4930425L21Rik (RIKEN cDNA 4930425L21 gene) - Rat Genome Database

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Gene: 4930425L21Rik (RIKEN cDNA 4930425L21 gene) Mus musculus
Analyze
Symbol: 4930425L21Rik
Name: RIKEN cDNA 4930425L21 gene
RGD ID: 1609201
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: VALIDATED
Previously known as: 4930473P14Rik; hypothetical protein LOC75024; uncharacterized protein LOC75024
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396135,635,911 - 135,660,389 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6135,503,571 - 135,661,572 (+)EnsemblGRCm39 Ensembl
GRCm386135,658,913 - 135,683,391 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6135,658,913 - 135,684,527 (+)EnsemblGRCm38mm10GRCm38
Celera6138,610,265 - 138,632,215 (+)NCBICelera
Cytogenetic Map6G1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073  


Genomics

Variants

.
Variants in 4930425L21Rik
1370 total Variants

QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142079Skmw15_mskeletal muscle weight 15 (mouse)Not determined6116829851149588044Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
11252138Clas1_mcarcinogen-induced lung adenoma susceptibility 1 (mouse)6112246918146954059Mouse
10449437Pas15_mpulmonary adenoma susceptibility 15 (mouse)6128180868149588044Mouse
10449436Pas17_mpulmonary adenoma susceptibility 17 (mouse)6124334273145601739Mouse
1300887Pabr1_mplasma apolipoprotein B (human) regulator 1 (mouse)Not determined6103754405136400690Mouse
1301658Radpf3_mradiation pulmonary fibrosis 3 (mouse)Not determined6115219814146330736Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96632912146535124Mouse
4140980Mvwf2_mmodifier of von Willebrand factor 2 (mouse)Not determined114345693145601739Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46912919136400690Mouse
1301084Bpq5_mblood pressure QTL 5 (mouse)Not determined6129330484149588044Mouse
14746990Manh61_mmandible shape 61 (mouse)6130156355149588044Mouse
4141295Rua_mraffinose acetate tasting (mouse)Not determined115546805149549364Mouse
10766452Sle23_msystematic lupus erythematosus susceptibility 23 (mouse)6128601582149588044Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648696934148351498Mouse
14746999Mancz6_mmandible centroid size 6 (mouse)6130156355149588044Mouse
1302089Wta2_mweight adult 2 (mouse)Not determined6125269523149588044Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698483798145881170Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692584287146330736Mouse
4141151Ath38_matherosclerosis 38 (mouse)Not determined128495857136293176Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
1301686Trmq1_mT cell ratio modifier QTL 1 (mouse)Not determined6129330484149588044Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696632912146535124Mouse
1301620Insq8_minsulin QTL 8 (mouse)Not determined6129534979149588044Mouse
12879916Shm5_msperm head morphology 5 (mouse)6132266532145601739Mouse
10053680Lith25_mlithogenic gene 25 (mouse)Not determined6128601582149588044Mouse
10412215Cmv3_mcytomegalovirus resistance 3 (mouse)Not determined6128811857137416927Mouse
4141974Skmw14_mskeletal muscle weight 14 (mouse)Not determined6129330484149588044Mouse
12910121Lvic3_mliver iron content 3 (mouse)6134096413136022150Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96632912146535124Mouse
1301820Mop1_mmorphine preference 1 (mouse)Not determined6132578005146330736Mouse
1301027Hdlq12_mHDL QTL 12 (mouse)Not determined6128601582149588044Mouse
10412207Cypr5_mcytokine production 5 (mouse)Not determined6110815180144815323Mouse
1301152Athsq2_matherosclerosis susceptibility QTL 2 (mouse)Not determined6117059949149588044Mouse
13463481Mcvq14_mmean corpuscular volume QTL 14 (mouse)6111142448145142541Mouse
1301927Etohcta6_methanol conditioned taste aversion 6 (mouse)Not determined6115578005149578150Mouse
4141194Cyx_mcycloheximide tasting (mouse)Not determined115546805149549364Mouse
10412134Cmv4_mcytomegalovirus resistance 4 (mouse)Not determined6127815180136022150Mouse
1558959Eamcd2_mexperimental autoimmune myocarditis 2 (mouse)Not determined6129953954149588044Mouse
1357806Aaj3_manxiety in A/J 3 (mouse)Not determined6104480321136400690Mouse
4141889Qui_mquinine sensitivity, taste (mouse)Not determined115546805149549364Mouse
1301804Bulb2_mbulb size 2 (mouse)Not determined6120416806149588044Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000203439
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,635,909 - 135,661,525 (+)Ensembl
GRCm38.p6 Ensembl6135,679,637 - 135,684,527 (+)Ensembl
Ensembl Acc Id: ENSMUST00000205073
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,635,908 - 135,661,572 (+)Ensembl
GRCm38.p6 Ensembl6135,658,913 - 135,683,391 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304814
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,503,680 - 135,660,764 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304815
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,503,654 - 135,626,515 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304816
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,503,664 - 135,626,517 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304817
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,503,681 - 135,612,698 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304818
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,503,636 - 135,562,824 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304819
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,568,737 - 135,626,515 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304820
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,503,719 - 135,561,263 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304821
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,539,915 - 135,561,253 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304822
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,635,920 - 135,657,210 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304823
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,637,750 - 135,657,210 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304824
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,635,909 - 135,647,565 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304825
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,635,909 - 135,647,565 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304826
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,503,623 - 135,508,771 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304827
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,559,900 - 135,561,251 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304828
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,635,904 - 135,636,999 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304829
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,635,908 - 135,636,999 (+)Ensembl
Ensembl Acc Id: ENSMUST00000304830
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6135,503,571 - 135,504,055 (+)Ensembl
RefSeq Acc Id: NR_126088
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396135,635,911 - 135,660,389 (+)NCBI
GRCm386135,658,913 - 135,683,391 (+)NCBI
Celera6138,610,265 - 138,632,215 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSMUSG00000107396 Ensembl
MGD MGI:1925379 ENTREZGENE
NCBI Gene 4930425L21Rik ENTREZGENE
PhenoGen 4930425L21Rik PhenoGen
RNAcentral URS00007E46E9 RNACentral