Gm26653 (predicted gene, 26653) - Rat Genome Database

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Gene: Gm26653 (predicted gene, 26653) Mus musculus
Analyze
Symbol: Gm26653
Name: predicted gene, 26653
RGD ID: 9623450
MGI Page MGI
Description:
Type: ncrna (Ensembl: lncRNA)
RefSeq Status: MODEL
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396136,150,026 - 136,152,708 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6136,149,093 - 136,152,685 (+)EnsemblGRCm39 Ensembl
GRCm386136,173,028 - 136,175,710 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6136,173,061 - 136,175,664 (+)EnsemblGRCm38mm10GRCm38
Cytogenetic Map6G1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:16141072   PMID:16141073   PMID:24316575  



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Variants in Gm26653
245 total Variants

Predicted Target Of
Summary Value
Count of predictions:82
Count of miRNA genes:82
Interacting mature miRNAs:82
Transcripts:ENSMUST00000181537
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 40 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
4142079Skmw15_mskeletal muscle weight 15 (mouse)Not determined6116829851149588044Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
11252138Clas1_mcarcinogen-induced lung adenoma susceptibility 1 (mouse)6112246918146954059Mouse
10449437Pas15_mpulmonary adenoma susceptibility 15 (mouse)6128180868149588044Mouse
10449436Pas17_mpulmonary adenoma susceptibility 17 (mouse)6124334273145601739Mouse
1300887Pabr1_mplasma apolipoprotein B (human) regulator 1 (mouse)Not determined6103754405136400690Mouse
1301658Radpf3_mradiation pulmonary fibrosis 3 (mouse)Not determined6115219814146330736Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96632912146535124Mouse
4140980Mvwf2_mmodifier of von Willebrand factor 2 (mouse)Not determined114345693145601739Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46912919136400690Mouse

1 to 10 of 40 rows






Ensembl Acc Id: ENSMUST00000181537
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,149,512 - 136,152,672 (+)Ensembl
GRCm38.p6 Ensembl6136,173,061 - 136,175,664 (+)Ensembl
Ensembl Acc Id: ENSMUST00000273520
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,149,093 - 136,152,673 (+)Ensembl
Ensembl Acc Id: ENSMUST00000273521
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,149,497 - 136,152,677 (+)Ensembl
Ensembl Acc Id: ENSMUST00000273522
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,149,499 - 136,152,673 (+)Ensembl
Ensembl Acc Id: ENSMUST00000273523
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,149,553 - 136,152,673 (+)Ensembl
Ensembl Acc Id: ENSMUST00000273524
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,149,656 - 136,152,668 (+)Ensembl
Ensembl Acc Id: ENSMUST00000273525
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,149,872 - 136,152,677 (+)Ensembl
Ensembl Acc Id: ENSMUST00000273526
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,149,897 - 136,152,685 (+)Ensembl
Ensembl Acc Id: ENSMUST00000273527
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,149,886 - 136,152,673 (+)Ensembl
Ensembl Acc Id: ENSMUST00000273528
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,149,883 - 136,152,668 (+)Ensembl
Ensembl Acc Id: ENSMUST00000273529
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6136,150,634 - 136,152,677 (+)Ensembl
RefSeq Acc Id: XR_378074
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396136,150,026 - 136,152,708 (+)NCBI
GRCm386136,173,028 - 136,175,710 (+)NCBI
Sequence:
RefSeq Acc Id: XR_869508
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396136,150,037 - 136,152,708 (+)NCBI
GRCm386136,173,039 - 136,175,710 (+)NCBI
Sequence:


Database
Acc Id
Source(s)
Ensembl Genes ENSMUSG00000097496 Ensembl, ENTREZGENE
Ensembl Transcript ENSMUST00000273525 ENTREZGENE
  ENSMUST00000273526 ENTREZGENE
MGD MGI:5477147 ENTREZGENE
NCBI Gene Gm26653 ENTREZGENE
PhenoGen Gm26653 PhenoGen
RNAcentral URS0000788869 RNACentral