Shq1 (Mus musculus - house mouse) |
Mouse Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCm39 | 6 | 100,548,772 - 100,648,135 (-) | NCBI | GRCm39 | GRCm39 | mm39 | | GRCm39 Ensembl | 6 | 100,545,217 - 100,648,118 (-) | Ensembl | | GRCm39 Ensembl | | | GRCm38 | 6 | 100,571,811 - 100,671,183 (-) | NCBI | GRCm38 | GRCm38 | mm10 | GRCm38 | GRCm38.p6 Ensembl | 6 | 100,568,256 - 100,671,157 (-) | Ensembl | GRCm38 | | mm10 | GRCm38 | MGSCv37 | 6 | 100,523,076 - 100,621,151 (-) | NCBI | GRCm37 | MGSCv37 | mm9 | NCBIm37 | MGSCv36 | 6 | 100,539,181 - 100,637,239 (-) | NCBI | | MGSCv36 | mm8 | | Celera | 6 | 102,439,542 - 102,537,888 (-) | NCBI | | Celera | | | Cytogenetic Map | 6 | D3 | NCBI | | | | | cM Map | 6 | 46.82 | NCBI | | | | |
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SHQ1 (Homo sapiens - human) |
Human Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCh38 | 3 | 72,725,272 - 72,848,445 (-) | NCBI | GRCh38 | GRCh38 | hg38 | GRCh38 | GRCh38.p14 Ensembl | 3 | 72,749,277 - 72,861,914 (-) | Ensembl | GRCh38 | | hg38 | GRCh38 | GRCh37 | 3 | 72,798,428 - 72,897,596 (-) | NCBI | GRCh37 | GRCh37 | hg19 | GRCh37 | Build 36 | 3 | 72,881,118 - 72,980,288 (-) | NCBI | NCBI36 | Build 36 | hg18 | NCBI36 | Build 34 | 3 | 72,881,119 - 72,980,288 | NCBI | | | | | Celera | 3 | 72,732,591 - 72,831,743 (-) | NCBI | | Celera | | | Cytogenetic Map | 3 | p13 | NCBI | | | | | HuRef | 3 | 72,801,901 - 72,901,021 (-) | NCBI | | HuRef | | | CHM1_1 | 3 | 72,751,223 - 72,850,430 (-) | NCBI | | CHM1_1 | | | T2T-CHM13v2.0 | 3 | 72,766,887 - 72,890,317 (-) | NCBI | | T2T-CHM13v2.0 | | |
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Shq1 (Rattus norvegicus - Norway rat) |
Rat Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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GRCr8 | 4 | 134,741,190 - 134,861,960 (-) | NCBI | | GRCr8 | | | mRatBN7.2 | 4 | 133,213,357 - 133,305,586 (-) | NCBI | mRatBN7.2 | mRatBN7.2 | | | mRatBN7.2 Ensembl | 4 | 133,213,361 - 133,305,586 (-) | Ensembl | | mRatBN7.2 Ensembl | | | UTH_Rnor_SHR_Utx | 4 | 138,619,611 - 138,712,091 (-) | NCBI | Rnor_SHR | UTH_Rnor_SHR_Utx | | | UTH_Rnor_SHRSP_BbbUtx_1.0 | 4 | 134,400,393 - 134,492,872 (-) | NCBI | Rnor_SHRSP | UTH_Rnor_SHRSP_BbbUtx_1.0 | | | UTH_Rnor_WKY_Bbb_1.0 | 4 | 133,018,641 - 133,111,122 (-) | NCBI | Rnor_WKY | UTH_Rnor_WKY_Bbb_1.0 | | | Rnor_6.0 | 4 | 133,131,711 - 133,133,170 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 | 4 | 133,037,515 - 133,127,183 (-) | NCBI | Rnor6.0 | Rnor_6.0 | rn6 | Rnor6.0 | Rnor_6.0 Ensembl | 4 | 133,037,014 - 133,131,953 (-) | Ensembl | Rnor6.0 | | rn6 | Rnor6.0 | Rnor_5.0 | 4 | 197,520,935 - 197,610,595 (-) | NCBI | Rnor5.0 | Rnor_5.0 | rn5 | Rnor5.0 | RGSC_v3.4 | 4 | 135,478,202 - 135,571,298 (-) | NCBI | RGSC3.4 | RGSC_v3.4 | rn4 | RGSC3.4 | RGSC_v3.1 | 4 | 135,716,517 - 135,821,308 (-) | NCBI | | | | | Celera | 4 | 122,058,308 - 122,150,570 (-) | NCBI | | Celera | | | Cytogenetic Map | 4 | q34 | NCBI | | | | |
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Shq1 (Chinchilla lanigera - long-tailed chinchilla) |
Chinchilla Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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ChiLan1.0 Ensembl | NW_004955421 | 15,358,221 - 15,457,097 (+) | Ensembl | ChiLan1.0 | | | | ChiLan1.0 | NW_004955421 | 15,358,387 - 15,455,534 (+) | NCBI | ChiLan1.0 | ChiLan1.0 | | |
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SHQ1 (Pan paniscus - bonobo/pygmy chimpanzee) |
Bonobo Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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NHGRI_mPanPan1-v2 | 2 | 72,707,607 - 72,808,233 (-) | NCBI | | NHGRI_mPanPan1-v2 | | | NHGRI_mPanPan1 | 3 | 72,712,395 - 72,812,355 (-) | NCBI | | NHGRI_mPanPan1 | | | Mhudiblu_PPA_v0 | 3 | 72,692,338 - 72,791,784 (-) | NCBI | Mhudiblu_PPA_v0 | Mhudiblu_PPA_v0 | panPan3 | | PanPan1.1 | 3 | 74,619,864 - 74,718,948 (-) | NCBI | panpan1.1 | PanPan1.1 | panPan2 | | PanPan1.1 Ensembl | 3 | 74,619,864 - 74,718,948 (-) | Ensembl | panpan1.1 | | panPan2 | |
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SHQ1 (Canis lupus familiaris - dog) |
Dog Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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CanFam3.1 | 20 | 19,304,839 - 19,406,662 (+) | NCBI | CanFam3.1 | CanFam3.1 | canFam3 | CanFam3.1 | CanFam3.1 Ensembl | 20 | 19,304,934 - 19,405,950 (+) | Ensembl | CanFam3.1 | | canFam3 | CanFam3.1 | Dog10K_Boxer_Tasha | 20 | 19,283,815 - 19,385,285 (+) | NCBI | | Dog10K_Boxer_Tasha | | | ROS_Cfam_1.0 | 20 | 19,340,247 - 19,442,546 (+) | NCBI | | ROS_Cfam_1.0 | | | ROS_Cfam_1.0 Ensembl | 20 | 19,340,246 - 19,442,541 (+) | Ensembl | | ROS_Cfam_1.0 Ensembl | | | UMICH_Zoey_3.1 | 20 | 19,027,021 - 19,128,703 (+) | NCBI | | UMICH_Zoey_3.1 | | | UNSW_CanFamBas_1.0 | 20 | 19,369,028 - 19,470,788 (+) | NCBI | | UNSW_CanFamBas_1.0 | | | UU_Cfam_GSD_1.0 | 20 | 19,440,373 - 19,542,402 (+) | NCBI | | UU_Cfam_GSD_1.0 | | |
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Shq1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
Squirrel Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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HiC_Itri_2 | NW_024404942 | 3,831,838 - 3,900,478 (-) | NCBI | | HiC_Itri_2 | | | SpeTri2.0 Ensembl | NW_004936603 | 3,831,018 - 3,900,971 (-) | Ensembl | SpeTri2.0 | SpeTri2.0 Ensembl | | | SpeTri2.0 | NW_004936603 | 3,831,838 - 3,900,429 (-) | NCBI | SpeTri2.0 | SpeTri2.0 | | SpeTri2.0 |
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SHQ1 (Sus scrofa - pig) |
Pig Assembly | Chr | Position (strand) | Source | Genome Browsers |
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JBrowse | NCBI | UCSC | Ensembl |
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Sscrofa11.1 Ensembl | 13 | 54,071,659 - 54,180,750 (-) | Ensembl | Sscrofa11.1 | | susScr11 | Sscrofa11.1 | Sscrofa11.1 | 13 | 54,073,012 - 54,180,759 (-) | NCBI | Sscrofa11.1 | Sscrofa11.1 | susScr11 | Sscrofa11.1 | Sscrofa10.2 | 13 | 59,745,978 - 59,900,437 (-) | NCBI | Sscrofa10.2 | Sscrofa10.2 | susScr3 | |
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SHQ1 (Chlorocebus sabaeus - green monkey) |
Green Monkey Assembly | Chr | Position (strand) | Source | Genome Browsers |
---|
JBrowse | NCBI | UCSC | Ensembl |
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ChlSab1.1 | 22 | 33,691,625 - 33,799,128 (-) | NCBI | ChlSab1.1 | ChlSab1.1 | chlSab2 | | ChlSab1.1 Ensembl | 22 | 33,691,120 - 33,795,450 (-) | Ensembl | ChlSab1.1 | ChlSab1.1 Ensembl | chlSab2 | | Vero_WHO_p1.0 | NW_023666041 | 132,968,901 - 133,077,325 (+) | NCBI | Vero_WHO_p1.0 | Vero_WHO_p1.0 | | |
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Shq1 (Heterocephalus glaber - naked mole-rat) |
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