Cidec (cell death-inducing DFFA-like effector c) - Rat Genome Database

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Gene: Cidec (cell death-inducing DFFA-like effector c) Mus musculus
Analyze
Symbol: Cidec
Name: cell death-inducing DFFA-like effector c
RGD ID: 1557270
MGI Page MGI
Description: Predicted to be involved in execution phase of apoptosis; lipid droplet organization; and regulation of apoptotic process. Predicted to act upstream of or within apoptotic process. Predicted to be located in cytosol. Is expressed in several structures, including alimentary system; endocrine gland; genitourinary system; hemolymphoid system gland; and integumental system. Human ortholog(s) of this gene implicated in familial partial lipodystrophy type 5. Orthologous to human CIDEC (cell death inducing DFFA like effector c); INTERACTS WITH 1,2-dichloroethane; 1,2-dimethylhydrazine; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: cell death activator CIDE-3; cell death-inducing DFFA-like effector protein C; CIDE-; CIDE-3; CIDE-3alpha; fat specific gene 27; fat-specific protein FSP27; Fsp; Fsp27
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396113,401,595 - 113,412,721 (-)NCBIGRCm39mm39
GRCm39 Ensembl6113,401,595 - 113,412,721 (-)Ensembl
GRCm386113,424,634 - 113,435,760 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6113,424,634 - 113,435,760 (-)EnsemblGRCm38mm10GRCm38
MGSCv376113,374,630 - 113,385,749 (-)NCBIGRCm37mm9NCBIm37
MGSCv366113,390,413 - 113,401,532 (-)NCBImm8
Celera6115,251,600 - 115,262,724 (-)NCBICelera
Cytogenetic Map6E3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-chloro-2,4-dinitrobenzene  (ISO)
17beta-estradiol  (EXP,ISO)
1H-pyrazole  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2-chloroethanol  (EXP)
3,4-methylenedioxymethamphetamine  (EXP)
3-isobutyl-1-methyl-7H-xanthine  (EXP,ISO)
4,4'-sulfonyldiphenol  (ISO)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (ISO)
4-phenylbutyric acid  (EXP)
7,12-dimethyltetraphene  (ISO)
8-Br-cAMP  (EXP)
acetamide  (ISO)
aflatoxin B1  (ISO)
aflatoxin B2  (ISO)
amiodarone  (EXP)
amphetamine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
captan  (EXP)
carbon nanotube  (EXP)
choline  (EXP)
ciglitazone  (ISO)
ciguatoxin CTX1B  (EXP)
cisplatin  (ISO)
clofibrate  (EXP)
cobalt atom  (ISO)
cobalt dichloride  (ISO)
colforsin daropate hydrochloride  (EXP)
cyclosporin A  (EXP,ISO)
dexamethasone  (EXP,ISO)
dibutylstannane  (EXP,ISO)
diethyl maleate  (ISO)
diuron  (ISO)
emodin  (EXP)
endosulfan  (ISO)
flutamide  (ISO)
folic acid  (EXP)
folpet  (EXP)
furan  (EXP)
genistein  (EXP)
graphene oxide  (EXP)
hexadecanoic acid  (ISO)
indinavir  (EXP)
indometacin  (ISO)
isoprenaline  (EXP)
KT 5720  (EXP)
lamivudine  (EXP)
lipopolysaccharide  (EXP)
methyl methanesulfonate  (ISO)
monosodium L-glutamate  (EXP)
N-nitrosodiethylamine  (EXP)
N-nitrosodimethylamine  (ISO)
nefazodone  (ISO)
nickel atom  (ISO)
nickel sulfate  (ISO)
ochratoxin A  (ISO)
oleic acid  (ISO)
ozone  (EXP)
paracetamol  (EXP,ISO)
PCB138  (EXP)
perfluorohexanesulfonic acid  (EXP)
perfluorononanoic acid  (EXP)
perfluorooctanoic acid  (EXP,ISO)
phenobarbital  (EXP)
pioglitazone  (EXP)
pirinixic acid  (EXP)
progesterone  (EXP)
Ptaquiloside  (EXP)
quercetin  (ISO)
rifaximin  (ISO)
saquinavir  (EXP)
silicon dioxide  (EXP)
sirolimus  (EXP)
sodium arsenite  (EXP)
sodium dichromate  (EXP,ISO)
tetrachloromethane  (EXP)
titanium dioxide  (EXP)
tributylstannane  (EXP,ISO)
trichloroethene  (EXP)
triflumizole  (EXP,ISO)
triphenyl phosphate  (ISO)
Triptolide  (EXP)
triptonide  (EXP)
tris(2-butoxyethyl) phosphate  (ISO)
troglitazone  (EXP,ISO)
Tungsten carbide  (ISO)
tunicamycin  (EXP)
urethane  (EXP)
valdecoxib  (ISO)
valproic acid  (ISO)
XL147  (EXP)
zidovudine  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal adaptive thermogenesis  (IAGP)
abnormal adipose tissue amount  (IAGP)
abnormal blood homeostasis  (IAGP)
abnormal body weight  (IAGP)
abnormal brown adipose tissue morphology  (IAGP)
abnormal circulating lipid level  (IAGP)
abnormal fat cell morphology  (IAGP)
abnormal fat pad morphology  (IAGP)
abnormal gonadal fat pad morphology  (IAGP)
abnormal optic disk morphology  (IEA)
abnormal white adipose tissue morphology  (IAGP)
abnormal white adipose tissue physiology  (IAGP)
abnormal white fat cell morphology  (IAGP)
decreased circulating alkaline phosphatase level  (IEA)
decreased circulating free fatty acids level  (IAGP)
decreased circulating glucose level  (IAGP)
decreased circulating ketone body level  (IAGP)
decreased circulating leptin level  (IAGP)
decreased circulating triglyceride level  (IAGP)
decreased gonadal fat pad weight  (IAGP)
decreased inguinal fat pad weight  (IAGP)
decreased mesenteric fat pad weight  (IAGP)
decreased percent body fat/body weight  (IAGP)
decreased respiratory quotient  (IAGP)
decreased retroperitoneal fat pad weight  (IAGP)
decreased subcutaneous adipose tissue amount  (IAGP)
decreased susceptibility to age related obesity  (IAGP)
decreased susceptibility to diet-induced hepatic steatosis  (IAGP)
decreased susceptibility to diet-induced obesity  (IAGP)
decreased total body fat amount  (IAGP)
decreased white adipose tissue amount  (IAGP)
decreased white fat cell size  (IAGP)
enhanced lipolysis  (IAGP)
hepatic steatosis  (IAGP)
hyperactivity  (IAGP)
impaired adaptive thermogenesis  (IAGP)
improved glucose tolerance  (IAGP)
increased adipocyte glucose uptake  (IAGP)
increased body temperature  (IAGP)
increased brown adipose tissue amount  (IAGP)
increased circulating alanine transaminase level  (IAGP)
increased circulating free fatty acids level  (IAGP)
increased circulating insulin level  (IAGP)
increased circulating triglyceride level  (IAGP)
increased energy expenditure  (IAGP)
increased food intake  (IAGP)
increased insulin sensitivity  (IAGP)
increased lean body mass  (IAGP)
increased mean corpuscular volume  (IEA)
increased oxygen consumption  (IAGP)
increased respiratory quotient  (IAGP)
insulin resistance  (IAGP)
no abnormal phenotype detected  (IAGP)
References

Additional References at PubMed
PMID:1339452   PMID:9867840   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12429024   PMID:12477932   PMID:12910269   PMID:14610273   PMID:16141072   PMID:16141073  
PMID:17884815   PMID:18198355   PMID:18334488   PMID:18396136   PMID:18654663   PMID:18682832   PMID:18702959   PMID:18845124   PMID:19258494   PMID:20089860   PMID:20542418   PMID:20649970  
PMID:21103377   PMID:21521693   PMID:21677750   PMID:21873635   PMID:22144693   PMID:22245780   PMID:22790028   PMID:23149622   PMID:23192040   PMID:23204327   PMID:23220584   PMID:23233732  
PMID:23481402   PMID:24189421   PMID:24391757   PMID:24627478   PMID:24636991   PMID:25125366   PMID:25315694   PMID:25477509   PMID:25565658   PMID:26099526   PMID:26176546   PMID:26367078  
PMID:26417690   PMID:26733203   PMID:26921608   PMID:26963625   PMID:27884961   PMID:28007964   PMID:28287402   PMID:28490632   PMID:28566630   PMID:28656280   PMID:29454584   PMID:29986925  
PMID:30361435   PMID:30400015   PMID:31564684   PMID:31846369   PMID:31919850   PMID:32553626   PMID:32732898   PMID:32958928  


Genomics

Comparative Map Data
Cidec
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396113,401,595 - 113,412,721 (-)NCBIGRCm39mm39
GRCm39 Ensembl6113,401,595 - 113,412,721 (-)Ensembl
GRCm386113,424,634 - 113,435,760 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6113,424,634 - 113,435,760 (-)EnsemblGRCm38mm10GRCm38
MGSCv376113,374,630 - 113,385,749 (-)NCBIGRCm37mm9NCBIm37
MGSCv366113,390,413 - 113,401,532 (-)NCBImm8
Celera6115,251,600 - 115,262,724 (-)NCBICelera
Cytogenetic Map6E3NCBI
CIDEC
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl39,866,711 - 9,880,255 (-)EnsemblGRCh38hg38GRCh38
GRCh3839,866,710 - 9,880,253 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh3739,908,394 - 9,921,937 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3639,883,398 - 9,895,740 (-)NCBINCBI36hg18NCBI36
Build 3439,883,398 - 9,895,740NCBI
Celera39,843,853 - 9,856,196 (-)NCBI
Cytogenetic Map3p25.3NCBI
HuRef39,844,688 - 9,858,278 (-)NCBIHuRef
CHM1_139,858,598 - 9,872,132 (-)NCBICHM1_1
Cidec
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24146,569,288 - 146,582,173 (-)NCBImRatBN7.2
Rnor_6.0 Ensembl4145,377,431 - 145,390,497 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04145,377,482 - 145,390,497 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04208,674,528 - 208,687,883 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44149,307,986 - 149,321,303 (-)NCBIRGSC3.4rn4RGSC3.4
Celera4135,125,642 - 135,138,206 (-)NCBICelera
Cytogenetic Map4q42NCBI
Cidec
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555611,363,907 - 1,376,144 (-)NCBIChiLan1.0ChiLan1.0
CIDEC
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1310,048,161 - 10,174,570 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl310,048,554 - 10,173,107 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v039,811,995 - 9,836,069 (-)NCBIMhudiblu_PPA_v0panPan3
CIDEC
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1208,386,334 - 8,402,076 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl208,386,415 - 8,401,774 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha208,390,809 - 8,435,294 (+)NCBI
ROS_Cfam_1.0208,415,622 - 8,431,383 (+)NCBI
UMICH_Zoey_3.1208,138,175 - 8,154,070 (+)NCBI
UNSW_CanFamBas_1.0208,483,180 - 8,498,478 (+)NCBI
UU_Cfam_GSD_1.0208,456,276 - 8,471,982 (+)NCBI
Cidec
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494215,586,703 - 15,597,550 (-)NCBI
SpeTri2.0NW_0049366023,312,146 - 3,323,009 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CIDEC
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1366,141,838 - 66,149,703 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11366,141,836 - 66,149,801 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21373,216,901 - 73,224,864 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CIDEC
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12245,895,455 - 45,917,236 (-)NCBI
ChlSab1.1 Ensembl2245,895,249 - 45,910,658 (-)Ensembl
Vero_WHO_p1.0NW_023666041120,646,801 - 120,668,336 (+)NCBI
Cidec
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247314,474,912 - 4,484,866 (-)NCBI

Position Markers
Fsp27  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386113,424,693 - 113,424,851UniSTSGRCm38
MGSCv376113,374,687 - 113,374,845UniSTSGRCm37
Celera6115,251,657 - 115,251,815UniSTS
Cytogenetic Map6E3UniSTS
cM MapUN UniSTS
cM Map6 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690795610124795846Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96655951146633626Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
1301915Chab3_mcholesterol absorption 3 (mouse)Not determined698931748132940036Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
1357793Pnhdlc1_mplasma non-HDL cholesterol 1 (mouse)Not determined6105564822114368849Mouse
10412207Cypr5_mcytokine production 5 (mouse)Not determined6110838217144838360Mouse
10043923Bhr7_mbronchial hyperresponsiveness 7 (mouse)Not determined698242853132242977Mouse
4141699Ibdq2_minflammatory bowel disease QTL 2 (mouse)Not determined106005405120917141Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined689005405123005603Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692607306146429238Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686806805113544602Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
1357806Aaj3_manxiety in A/J 3 (mouse)Not determined6104503360136423692Mouse
13463481Mcvq14_mmean corpuscular volume QTL 14 (mouse)6111165485145165578Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687503360121503555Mouse
1301509Sluc3_msusceptibility to lung cancer 3 (mouse)Not determined6104503360127042975Mouse
11252138Clas1_mcarcinogen-induced lung adenoma susceptibility 1 (mouse)6112269957147052561Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698506837145935444Mouse
11040599Lmr4b_mleishmaniasis resistance 4b (mouse)696347325130347522Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
1301923Lith6_mlithogenic gene 6 (mouse)Not determined698717516132717715Mouse
1302131Bmd8_mbone mineral density 8 (mouse)Not determined699155128133155267Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
10043891Tilss4_mTNF-induced lethal shock susceptibility 3 (mouse)Not determined6112269957125356785Mouse
1300887Pabr1_mplasma apolipoprotein B (human) regulator 1 (mouse)Not determined6103777444136423692Mouse
1300704Cia3_mcollagen induced arthritis QTL 3 (mouse)Not determined696347325130347522Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684122513118122513Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96655951146633626Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696655951146633626Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined695004651129004738Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1065
Count of miRNA genes:445
Interacting mature miRNAs:507
Transcripts:ENSMUST00000032416, ENSMUST00000113089, ENSMUST00000113091, ENSMUST00000133348
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000032416   ⟹   ENSMUSP00000032416
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6113,424,636 - 113,435,756 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113089   ⟹   ENSMUSP00000108712
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6113,424,634 - 113,435,760 (-)Ensembl
RefSeq Acc Id: ENSMUST00000113091   ⟹   ENSMUSP00000108714
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6113,425,557 - 113,434,764 (-)Ensembl
RefSeq Acc Id: ENSMUST00000133348   ⟹   ENSMUSP00000122068
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6113,428,511 - 113,434,613 (-)Ensembl
RefSeq Acc Id: NM_001301295   ⟹   NP_001288224
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396113,401,595 - 113,412,721 (-)NCBI
GRCm386113,424,634 - 113,435,760 (-)NCBI
Celera6115,251,598 - 115,262,729 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001372264   ⟹   NP_001359193
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396113,401,595 - 113,411,725 (-)NCBI
GRCm386113,424,634 - 113,434,764 (-)NCBI
RefSeq Acc Id: NM_178373   ⟹   NP_848460
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396113,401,595 - 113,412,721 (-)NCBI
GRCm386113,424,634 - 113,435,760 (-)NCBI
MGSCv376113,374,630 - 113,385,749 (-)RGD
Celera6115,251,598 - 115,262,729 (-)NCBI
cM Map6 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_848460   ⟸   NM_178373
- Peptide Label: isoform 1
- UniProtKB: P56198 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001288224   ⟸   NM_001301295
- Peptide Label: isoform 1
- UniProtKB: P56198 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001359193   ⟸   NM_001372264
- Peptide Label: isoform 2
RefSeq Acc Id: ENSMUSP00000032416   ⟸   ENSMUST00000032416
RefSeq Acc Id: ENSMUSP00000122068   ⟸   ENSMUST00000133348
RefSeq Acc Id: ENSMUSP00000108712   ⟸   ENSMUST00000113089
RefSeq Acc Id: ENSMUSP00000108714   ⟸   ENSMUST00000113091
Protein Domains
CIDE-N

Promoters
RGD ID:6839080
Promoter ID:MM_KWN:47181
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   Liver
Transcripts:ENSMUST00000113091,   OTTMUST00000055900
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366113,384,456 - 113,385,657 (-)MPROMDB
RGD ID:6839079
Promoter ID:MM_KWN:47182
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4
Transcripts:ENSMUST00000113089,   OTTMUST00000055898
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366113,386,059 - 113,386,559 (-)MPROMDB
RGD ID:6890662
Promoter ID:EPDNEW_M8776
Type:initiation region
Name:Cidec_2
Description:Mus musculus cell death-inducing DFFA-like effector c , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8777  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm386113,434,764 - 113,434,824EPDNEW
RGD ID:6890652
Promoter ID:EPDNEW_M8777
Type:single initiation site
Name:Cidec_1
Description:Mus musculus cell death-inducing DFFA-like effector c , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M8776  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm386113,435,756 - 113,435,816EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:95585 AgrOrtholog
Ensembl Genes ENSMUSG00000030278 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000032416 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000108712 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000108714 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000122068 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000032416 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000113089 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000113091 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000133348 UniProtKB/TrEMBL
InterPro CIDE-N_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:14311 UniProtKB/Swiss-Prot
MGD MGI:95585 ENTREZGENE
NCBI Gene 14311 ENTREZGENE
Pfam CIDE-N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cidec PhenoGen
PROSITE CIDE_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART CAD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt CIDEC_MOUSE UniProtKB/Swiss-Prot
  D3Z1A6_MOUSE UniProtKB/TrEMBL
  E9QMZ0_MOUSE UniProtKB/TrEMBL
  P56198 ENTREZGENE
UniProt Secondary Q499X5 UniProtKB/Swiss-Prot
  Q8BNV7 UniProtKB/Swiss-Prot