Bhlhe40 (basic helix-loop-helix family, member e40) - Rat Genome Database
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Gene: Bhlhe40 (basic helix-loop-helix family, member e40) Mus musculus
Analyze
Symbol: Bhlhe40
Name: basic helix-loop-helix family, member e40
RGD ID: 68660
MGI Page MGI
Description: Is expressed in several structures, including brain; early conceptus; embryo mesenchyme; genitourinary system; and lower leg. Orthologous to human BHLHE40 (basic helix-loop-helix family member e40).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: basic helix-loop-helix domain containing, class B2; Bhlhb; Bhlhb2; C130042M06Rik; Cla; class B basic helix-loop-helix protein 2; class E basic helix-loop-helix protein 40; Clast5; CR; CR8; cytokine response gene 8; Dec1; differentially expressed in chondrocytes protein 1; E47 interaction protein 1; eip1 (E47 interaction protein 1); Sh; Sharp2; stimulated by retinoic acid gene 13 protein; Str; Stra13; Stra14
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396108,637,590 - 108,643,886 (+)NCBIGRCm39mm39
GRCm39 Ensembl6108,637,590 - 108,643,886 (+)Ensembl
GRCm386108,660,629 - 108,666,925 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6108,660,629 - 108,666,925 (+)EnsemblGRCm38mm10GRCm38
MGSCv376108,610,623 - 108,616,919 (+)NCBIGRCm37mm9NCBIm37
MGSCv366108,626,406 - 108,632,702 (+)NCBImm8
Celera6110,461,756 - 110,468,060 (+)NCBICelera
Cytogenetic Map6E2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane  (ISO)
1,2-dimethylhydrazine  (EXP)
1,3-dinitrobenzene  (ISO)
1-naphthyl isothiocyanate  (ISO)
15-acetyldeoxynivalenol  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3-dimethoxynaphthalene-1,4-dione  (ISO)
2,4-dinitrotoluene  (ISO)
2-butoxyethanol  (EXP)
2-hydroxypropanoic acid  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-hydroxynon-2-enal  (EXP)
4-hydroxyphenyl retinamide  (EXP,ISO)
5-aza-2'-deoxycytidine  (ISO)
6-propyl-2-thiouracil  (ISO)
acetaldehyde  (ISO)
acrylamide  (ISO)
afimoxifene  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (EXP,ISO)
amiodarone  (ISO)
ammonium chloride  (ISO)
Aroclor 1254  (EXP,ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
Azaspiracid  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
bromobenzene  (ISO)
buspirone  (ISO)
butan-1-ol  (ISO)
cadmium dichloride  (ISO)
cadmium sulfate  (ISO)
captan  (EXP)
carbamazepine  (ISO)
carbon nanotube  (EXP)
chloroacetaldehyde  (ISO)
chloropicrin  (ISO)
chloroprene  (ISO)
chlorpromazine  (ISO)
chromium atom  (ISO)
chrysene  (EXP)
cisplatin  (EXP,ISO)
clobetasol  (EXP)
clofibrate  (EXP)
cobalt dichloride  (ISO)
cocaine  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (ISO)
cyclosporin A  (ISO)
dexamethasone  (EXP,ISO)
diarsenic trioxide  (ISO)
dibenz[a,h]anthracene  (EXP)
dibutyl phthalate  (EXP,ISO)
dichloroacetic acid  (EXP)
dichloromethane  (EXP)
diethylstilbestrol  (EXP)
dioxygen  (EXP,ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
Enterolactone  (ISO)
ethanol  (ISO)
fenofibrate  (ISO)
ferric oxide  (EXP)
flutamide  (ISO)
fluvastatin  (ISO)
folic acid  (EXP,ISO)
folpet  (EXP)
formaldehyde  (ISO)
furan  (ISO)
gamma-hexachlorocyclohexane  (ISO)
genistein  (EXP,ISO)
glafenine  (ISO)
glycine betaine  (ISO)
Heptachlor epoxide  (EXP)
hypochlorous acid  (EXP)
ifosfamide  (ISO)
indole-3-methanol  (ISO)
indometacin  (ISO)
isobutanol  (ISO)
isotretinoin  (ISO)
ketamine  (ISO)
lead(0)  (ISO)
lead(2+)  (ISO)
lead(II) chloride  (ISO)
leflunomide  (ISO)
lipopolysaccharide  (ISO)
manganese(II) chloride  (ISO)
mercury atom  (ISO)
mercury dibromide  (ISO)
mercury(0)  (ISO)
metformin  (ISO)
methotrexate  (ISO)
methoxsalen  (ISO)
methylmercury chloride  (ISO)
methylparaben  (ISO)
N-methyl-4-phenylpyridinium  (EXP)
N1'-[2-[[5-[(dimethylamino)methyl]-2-furanyl]methylthio]ethyl]-N1-methyl-2-nitroethene-1,1-diamine  (ISO)
nickel sulfate  (ISO)
nimesulide  (ISO)
oxaliplatin  (ISO)
ozone  (ISO)
p-chloromercuribenzoic acid  (ISO)
panobinostat  (ISO)
paracetamol  (ISO)
phenformin  (ISO)
phenobarbital  (EXP)
phenol  (ISO)
phenylmercury acetate  (ISO)
phosgene  (EXP)
pirinixic acid  (EXP)
potassium chromate  (ISO)
potassium dichromate  (ISO)
progesterone  (ISO)
quercetin  (ISO)
quinolin-8-ol  (ISO)
rac-lactic acid  (ISO)
ranitidine  (ISO)
resorcinol  (ISO)
resveratrol  (ISO)
rifampicin  (ISO)
rotenone  (ISO)
SB 431542  (ISO)
silicon dioxide  (EXP,ISO)
silver atom  (EXP,ISO)
silver(0)  (EXP,ISO)
sodium arsenite  (EXP)
sodium dichromate  (EXP)
styrene  (EXP)
sulforaphane  (ISO)
sunitinib  (ISO)
tamibarotene  (ISO)
tamoxifen  (ISO)
tetraphene  (EXP)
thapsigargin  (ISO)
thimerosal  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
trichostatin A  (ISO)
triclosan  (ISO)
troglitazone  (ISO)
trovafloxacin  (EXP)
tunicamycin  (ISO)
undecane  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)
vorinostat  (ISO)
Yessotoxin  (ISO)
zinc dichloride  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
nuclear body  (ISO)
nucleoplasm  (TAS)
nucleus  (IBA,IDA,ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal CD4-positive T cell differentiation  (IAGP)
abnormal CD4-positive, alpha-beta T cell physiology  (IAGP)
abnormal circadian behavior  (IAGP)
abnormal immune system cell morphology  (IAGP)
abnormal immune system physiology  (IAGP)
abnormal lymph node germinal center morphology  (IAGP)
abnormal renal glomerulus morphology  (IAGP)
abnormal susceptibility to autoimmune disorder  (IAGP)
abnormal T cell activation  (IAGP)
convulsive seizures  (IEA)
decreased circulating calcium level  (IEA)
decreased circulating cholesterol level  (IEA)
decreased circulating glycerol level  (IEA)
decreased circulating HDL cholesterol level  (IEA)
decreased double-positive T cell number  (IAGP)
decreased fasting circulating glucose level  (IEA)
decreased interleukin-2 secretion  (IAGP)
decreased T cell proliferation  (IAGP)
decreased total body fat amount  (IEA)
delayed circadian behavior phase  (IAGP)
impaired glucose tolerance  (IEA)
increased anti-nuclear antigen antibody level  (IAGP)
increased bone mineral content  (IEA)
increased bone mineral density  (IEA)
increased CD4-positive, alpha beta T cell number  (IAGP)
increased CD8-positive, alpha-beta T cell number  (IAGP)
increased double-negative T cell number  (IAGP)
increased IgE level  (IAGP)
increased IgG1 level  (IAGP)
increased lean body mass  (IEA)
increased spleen germinal center number  (IAGP)
increased spleen white pulp amount  (IAGP)
increased susceptibility to pharmacologically induced seizures  (IAGP)
lymph node hyperplasia  (IAGP)
spleen hyperplasia  (IAGP)
thymus hyperplasia  (IAGP)
References

Additional References at PubMed
PMID:7649373   PMID:9050988   PMID:9284045   PMID:10349636   PMID:10702671   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11313924   PMID:11668339   PMID:11879638   PMID:11890681  
PMID:12297495   PMID:12384505   PMID:12477932   PMID:12594185   PMID:12657651   PMID:14581485   PMID:14672706   PMID:15038852   PMID:15108316   PMID:15147242   PMID:15196947   PMID:15465485  
PMID:15472070   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16267380   PMID:16602821   PMID:16878149   PMID:17347673   PMID:17487425   PMID:17502421   PMID:18234890   PMID:18287559  
PMID:18342625   PMID:18411297   PMID:18648504   PMID:18665267   PMID:18799693   PMID:19029909   PMID:19032342   PMID:19208226   PMID:19620969   PMID:19679564   PMID:19786558   PMID:20059953  
PMID:20211142   PMID:20368287   PMID:20412781   PMID:21040902   PMID:21057086   PMID:21267068   PMID:21506129   PMID:21677750   PMID:21873635   PMID:22080784   PMID:22215611   PMID:22244086  
PMID:22569553   PMID:22610404   PMID:22905217   PMID:23229312   PMID:23638021   PMID:23878307   PMID:24397494   PMID:24699451   PMID:24952961   PMID:24993831   PMID:25336743   PMID:25340473  
PMID:25352248   PMID:25690852   PMID:25963661   PMID:26100875   PMID:26416771   PMID:26468276   PMID:26498531   PMID:26525672   PMID:26697751   PMID:26834156   PMID:27100196   PMID:27178982  
PMID:27226296   PMID:28067313   PMID:28250425   PMID:28408345   PMID:28734031   PMID:29277702   PMID:29438518   PMID:29715265   PMID:29773643   PMID:29773644   PMID:29882288   PMID:29952285  
PMID:30012868   PMID:31061528   PMID:31414712   PMID:31533057   PMID:31597354   PMID:31880771   PMID:31900338   PMID:31991027   PMID:33238123  


Genomics

Comparative Map Data
Bhlhe40
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396108,637,590 - 108,643,886 (+)NCBIGRCm39mm39
GRCm39 Ensembl6108,637,590 - 108,643,886 (+)Ensembl
GRCm386108,660,629 - 108,666,925 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6108,660,629 - 108,666,925 (+)EnsemblGRCm38mm10GRCm38
MGSCv376108,610,623 - 108,616,919 (+)NCBIGRCm37mm9NCBIm37
MGSCv366108,626,406 - 108,632,702 (+)NCBImm8
Celera6110,461,756 - 110,468,060 (+)NCBICelera
Cytogenetic Map6E2NCBI
BHLHE40
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl34,979,437 - 4,985,323 (+)EnsemblGRCh38hg38GRCh38
GRCh3834,979,420 - 4,985,323 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh3735,021,122 - 5,027,008 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3634,996,208 - 5,001,861 (+)NCBINCBI36hg18NCBI36
Build 3434,996,207 - 5,001,861NCBI
Celera34,959,047 - 4,964,811 (+)NCBI
Cytogenetic Map3p26.1NCBI
HuRef34,954,421 - 4,960,188 (+)NCBIHuRef
CHM1_134,971,113 - 4,976,884 (+)NCBICHM1_1
Bhlhe40
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.24141,618,453 - 141,624,154 (+)NCBI
Rnor_6.0 Ensembl4140,703,619 - 140,709,319 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.04140,703,619 - 140,709,319 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.04205,170,129 - 205,175,829 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.44144,139,486 - 144,145,186 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.14144,384,326 - 144,390,027 (+)NCBI
Celera4130,269,971 - 130,275,671 (+)NCBICelera
Cytogenetic Map4q41NCBI
Bhlhe40
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554218,463,018 - 8,468,877 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554218,463,337 - 8,468,877 (-)NCBIChiLan1.0ChiLan1.0
BHLHE40
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.135,028,217 - 5,033,968 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl35,028,515 - 5,032,470 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v034,927,487 - 4,933,215 (+)NCBIMhudiblu_PPA_v0panPan3
BHLHE40
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2012,642,702 - 12,647,525 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12012,641,872 - 12,647,519 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Bhlhe40
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365774,316,099 - 4,321,193 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BHLHE40
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1361,526,197 - 61,533,686 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11361,526,121 - 61,533,686 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21367,830,821 - 67,836,984 (+)NCBISscrofa10.2Sscrofa10.2susScr3
BHLHE40
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12241,049,673 - 41,055,365 (+)NCBI
ChlSab1.1 Ensembl2241,049,712 - 41,055,360 (+)Ensembl
Bhlhe40
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462477315,413,400 - 15,418,220 (+)NCBI


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
25440480Moaq2_mmodifier of alien QTL 2 (mouse)61117500000Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139100000Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645314059128835032Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46935985136423692Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648720000125360000Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648720000148450000Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648726556125356785Mouse
1357683Igf1sl1_mIGF-1 serum levels 1 (mouse)Not determined652161713116155267Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673500000134700000Mouse
10043901Pfat5_mpredicted fat percentage 5 (mouse)Not determined675607306109607450Mouse
10412208Cypr4_mcytokine production 4 (mouse)Not determined675716503109716697Mouse
1357875Pfat2_mpredicted fat percentage 2 (mouse)Not determined676463949110464093Mouse
4141376Dbm1_mdiabetes modifier 1 (mouse)Not determined678629504121115387Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683713869147052561Mouse
11251720Ewc4_methanol withdrawal and consumption 4 (mouse)684122513118122513Mouse
1301687Mnic2_mmacronutrient intake (mouse)Not determined686806805113544602Mouse
1301744Hdlq11_mHDL QTL 11 (mouse)Not determined687503360121503555Mouse
1301262Gasa3_mgastritis type A susceptibility locus 3 (mouse)Not determined689005405123005603Mouse
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690795610124795846Mouse
4141578Obrq1_mobesity resistance QTL 1 (mouse)Not determined92607306112004738Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692607306146429238Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined695004651129004738Mouse
1300704Cia3_mcollagen induced arthritis QTL 3 (mouse)Not determined696347325130347522Mouse
11040599Lmr4b_mleishmaniasis resistance 4b (mouse)696347325130347522Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96655951146633626Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96655951146633626Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696655951146633626Mouse
10043923Bhr7_mbronchial hyperresponsiveness 7 (mouse)Not determined698242853132242977Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698506837145935444Mouse
1301923Lith6_mlithogenic gene 6 (mouse)Not determined698717516132717715Mouse
1301915Chab3_mcholesterol absorption 3 (mouse)Not determined698931748132940036Mouse
1302131Bmd8_mbone mineral density 8 (mouse)Not determined699155128133155267Mouse
1300887Pabr1_mplasma apolipoprotein B (human) regulator 1 (mouse)Not determined6103777444136423692Mouse
12910776Hcga4b_mhome cage activity 4b (mouse)6104503360110960065Mouse
1301509Sluc3_msusceptibility to lung cancer 3 (mouse)Not determined6104503360127042975Mouse
1357806Aaj3_manxiety in A/J 3 (mouse)Not determined6104503360136423692Mouse
1357793Pnhdlc1_mplasma non-HDL cholesterol 1 (mouse)Not determined6105564822114368849Mouse
4141699Ibdq2_minflammatory bowel disease QTL 2 (mouse)Not determined106005405120917141Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1640
Count of miRNA genes:698
Interacting mature miRNAs:897
Transcripts:ENSMUST00000032194, ENSMUST00000163617, ENSMUST00000166346
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000032194   ⟹   ENSMUSP00000032194
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6108,660,629 - 108,666,925 (+)Ensembl
RefSeq Acc Id: ENSMUST00000163617   ⟹   ENSMUSP00000132157
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6108,660,874 - 108,662,699 (+)Ensembl
RefSeq Acc Id: ENSMUST00000166346
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6108,660,799 - 108,661,334 (+)Ensembl
RefSeq Acc Id: ENSMUST00000204550
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl6108,663,046 - 108,665,665 (+)Ensembl
RefSeq Acc Id: NM_011498   ⟹   NP_035628
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396108,637,590 - 108,643,886 (+)NCBI
GRCm386108,660,629 - 108,666,925 (+)ENTREZGENE
MGSCv376108,610,623 - 108,616,919 (+)RGD
Celera6110,461,756 - 110,468,060 (+)RGD
cM Map6 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_035628   ⟸   NM_011498
- UniProtKB: O35185 (UniProtKB/Swiss-Prot),   Q542A5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000032194   ⟸   ENSMUST00000032194
RefSeq Acc Id: ENSMUSP00000132157   ⟸   ENSMUST00000163617
Protein Domains
bHLH   Orange

Promoters
RGD ID:6838988
Promoter ID:MM_KWN:47106
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   MEF_B4,   MEF_B6
Transcripts:NM_011498
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv366108,609,656 - 108,610,802 (+)MPROMDB
RGD ID:6890586
Promoter ID:EPDNEW_M8744
Type:initiation region
Name:Bhlhe40_1
Description:Mus musculus basic helix-loop-helix family, member e40 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm386108,660,663 - 108,660,723EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1097714 AgrOrtholog
Ensembl Genes ENSMUSG00000030103 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000032194 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000132157 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000032194 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000163617 UniProtKB/TrEMBL
Gene3D-CATH 4.10.280.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro bHLH_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HLH_DNA-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Orange_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:20893 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1097714 ENTREZGENE
NCBI Gene 20893 ENTREZGENE
Pfam Hairy_orange UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HLH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Bhlhe40 PhenoGen
PROSITE BHLH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ORANGE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART HLH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ORANGE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47459 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt BHE40_MOUSE UniProtKB/Swiss-Prot
  E9Q2C3_MOUSE UniProtKB/TrEMBL
  O35185 ENTREZGENE
  Q52L58_MOUSE UniProtKB/TrEMBL
  Q542A5 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary P97289 UniProtKB/Swiss-Prot