Gpr27 (G protein-coupled receptor 27)

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Gene: Gpr27 (G protein-coupled receptor 27) Mus musculus

Analyze

Symbol:

Gpr27

Name:

G protein-coupled receptor 27

RGD ID:

733558

MGI Page

MGI

Description:

Predicted to have G protein-coupled receptor activity. Involved in positive regulation of insulin secretion involved in cellular response to glucose stimulus and positive regulation of phospholipase C-activating G protein-coupled receptor signaling pathway. Localizes to plasma membrane. Orthologous to human GPR27 (G protein-coupled receptor 27); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 4-hydroxyphenyl retinamide; benzo[a]pyrene.

Type:

protein-coding

RefSeq Status:

VALIDATED

Also known as:

probable G-protein coupled receptor 27; super conserved receptor expressed in brain 1

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	GPR27 (G protein-coupled receptor 27)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Gpr27 (G protein-coupled receptor 27)	HGNC	Treefam, EggNOG, OrthoMCL, NCBI, OMA, HomoloGene, Inparanoid, Panther, PhylomeDB, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Gpr27 (G protein-coupled receptor 27)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	GPR27 (G protein-coupled receptor 27)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	GPR27 (G protein-coupled receptor 27)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Gpr27 (G protein-coupled receptor 27)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	GPR27 (G protein-coupled receptor 27)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	GPR27 (G protein-coupled receptor 27)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Gpr27 (G protein-coupled receptor 27)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Gpr27 (G protein-coupled receptor 27)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Homo sapiens (human):	GPR27 (G protein-coupled receptor 27)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|Roundup\|TreeFam)
Danio rerio (zebrafish):	gpr27 (G protein-coupled receptor 27)	Alliance	DIOPT (PhylomeDB\|TreeFam)

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	99,669,328 - 99,672,027 (+)	NCBI	GRCm39		mm39
GRCm38	6	99,692,367 - 99,695,066 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	99,692,679 - 99,695,066 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	99,642,673 - 99,643,812 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	6	99,658,142 - 99,659,281 (+)	NCBI			mm8
Celera	6	101,556,763 - 101,557,942 (+)	NCBI		Celera
Cytogenetic Map	6	D3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

2,3,7,8-tetrachlorodibenzodioxine (EXP)

4-hydroxyphenyl retinamide (EXP)

6-propyl-2-thiouracil (ISO)

ammonium chloride (ISO)

atrazine (ISO)

belinostat (ISO)

benzo[a]pyrene (EXP,ISO)

bisphenol A (ISO)

cadmium atom (ISO)

cisplatin (ISO)

clofibrate (EXP)

cobalt dichloride (ISO)

copper atom (ISO)

copper(0) (ISO)

dextran sulfate (EXP)

dorsomorphin (ISO)

doxorubicin (ISO)

maneb (EXP)

mercury dibromide (ISO)

panobinostat (ISO)

paraquat (EXP)

phenylmercury acetate (ISO)

pirinixic acid (EXP)

sarin (ISO)

SB 431542 (ISO)

sunitinib (ISO)

tetrachloromethane (EXP)

titanium dioxide (EXP)

trichostatin A (ISO)

tunicamycin (EXP)

valproic acid (ISO)

vorinostat (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

G protein-coupled receptor signaling pathway (IEA)

positive regulation of insulin secretion involved in cellular response to glucose stimulus (IMP)

positive regulation of phospholipase C-activating G protein-coupled receptor signaling pathway (IDA,IMP)

signal transduction (IEA)

Cellular Component

integral component of membrane (IEA)

membrane (IEA)

plasma membrane (IBA,IDA)

Molecular Function

G protein-coupled receptor activity (IBA)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal endocrine pancreas physiology (IAGP)

decreased body weight (IAGP)

decreased circulating insulin level (IAGP)

decreased insulin secretion (IAGP)

impaired glucose tolerance (IAGP)

References

References - curated


1.	Matsumoto M, etal., Biochem Biophys Res Commun 2000 Jun 7;272(2):576-82.
2.	MGD and Homologene mouse data transfer
3.	MGD data from the GO Consortium
4.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5.	RGD automated import pipeline for gene-chemical interactions

Additional References at PubMed

PMID:9479505	PMID:16602821	PMID:17273929	PMID:21873635	PMID:22253604	PMID:32221326

Genomics

Comparative Map Data

Gpr27
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	99,669,328 - 99,672,027 (+)	NCBI	GRCm39		mm39
GRCm38	6	99,692,367 - 99,695,066 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	99,692,679 - 99,695,066 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	99,642,673 - 99,643,812 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	6	99,658,142 - 99,659,281 (+)	NCBI			mm8
Celera	6	101,556,763 - 101,557,942 (+)	NCBI		Celera
Cytogenetic Map	6	D3	NCBI

GPR27
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	3	71,753,855 - 71,756,496 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	3	71,753,855 - 71,756,496 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	3	71,803,201 - 71,804,328 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
GRCh37	3	71,803,006 - 71,805,647 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	71,885,891 - 71,887,018 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	3	71,885,890 - 71,887,018	NCBI
Celera	3	71,733,794 - 71,734,921 (+)	NCBI
Cytogenetic Map	3	p13	NCBI
CHM1_1	3	71,754,610 - 71,755,737 (+)	NCBI		CHM1_1

Gpr27
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	4	132,328,364 - 132,329,497 (+)	NCBI
Rnor_6.0 Ensembl	4	132,137,793 - 132,138,926 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	4	132,137,793 - 132,138,926 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	4	196,629,031 - 196,630,164 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	134,541,534 - 134,542,667 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	4	134,786,374 - 134,787,508 (+)	NCBI
Celera	4	121,187,535 - 121,188,668 (+)	NCBI		Celera
Cytogenetic Map	4	q34	NCBI

Gpr27
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955421	16,352,643 - 16,353,094 (-)	NCBI	ChiLan1.0	ChiLan1.0

GPR27
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	3	73,050,542 - 73,052,347 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
Mhudiblu_PPA_v0	3	71,693,611 - 71,696,247 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

GPR27
(Canis lupus familiaris - dog)

No map positions available.

Gpr27
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936603	3,241,741 - 3,289,996 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GPR27
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	53,152,062 - 53,153,192 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	53,152,038 - 53,154,537 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

GPR27
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	32,708,228 - 32,709,820 (+)	NCBI
ChlSab1.1 Ensembl	22	32,708,599 - 32,709,729 (+)	Ensembl

Gpr27
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624773	6,294,850 - 6,297,249 (+)	NCBI

Position Markers

UniSTS:487638

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	6	99,692,679 - 99,693,818	UniSTS	GRCm38
MGSCv37	6	99,642,673 - 99,643,812	UniSTS	GRCm37
Cytogenetic Map	6	E1	UniSTS

UniSTS:493241

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	6	99,692,679 - 99,693,818	UniSTS	GRCm38
MGSCv37	6	99,642,673 - 99,643,812	UniSTS	GRCm37
Cytogenetic Map	6	E1	UniSTS

UniSTS:494131

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	6	99,692,591 - 99,693,859	UniSTS	GRCm38
MGSCv37	6	99,642,585 - 99,643,853	UniSTS	GRCm37
Cytogenetic Map	6	E1	UniSTS

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
25440480	Moaq2_m	modifier of alien QTL 2 (mouse)					6	1	117500000	Mouse
26884414	Bzwq12_m	bi-zygomatic width QTL 12, 16 week (mouse)					6	3400000	139100000	Mouse
10412157	Fl1n_m	fatty liver 1 in NSY (mouse)			Not determined		6	45314059	128835032	Mouse
4142259	Tabw2_m	tally ho associated body weight 2 (mouse)			Not determined			46935985	136423692	Mouse
25314319	Histh6_m	histamine hypersensitivity 6 (mouse)					6	48720000	125360000	Mouse
25314320	Histh5_m	histamine hypersensitivity 5 (mouse)					6	48720000	148450000	Mouse
1301962	Eila2_m	ethanol induced locomotor activity 2 (mouse)			Not determined		6	48726556	125356785	Mouse
1357683	Igf1sl1_m	IGF-1 serum levels 1 (mouse)			Not determined		6	52161713	116155267	Mouse
1300650	Bw18_m	body weight QTL 18 (mouse)			Not determined		6	66713869	100714031	Mouse
1301876	Bits2_m	bitterness sensitivity 2 (mouse)			Not determined		6	70425898	104426034	Mouse
1301813	Skl3_m	skeletal size (tail length) 3 (mouse)			Not determined		6	70425898	104426034	Mouse
1301034	Egrm2_m	early growth rate (mouse)			Not determined		6	70425898	104426034	Mouse
1300869	Stheal5_m	soft tissue heal 5 (mouse)			Not determined		6	71575060	105575178	Mouse
1300954	Fcsa1_m	femoral cross-sectional area 1 (mouse)			Not determined		6	71981024	105981170	Mouse
1301521	Pas1c_m	pulmonary adenoma susceptibility 1c (mouse)			Not determined		6	71981024	105981170	Mouse
13506930	Recrq9_m	recombination rate in male meiosis QTL 9 (mouse)					6	73500000	134700000	Mouse
1301320	Ots1_m	ovarian teratoma susceptibility 1 (mouse)			Not determined		6	75447583	104503555	Mouse
10043901	Pfat5_m	predicted fat percentage 5 (mouse)			Not determined		6	75607306	109607450	Mouse
10412208	Cypr4_m	cytokine production 4 (mouse)			Not determined		6	75716503	109716697	Mouse
1357875	Pfat2_m	predicted fat percentage 2 (mouse)			Not determined		6	76463949	110464093	Mouse
4141376	Dbm1_m	diabetes modifier 1 (mouse)			Not determined		6	78629504	121115387	Mouse
14696731	Pairq1_m	P. aeruginosa infection resistance QTL 1 (mouse)					6	81500000	102200000	Mouse
10043864	T2dm4sa_m	type 2 diabetes mellitus 4 in SMXA RI mice (mouse)			Not determined		6	83713869	147052561	Mouse
11251720	Ewc4_m	ethanol withdrawal and consumption 4 (mouse)					6	84122513	118122513	Mouse
1301687	Mnic2_m	macronutrient intake (mouse)			Not determined		6	86806805	113544602	Mouse
1301744	Hdlq11_m	HDL QTL 11 (mouse)			Not determined		6	87503360	121503555	Mouse
1301262	Gasa3_m	gastritis type A susceptibility locus 3 (mouse)			Not determined		6	89005405	123005603	Mouse
1301244	Ichs_m	immediate cutaneous hypersensitivity QTL (mouse)			Not determined		6	90795610	124795846	Mouse
4141578	Obrq1_m	obesity resistance QTL 1 (mouse)			Not determined			92607306	112004738	Mouse
11353842	Bmiq4_m	body mass index QTL 4 (mouse)					6	92607306	146429238	Mouse
1301292	Cfbw2_m	cystic fibrosis body weight 2 (mouse)			Not determined		6	95004651	129004738	Mouse
1300704	Cia3_m	collagen induced arthritis QTL 3 (mouse)			Not determined		6	96347325	130347522	Mouse
11040599	Lmr4b_m	leishmaniasis resistance 4b (mouse)					6	96347325	130347522	Mouse
4141940	W6q5_m	weight 6 weeks QTL 5 (mouse)			Not determined			96655951	146633626	Mouse
4142416	Egq11_m	early growth QTL 11 (mouse)			Not determined			96655951	146633626	Mouse
1357555	Tesq2_m	testis weight QTL 2 (mouse)			Not determined		6	96655951	146633626	Mouse
10043923	Bhr7_m	bronchial hyperresponsiveness 7 (mouse)			Not determined		6	98242853	132242977	Mouse
1301518	Bbaa5_m	B.burgdorferi-associated arthritis 5 (mouse)			Not determined		6	98506837	145935444	Mouse
1301923	Lith6_m	lithogenic gene 6 (mouse)			Not determined		6	98717516	132717715	Mouse
1301915	Chab3_m	cholesterol absorption 3 (mouse)			Not determined		6	98931748	132940036	Mouse
1302131	Bmd8_m	bone mineral density 8 (mouse)			Not determined		6	99155128	133155267	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	174
Count of miRNA genes:	163
Interacting mature miRNAs:	168
Transcripts:	ENSMUST00000101122
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_008158	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC122929	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF027955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BX523686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000101122 ⟹ ENSMUSP00000098680

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	6	99,692,679 - 99,695,066 (+)	Ensembl

RefSeq Acc Id:

NM_008158 ⟹ NP_032184

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	6	99,669,328 - 99,672,027 (+)	NCBI
GRCm38	6	99,692,367 - 99,695,066 (+)	NCBI
MGSCv37	6	99,642,673 - 99,643,812 (+)	RGD
Celera	6	101,556,765 - 101,557,942 (+)	ENTREZGENE
cM Map	6		ENTREZGENE

Sequence:

show sequence

AGAGCCAAGAGGCGCGGCGGCGGAGGAGGAACGGGAGGAGGACGCGGAGCATGCGGGGGGCTGC
AGGCCTGCCCGCAGTGAAGCCCGCCGCGCCCAGGGCGCAGGGAGTGGCCGTCGCCTCCTGCGCG
CACCGCGACTGAGATGGCGGCGGCGGCGGCGCGGCCGAGGCGCGCCGAGCCCCCGGGGCAGGGC
CGGCCGGGCGCGGGCTGACAACCCCGCGGGCCGGGAGAGCTAGCGTGGAGGAGCGCAGGCCCCG
GGGCGGCCTACGGCGAGCGGCGAGGGCCGGCGGGGAGGAGGAGGAGCACGGCCGCGATGGCGAA
CGCTAGTGAGCCGGGCGGCGGCGGCAGCGGCGGAGGGGCCGAGGCTGCCGCGCTGGGCCTTAGG
CTGGCCACGCTCAGCCTGCTGCTGTGCGTGAGCCTGGCGGGCAACGTGCTGTTCGCGCTGCTCA
TCGTGCGGGAGCGCAGCCTGCACCGCGCGCCGTACTACCTGCTGCTCGACCTGTGCCTGGCCGA
CGGGCTGCGCGCGCTCGCCTGCCTCCCGGCCGTCATGCTGGCGGCGCGGCGCGCGGCGGCCGCG
GCGGGGACGCCGCCGGGCGCGCTGGGCTGCAAGCTGCTGGCCTTCCTGGCCGCACTCTTCTGCT
TCCACGCGGCCTTCCTGCTGCTGGGCGTGGGCGTCACCCGCTACCTGGCCATCGCGCACCACCG
CTTCTACGCCGAGCGCCTGGCCGGCTGGCCGTGCGCCGCGATGCTGGTGTGCGCCGCCTGGGCG
CTGGCTTTGGCCGCGGCCTTCCCGCCGGTGCTGGACGGCGGTGGCGCGGACGACGAGGACGCGC
CGTGCGCCCTGGAGCAGCGACCCGACGGCGCCCCGGGTGCGCTAGGCTTCCTGCTGCTCCTGGC
CGCGGTGGTGGGCGCCACGCACCTCGTCTACCTCCGCCTGCTCTTCTTCATCCACGACCGCCGC
AAGATGCGACCCGCGCGCCTGGTGCCCGCCGTCAGCCACGACTGGACCTTCCACGGCCCGGGCG
CCACCGGTCAGGCGGCCGCCAACTGGACGGCGGGCTTCGGCCGCGGGCCCACGCCACCTGCGCT
CGTGGGCATCAGGCCTGCAGGCCCGGGCCGCGGCGCCCGGCGCCTCCTGGTGCTGGAGGAGTTC
AAGACGGAGAAGAGGCTGTGCAAGATGTTCTACGCCATCACGCTGCTCTTCCTGCTCCTCTGGG
GCCCCTATGTGGTGGCCAGTTACCTGCGCGTCCTGGTGCGCCCGGGAGCTGTCCCGCAGGCCTA
CCTGACAGCCTCGGTGTGGCTGACATTCGCGCAGGCCGGCATCAACCCCGTGGTGTGTTTCCTC
TTCAACCGGGAGCTGAGGGACTGTTTCCGAGCCCAGTTTCCCTGCTGCCAGAGCCCCCAGGCCA
CGCAGGCCACCCTCCCCTGCGACCTGAAAGGCATTGGTTTGTGAAGCGCGCTCTGCCACCCAGG
CTCCCTCTGGCTTCGATTGTGACCGCTCATCTTTCCCTTCTGTCCCGTTGTCTGGTTTTTCTCT
GCTGCCTTCAGGAGACTCTGAAAGTGGACACGCACTTGGATTGTATAGACCCCTGTTCTGGGGC
CGGGGGAGGGATGCTGAGGTCCCGTTCTGTCCTTTAATTATACTTTCTTCCTGACAGTAGGCCC
TGCAGTCTTTTTGTACTGGTACCGACTTCTTTTCTTCCACGTGTGATTTTTTTTTTTTTTTAAA
TAAAGGCTACACTGGTTTTATTCATGCAAAGTTTCCTAGAGACCATGGCCAGTTTTCTACAGAG
GCTATTTTTGACAACCTCAAGTGGCATTACCTTTGCGTTGCAGTGAAGGAGAGCGAGCTAGGAG
ATGTTGGAGATGGAAGAGAGGGACAGAGTTGTCTAAAGTCCCCTCAGAACTGCAGGCCACAGGG
CCAGGTGAGCTGTGTGCCTTGTTTGGGGGGTGTGGGGGACTTCTCCCAGTGGTGACACTGAACT
TTAGGAGAAAATGCGAATGGGTAGGAGGACGGTCTTATTTGAGTCACTTAAGGAGCAAGGTCTG
GGGCCCTGTGTAAGTTATTATAAAACAATGCATCAGCAAACAGCTGCTCTGTAGACCAGTCTTG
GATGGAAACTTTCTGTGAGACTGTGACTTTTAAACAGTAAAAAGTGTTTTGGATAGTAATGTGG
AGAAAAAAAAAACAGTATTGCATGTGTTTGTACCGATTGTGATTTGCGGATGGGGTGGGCTCTG
GAGGGCAGAAAAATACAGGTTTGTTTGGGTTAGGGGTTTGGGGGATTTTCCCCCCCAATAAAAA
GTTAAAATACTTTTGTGGAAATGGCTTGTGCTTTGATAAGCCCAGTTTTACTCTGTATTATGAG
CTAATTTTCCCTCTGAAGACTTGTCTGTGGTTAAGAAGATATGGGATATAACGGTGCCTCTCCC
AGGAGACAAGCATTTTCCTGCGGTGTTTGCTAAGTTAGGTGGTGCTGTTCTACTCATGGCTGTT
TTCAATGATTAATAAGAAACCATAATTTAAAATACGATCTCTTTGTTAGACATTGTCACTTGAC
ACCGAAGGACTTCATTGCAAGTACTGTATAATACTTTTTGCTTAAACTGCTCTGTTTTTATTAA
TGTAACTTGCGTTTTGAAGATTTCTATCTGTACTTCTCTTTGCATTACACAAATATACCAGTAT
TTTCACTCTGGAAAAAAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_032184	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAC53540	(Get FASTA)	NCBI Sequence Viewer
	O54897	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_032184 ⟸ NM_008158

- UniProtKB:

O54897 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MANASEPGGGGSGGGAEAAALGLRLATLSLLLCVSLAGNVLFALLIVRERSLHRAPYYLLLDLC
LADGLRALACLPAVMLAARRAAAAAGTPPGALGCKLLAFLAALFCFHAAFLLLGVGVTRYLAIA
HHRFYAERLAGWPCAAMLVCAAWALALAAAFPPVLDGGGADDEDAPCALEQRPDGAPGALGFLL
LLAAVVGATHLVYLRLLFFIHDRRKMRPARLVPAVSHDWTFHGPGATGQAAANWTAGFGRGPTP
PALVGIRPAGPGRGARRLLVLEEFKTEKRLCKMFYAITLLFLLLWGPYVVASYLRVLVRPGAVP
QAYLTASVWLTFAQAGINPVVCFLFNRELRDCFRAQFPCCQSPQATQATLPCDLKGIGL

hide sequence

RefSeq Acc Id:

ENSMUSP00000098680 ⟸ ENSMUST00000101122

Promoters

RGD ID:

6839412

Promoter ID:

MM_KWN:47045

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Brain, Lung

Transcripts:

NM_008158

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	6	99,641,881 - 99,643,657 (+)	MPROMDB

RGD ID:

6890542

Promoter ID:

EPDNEW_M8722

Type:

multiple initiation site

Name:

Gpr27_1

Description:

Mus musculus G protein-coupled receptor 27 , mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	6	99,692,594 - 99,692,654	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1202299	AgrOrtholog
Ensembl Genes	ENSMUSG00000072875	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein	ENSMUSP00000098680	ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000101122	ENTREZGENE, UniProtKB/Swiss-Prot
InterPro	GPCR_Rhodpsn	UniProtKB/Swiss-Prot
	GPCR_Rhodpsn_7TM	UniProtKB/Swiss-Prot
KEGG Report	mmu:14761	UniProtKB/Swiss-Prot
MGD	MGI:1202299	ENTREZGENE
NCBI Gene	14761	ENTREZGENE
Pfam	7tm_1	UniProtKB/Swiss-Prot
PhenoGen	Gpr27	PhenoGen
PRINTS	GPCRRHODOPSN	UniProtKB/Swiss-Prot
PROSITE	G_PROTEIN_RECEP_F1_2	UniProtKB/Swiss-Prot
UniProt	GPR27_MOUSE	UniProtKB/Swiss-Prot, ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)