - 143,085,645EPDNEW
RGD ID:6891456
Promoter ID:EPDNEW_M9178
Type:initiation region
Name:C2cd5_1
Description:Mus musculus C2 calcium-dependent domain containing 5 , transcriptvariant 10, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M9177  EPDNEW_M9179  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm386143,099,820 - 143,099,880EPDNEW
RGD ID:6891458
Promoter ID:EPDNEW_M9179
Type:initiation region
Name:C2cd5_2
Description:Mus musculus C2 calcium-dependent domain containing 5 , transcriptvariant 10, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M9177  EPDNEW_M9178  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm386143,100,095 - 143,100,155EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1921991 AgrOrtholog
Ensembl Genes ENSMUSG00000030279 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000087485 ENTREZGENE
  ENSMUST00000087485.7 UniProtKB/Swiss-Prot
  ENSMUST00000111758.9 UniProtKB/Swiss-Prot
  ENSMUST00000171349 ENTREZGENE
  ENSMUST00000171349.8 UniProtKB/TrEMBL
  ENSMUST00000203187 ENTREZGENE
  ENSMUST00000203187.3 UniProtKB/Swiss-Prot
  ENSMUST00000203673 ENTREZGENE
  ENSMUST00000203673.3 UniProtKB/TrEMBL
  ENSMUST00000204043.2 UniProtKB/TrEMBL
  ENSMUST00000204140.2 UniProtKB/TrEMBL
  ENSMUST00000204655.3 UniProtKB/TrEMBL
  ENSMUST00000205119 ENTREZGENE
  ENSMUST00000205119.3 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.150 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro C2_C2CD5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C2_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C2_domain_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C2CD5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Synaptotagmin UniProtKB/TrEMBL
  UPF0145_dom_sf UniProtKB/TrEMBL
KEGG Report mmu:74741 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1921991 ENTREZGENE
NCBI Gene 74741 ENTREZGENE
PANTHER C2 DOMAIN-CONTAINING PROTEIN 5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR37412 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PF00168 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen C2cd5 PhenoGen
PRINTS SYNAPTOTAGMN UniProtKB/TrEMBL
PROSITE PS50004 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART SM00239 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF117782 UniProtKB/TrEMBL
  SSF49562 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0N4SVN0_MOUSE UniProtKB/TrEMBL
  A0A0N4SW58_MOUSE UniProtKB/TrEMBL
  A0A0N4SW69_MOUSE UniProtKB/TrEMBL
  A0A0N4SW93 ENTREZGENE, UniProtKB/TrEMBL
  C2CD5_MOUSE UniProtKB/Swiss-Prot
  E9Q026 ENTREZGENE, UniProtKB/TrEMBL
  Q3TQY6 ENTREZGENE
  Q3TSE2 ENTREZGENE, UniProtKB/TrEMBL
  Q6A052 ENTREZGENE
  Q7TPS5 ENTREZGENE
  Q80VA1 ENTREZGENE
  Q8C0U3 ENTREZGENE
  Q8CID5 ENTREZGENE
  Q9CS85 ENTREZGENE
UniProt Secondary Q3TQY6 UniProtKB/Swiss-Prot
  Q6A052 UniProtKB/Swiss-Prot
  Q80VA1 UniProtKB/Swiss-Prot
  Q8C0U3 UniProtKB/Swiss-Prot
  Q8CID5 UniProtKB/Swiss-Prot
  Q9CS85 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-01-08 C2cd5  C2 calcium-dependent domain containing 5  5730419I09Rik  RIKEN cDNA 5730419I09 gene  Symbol and/or name change 5135510 APPROVED