Vmn2r24 (vomeronasal 2, receptor 24) - Rat Genome Database

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Gene: Vmn2r24 (vomeronasal 2, receptor 24) Mus musculus
Analyze
No known orthologs.
Symbol: Vmn2r24
Name: vomeronasal 2, receptor 24
RGD ID: 1619807
MGI Page MGI
Description: Predicted to enable G protein-coupled receptor activity. Predicted to be active in plasma membrane.
Type: protein-coding
RefSeq Status: INFERRED
Previously known as: EG243628; vomeronasal receptor Vmn2r24
RGD Orthologs
Alliance Orthologs
More Info homologs ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm396123,755,930 - 123,793,239 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl6123,755,838 - 123,801,871 (+)EnsemblGRCm39 Ensembl
GRCm386123,778,971 - 123,816,280 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl6123,778,879 - 123,824,912 (+)EnsemblGRCm38mm10GRCm38
MGSCv376123,728,989 - 123,766,298 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv366123,744,590 - 123,781,899 (+)NCBIMGSCv36mm8
Celera6125,468,286 - 125,505,588 (+)NCBICelera
Cytogenetic Map6F2NCBI
cM Map658.82NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:16805845   PMID:17382427   PMID:21873635  


Genomics

Variants

.
Variants in Vmn2r24
2227 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:56
Count of miRNA genes:55
Interacting mature miRNAs:56
Transcripts:ENSMUST00000075095
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142079Skmw15_mskeletal muscle weight 15 (mouse)Not determined6116829851149588044Mouse
10043864T2dm4sa_mtype 2 diabetes mellitus 4 in SMXA RI mice (mouse)Not determined683690851146954059Mouse
11252138Clas1_mcarcinogen-induced lung adenoma susceptibility 1 (mouse)6112246918146954059Mouse
1300887Pabr1_mplasma apolipoprotein B (human) regulator 1 (mouse)Not determined6103754405136400690Mouse
1301915Chab3_mcholesterol absorption 3 (mouse)Not determined698908709132916997Mouse
1301083Bhr5_mbronchial hyperresponsiveness 5 (mouse)Not determined6115694477132578150Mouse
1301658Radpf3_mradiation pulmonary fibrosis 3 (mouse)Not determined6115219814146330736Mouse
10043923Bhr7_mbronchial hyperresponsiveness 7 (mouse)Not determined698219814132219938Mouse
4141940W6q5_mweight 6 weeks QTL 5 (mouse)Not determined96632912146535124Mouse
4140980Mvwf2_mmodifier of von Willebrand factor 2 (mouse)Not determined114345693145601739Mouse
4142259Tabw2_mtally ho associated body weight 2 (mouse)Not determined46912919136400690Mouse
25314319Histh6_mhistamine hypersensitivity 6 (mouse)648696934125336963Mouse
4141295Rua_mraffinose acetate tasting (mouse)Not determined115546805149549364Mouse
25314320Histh5_mhistamine hypersensitivity 5 (mouse)648696934148351498Mouse
1301509Sluc3_msusceptibility to lung cancer 3 (mouse)Not determined6104480321127019938Mouse
1301962Eila2_methanol induced locomotor activity 2 (mouse)Not determined648703490125333748Mouse
1301518Bbaa5_mB.burgdorferi-associated arthritis 5 (mouse)Not determined698483798145881170Mouse
11353842Bmiq4_mbody mass index QTL 4 (mouse)692584287146330736Mouse
1302131Bmd8_mbone mineral density 8 (mouse)Not determined699132089133132228Mouse
10412157Fl1n_mfatty liver 1 in NSY (mouse)Not determined645290993128811995Mouse
26884414Bzwq12_mbi-zygomatic width QTL 12, 16 week (mouse)63400000139076998Mouse
1357555Tesq2_mtestis weight QTL 2 (mouse)Not determined696632912146535124Mouse
10043891Tilss4_mTNF-induced lethal shock susceptibility 3 (mouse)Not determined6112246918125333748Mouse
1301244Ichs_mimmediate cutaneous hypersensitivity QTL (mouse)Not determined690772571124772807Mouse
4142416Egq11_mearly growth QTL 11 (mouse)Not determined96632912146535124Mouse
1301923Lith6_mlithogenic gene 6 (mouse)Not determined698694477132694676Mouse
10412207Cypr5_mcytokine production 5 (mouse)Not determined6110815180144815323Mouse
1300704Cia3_mcollagen induced arthritis QTL 3 (mouse)Not determined696324286130324483Mouse
1301152Athsq2_matherosclerosis susceptibility QTL 2 (mouse)Not determined6117059949149588044Mouse
13463481Mcvq14_mmean corpuscular volume QTL 14 (mouse)6111142448145142541Mouse
1301927Etohcta6_methanol conditioned taste aversion 6 (mouse)Not determined6115578005149578150Mouse
4141194Cyx_mcycloheximide tasting (mouse)Not determined115546805149549364Mouse
4141064Ath37_matherosclerosis 37 (mouse)Not determined6116641858128495988Mouse
1357806Aaj3_manxiety in A/J 3 (mouse)Not determined6104480321136400690Mouse
13506930Recrq9_mrecombination rate in male meiosis QTL 9 (mouse)673476983134676963Mouse
4141889Qui_mquinine sensitivity, taste (mouse)Not determined115546805149549364Mouse
1301292Cfbw2_mcystic fibrosis body weight 2 (mouse)Not determined694981612128981699Mouse
11040599Lmr4b_mleishmaniasis resistance 4b (mouse)696324286130324483Mouse
1301804Bulb2_mbulb size 2 (mouse)Not determined6120416806149588044Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000075095   ⟹   ENSMUSP00000074602
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6123,755,838 - 123,801,871 (+)Ensembl
GRCm38.p6 Ensembl6123,778,879 - 123,824,912 (+)Ensembl
Ensembl Acc Id: ENSMUST00000232985   ⟹   ENSMUSP00000156600
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6123,755,838 - 123,801,871 (+)Ensembl
GRCm38.p6 Ensembl6123,778,879 - 123,824,912 (+)Ensembl
Ensembl Acc Id: ENSMUST00000233759   ⟹   ENSMUSP00000156764
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl6123,755,838 - 123,801,871 (+)Ensembl
GRCm38.p6 Ensembl6123,778,879 - 123,824,912 (+)Ensembl
RefSeq Acc Id: NM_001104639   ⟹   NP_001098109
RefSeq Status: INFERRED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm396123,755,930 - 123,793,239 (+)NCBI
GRCm386123,778,971 - 123,816,280 (+)ENTREZGENE
MGSCv376123,728,989 - 123,766,298 (+)RGD
Celera6125,468,286 - 125,505,588 (+)RGD
cM Map6 ENTREZGENE
Sequence:
Protein Sequences
Protein RefSeqs NP_001098109 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein EDK99722 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000074602
  ENSMUSP00000074602.6
  ENSMUSP00000156600.2
  ENSMUSP00000156764.2
RefSeq Acc Id: NP_001098109   ⟸   NM_001104639
- Peptide Label: precursor
- UniProtKB: D3YUI0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000156764   ⟸   ENSMUST00000233759
Ensembl Acc Id: ENSMUSP00000074602   ⟸   ENSMUST00000075095
Ensembl Acc Id: ENSMUSP00000156600   ⟸   ENSMUST00000232985
Protein Domains
G-protein coupled receptors family 3 profile   Receptor ligand binding region

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D3YUI0-F1-model_v2 AlphaFold D3YUI0 1-854 view protein structure


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:3647530 AgrOrtholog
Ensembl Genes ENSMUSG00000072780 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000075095 ENTREZGENE
  ENSMUST00000075095.7 UniProtKB/TrEMBL
  ENSMUST00000232985.2 UniProtKB/TrEMBL
  ENSMUST00000233759.2 UniProtKB/TrEMBL
Gene3D-CATH 2.10.50.30 UniProtKB/TrEMBL
  3.40.50.2300 UniProtKB/TrEMBL
InterPro ANF_lig-bd_rcpt UniProtKB/TrEMBL
  GPCR_3 UniProtKB/TrEMBL
  GPCR_3_9-Cys_dom UniProtKB/TrEMBL
  GPCR_3_9-Cys_sf UniProtKB/TrEMBL
  GPCR_3_C UniProtKB/TrEMBL
  GPCR_3_Ca_sens_rcpt-rel UniProtKB/TrEMBL
  GPCR_3_CS UniProtKB/TrEMBL
  GPCR_3_vmron_rcpt_2 UniProtKB/TrEMBL
  Peripla_BP_I UniProtKB/TrEMBL
KEGG Report mmu:243628 UniProtKB/TrEMBL
MGD MGI:3647530 ENTREZGENE
NCBI Gene 243628 ENTREZGENE
PANTHER PTHR24061 UniProtKB/TrEMBL
  VOMERONASAL 2, RECEPTOR 19-RELATED UniProtKB/TrEMBL
Pfam 7tm_3 UniProtKB/TrEMBL
  ANF_receptor UniProtKB/TrEMBL
  NCD3G UniProtKB/TrEMBL
PhenoGen Vmn2r24 PhenoGen
PRINTS GPCRMGR UniProtKB/TrEMBL
  VOMERONASL2R UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F3_3 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F3_4 UniProtKB/TrEMBL
Superfamily-SCOP SSF53822 UniProtKB/TrEMBL
UniProt A0A3B2WCN3_MOUSE UniProtKB/TrEMBL
  A0A3B2WCZ3_MOUSE UniProtKB/TrEMBL
  D3YUI0 ENTREZGENE, UniProtKB/TrEMBL