Gm10415 (predicted gene 10415) - Rat Genome Database

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Gene: Gm10415 (predicted gene 10415) Mus musculus
Analyze
Symbol: Gm10415
Name: predicted gene 10415
RGD ID: 1624614
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: ENSMUSG00000072759
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396126,263,612 - 126,305,649 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6126,263,612 - 126,305,695 (-)EnsemblGRCm39 Ensembl
GRCm386126,286,649 - 126,328,686 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6126,286,649 - 126,328,686 (-)EnsemblGRCm38mm10GRCm38
Celera6127,952,062 - 127,993,823 (-)NCBICelera
Cytogenetic Map6F3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  


Genomics


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142079Skmw15_mskeletal muscle weight 15 (mouse)Not determined6116829851149588044Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
11252138Clas1_mcarcinogen-induced lung adenoma susceptibility 1 (mouse)6112246918146954059Mouse
10449436Pas17_mpulmonary adenoma susceptibility 17 (mouse)6124334273145601739Mouse
1300887Pabr1_mplasma apolipoprotein B (human) regulator 1 (mouse)Not determined6103754405136400690Mouse
1301915Chab3_mcholesterol absorption 3 (mouse)Not determined698908709132916997Mouse
1301083Bhr5_mbronchial hyperresponsiveness 5 (mouse)Not determined6115694477132578150Mouse
1301658Radpf3_mradiation pulmonary fibrosis 3 (mouse)Not determined6115219814146330736Mouse
10043923Bhr7_mbronchial hyperresponsiveness 7 (mouse)Not determined698219814132219938Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96632912146535124Mouse
4140980Mvwf2_mmodifier of von Willebrand factor 2 (mouse)Not determined114345693145601739Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46912919136400690Mouse
4141295Rua_mraffinose acetate tasting (mouse)Not determined115546805149549364Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648696934148351498Mouse
4141611Btts_mbitterness tasting (mouse)Not determined6125333609134096586Mouse
1301509Sluc3_msusceptibility to lung cancer 3 (mouse)Not determined6104480321127019938Mouse
1302089Wta2_mweight adult 2 (mouse)Not determined6125269523149588044Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698483798145881170Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692584287146330736Mouse
1302131Bmd8_mbone mineral density 8 (mouse)Not determined699132089133132228Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645290993128811995Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696632912146535124Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96632912146535124Mouse
1301923Lith6_mlithogenic gene 6 (mouse)Not determined698694477132694676Mouse
10412207Cypr5_mcytokine production 5 (mouse)Not determined6110815180144815323Mouse
1300704Cia3_mcollagen induced arthritis QTL 3 (mouse)Not determined696324286130324483Mouse
1301152Athsq2_matherosclerosis susceptibility QTL 2 (mouse)Not determined6117059949149588044Mouse
13463481Mcvq14_mmean corpuscular volume QTL 14 (mouse)6111142448145142541Mouse
1301927Etohcta6_methanol conditioned taste aversion 6 (mouse)Not determined6115578005149578150Mouse
4141194Cyx_mcycloheximide tasting (mouse)Not determined115546805149549364Mouse
4141064Ath37_matherosclerosis 37 (mouse)Not determined6116641858128495988Mouse
1357806Aaj3_manxiety in A/J 3 (mouse)Not determined6104480321136400690Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673476983134676963Mouse
4141889Qui_mquinine sensitivity, taste (mouse)Not determined115546805149549364Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined694981612128981699Mouse
11040599Lmr4b_mleishmaniasis resistance 4b (mouse)696324286130324483Mouse
1301804Bulb2_mbulb size 2 (mouse)Not determined6120416806149588044Mouse

Markers in Region
D6Mit256  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386126,293,091 - 126,293,215UniSTSGRCm38
MGSCv376126,243,109 - 126,243,233UniSTSGRCm37
Celera6127,958,504 - 127,958,628UniSTS
Cytogenetic Map6F3UniSTS
cM Map660.95UniSTS
Whitehead Genetic649.2UniSTS
Whitehead/MRC_RH61275.55UniSTS
Whitehead_YAC6 UniSTS
EC79RR  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm386126,301,251 - 126,301,399UniSTSGRCm38
MGSCv376126,251,269 - 126,251,417UniSTSGRCm37
Celera6127,966,388 - 127,966,536UniSTS
cM Map661.0UniSTS


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000204181
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6126,263,612 - 126,305,649 (-)Ensembl
GRCm38.p6 Ensembl6126,286,649 - 126,328,686 (-)Ensembl
Ensembl Acc Id: ENSMUST00000300802
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6126,264,667 - 126,305,695 (-)Ensembl
Ensembl Acc Id: ENSMUST00000300803
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6126,264,671 - 126,305,676 (-)Ensembl
Ensembl Acc Id: ENSMUST00000300804
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6126,264,710 - 126,305,640 (-)Ensembl
Ensembl Acc Id: ENSMUST00000300805
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6126,265,853 - 126,305,676 (-)Ensembl
Ensembl Acc Id: ENSMUST00000300806
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6126,273,659 - 126,305,676 (-)Ensembl
Ensembl Acc Id: ENSMUST00000300807
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6126,302,863 - 126,305,673 (-)Ensembl
Ensembl Acc Id: ENSMUST00000300808
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6126,302,835 - 126,303,882 (-)Ensembl
RefSeq Acc Id: NR_045480
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396126,263,612 - 126,305,649 (-)NCBI
GRCm386126,286,649 - 126,328,686 (-)ENTREZGENE
Celera6127,952,062 - 127,993,823 (-)ENTREZGENE
cM Map6 ENTREZGENE
Sequence:
Protein Sequences
GenBank Protein BAE21462 (Get FASTA)   NCBI Sequence Viewer  


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000107623 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000204181 ENTREZGENE
MGD MGI:3641661 ENTREZGENE
NCBI Gene 100038574 ENTREZGENE
PhenoGen Gm10415 PhenoGen
RNAcentral URS000075B89C RNACentral
UniProt Q3V0P2_MOUSE UniProtKB/TrEMBL