GRM2 (glutamate metabotropic receptor 2) - Rat Genome Database

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Gene: GRM2 (glutamate metabotropic receptor 2) Homo sapiens
Analyze
Symbol: GRM2
Name: glutamate metabotropic receptor 2
RGD ID: 732930
HGNC Page HGNC:4594
Description: Predicted to enable group II metabotropic glutamate receptor activity and scaffold protein binding activity. Predicted to be involved in G protein-coupled glutamate receptor signaling pathway; positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction; and regulation of glutamatergic synaptic transmission. Predicted to act upstream of or within gene expression; intracellular glutamate homeostasis; and long-term synaptic depression. Predicted to be located in astrocyte projection and axon. Predicted to be active in glutamatergic synapse; postsynaptic membrane; and presynaptic membrane.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: GLUR2; glutamate receptor homolog; glutamate receptor, metabotropic 2; GPRC1B; metabotropic glutamate receptor 2; mGlu2; MGLUR2
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38351,707,068 - 51,718,613 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl351,707,068 - 51,718,613 (+)EnsemblGRCh38hg38GRCh38
GRCh37351,741,084 - 51,752,629 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36351,718,004 - 51,727,669 (+)NCBINCBI36Build 36hg18NCBI36
Build 34351,718,037 - 51,727,168NCBI
Celera351,718,848 - 51,731,506 (+)NCBICelera
Cytogenetic Map3p21.2NCBI
HuRef351,802,839 - 51,816,142 (+)NCBIHuRef
CHM1_1351,693,893 - 51,705,447 (+)NCBICHM1_1
T2T-CHM13v2.0351,738,578 - 51,751,605 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
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Original Reference(s)
GRM2HumanBinge Drinking  ISOGrm2 (Rattus norvegicus)405100715associated with human immunodeficiency virus infectious disease more ...RGD 
GRM2HumanCocaine-Related Disorders  ISOGrm2 (Rattus norvegicus)38501064knockout compared to wild typeRGD 
GRM2Humanheroin dependence  ISOGrm2 (Rattus norvegicus)38501063 RGD 
GRM2Humanschizophrenia  ISOGrm2 (Rattus norvegicus)401901203mRNA:decreased expression:prefrontal cortex and striatumRGD 
Object Symbol
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Original Reference(s)
GRM2Humanamphetamine abuse  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:20211215
GRM2Humanschizophrenia  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:18923069
GRM2Humansubstance-induced psychosis  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:20211215
GRM2Humantemporal lobe epilepsy  EXP 11554173CTD Direct Evidence: marker/mechanismCTDPMID:18804094

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Original Reference(s)
GRM2Human(+)-pilocarpine decreases expressionISOGrm2 (Rattus norvegicus)6480464Pilocarpine results in decreased expression of GRM2 mRNA and Pilocarpine results in decreased expression of GRM2 proteinCTDPMID:16793029 more ...
GRM2Human(S)-nicotine affects expressionISOGrm2 (Rattus norvegicus)6480464Nicotine affects the expression of GRM2 mRNACTDPMID:28339662
GRM2Human17beta-estradiol increases activityISOGrm2 (Rattus norvegicus)6480464Estradiol results in increased activity of GRM2 proteinCTDPMID:15901789
GRM2Human2,3',4,4',5-Pentachlorobiphenyl increases expressionISOGrm2 (Mus musculus)64804642 more ...CTDPMID:31388691
GRM2Human2,3,7,8-tetrachlorodibenzodioxine increases methylationISOGrm2 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased methylation of GRM2 geneCTDPMID:21212295
GRM2Human2,3,7,8-tetrachlorodibenzodioxine increases expressionISOGrm2 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in increased expression of GRM2 mRNACTDPMID:33387578
GRM2Human2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOGrm2 (Rattus norvegicus)6480464Tetrachlorodibenzodioxin results in decreased expression of GRM2 mRNACTDPMID:32109520
GRM2Human2,3,7,8-Tetrachlorodibenzofuran decreases expressionISOGrm2 (Rattus norvegicus)64804642 more ...CTDPMID:32109520
GRM2Human4,4'-sulfonyldiphenol decreases expressionISOGrm2 (Mus musculus)6480464bisphenol S results in decreased expression of GRM2 mRNACTDPMID:30951980
GRM2Human4,4'-sulfonyldiphenol multiple interactionsISOGrm2 (Rattus norvegicus)6480464[bisphenol A co-treated with bisphenol F co-treated with bisphenol S] results in decreased expression of GRM2 mRNACTDPMID:36041667
GRM2Human4-amino-2,6-dinitrotoluene affects expressionISOGrm2 (Rattus norvegicus)64804644-amino-2 and 6-dinitrotoluene affects the expression of GRM2 mRNACTDPMID:21346803
GRM2Human6-propyl-2-thiouracil decreases expressionISOGrm2 (Rattus norvegicus)6480464Propylthiouracil results in decreased expression of GRM2 mRNACTDPMID:24780913
GRM2Humanacrylamide decreases expressionEXP 6480464Acrylamide results in decreased expression of GRM2 mRNACTDPMID:32763439
GRM2Humanaflatoxin B1 decreases expressionEXP 6480464Aflatoxin B1 results in decreased expression of GRM2 mRNACTDPMID:22100608
GRM2Humanamiodarone increases expressionEXP 6480464Amiodarone results in increased expression of GRM2 mRNACTDPMID:19774075
GRM2Humanammonium chloride affects expressionISOGrm2 (Rattus norvegicus)6480464Ammonium Chloride affects the expression of GRM2 mRNACTDPMID:16483693
GRM2Humanaristolochic acid A increases expressionEXP 6480464aristolochic acid I results in increased expression of GRM2 mRNACTDPMID:33212167
GRM2Humanarsane affects methylationEXP 6480464Arsenic affects the methylation of GRM2 geneCTDPMID:25304211
GRM2Humanarsenic atom affects methylationEXP 6480464Arsenic affects the methylation of GRM2 geneCTDPMID:25304211
GRM2Humanbenzo[a]pyrene affects methylationEXP 6480464Benzo(a)pyrene affects the methylation of GRM2 5' UTRCTDPMID:27901495

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Biological Process
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Original Reference(s)
GRM2Humanadenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway involved_inIEAGO:0001641150520179 GOCGO_REF:0000108
GRM2Humanbehavioral response to nicotine  ISOGrm2 (Rattus norvegicus)9068941 RGDPMID:28700935 and REF_RGD_ID:38501064
GRM2Humanbehavioral response to nicotine involved_inIEAUniProtKB:P31421 and ensembl:ENSRNOP00000017607150520179 EnsemblGO_REF:0000107
GRM2Humancellular response to stress acts_upstream_of_or_withinIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP00000023959150520179 EnsemblGO_REF:0000107
GRM2Humanchemical synaptic transmission involved_inTAS 150520179 PMID:7620613PINCPMID:7620613
GRM2HumanG protein-coupled glutamate receptor signaling pathway involved_inIBAFB:FBgn0019985 more ...150520179 GO_CentralGO_REF:0000033
GRM2HumanG protein-coupled glutamate receptor signaling pathway involved_inIDA 150520179 PMID:37286794UniProtPMID:37286794
GRM2HumanG protein-coupled receptor signaling pathway involved_inIEAInterPro:IPR000162 more ...150520179 InterProGO_REF:0000002
GRM2HumanG protein-coupled receptor signaling pathway involved_inIEAUniProtKB-KW:KW-0297150520179 UniProtGO_REF:0000043
GRM2Humangene expression acts_upstream_of_or_withinIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP00000023959150520179 EnsemblGO_REF:0000107
GRM2Humanglutamate receptor signaling pathway involved_inIEAUniProtKB:P31421 and ensembl:ENSRNOP00000017607150520179 EnsemblGO_REF:0000107
GRM2Humanglutamate secretion involved_inIEAUniProtKB:P31421 and ensembl:ENSRNOP00000017607150520179 EnsemblGO_REF:0000107
GRM2Humanintracellular glutamate homeostasis acts_upstream_of_or_withinIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP00000023959150520179 EnsemblGO_REF:0000107
GRM2Humanlong-term synaptic depression acts_upstream_of_or_withinIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP00000023959150520179 EnsemblGO_REF:0000107
GRM2Humannegative regulation of adenylate cyclase activity involved_inTAS 150520179 PMID:7620613PINCPMID:7620613
GRM2Humanpositive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction involved_inIEAUniProtKB:P31421 and ensembl:ENSRNOP00000017607150520179 EnsemblGO_REF:0000107
GRM2Humanpositive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction involved_inISSUniProtKB:P31421150520179 ARUK-UCLGO_REF:0000024
GRM2Humanpresynaptic modulation of chemical synaptic transmission involved_inIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP00000023959150520179 EnsemblGO_REF:0000107
GRM2Humanregulation of dopamine secretion  ISOGrm2 (Rattus norvegicus)9068941 RGDPMID:30283001 and REF_RGD_ID:38501063
GRM2Humanregulation of dopamine secretion involved_inIEAUniProtKB:P31421 and ensembl:ENSRNOP00000017607150520179 EnsemblGO_REF:0000107
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Cellular Component
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Original Reference(s)
GRM2Humanastrocyte projection located_inIEAUniProtKB:P31421 and ensembl:ENSRNOP00000017607150520179 EnsemblGO_REF:0000107
GRM2Humanastrocyte projection located_inISSUniProtKB:P31421150520179 ARUK-UCLGO_REF:0000024
GRM2Humanaxon located_inISSUniProtKB:P31421150520179 ARUK-UCLGO_REF:0000024
GRM2Humanaxon located_inIEAUniProtKB:P31421 and ensembl:ENSRNOP00000017607150520179 EnsemblGO_REF:0000107
GRM2Humancell projection located_inIEAUniProtKB-KW:KW-0966150520179 UniProtGO_REF:0000043
GRM2Humandendrite located_inIEAUniProtKB-SubCell:SL-0283150520179 UniProtGO_REF:0000044
GRM2Humanglutamatergic synapse is_active_inIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP00000023959150520179 EnsemblGO_REF:0000107
GRM2Humanmembrane located_inIEAInterPro:IPR000162 more ...150520179 InterProGO_REF:0000002
GRM2Humanmembrane located_inIEAUniProtKB-SubCell:SL-0162150520179 UniProtGO_REF:0000044
GRM2Humanmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
GRM2Humanneuron projection located_inIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP00000023959150520179 EnsemblGO_REF:0000107
GRM2Humanplasma membrane located_inIEAUniProtKB-KW:KW-1003150520179 UniProtGO_REF:0000043
GRM2Humanplasma membrane is_active_inIDA 150520179 PMID:12011465UniProtPMID:12011465
GRM2Humanplasma membrane located_inTAS 150520179 PMID:7620613ReactomePMID:7620613 more ...
GRM2Humanplasma membrane is_active_inIBAFB:FBgn0000206 more ...150520179 GO_CentralGO_REF:0000033
GRM2Humanplasma membrane located_inIEAUniProtKB-SubCell:SL-0039150520179 UniProtGO_REF:0000044
GRM2Humanpostsynaptic membrane is_active_inIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP00000023959150520179 EnsemblGO_REF:0000107
GRM2Humanpresynaptic membrane is_active_inISOGrm2 (Rattus norvegicus)9068941PMID:35511883SynGOPMID:35511883 and REF_RGD_ID:405650215
GRM2Humanpresynaptic membrane located_inIEAUniProtKB:P31421 and ensembl:ENSRNOP00000017607150520179 EnsemblGO_REF:0000107
GRM2Humansynapse located_inIEAUniProtKB-KW:KW-0770150520179 UniProtGO_REF:0000043
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Molecular Function
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Original Reference(s)
GRM2Humancalcium channel regulator activity enablesIEAUniProtKB:Q14BI2 and ensembl:ENSMUSP00000023959150520179 EnsemblGO_REF:0000107
GRM2HumanG protein-coupled receptor activity enablesTAS 150520179 PMID:7620613UniProtPMID:7620613
GRM2HumanG protein-coupled receptor activity enablesIEAARBA:ARBA00029151150520179 UniProtGO_REF:0000117
GRM2HumanG protein-coupled receptor activity enablesIEAUniProtKB-KW:KW-0297150520179 UniProtGO_REF:0000043
GRM2HumanG protein-coupled receptor activity enablesIEAInterPro:IPR000337 more ...150520179 InterProGO_REF:0000002
GRM2Humanglutamate receptor activity enablesTAS 150520179 PMID:7620613UniProtPMID:7620613
GRM2Humanglutamate receptor activity enablesIDA 150520179 PMID:37286794UniProtPMID:37286794
GRM2Humanglutamate receptor activity enablesIEAARBA:ARBA00029160150520179 UniProtGO_REF:0000117
GRM2Humangroup II metabotropic glutamate receptor activity  ISOGrm2 (Rattus norvegicus)9068941 RGDPMID:12837619 and REF_RGD_ID:1298933
GRM2Humangroup II metabotropic glutamate receptor activity enablesIBAFB:FBgn0019985 more ...150520179 GO_CentralGO_REF:0000033
GRM2Humangroup II metabotropic glutamate receptor activity enablesIEAUniProtKB:P31421 more ...150520179 EnsemblGO_REF:0000107
GRM2Humanprotein binding enablesIPIUniProtKB:P28223-1150520179 PMID:18297054IntActPMID:18297054
GRM2Humanprotein binding enablesIPIUniProtKB:P0DTC2 more ...150520179 PMID:34903715IntActPMID:34903715
GRM2Humanprotein binding enablesIPIUniProtKB:Q58DX5 and UniProtKB:Q9UMX0-2150520179 PMID:25416956IntActPMID:25416956
GRM2Humanprotein binding enablesIPIUniProtKB:O14880 more ...150520179 PMID:32296183IntActPMID:32296183
GRM2Humanscaffold protein binding enablesIEAUniProtKB:P31421 and ensembl:ENSRNOP00000017607150520179 EnsemblGO_REF:0000107
GRM2Humanscaffold protein binding enablesISSUniProtKB:P31421150520179 ARUK-UCLGO_REF:0000024
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Imported Annotations - KEGG (archival)

Object Symbol
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Original Reference(s)
GRM2Humanglutamate signaling pathway  IEA 6907045 KEGGhsa:04724

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#
Reference Title
Reference Citation
1. Differences in 5-HT2A and mGlu2 Receptor Expression Levels and Repressive Epigenetic Modifications at the 5-HT2A Promoter Region in the Roman Low- (RLA-I) and High- (RHA-I) Avoidance Rat Strains. Fomsgaard L, etal., Mol Neurobiol. 2018 Mar;55(3):1998-2012. doi: 10.1007/s12035-017-0457-y. Epub 2017 Mar 6.
2. Deletion of the type 2 metabotropic glutamate receptor increases heroin abuse vulnerability in transgenic rats. Gao JT, etal., Neuropsychopharmacology. 2018 Dec;43(13):2615-2626. doi: 10.1038/s41386-018-0231-5. Epub 2018 Oct 3.
3. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
4. Online Mendelian Inheritance in Man, OMIM (TM). Online Mendelian Inheritance in Man, OMIM (TM).
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
8. Ethanol concentration-dependent alterations in gene expression during acute binge drinking in the HIV-1 transgenic rat. Sarkar S and Chang SL, Alcohol Clin Exp Res. 2013 Jul;37(7):1082-90. doi: 10.1111/acer.12077. Epub 2013 Feb 15.
9. Deletion of Type 2 Metabotropic Glutamate Receptor Decreases Sensitivity to Cocaine Reward in Rats. Yang HJ, etal., Cell Rep. 2017 Jul 11;20(2):319-332. doi: 10.1016/j.celrep.2017.06.046.
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PMID:7620613   PMID:8824806   PMID:8863838   PMID:9651375   PMID:11317221   PMID:11641422   PMID:11840499   PMID:11850456   PMID:11891216   PMID:11897108   PMID:12477932   PMID:15035981  
PMID:15246118   PMID:15330338   PMID:15489334   PMID:15837331   PMID:16102532   PMID:16344560   PMID:16678921   PMID:18297054   PMID:18853337   PMID:19026996   PMID:19086053   PMID:19156168  
PMID:19367581   PMID:19386277   PMID:19402024   PMID:19635471   PMID:19945495   PMID:20211215   PMID:21173788   PMID:21873635   PMID:21881873   PMID:22870276   PMID:22988116   PMID:23129762  
PMID:23149219   PMID:23407939   PMID:24080311   PMID:24623722   PMID:24949866   PMID:25150943   PMID:25416956   PMID:25571949   PMID:26589404   PMID:26758213   PMID:27218869   PMID:28319085  
PMID:28392297   PMID:29360159   PMID:30326345   PMID:31586073   PMID:31706572   PMID:32296183   PMID:33398167   PMID:34135509   PMID:34135510   PMID:34194039   PMID:34387961   PMID:34521824  
PMID:34903715   PMID:36779763   PMID:36889432   PMID:37629122   PMID:38739800  



GRM2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38351,707,068 - 51,718,613 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl351,707,068 - 51,718,613 (+)EnsemblGRCh38hg38GRCh38
GRCh37351,741,084 - 51,752,629 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36351,718,004 - 51,727,669 (+)NCBINCBI36Build 36hg18NCBI36
Build 34351,718,037 - 51,727,168NCBI
Celera351,718,848 - 51,731,506 (+)NCBICelera
Cytogenetic Map3p21.2NCBI
HuRef351,802,839 - 51,816,142 (+)NCBIHuRef
CHM1_1351,693,893 - 51,705,447 (+)NCBICHM1_1
T2T-CHM13v2.0351,738,578 - 51,751,605 (+)NCBIT2T-CHM13v2.0
Grm2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399106,521,733 - 106,533,308 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9106,520,294 - 106,533,281 (-)EnsemblGRCm39 Ensembl
GRCm389106,644,534 - 106,656,109 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9106,643,095 - 106,656,082 (-)EnsemblGRCm38mm10GRCm38
MGSCv379106,546,865 - 106,558,440 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369106,546,755 - 106,558,434 (-)NCBIMGSCv36mm8
Celera9106,265,562 - 106,277,130 (-)NCBICelera
Cytogenetic Map9F1NCBI
cM Map957.98NCBI
Grm2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88116,158,810 - 116,171,857 (-)NCBIGRCr8
mRatBN7.28107,280,099 - 107,293,159 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8107,280,099 - 107,293,146 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8112,903,031 - 112,916,129 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08111,102,213 - 111,115,309 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08108,944,991 - 108,958,085 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08115,344,999 - 115,358,628 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8115,344,999 - 115,358,046 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08114,705,123 - 114,718,193 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48111,837,086 - 111,850,133 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18111,857,819 - 111,869,581 (-)NCBI
Celera8106,592,051 - 106,605,096 (-)NCBICelera
Cytogenetic Map8q32NCBI
Grm2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555323,309,028 - 3,320,966 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555323,309,034 - 3,320,954 (+)NCBIChiLan1.0ChiLan1.0
GRM2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2251,694,559 - 51,707,434 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1351,699,333 - 51,712,208 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0351,639,792 - 51,652,779 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1352,873,144 - 52,884,401 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl352,873,144 - 52,884,395 (+)Ensemblpanpan1.1panPan2
GRM2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12037,915,178 - 37,926,276 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2037,915,665 - 37,924,296 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2037,895,193 - 37,906,256 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02038,264,331 - 38,275,394 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2038,264,304 - 38,275,372 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12037,627,888 - 37,638,953 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02038,036,604 - 38,047,669 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02038,321,755 - 38,332,818 (-)NCBIUU_Cfam_GSD_1.0
Grm2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560266,281,725 - 66,293,182 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365293,042,248 - 3,053,673 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365293,042,220 - 3,053,670 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GRM2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1333,926,804 - 33,938,269 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11333,924,303 - 33,938,279 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21337,130,553 - 37,141,351 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GRM2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12213,044,974 - 13,056,469 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2213,046,641 - 13,056,453 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041153,898,374 - 153,910,372 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Grm2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247305,419,896 - 5,431,361 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247305,419,892 - 5,431,268 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in GRM2
74 total Variants

1 to 10 of 83 rows
Name
Type
Condition(s)
Position(s)
Clinical significance
GRCh38/hg38 3p21.31-14.3(chr3:49461000-55314500)x1 copy number loss See cases [RCV000051511] Chr3:49461000..55314500 [GRCh38]
Chr3:49498433..55348528 [GRCh37]
Chr3:49473437..55323568 [NCBI36]
Chr3:3p21.31-14.3
pathogenic
NM_000839.3(GRM2):c.1297C>T (p.Arg433Cys) single nucleotide variant Malignant melanoma [RCV000066134] Chr3:51715070 [GRCh38]
Chr3:51749086 [GRCh37]
Chr3:51724126 [NCBI36]
Chr3:3p21.2
not provided
GRCh38/hg38 3p21.2-14.3(chr3:51394434-55064449)x1 copy number loss See cases [RCV000143631] Chr3:51394434..55064449 [GRCh38]
Chr3:51431865..55098476 [GRCh37]
Chr3:51406905..55073516 [NCBI36]
Chr3:3p21.2-14.3
likely pathogenic
NM_000839.5(GRM2):c.1354C>T (p.Arg452Cys) single nucleotide variant not specified [RCV004315279] Chr3:51715127 [GRCh38]
Chr3:51749143 [GRCh37]
Chr3:3p21.2
uncertain significance
NM_000839.5(GRM2):c.1904G>A (p.Arg635Gln) single nucleotide variant not specified [RCV004307960] Chr3:51715677 [GRCh38]
Chr3:51749693 [GRCh37]
Chr3:3p21.2
uncertain significance
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986) copy number gain See cases [RCV000512358] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986)x3 copy number gain See cases [RCV000511055] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61495-197838262)x3 copy number gain not provided [RCV000742138] Chr3:61495..197838262 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:60174-197948027)x3 copy number gain not provided [RCV000742133] Chr3:60174..197948027 [GRCh37]
Chr3:3p26.3-q29
pathogenic
NM_000839.5(GRM2):c.810C>T (p.Thr270=) single nucleotide variant not provided [RCV000884704] Chr3:51712832 [GRCh38]
Chr3:51746848 [GRCh37]
Chr3:3p21.2
benign
1 to 10 of 83 rows

Predicted Target Of
Summary Value
Count of predictions:2573
Count of miRNA genes:957
Interacting mature miRNAs:1155
Transcripts:ENST00000296479, ENST00000395052, ENST00000419928, ENST00000442933, ENST00000464585, ENST00000475478, ENST00000477330, ENST00000496661
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1298487BFD1_HBody fluid distribution QTL 1 (human)3.94Body fluid distributionimpedance ratio33638071262380712Human
1298489RA4_HRheumatoid arthritis QTL 4 (human)0.0283Joint/bone inflammationrheumatoid arthritis33638071262380712Human
1643509BW293_HBody Weight QTL 293 (human)1.42Body weightBMI33638071262380712Human
597022473GWAS1118547_Hmacrophage inflammatory protein 1b measurement QTL GWAS1118547 (human)5e-10chemokine amount (VT:0008721)35171327251713273Human
2289308BW392_HBody weight QTL 392 (human)1.42Body weightBMI33638071262380712Human
1331643COPD16_HChronic obstructive pulmonary disease QTL 16 (human)1.07Chronic airflow obstructionpost-BD FEV1 minus pre-BD FEV1/pre-BD FEV1 x 10034938065175380651Human

WI-20087  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37351,752,274 - 51,752,544UniSTSGRCh37
Build 36351,727,314 - 51,727,584RGDNCBI36
Celera351,731,151 - 51,731,421RGD
Cytogenetic Map3p21.2UniSTS
HuRef351,815,787 - 51,816,057UniSTS
GeneMap99-GB4 RH Map3160.13UniSTS
Whitehead-RH Map3211.7UniSTS
RH66405  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37351,752,321 - 51,752,463UniSTSGRCh37
Build 36351,727,361 - 51,727,503RGDNCBI36
Celera351,731,198 - 51,731,340RGD
Cytogenetic Map3p21.2UniSTS
HuRef351,815,834 - 51,815,976UniSTS
GeneMap99-GB4 RH Map3161.32UniSTS
A002C19  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37351,752,331 - 51,752,502UniSTSGRCh37
Build 36351,727,371 - 51,727,542RGDNCBI36
Celera351,731,208 - 51,731,379RGD
Cytogenetic Map3p21.2UniSTS
HuRef351,815,844 - 51,816,015UniSTS
GeneMap99-GB4 RH Map3161.32UniSTS
GRM2  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37351,746,554 - 51,746,750UniSTSGRCh37
Build 36351,721,594 - 51,721,790RGDNCBI36
Celera351,725,429 - 51,725,625RGD
HuRef351,810,065 - 51,810,261UniSTS
SHGC-77001  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3p21.2UniSTS
TNG Radiation Hybrid Map332009.0UniSTS
GeneMap99-GB4 RH Map3162.92UniSTS
NCBI RH Map3494.1UniSTS




adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
visual system
1202 2352 2787 2234 4899 1619 2174 1 533 1557 372 2223 6646 6051 45 3711 752 1695 1532 170 1


1 to 30 of 45 rows
RefSeq Transcripts NM_000839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001349116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001349117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_146059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011533635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011533636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011533637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011533642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011533643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017006271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024453490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047448047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047448048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047448049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047448050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047448051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054346367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054346368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054346369 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054346370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054346371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054346372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054346373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054346374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054346375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054346376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054346377 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB045011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB209164 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC099050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 45 rows

Ensembl Acc Id: ENST00000296479   ⟹   ENSP00000296479
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl351,707,088 - 51,718,112 (+)Ensembl
Ensembl Acc Id: ENST00000395052   ⟹   ENSP00000378492
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl351,707,068 - 51,718,613 (+)Ensembl
Ensembl Acc Id: ENST00000419928   ⟹   ENSP00000404797
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl351,707,411 - 51,709,193 (+)Ensembl
Ensembl Acc Id: ENST00000442933   ⟹   ENSP00000408906
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl351,708,845 - 51,718,252 (+)Ensembl
Ensembl Acc Id: ENST00000464585
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl351,707,305 - 51,718,613 (+)Ensembl
Ensembl Acc Id: ENST00000475478
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl351,707,090 - 51,718,613 (+)Ensembl
Ensembl Acc Id: ENST00000477330
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl351,711,272 - 51,712,581 (+)Ensembl
Ensembl Acc Id: ENST00000496661
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl351,711,272 - 51,714,068 (+)Ensembl
RefSeq Acc Id: NM_000839   ⟹   NP_000830
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38351,707,068 - 51,718,613 (+)NCBI
GRCh37351,741,081 - 51,752,629 (+)ENTREZGENE
Build 36351,718,004 - 51,727,669 (+)NCBI Archive
HuRef351,802,839 - 51,816,142 (+)ENTREZGENE
CHM1_1351,693,893 - 51,705,447 (+)NCBI
T2T-CHM13v2.0351,738,578 - 51,751,605 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001349116   ⟹   NP_001336045
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38351,707,068 - 51,718,613 (+)NCBI
T2T-CHM13v2.0351,738,578 - 51,751,605 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001349117   ⟹   NP_001336046
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38351,707,068 - 51,718,613 (+)NCBI
T2T-CHM13v2.0351,738,578 - 51,751,605 (+)NCBI
Sequence:
RefSeq Acc Id: NR_146059
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38351,707,068 - 51,718,613 (+)NCBI
T2T-CHM13v2.0351,738,578 - 51,751,605 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011533636   ⟹   XP_011531938
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38351,707,068 - 51,718,613 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011533637   ⟹   XP_011531939
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38351,710,699 - 51,718,613 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011533642   ⟹   XP_011531944
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38351,707,068 - 51,715,367 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011533643   ⟹   XP_011531945
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38351,713,223 - 51,718,613 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017006271   ⟹   XP_016861760
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38351,707,068 - 51,718,613 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024453490   ⟹   XP_024309258
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38351,707,068 - 51,715,268 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047448047   ⟹   XP_047304003
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38351,707,068 - 51,718,613 (+)NCBI
RefSeq Acc Id: XM_047448048   ⟹   XP_047304004
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38351,709,373 - 51,718,613 (+)NCBI
RefSeq Acc Id: XM_047448049   ⟹   XP_047304005
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38351,709,399 - 51,718,613 (+)NCBI
RefSeq Acc Id: XM_047448050   ⟹   XP_047304006
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38351,709,406 - 51,718,613 (+)NCBI
RefSeq Acc Id: XM_047448051   ⟹   XP_047304007
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38351,709,369 - 51,718,613 (+)NCBI
RefSeq Acc Id: XM_054346367   ⟹   XP_054202342
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0351,738,584 - 51,751,605 (+)NCBI
RefSeq Acc Id: XM_054346368   ⟹   XP_054202343
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0351,738,578 - 51,751,605 (+)NCBI
RefSeq Acc Id: XM_054346369   ⟹   XP_054202344
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0351,738,584 - 51,751,605 (+)NCBI
RefSeq Acc Id: XM_054346370   ⟹   XP_054202345
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0351,743,691 - 51,751,605 (+)NCBI
RefSeq Acc Id: XM_054346371   ⟹   XP_054202346
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0351,740,883 - 51,751,605 (+)NCBI
RefSeq Acc Id: XM_054346372   ⟹   XP_054202347
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0351,740,909 - 51,751,605 (+)NCBI
RefSeq Acc Id: XM_054346373   ⟹   XP_054202348
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0351,740,916 - 51,751,605 (+)NCBI
RefSeq Acc Id: XM_054346374   ⟹   XP_054202349
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0351,740,879 - 51,751,605 (+)NCBI
RefSeq Acc Id: XM_054346375   ⟹   XP_054202350
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0351,738,584 - 51,748,359 (+)NCBI
RefSeq Acc Id: XM_054346376   ⟹   XP_054202351
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0351,746,215 - 51,751,605 (+)NCBI
RefSeq Acc Id: XM_054346377   ⟹   XP_054202352
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0351,738,584 - 51,748,260 (+)NCBI
1 to 30 of 41 rows
Protein RefSeqs NP_000830 (Get FASTA)   NCBI Sequence Viewer  
  NP_001336045 (Get FASTA)   NCBI Sequence Viewer  
  NP_001336046 (Get FASTA)   NCBI Sequence Viewer  
  XP_011531938 (Get FASTA)   NCBI Sequence Viewer  
  XP_011531939 (Get FASTA)   NCBI Sequence Viewer  
  XP_011531944 (Get FASTA)   NCBI Sequence Viewer  
  XP_011531945 (Get FASTA)   NCBI Sequence Viewer  
  XP_016861760 (Get FASTA)   NCBI Sequence Viewer  
  XP_024309258 (Get FASTA)   NCBI Sequence Viewer  
  XP_047304003 (Get FASTA)   NCBI Sequence Viewer  
  XP_047304004 (Get FASTA)   NCBI Sequence Viewer  
  XP_047304005 (Get FASTA)   NCBI Sequence Viewer  
  XP_047304006 (Get FASTA)   NCBI Sequence Viewer  
  XP_047304007 (Get FASTA)   NCBI Sequence Viewer  
  XP_054202342 (Get FASTA)   NCBI Sequence Viewer  
  XP_054202343 (Get FASTA)   NCBI Sequence Viewer  
  XP_054202344 (Get FASTA)   NCBI Sequence Viewer  
  XP_054202345 (Get FASTA)   NCBI Sequence Viewer  
  XP_054202346 (Get FASTA)   NCBI Sequence Viewer  
  XP_054202347 (Get FASTA)   NCBI Sequence Viewer  
  XP_054202348 (Get FASTA)   NCBI Sequence Viewer  
  XP_054202349 (Get FASTA)   NCBI Sequence Viewer  
  XP_054202350 (Get FASTA)   NCBI Sequence Viewer  
  XP_054202351 (Get FASTA)   NCBI Sequence Viewer  
  XP_054202352 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA76855 (Get FASTA)   NCBI Sequence Viewer  
  AAH41447 (Get FASTA)   NCBI Sequence Viewer  
  AAI13616 (Get FASTA)   NCBI Sequence Viewer  
  AAI13620 (Get FASTA)   NCBI Sequence Viewer  
  AAY14640 (Get FASTA)   NCBI Sequence Viewer  
1 to 30 of 41 rows
1 to 5 of 29 rows
1 to 5 of 29 rows
RefSeq Acc Id: NP_000830   ⟸   NM_000839
- Peptide Label: isoform a precursor
- UniProtKB: Q52MC6 (UniProtKB/Swiss-Prot),   Q14CU5 (UniProtKB/Swiss-Prot),   B0M0K7 (UniProtKB/Swiss-Prot),   Q9H3N6 (UniProtKB/Swiss-Prot),   Q14416 (UniProtKB/Swiss-Prot),   A8K1R9 (UniProtKB/TrEMBL),   B0AZM5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011531938   ⟸   XM_011533636
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_011531944   ⟸   XM_011533642
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_011531939   ⟸   XM_011533637
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_011531945   ⟸   XM_011533643
- Peptide Label: isoform X6
- Sequence:
Name Modeler Protein Id AA Range Protein Structure
AF-Q14416-F1-model_v2 AlphaFold Q14416 1-872 view protein structure

RGD ID:6864566
Promoter ID:EPDNEW_H5448
Type:initiation region
Name:GRM2_1
Description:glutamate metabotropic receptor 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H5449  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38351,707,067 - 51,707,127EPDNEW
RGD ID:6864568
Promoter ID:EPDNEW_H5449
Type:multiple initiation site
Name:GRM2_2
Description:glutamate metabotropic receptor 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H5448  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38351,707,249 - 51,707,309EPDNEW
RGD ID:6801106
Promoter ID:HG_KWN:45181
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:NB4
Transcripts:ENST00000296479,   NM_000839,   OTTHUMT00000346544,   OTTHUMT00000346545,   OTTHUMT00000346546,   OTTHUMT00000346548,   UC003DBP.1,   UC010HLU.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36351,718,041 - 51,718,541 (+)MPROMDB


1 to 40 of 53 rows
Database
Acc Id
Source(s)
COSMIC GRM2 COSMIC
Ensembl Genes ENSG00000164082 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000296479 ENTREZGENE
  ENST00000395052 ENTREZGENE
  ENST00000395052.8 UniProtKB/Swiss-Prot
  ENST00000475478 ENTREZGENE
Gene3D-CATH 2.10.50.30 UniProtKB/Swiss-Prot
  3.40.50.2300 UniProtKB/Swiss-Prot
GTEx ENSG00000164082 GTEx
HGNC ID HGNC:4594 ENTREZGENE
Human Proteome Map GRM2 Human Proteome Map
InterPro ANF_lig-bd_rcpt UniProtKB/Swiss-Prot
  GPCR_3 UniProtKB/Swiss-Prot
  GPCR_3_9-Cys_dom UniProtKB/Swiss-Prot
  GPCR_3_9-Cys_sf UniProtKB/Swiss-Prot
  GPCR_3_C UniProtKB/Swiss-Prot
  GPCR_3_CS UniProtKB/Swiss-Prot
  GPCR_3_mtglu_rcpt UniProtKB/Swiss-Prot
  GPCR_3_mtglu_rcpt_2 UniProtKB/Swiss-Prot
  mGluR UniProtKB/Swiss-Prot
  Peripla_BP_I UniProtKB/Swiss-Prot
KEGG Report hsa:2912 UniProtKB/Swiss-Prot
NCBI Gene 2912 ENTREZGENE
OMIM 604099 OMIM
PANTHER METABOTROPIC GLUTAMATE RECEPTOR UniProtKB/Swiss-Prot
Pfam 7tm_3 UniProtKB/Swiss-Prot
  ANF_receptor UniProtKB/Swiss-Prot
  NCD3G UniProtKB/Swiss-Prot
PharmGKB PA28991 PharmGKB
PRINTS GPCRMGR UniProtKB/Swiss-Prot
  MTABOTROPC2R UniProtKB/Swiss-Prot
  MTABOTROPICR UniProtKB/Swiss-Prot
PROSITE G_PROTEIN_RECEP_F3_1 UniProtKB/Swiss-Prot
  G_PROTEIN_RECEP_F3_2 UniProtKB/Swiss-Prot
  G_PROTEIN_RECEP_F3_3 UniProtKB/Swiss-Prot
  G_PROTEIN_RECEP_F3_4 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF53822 UniProtKB/Swiss-Prot
UniProt A8K1R9 ENTREZGENE, UniProtKB/TrEMBL
  B0AZM5 ENTREZGENE, UniProtKB/TrEMBL
  B0M0K7 ENTREZGENE
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Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-04-12 GRM2  glutamate metabotropic receptor 2  GRM2  glutamate receptor, metabotropic 2  Symbol and/or name change 5135510 APPROVED