Grm7 (glutamate receptor, metabotropic 7) - Rat Genome Database

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Gene: Grm7 (glutamate receptor, metabotropic 7) Mus musculus
Analyze
Symbol: Grm7
Name: glutamate receptor, metabotropic 7
RGD ID: 1557347
MGI Page MGI
Description: Exhibits calcium channel regulator activity and voltage-gated calcium channel activity. Involved in several processes, including behavioral fear response; learning or memory; and transmission of nerve impulse. Localizes to glutamatergic synapse and presynaptic membrane. Is expressed in several structures, including alimentary system; brain; eye; reproductive system; and spinal cord. Orthologous to human GRM7 (glutamate metabotropic receptor 7); PARTICIPATES IN glutamate signaling pathway; INTERACTS WITH 3,4-methylenedioxymethamphetamine; 4,4'-sulfonyldiphenol; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 6330570A01Rik; BB176677; C030018L03; E130018M02Rik; G protein-coupled receptor GRM7; G protein-coupled receptor, family C, group 1, member G; Gpr; Gpr1g; Gprc1g; metabotropic glutamate receptor 7; MGC90857; mGlu; mGlu7a receptor; mGluR7; SM; SMN2; Tg(SMN2)89Ahmb
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396110,622,304 - 111,544,191 (+)NCBIGRCm39mm39
GRCm39 Ensembl6110,622,542 - 111,544,191 (+)Ensembl
GRCm386110,645,349 - 111,567,230 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6110,645,581 - 111,567,230 (+)EnsemblGRCm38mm10GRCm38
MGSCv376110,595,592 - 111,517,224 (+)NCBIGRCm37mm9NCBIm37
MGSCv366110,611,375 - 111,533,007 (+)NCBImm8
Celera6112,489,164 - 113,410,129 (+)NCBICelera
Cytogenetic Map6E3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal action potential  (IAGP)
abnormal artery morphology  (IAGP)
abnormal axon morphology  (IAGP)
abnormal blood flow velocity  (IAGP)
abnormal CNS synaptic transmission  (IAGP)
abnormal conditioned taste aversion behavior  (IAGP)
abnormal contextual conditioning behavior  (IAGP)
abnormal excitatory postsynaptic currents  (IAGP)
abnormal gait  (IAGP)
abnormal gastrocnemius morphology  (IAGP)
abnormal heart morphology  (IAGP)
abnormal innervation  (IAGP)
abnormal innervation pattern to muscle  (IAGP)
abnormal interventricular septum morphology  (IAGP)
abnormal lumbar dorsal root ganglion morphology  (IAGP)
abnormal miniature endplate potential  (IAGP)
abnormal motor capabilities/coordination/movement  (IAGP)
abnormal motor coordination/balance  (IAGP)
abnormal motor nerve collateral sprouting  (IAGP)
abnormal motor neuron morphology  (IAGP)
abnormal muscle electrophysiology  (IAGP)
abnormal muscle morphology  (IAGP)
abnormal neuromuscular synapse morphology  (IAGP)
abnormal PNS synaptic transmission  (IAGP)
abnormal righting response  (IAGP)
abnormal sensory neuron innervation pattern  (IAGP)
abnormal skeletal muscle morphology  (IAGP)
abnormal spatial working memory  (IAGP)
abnormal spinal cord morphology  (IAGP)
abnormal suckling behavior  (IAGP)
abnormal sympathetic system morphology  (IAGP)
abnormal synaptic bouton morphology  (IAGP)
abnormal synaptic transmission  (IAGP)
bradykinesia  (IAGP)
cardiac interstitial fibrosis  (IAGP)
convulsive seizures  (IEA)
decreased anxiety-related response  (IEA)
decreased body size  (IAGP)
decreased body weight  (IAGP)
decreased bone mineral content  (IEA)
decreased grip strength  (IAGP)
decreased heart rate  (IAGP)
decreased motor neuron number  (IAGP)
decreased single cell response threshold  (IAGP)
decreased skeletal muscle fiber diameter  (IAGP)
decreased skeletal muscle fiber number  (IAGP)
decreased skeletal muscle fiber size  (IAGP)
decreased survivor rate  (IAGP)
dilated cardiomyopathy  (IAGP)
epidermal necrosis  (IAGP)
hyperactivity  (IEA)
hyperresponsive to tactile stimuli  (IEA)
hypoactivity  (IAGP)
hypopnea  (IAGP)
impaired balance  (IAGP)
impaired coordination  (IAGP)
impaired limb coordination  (IAGP)
impaired righting response  (IAGP)
increased exploration in new environment  (IEA)
increased heart left ventricle size  (IAGP)
increased heart rate variability  (IAGP)
increased mean platelet volume  (IEA)
increased sensitivity to xenobiotic induced morbidity/mortality  (IAGP)
increased skeletal muscle fiber size  (IAGP)
increased susceptibility to pharmacologically induced seizures  (IAGP)
irregular heartbeat  (IAGP)
kyphosis  (IAGP)
lethality, complete penetrance  (IAGP)
lethargy  (IAGP)
limb grasping  (IAGP)
motor neuron degeneration  (IAGP)
muscle weakness  (IAGP)
muscular atrophy  (IAGP)
neuronal intranuclear inclusions  (IAGP)
no abnormal phenotype detected  (IAGP)
oxidative stress  (IAGP)
paralysis  (IAGP)
perinatal lethality, incomplete penetrance  (IAGP)
poor grooming  (IAGP)
postnatal lethality  (IAGP)
postnatal lethality, complete penetrance  (IAGP)
premature death  (IAGP)
prenatal lethality, incomplete penetrance  (IAGP)
prolonged PR interval  (IAGP)
prolonged QRS complex duration  (IAGP)
prolonged QT interval  (IAGP)
prolonged RR interval  (IAGP)
reduced fertility  (IAGP)
respiratory distress  (IAGP)
seizures  (IAGP)
skeletal muscle fiber atrophy  (IAGP)
skeletal muscle fiber degeneration  (IAGP)
tail necrosis  (IAGP)
thin interventricular septum  (IAGP)
thin ventricular wall  (IAGP)
tremors  (IAGP)
weight loss  (IAGP)
References

Additional References at PubMed
PMID:9920659   PMID:10349636   PMID:10550060   PMID:10655541   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11584003   PMID:11698585   PMID:11706005   PMID:12065412   PMID:12477932  
PMID:12515823   PMID:12679517   PMID:12814372   PMID:14623865   PMID:15313036   PMID:15489334   PMID:15703193   PMID:16024054   PMID:16141072   PMID:16141073   PMID:16144832   PMID:16204199  
PMID:16237391   PMID:16396995   PMID:16602821   PMID:16775145   PMID:17114649   PMID:17156446   PMID:17273929   PMID:17311335   PMID:17318264   PMID:17553999   PMID:17561409   PMID:17650109  
PMID:17913700   PMID:17923533   PMID:17936574   PMID:18065780   PMID:18178576   PMID:18287559   PMID:18289889   PMID:18492800   PMID:18534761   PMID:18603534   PMID:18641645   PMID:18689355  
PMID:18716219   PMID:18799693   PMID:19010792   PMID:19047183   PMID:19074460   PMID:19158308   PMID:19329542   PMID:19332122   PMID:19477958   PMID:19884170   PMID:19945425   PMID:20019802  
PMID:20089893   PMID:20097677   PMID:20097679   PMID:20353761   PMID:20423346   PMID:20639395   PMID:20657731   PMID:20693262   PMID:20696672   PMID:20705736   PMID:20826664   PMID:20832308  
PMID:21085654   PMID:21118896   PMID:21143597   PMID:21325354   PMID:21396450   PMID:21448595   PMID:21658376   PMID:21677750   PMID:21681521   PMID:21708901   PMID:21785216   PMID:21785219  
PMID:21840928   PMID:21873635   PMID:21920940   PMID:21968514   PMID:22022549   PMID:22037760   PMID:22186025   PMID:22287544   PMID:22306031   PMID:22422766   PMID:22423102   PMID:22564442  
PMID:22641814   PMID:22705478   PMID:22723691   PMID:22763238   PMID:23029491   PMID:23063131   PMID:23136128   PMID:23174341   PMID:23285108   PMID:23382219   PMID:23390132   PMID:23512182  
PMID:23603202   PMID:23656793   PMID:23664812   PMID:23727836   PMID:23839956   PMID:23876328   PMID:24086650   PMID:24119341   PMID:24191055   PMID:24218366   PMID:24301677   PMID:24324819  
PMID:24332368   PMID:24463453   PMID:24590288   PMID:24596089   PMID:24691550   PMID:24722206   PMID:24760765   PMID:24781211   PMID:25047565   PMID:25055867   PMID:25557785   PMID:25692239  
PMID:25859009   PMID:25878277   PMID:25921811   PMID:25979088   PMID:26030275   PMID:26134627   PMID:26149357   PMID:26258776   PMID:26276812   PMID:26438828   PMID:26460027   PMID:26621405  
PMID:26733414   PMID:26758873   PMID:26911699   PMID:27030765   PMID:27111068   PMID:27188844   PMID:27199672   PMID:27373203   PMID:27488123   PMID:27907033   PMID:28017471   PMID:28062667  
PMID:28115638   PMID:28172892   PMID:28173138   PMID:28178525   PMID:28193854   PMID:28289706   PMID:28379354   PMID:28463115   PMID:28504671   PMID:28598330   PMID:28637335   PMID:28814546  
PMID:28823932   PMID:29227625   PMID:29281826   PMID:29371219   PMID:29377390   PMID:29552580   PMID:29941967   PMID:29982416   PMID:30010942   PMID:30012555   PMID:30050118   PMID:30215216  
PMID:30481286   PMID:30733501   PMID:30792629   PMID:30842449   PMID:30940718   PMID:31060774   PMID:31127156   PMID:31263170   PMID:31777926   PMID:31793148   PMID:31801075   PMID:31828288  
PMID:31851921   PMID:31981925   PMID:32325033   PMID:32768991   PMID:33084884   PMID:33212215   PMID:33219005   PMID:33504650  


Genomics

Comparative Map Data
Grm7
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396110,622,304 - 111,544,191 (+)NCBIGRCm39mm39
GRCm39 Ensembl6110,622,542 - 111,544,191 (+)Ensembl
GRCm386110,645,349 - 111,567,230 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6110,645,581 - 111,567,230 (+)EnsemblGRCm38mm10GRCm38
MGSCv376110,595,592 - 111,517,224 (+)NCBIGRCm37mm9NCBIm37
MGSCv366110,611,375 - 111,533,007 (+)NCBImm8
Celera6112,489,164 - 113,410,129 (+)NCBICelera
Cytogenetic Map6E3NCBI
GRM7
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl36,770,001 - 7,741,533 (+)EnsemblGRCh38hg38GRCh38
GRCh3836,861,115 - 7,743,038 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3736,902,802 - 7,783,220 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3636,877,927 - 7,758,217 (+)NCBINCBI36hg18NCBI36
Celera36,840,354 - 7,720,749 (+)NCBI
Cytogenetic Map3p26.1NCBI
HuRef36,836,943 - 7,718,334 (+)NCBIHuRef
CHM1_136,853,465 - 7,733,719 (+)NCBICHM1_1
Grm7
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24143,730,862 - 144,613,230 (+)NCBI
Rnor_6.0 Ensembl4142,780,987 - 143,367,578 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04142,452,616 - 143,368,460 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04206,230,927 - 206,680,107 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.04205,768,625 - 206,090,308 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44146,952,340 - 147,270,225 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14146,889,004 - 147,035,543 (-)NCBI
Celera4132,321,261 - 133,197,545 (+)NCBICelera
Cytogenetic Map4q41NCBI
Grm7
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554215,724,797 - 6,542,475 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554215,723,662 - 6,542,557 (-)NCBIChiLan1.0ChiLan1.0
GRM7
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.136,907,165 - 7,934,655 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl36,907,180 - 7,933,536 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v036,811,005 - 7,691,344 (+)NCBIMhudiblu_PPA_v0panPan3
GRM7
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12010,230,568 - 11,058,693 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2010,230,557 - 11,058,703 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2010,264,476 - 11,098,444 (-)NCBI
ROS_Cfam_1.02010,260,908 - 11,089,193 (-)NCBI
UMICH_Zoey_3.1209,981,742 - 10,808,873 (-)NCBI
UNSW_CanFamBas_1.02010,328,873 - 11,156,987 (-)NCBI
UU_Cfam_GSD_1.02010,300,259 - 11,134,699 (-)NCBI
Grm7
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494212,994,552 - 13,751,982 (+)NCBI
SpeTri2.0NW_0049366025,111,406 - 5,488,506 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GRM7
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1363,318,096 - 64,203,300 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11363,318,002 - 64,203,982 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21370,580,925 - 71,026,770 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GRM7
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12242,901,451 - 43,779,815 (+)NCBI
Grm7
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462477318,088,942 - 19,110,838 (+)NCBI

Position Markers
BB176677  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386111,567,014 - 111,567,142UniSTSGRCm38
MGSCv376111,517,008 - 111,517,136UniSTSGRCm37
Celera6113,409,913 - 113,410,041UniSTS
Cytogenetic Map6E3UniSTS
Whitehead/MRC_RH61142.32UniSTS
Avpr1b  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10D1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map18D3UniSTS
Cytogenetic MapXF1UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map13B2UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map10A1UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map13C1UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map17A1UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map7F1UniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map7F2UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map10D2UniSTS
Cytogenetic Map10B5.1UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic MapXA1.1UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map4C3UniSTS
Cytogenetic Map18B3UniSTS
cM Map1 UniSTS
42.MHAa96d6.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386111,227,818 - 111,227,971UniSTSGRCm38
MGSCv376111,177,812 - 111,177,965UniSTSGRCm37
Celera6113,068,549 - 113,068,702UniSTS
Cytogenetic Map6E3UniSTS
Whitehead_YAC6 UniSTS
D6Mit104  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386110,959,922 - 110,960,065UniSTSGRCm38
MGSCv376110,909,916 - 110,910,059UniSTSGRCm37
Celera6112,810,118 - 112,810,269UniSTS
Cytogenetic Map6E3UniSTS
cM Map645.5UniSTS
Whitehead Genetic641.5UniSTS
Whitehead/MRC_RH61136.95UniSTS
Whitehead_YAC6 UniSTS
D6Mit108  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386111,324,400 - 111,324,526UniSTSGRCm38
MGSCv376111,274,394 - 111,274,520UniSTSGRCm37
Celera6113,171,852 - 113,171,980UniSTS
Cytogenetic Map6E3UniSTS
cM Map648.1UniSTS
Whitehead Genetic643.7UniSTS
Whitehead_YAC6 UniSTS
D6Mit148  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386110,784,293 - 110,784,431UniSTSGRCm38
MGSCv376110,734,287 - 110,734,425UniSTSGRCm37
Celera6112,628,575 - 112,628,719UniSTS
Cytogenetic Map6E3UniSTS
cM Map645.5UniSTS
Whitehead Genetic641.5UniSTS
px-35d4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386111,379,086 - 111,379,268UniSTSGRCm38
MGSCv376111,329,080 - 111,329,262UniSTSGRCm37
Celera6113,235,249 - 113,235,431UniSTS
Celera6113,232,254 - 113,232,438UniSTS
Cytogenetic Map6E3UniSTS
GRM7_1388  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386111,566,440 - 111,567,208UniSTSGRCm38
MGSCv376111,516,434 - 111,517,202UniSTSGRCm37
Celera6113,409,339 - 113,410,107UniSTS
Cytogenetic Map6E3UniSTS
RH44758  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386111,081,535 - 111,083,097UniSTSGRCm38
MGSCv376111,031,529 - 111,033,091UniSTSGRCm37
Celera6112,926,273 - 112,927,835UniSTS
Cytogenetic Map6E3UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684122513118122513Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686806805113544602Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687503360121503555Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined689005405123005603Mouse
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690795610124795846Mouse
4141578Obrq1_mobesity resistance QTL 1 (mouse)Not determined92607306112004738Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692607306146429238Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined695004651129004738Mouse
1300704Cia3_mcollagen induced arthritis QTL 3 (mouse)Not determined696347325130347522Mouse
11040599Lmr4b_mleishmaniasis resistance 4b (mouse)696347325130347522Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96655951146633626Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96655951146633626Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696655951146633626Mouse
10043923Bhr7_mbronchial hyperresponsiveness 7 (mouse)Not determined698242853132242977Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698506837145935444Mouse
1301923Lith6_mlithogenic gene 6 (mouse)Not determined698717516132717715Mouse
1301915Chab3_mcholesterol absorption 3 (mouse)Not determined698931748132940036Mouse
1302131Bmd8_mbone mineral density 8 (mouse)Not determined699155128133155267Mouse
1300887Pabr1_mplasma apolipoprotein B (human) regulator 1 (mouse)Not determined6103777444136423692Mouse
12910776Hcga4b_mhome cage activity 4b (mouse)6104503360110960065Mouse
1301509Sluc3_msusceptibility to lung cancer 3 (mouse)Not determined6104503360127042975Mouse
1357806Aaj3_manxiety in A/J 3 (mouse)Not determined6104503360136423692Mouse
1357793Pnhdlc1_mplasma non-HDL cholesterol 1 (mouse)Not determined6105564822114368849Mouse
4141699Ibdq2_minflammatory bowel disease QTL 2 (mouse)Not determined106005405120917141Mouse
10412207Cypr5_mcytokine production 5 (mouse)Not determined6110838217144838360Mouse
12910774Hcga4c_mhome cage activity 4c (mouse)6110959922112581887Mouse
13463481Mcvq14_mmean corpuscular volume QTL 14 (mouse)6111165485145165578Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3717
Count of miRNA genes:910
Interacting mature miRNAs:1324
Transcripts:ENSMUST00000071076, ENSMUST00000172951, ENSMUST00000173001, ENSMUST00000174018, ENSMUST00000174310
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001346640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_177328 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505301 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006505302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017321298 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001785078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001785080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003956139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003956140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003956141 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003956142 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004942887 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC114643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC121894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC125046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC132394 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC142264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC165365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC169981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC169984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047160 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047733 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY255607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC080315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000071076   ⟹   ENSMUSP00000064404
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6110,645,581 - 111,566,067 (+)Ensembl
RefSeq Acc Id: ENSMUST00000172951   ⟹   ENSMUSP00000133957
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6110,645,582 - 111,567,230 (+)Ensembl
RefSeq Acc Id: ENSMUST00000173001   ⟹   ENSMUSP00000134233
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6111,495,715 - 111,499,933 (+)Ensembl
RefSeq Acc Id: ENSMUST00000174018   ⟹   ENSMUSP00000134635
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6110,645,581 - 111,497,090 (+)Ensembl
RefSeq Acc Id: ENSMUST00000174310   ⟹   ENSMUSP00000133897
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6111,495,744 - 111,502,284 (+)Ensembl
RefSeq Acc Id: NM_001346640   ⟹   NP_001333569
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396110,622,473 - 111,544,191 (+)NCBI
GRCm386110,645,512 - 111,567,230 (+)NCBI
Sequence:
RefSeq Acc Id: NM_177328   ⟹   NP_796302
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396110,622,559 - 111,544,191 (+)NCBI
GRCm386110,645,598 - 111,567,230 (+)NCBI
MGSCv376110,595,592 - 111,517,224 (+)RGD
Celera6112,489,164 - 113,410,129 (+)RGD
cM Map6 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006505296   ⟹   XP_006505359
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396110,622,304 - 111,488,774 (+)NCBI
GRCm386110,645,349 - 111,511,813 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505298   ⟹   XP_006505361
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396110,622,304 - 111,485,326 (+)NCBI
GRCm386110,645,349 - 111,508,355 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505300   ⟹   XP_006505363
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396110,622,304 - 111,477,959 (+)NCBI
GRCm386110,645,349 - 111,500,998 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505301   ⟹   XP_006505364
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396110,622,304 - 111,477,959 (+)NCBI
GRCm386110,645,349 - 111,500,998 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006505302   ⟹   XP_006505365
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396110,622,304 - 111,472,845 (+)NCBI
GRCm386110,645,349 - 111,495,690 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017321298   ⟹   XP_017176787
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396110,622,304 - 111,487,949 (+)NCBI
GRCm386110,645,349 - 111,510,988 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001785078
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396110,622,304 - 111,488,774 (+)NCBI
GRCm386110,645,349 - 111,511,813 (+)NCBI
Sequence:
RefSeq Acc Id: XR_001785080
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396110,622,304 - 111,488,774 (+)NCBI
GRCm386110,645,349 - 111,511,813 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003956139
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396110,622,304 - 111,488,774 (+)NCBI
GRCm386110,645,349 - 111,511,813 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003956140
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396110,622,304 - 111,488,774 (+)NCBI
GRCm386110,645,349 - 111,511,813 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003956141
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396110,622,304 - 111,488,774 (+)NCBI
GRCm386110,645,349 - 111,511,813 (+)NCBI
Sequence:
RefSeq Acc Id: XR_003956142
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396110,622,304 - 111,488,774 (+)NCBI
GRCm386110,645,349 - 111,511,813 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004942887
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396110,622,304 - 111,488,774 (+)NCBI
Reference Sequences
RefSeq Acc Id: NP_796302   ⟸   NM_177328
- Peptide Label: isoform 1 precursor
- UniProtKB: Q68ED2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006505363   ⟸   XM_006505300
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006505365   ⟸   XM_006505302
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_006505359   ⟸   XM_006505296
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006505361   ⟸   XM_006505298
- Peptide Label: isoform X2
- UniProtKB: G5E8D5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006505364   ⟸   XM_006505301
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_017176787   ⟸   XM_017321298
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001333569   ⟸   NM_001346640
- Peptide Label: isoform 2 precursor
- UniProtKB: G5E8D5 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000064404   ⟸   ENSMUST00000071076
RefSeq Acc Id: ENSMUSP00000133957   ⟸   ENSMUST00000172951
RefSeq Acc Id: ENSMUSP00000133897   ⟸   ENSMUST00000174310
RefSeq Acc Id: ENSMUSP00000134635   ⟸   ENSMUST00000174018
RefSeq Acc Id: ENSMUSP00000134233   ⟸   ENSMUST00000173001
Protein Domains
ANF_receptor   G_PROTEIN_RECEP_F3_4   NCD3G

Promoters
RGD ID:6839425
Promoter ID:MM_KWN:47114
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:NM_177328,   UC009DDS.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366110,595,241 - 110,595,741 (+)MPROMDB
RGD ID:6890592
Promoter ID:EPDNEW_M8747
Type:multiple initiation site
Name:Grm7_1
Description:Mus musculus glutamate receptor, metabotropic 7 , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8748  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm386110,645,582 - 110,645,642EPDNEW
RGD ID:6890594
Promoter ID:EPDNEW_M8748
Type:single initiation site
Name:Grm7_2
Description:Mus musculus glutamate receptor, metabotropic 7 , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8747  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm386110,722,780 - 110,722,840EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1351344 AgrOrtholog
Ensembl Genes ENSMUSG00000056755 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000064404 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000133897 UniProtKB/TrEMBL
  ENSMUSP00000133957 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000134233 UniProtKB/TrEMBL
  ENSMUSP00000134635 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000071076 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000172951 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000173001 UniProtKB/TrEMBL
  ENSMUST00000174018 UniProtKB/TrEMBL
  ENSMUST00000174310 UniProtKB/TrEMBL
Gene3D-CATH 2.10.50.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ANF_lig-bd_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_3_9-Cys_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_3_9-Cys_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_3_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_3_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_3_mtglu_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_3_mtglu_rcpt_7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Peripla_BP_I UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:108073 UniProtKB/Swiss-Prot
MGD MGI:1351344 ENTREZGENE
NCBI Gene 108073 ENTREZGENE
Pfam 7tm_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ANF_receptor UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NCD3G UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Grm7 PhenoGen
PRINTS GPCRMGR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MTABOTROPC7R UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MTABOTROPICR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F3_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F3_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F3_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F3_4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF53822 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt G3UY08_MOUSE UniProtKB/TrEMBL
  G3UYV0_MOUSE UniProtKB/TrEMBL
  G3UZU3_MOUSE UniProtKB/TrEMBL
  G5E8D5 ENTREZGENE, UniProtKB/TrEMBL
  GRM7_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q80T39_MOUSE UniProtKB/TrEMBL
  Q8BKE3_MOUSE UniProtKB/TrEMBL
  Q8BKZ1_MOUSE UniProtKB/TrEMBL
  Q8BL09_MOUSE UniProtKB/TrEMBL